3 import jalview.jbgui.*;
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4 import jalview.schemes.*;
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5 import jalview.datamodel.*;
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6 import java.awt.event.*;
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7 import javax.swing.event.*;
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8 import javax.swing.*;
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11 public class SliderPanel extends GSliderPanel
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14 boolean forConservation = true;
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17 static JInternalFrame conservationSlider;
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18 static JInternalFrame PIDSlider;
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20 public static int setConservationSlider(AlignmentPanel ap, ColourSchemeI cs, String source)
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22 SliderPanel sp = null;
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23 ConservationColourScheme ccs = (ConservationColourScheme)cs;
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24 int value = ccs.inc;
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26 if(conservationSlider == null)
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28 sp = new SliderPanel(ap, value, true, cs);
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29 conservationSlider = new JInternalFrame();
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30 conservationSlider.setContentPane(sp);
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31 conservationSlider.setLayer(JLayeredPane.PALETTE_LAYER);
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35 sp = (SliderPanel)conservationSlider.getContentPane();
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40 conservationSlider.setTitle("Conservation Colour Increment ("+source+")");
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41 if(ap.av.alignment.getGroups()!=null)
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42 sp.setAllGroupsCheckEnabled( true );
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44 sp.setAllGroupsCheckEnabled( false);
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46 return sp.getValue();
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49 public static void showConservationSlider()
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52 PIDSlider.setClosed(true);
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54 }catch(Exception ex){}
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57 if(!conservationSlider.isVisible())
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59 Desktop.addInternalFrame(conservationSlider, conservationSlider.getTitle(), 420, 90, false);
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60 conservationSlider.addInternalFrameListener(new javax.swing.event.
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61 InternalFrameAdapter()
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63 public void internalFrameClosed(javax.swing.event.InternalFrameEvent e)
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65 conservationSlider = null;
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68 conservationSlider.setLayer(JLayeredPane.PALETTE_LAYER);
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73 public static int setPIDSliderSource(AlignmentPanel ap, ColourSchemeI cs, String source)
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75 SliderPanel pid = null;
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76 if(PIDSlider == null)
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78 pid = new SliderPanel(ap, 50, false, cs);
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79 PIDSlider = new JInternalFrame();
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80 PIDSlider.setContentPane(pid);
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81 PIDSlider.setLayer(JLayeredPane.PALETTE_LAYER);
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85 pid = (SliderPanel)PIDSlider.getContentPane();
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88 PIDSlider.setTitle("Percentage Identity Threshold ("+source+")");
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90 if (ap.av.alignment.getGroups() != null)
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91 pid.setAllGroupsCheckEnabled(true);
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93 pid.setAllGroupsCheckEnabled(false);
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95 return pid.getValue();
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99 public static void showPIDSlider()
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102 conservationSlider.setClosed(true);
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103 conservationSlider = null;
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104 }catch(Exception ex){}
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106 if(!PIDSlider.isVisible())
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108 Desktop.addInternalFrame(PIDSlider, PIDSlider.getTitle(), 420, 90, false);
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109 PIDSlider.setLayer(JLayeredPane.PALETTE_LAYER);
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110 PIDSlider.addInternalFrameListener(new javax.swing.event.
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111 InternalFrameAdapter()
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113 public void internalFrameClosed(javax.swing.event.InternalFrameEvent e)
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118 PIDSlider.setLayer(JLayeredPane.PALETTE_LAYER);
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124 public SliderPanel(AlignmentPanel ap, int value, boolean forConserve, ColourSchemeI cs)
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128 forConservation = forConserve;
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129 undoButton.setVisible(false);
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130 applyButton.setVisible(false);
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131 if(forConservation)
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133 label.setText("Enter value to increase conservation visibility");
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134 slider.setMinimum(0);
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135 slider.setMaximum(50);
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139 label.setText("Enter % identity above which to colour residues");
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140 slider.setMinimum(0);
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141 slider.setMaximum(100);
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146 slider.addChangeListener( new ChangeListener()
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148 public void stateChanged(ChangeEvent evt)
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150 valueField.setText( slider.getValue()+"" );
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151 valueChanged( slider.getValue() );
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155 slider.setValue(value);
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156 valueField.setText(value+"");
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159 public void valueChanged(int i)
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164 ColourSchemeI toChange = null;
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165 Vector allGroups = null;
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166 int groupIndex = 0;
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168 if(allGroupsCheck.isSelected())
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170 allGroups = ap.av.alignment.getGroups();
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171 groupIndex = allGroups.size()-1;
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177 while( groupIndex > -1 )
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179 if(allGroups!=null)
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180 toChange = ((SequenceGroup)allGroups.get(groupIndex)).cs;
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182 if (forConservation)
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184 if (toChange instanceof ConservationColourScheme)
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185 ( (ConservationColourScheme) toChange).inc = i;
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189 if (toChange.canThreshold())
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190 ( (ResidueColourScheme) toChange).setThreshold(i);
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196 ap.seqPanel.repaint();
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200 public void setAllGroupsCheckEnabled(boolean b)
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202 allGroupsCheck.setEnabled(b);
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206 public void valueField_actionPerformed(ActionEvent e)
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209 int i = Integer.parseInt(valueField.getText());
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210 slider.setValue(i);
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212 catch(Exception ex)
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214 valueField.setText( slider.getValue()+"" );
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218 public void setValue(int value)
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220 slider.setValue(value);
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222 public int getValue()
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224 return Integer.parseInt(valueField.getText());
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