2 * Jalview - A Sequence Alignment Editor and Viewer
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3 * Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
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5 * This program is free software; you can redistribute it and/or
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6 * modify it under the terms of the GNU General Public License
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7 * as published by the Free Software Foundation; either version 2
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8 * of the License, or (at your option) any later version.
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10 * This program is distributed in the hope that it will be useful,
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11 * but WITHOUT ANY WARRANTY; without even the implied warranty of
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12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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13 * GNU General Public License for more details.
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15 * You should have received a copy of the GNU General Public License
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16 * along with this program; if not, write to the Free Software
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17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
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20 package jalview.appletgui;
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23 import java.awt.event.*;
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25 import jalview.datamodel.*;
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26 import jalview.io.*;
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27 import jalview.jbappletgui.*;
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29 public class CutAndPasteTransfer
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30 extends GCutAndPasteTransfer
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32 public CutAndPasteTransfer(boolean forImport)
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38 buttonPanel.setVisible(false);
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42 public String getText()
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44 return textarea.getText();
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47 public void setText(String text)
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49 textarea.setText(text);
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52 protected void ok_actionPerformed(ActionEvent e)
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54 String text = getText();
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55 int length = text.length();
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56 textarea.append("\n");
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57 if(textarea.getText().length()==length)
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59 String warning = "\n\n#################################################\n"
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60 +"WARNING!! THIS IS THE MAXIMUM SIZE OF TEXTAREA!!\n"
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61 +"\nCAN'T INPUT FULL ALIGNMENT"
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62 +"\n\nYOU MUST DELETE THIS WARNING TO CONTINUE"
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63 +"\n\nMAKE SURE LAST SEQUENCE PASTED IS COMPLETE"
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64 +"\n#################################################\n";
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65 textarea.setText(text.substring(0, text.length()-warning.length())
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68 textarea.setCaretPosition(text.length());
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72 SequenceI[] sequences = null;
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74 String format = IdentifyFile.Identify(text, "Paste");
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75 sequences = FormatAdapter.readFile(text, "Paste", format);
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77 if (sequences != null)
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79 AlignFrame af = new AlignFrame(new Alignment(sequences));
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80 jalview.bin.JalviewLite.addFrame(af, "Cut & Paste input - " + format,
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81 AlignFrame.NEW_WINDOW_WIDTH,
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82 AlignFrame.NEW_WINDOW_HEIGHT);
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83 af.statusBar.setText("Successfully pasted alignment file");
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86 Frame frame = (Frame)this.getParent();
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87 frame.setVisible(false);
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90 protected void cancel_actionPerformed(ActionEvent e)
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92 Frame frame = (Frame)this.getParent();
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93 frame.setVisible(false);
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