1 // do something groovy in jalview
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2 print "Hello World.\n";
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3 def alf = Jalview.getAlignframes();
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6 // ala is an jalview.gui.AlignFrame object
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7 print ala.getTitle()+"\n";
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8 // get the parent jalview.datamodel.Alignment from the alignment viewport
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9 def alignment = ala.viewport.alignment;
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10 // get the first sequence from the jalview.datamodel.Alignment object
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11 def seq = alignment.getSequenceAt(0);
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