1 <h2><a href="jalviewLiteJs.html">JalviewLite API</a> Demo</h2>
2 <p>Using the Javascript API to fill out forms using data from JalviewLite
3 <br/>Click the Javascript buttons below to interact with the Applet
4 instance on the page.</p>
5 View the source in your browser to see how it has been done. <br/>
6 <a name="api">View the full <a href="jalviewLiteJs.html">JalviewLite API documentation</a>.</a>
7 <applet code="jalview.bin.JalviewLite" width="0" height="0"
8 archive="${content.jvl},${content.jmol}" name="Jalview">
9 <#if content.permissions?exists><param name="permissions" value="${content.permissions}"/></#if>
10 <param name="file" value="plantfdx.fa"/>
11 <param name="features" value="plantfdx.features"/>
12 <param name="wrap" value="true"/>
13 <param name="showAnnotation" value="false"/>
14 <param name="windowHeight" value="500"/>
15 <param name="windowWidth" value="650"/>
16 <param name="showFullId" value="false"/>
17 <param name="linkLabel_1" value="Uniprot"/>
18 <param name="linkUrl_1"
19 value="http://www.uniprot.org/uniprot/$SEQUENCE_ID$"/>
20 <param name="linkLabel_2" value="Expasy">
21 <param name="linkUrl_2"
22 value="http://us.expasy.org/cgi-bin/niceprot.pl?$SEQUENCE_ID$"/>
23 <param name="hidefeaturegroups" value="uniprot" />
24 <param name="showbutton" value="false" />
26 <form name="exampleForm"><br/>
28 <center><strong>Using the Jalview Applet for Input
29 to an HTML Form</strong></center>
30 <div align="center"><input type="button"
31 onClick="document.forms.exampleForm.exampleTextarea.value=document.applets.Jalview.getAlignment('fasta', 'false')"
32 value="Fill Form from Jalview" /> <br/>
34 <textarea name="exampleTextarea" cols="55" rows="9"></textarea></div>
36 <center><strong>Make a new View and Get and Set
37 Group Display List</strong></center>
38 <form name="groupForm">
39 <div align="center"><input type="button"
40 onClick="document.forms.groupForm.groups.value=document.applets.Jalview.getFeatureGroups()"
41 value="Get groups" /> <input type="button"
42 onClick="document.applets.Jalview.newView()" value="new View" /> <br/>
43 <textarea name="groups" cols="55" rows="9"></textarea> <br/>
45 onClick="document.applets.Jalview.setFeatureGroupState(document.forms.groupForm.groups.value, true)"
46 value="Display groups" /> <input type="button"
47 onClick="document.applets.Jalview.setFeatureGroupState(document.forms.groupForm.groups.value, false)"
48 value="Hide groups" /></div>