forester/aptx/aptx_example_files/apaf_with_vector_data.xml

   1 <?xml version="1.0" encoding="UTF-8"?>\r
   2 <phyloxml xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.phyloxml.org http://www.phyloxml.org/1.10/phyloxml.xsd" xmlns="http://www.phyloxml.org">\r
   3 <phylogeny rooted="true">\r
   4   <clade>\r
   5     <clade>\r
   6       <branch_length>0.18105</branch_length>\r
   7       <confidence type="unknown">89</confidence>\r
   8       <clade>\r
   9         <branch_length>0.07466</branch_length>\r
  10         <confidence type="unknown">32</confidence>\r
  11         <clade>\r
  12           <branch_length>0.26168</branch_length>\r
  13           <confidence type="unknown">100</confidence>\r
  14           <clade>\r
  15             <branch_length>0.22058</branch_length>\r
  16             <confidence type="unknown">89</confidence>\r
  17             <clade>\r
  18               <branch_length>0.28901</branch_length>\r
  19               <confidence type="unknown">100</confidence>\r
  20               <clade>\r
  21                 <branch_length>0.06584</branch_length>\r
  22                 <confidence type="unknown">100</confidence>\r
  23                 <clade>\r
  24                   <branch_length>0.02309</branch_length>\r
  25                   <confidence type="unknown">43</confidence>\r
  26                   <clade>\r
  27                     <branch_length>0.0746</branch_length>\r
  28                     <confidence type="unknown">100</confidence>\r
  29                     <clade>\r
  30                       <branch_length>0.02365</branch_length>\r
  31                       <confidence type="unknown">88</confidence>\r
  32                       <clade>\r
  33                         <name>22_MOUSE</name>\r
  34                         <branch_length>0.05998</branch_length>\r
  35                         <taxonomy>\r
  36                           <code>MOUSE</code>\r
  37                         </taxonomy>\r
  38                         <sequence>\r
  39                           <domain_architecture length="1249">\r
  40                             <domain from="6" to="90" confidence="7.0E-26">CARD</domain>\r
  41                             <domain from="109" to="414" confidence="7.2E-117">NB-ARC</domain>\r
  42                             <domain from="605" to="643" confidence="2.4E-6">WD40</domain>\r
  43                             <domain from="647" to="685" confidence="1.1E-12">WD40</domain>\r
  44                             <domain from="689" to="729" confidence="2.4E-7">WD40</domain>\r
  45                             <domain from="733" to="771" confidence="4.7E-14">WD40</domain>\r
  46                             <domain from="872" to="910" confidence="2.5E-8">WD40</domain>\r
  47                             <domain from="993" to="1031" confidence="4.6E-6">WD40</domain>\r
  48                             <domain from="1075" to="1113" confidence="6.3E-7">WD40</domain>\r
  49                             <domain from="1117" to="1155" confidence="1.4E-7">WD40</domain>\r
  50                             <domain from="1168" to="1204" confidence="0.3">WD40</domain>\r
  51                           </domain_architecture>\r
  52                         </sequence>\r
  53                         <property ref="vector:index=0" datatype="xsd:decimal" applies_to="node">0.78371114</property>\r
  54                         <property ref="vector:index=1" datatype="xsd:decimal" applies_to="node">0.59750026</property>\r
  55                         <property ref="vector:index=2" datatype="xsd:decimal" applies_to="node">0.5770906</property>\r
  56                         <property ref="vector:index=3" datatype="xsd:decimal" applies_to="node">0.052005768</property>\r
  57                         <property ref="vector:index=4" datatype="xsd:decimal" applies_to="node">0.2665705</property>\r
  58                         <property ref="vector:index=5" datatype="xsd:decimal" applies_to="node">0.8123515</property>\r
  59                         <property ref="vector:index=6" datatype="xsd:decimal" applies_to="node">0.65870786</property>\r
  60                         <property ref="vector:index=7" datatype="xsd:decimal" applies_to="node">0.35139543</property>\r
  61                         <property ref="vector:index=8" datatype="xsd:decimal" applies_to="node">0.9016194</property>\r
  62                         <property ref="vector:index=9" datatype="xsd:decimal" applies_to="node">0.6987117</property>\r
  63                         <property ref="vector:index=10" datatype="xsd:decimal" applies_to="node">0.26577407</property>\r
  64                         <property ref="vector:index=11" datatype="xsd:decimal" applies_to="node">0.5997761</property>\r
  65                         <property ref="vector:index=12" datatype="xsd:decimal" applies_to="node">0.6851548</property>\r
  66                         <property ref="vector:index=13" datatype="xsd:decimal" applies_to="node">0.15142941</property>\r
  67                         <property ref="vector:index=14" datatype="xsd:decimal" applies_to="node">0.6336282</property>\r
  68                         <property ref="vector:index=15" datatype="xsd:decimal" applies_to="node">0.8054241</property>\r
  69                         <property ref="vector:index=16" datatype="xsd:decimal" applies_to="node">0.10833871</property>\r
  70                         <property ref="vector:index=17" datatype="xsd:decimal" applies_to="node">0.2409839</property>\r
  71                         <property ref="vector:index=18" datatype="xsd:decimal" applies_to="node">0.15210575</property>\r
  72                         <property ref="vector:index=19" datatype="xsd:decimal" applies_to="node">0.26799864</property>\r
  73                         <property ref="vector:index=20" datatype="xsd:decimal" applies_to="node">0.1512199</property>\r
  74                         <property ref="vector:index=21" datatype="xsd:decimal" applies_to="node">0.7610189</property>\r
  75                         <property ref="vector:index=22" datatype="xsd:decimal" applies_to="node">0.13341868</property>\r
  76                         <property ref="vector:index=23" datatype="xsd:decimal" applies_to="node">0.1839819</property>\r
  77                         <property ref="vector:index=24" datatype="xsd:decimal" applies_to="node">0.30569518</property>\r
  78                         <property ref="vector:index=25" datatype="xsd:decimal" applies_to="node">0.6384666</property>\r
  79                         <property ref="vector:index=26" datatype="xsd:decimal" applies_to="node">0.4255718</property>\r
  80                         <property ref="vector:index=27" datatype="xsd:decimal" applies_to="node">0.39877522</property>\r
  81                         <property ref="vector:index=28" datatype="xsd:decimal" applies_to="node">0.42274952</property>\r
  82                         <property ref="vector:index=29" datatype="xsd:decimal" applies_to="node">0.27579862</property>\r
  83                       </clade>\r
  84                       <clade>\r
  85                         <name>Apaf-1_HUMAN</name>\r
  86                         <branch_length>0.01825</branch_length>\r
  87                         <taxonomy>\r
  88                           <code>HUMAN</code>\r
  89                         </taxonomy>\r
  90                         <sequence>\r
  91                           <domain_architecture length="1248">\r
  92                             <domain from="6" to="90" confidence="1.1E-25">CARD</domain>\r
  93                             <domain from="109" to="414" confidence="3.0E-134">NB-ARC</domain>\r
  94                             <domain from="605" to="643" confidence="8.5E-6">WD40</domain>\r
  95                             <domain from="647" to="685" confidence="2.5E-11">WD40</domain>\r
  96                             <domain from="689" to="729" confidence="2.4E-8">WD40</domain>\r
  97                             <domain from="733" to="771" confidence="3.6E-14">WD40</domain>\r
  98                             <domain from="872" to="910" confidence="3.8E-8">WD40</domain>\r
  99                             <domain from="1075" to="1113" confidence="4.0E-7">WD40</domain>\r
 100                             <domain from="1117" to="1155" confidence="5.9E-8">WD40</domain>\r
 101                           </domain_architecture>\r
 102                         </sequence>\r
 103                         <property ref="vector:index=0" datatype="xsd:decimal" applies_to="node">0.94431967</property>\r
 104                         <property ref="vector:index=1" datatype="xsd:decimal" applies_to="node">0.120084286</property>\r
 105                         <property ref="vector:index=2" datatype="xsd:decimal" applies_to="node">0.43711078</property>\r
 106                         <property ref="vector:index=3" datatype="xsd:decimal" applies_to="node">0.32142657</property>\r
 107                         <property ref="vector:index=4" datatype="xsd:decimal" applies_to="node">0.23647976</property>\r
 108                         <property ref="vector:index=5" datatype="xsd:decimal" applies_to="node">0.9949972</property>\r
 109                         <property ref="vector:index=6" datatype="xsd:decimal" applies_to="node">0.12675625</property>\r
 110                         <property ref="vector:index=7" datatype="xsd:decimal" applies_to="node">0.77764076</property>\r
 111                         <property ref="vector:index=8" datatype="xsd:decimal" applies_to="node">0.14062494</property>\r
 112                         <property ref="vector:index=9" datatype="xsd:decimal" applies_to="node">0.56931627</property>\r
 113                         <property ref="vector:index=10" datatype="xsd:decimal" applies_to="node">0.35632038</property>\r
 114                         <property ref="vector:index=11" datatype="xsd:decimal" applies_to="node">0.4051305</property>\r
 115                         <property ref="vector:index=12" datatype="xsd:decimal" applies_to="node">0.7639063</property>\r
 116                         <property ref="vector:index=13" datatype="xsd:decimal" applies_to="node">0.48071146</property>\r
 117                         <property ref="vector:index=14" datatype="xsd:decimal" applies_to="node">0.2763313</property>\r
 118                         <property ref="vector:index=15" datatype="xsd:decimal" applies_to="node">0.85911644</property>\r
 119                         <property ref="vector:index=16" datatype="xsd:decimal" applies_to="node">0.9602677</property>\r
 120                         <property ref="vector:index=17" datatype="xsd:decimal" applies_to="node">0.24123877</property>\r
 121                         <property ref="vector:index=18" datatype="xsd:decimal" applies_to="node">0.70141125</property>\r
 122                         <property ref="vector:index=19" datatype="xsd:decimal" applies_to="node">0.075105906</property>\r
 123                         <property ref="vector:index=20" datatype="xsd:decimal" applies_to="node">0.46799052</property>\r
 124                         <property ref="vector:index=21" datatype="xsd:decimal" applies_to="node">0.6094217</property>\r
 125                         <property ref="vector:index=22" datatype="xsd:decimal" applies_to="node">0.0703153</property>\r
 126                         <property ref="vector:index=23" datatype="xsd:decimal" applies_to="node">0.93354744</property>\r
 127                         <property ref="vector:index=24" datatype="xsd:decimal" applies_to="node">0.8638522</property>\r
 128                         <property ref="vector:index=25" datatype="xsd:decimal" applies_to="node">0.072788</property>\r
 129                         <property ref="vector:index=26" datatype="xsd:decimal" applies_to="node">0.6522666</property>\r
 130                         <property ref="vector:index=27" datatype="xsd:decimal" applies_to="node">0.8841237</property>\r
 131                         <property ref="vector:index=28" datatype="xsd:decimal" applies_to="node">0.6158376</property>\r
 132                         <property ref="vector:index=29" datatype="xsd:decimal" applies_to="node">0.109466314</property>\r
 133                       </clade>\r
 134                     </clade>\r
 135                     <clade>\r
 136                       <name>12_CANFA</name>\r
 137                       <branch_length>0.04683</branch_length>\r
 138                       <taxonomy>\r
 139                         <code>CANFA</code>\r
 140                       </taxonomy>\r
 141                       <sequence>\r
 142                         <domain_architecture length="1153">\r
 143                           <domain from="6" to="90" confidence="4.5E-22">CARD</domain>\r
 144                           <domain from="110" to="415" confidence="4.0E-119">NB-ARC</domain>\r
 145                           <domain from="597" to="635" confidence="3.9E-5">WD40</domain>\r
 146                           <domain from="639" to="677" confidence="2.5E-11">WD40</domain>\r
 147                           <domain from="681" to="721" confidence="1.8E-7">WD40</domain>\r
 148                           <domain from="725" to="763" confidence="9.4E-13">WD40</domain>\r
 149                           <domain from="889" to="927" confidence="1.1E-6">WD40</domain>\r
 150                           <domain from="971" to="1009" confidence="1.7E-7">WD40</domain>\r
 151                           <domain from="1013" to="1051" confidence="1.9E-7">WD40</domain>\r
 152                         </domain_architecture>\r
 153                       </sequence>\r
 154                       <property ref="vector:index=0" datatype="xsd:decimal" applies_to="node">0.86392474</property>\r
 155                       <property ref="vector:index=1" datatype="xsd:decimal" applies_to="node">0.8546202</property>\r
 156                       <property ref="vector:index=2" datatype="xsd:decimal" applies_to="node">0.19305587</property>\r
 157                       <property ref="vector:index=3" datatype="xsd:decimal" applies_to="node">0.68876684</property>\r
 158                       <property ref="vector:index=4" datatype="xsd:decimal" applies_to="node">0.009067595</property>\r
 159                       <property ref="vector:index=5" datatype="xsd:decimal" applies_to="node">0.6494087</property>\r
 160                       <property ref="vector:index=6" datatype="xsd:decimal" applies_to="node">0.42517924</property>\r
 161                       <property ref="vector:index=7" datatype="xsd:decimal" applies_to="node">0.9378417</property>\r
 162                       <property ref="vector:index=8" datatype="xsd:decimal" applies_to="node">0.46136755</property>\r
 163                       <property ref="vector:index=9" datatype="xsd:decimal" applies_to="node">0.042372644</property>\r
 164                       <property ref="vector:index=10" datatype="xsd:decimal" applies_to="node">0.92733294</property>\r
 165                       <property ref="vector:index=11" datatype="xsd:decimal" applies_to="node">0.34237885</property>\r
 166                       <property ref="vector:index=12" datatype="xsd:decimal" applies_to="node">0.24532443</property>\r
 167                       <property ref="vector:index=13" datatype="xsd:decimal" applies_to="node">0.66299963</property>\r
 168                       <property ref="vector:index=14" datatype="xsd:decimal" applies_to="node">0.33107042</property>\r
 169                       <property ref="vector:index=15" datatype="xsd:decimal" applies_to="node">0.07731497</property>\r
 170                       <property ref="vector:index=16" datatype="xsd:decimal" applies_to="node">0.30042273</property>\r
 171                       <property ref="vector:index=17" datatype="xsd:decimal" applies_to="node">0.47739798</property>\r
 172                       <property ref="vector:index=18" datatype="xsd:decimal" applies_to="node">0.52710986</property>\r
 173                       <property ref="vector:index=19" datatype="xsd:decimal" applies_to="node">0.6578565</property>\r
 174                       <property ref="vector:index=20" datatype="xsd:decimal" applies_to="node">0.06098163</property>\r
 175                       <property ref="vector:index=21" datatype="xsd:decimal" applies_to="node">0.4838441</property>\r
 176                       <property ref="vector:index=22" datatype="xsd:decimal" applies_to="node">0.9482852</property>\r
 177                       <property ref="vector:index=23" datatype="xsd:decimal" applies_to="node">0.65639925</property>\r
 178                       <property ref="vector:index=24" datatype="xsd:decimal" applies_to="node">0.67415756</property>\r
 179                       <property ref="vector:index=25" datatype="xsd:decimal" applies_to="node">0.12140423</property>\r
 180                       <property ref="vector:index=26" datatype="xsd:decimal" applies_to="node">0.7471696</property>\r
 181                       <property ref="vector:index=27" datatype="xsd:decimal" applies_to="node">0.60758793</property>\r
 182                       <property ref="vector:index=28" datatype="xsd:decimal" applies_to="node">0.48946</property>\r
 183                       <property ref="vector:index=29" datatype="xsd:decimal" applies_to="node">0.66712695</property>\r
 184                     </clade>\r
 185                   </clade>\r
 186                   <clade>\r
 187                     <name>11_CHICK</name>\r
 188                     <branch_length>0.15226</branch_length>\r
 189                     <taxonomy>\r
 190                       <code>CHICK</code>\r
 191                     </taxonomy>\r
 192                     <sequence>\r
 193                       <domain_architecture length="1207">\r
 194                         <domain from="6" to="90" confidence="3.6E-21">CARD</domain>\r
 195                         <domain from="109" to="414" confidence="3.6E-109">NB-ARC</domain>\r
 196                         <domain from="603" to="641" confidence="1.6E-4">WD40</domain>\r
 197                         <domain from="645" to="683" confidence="8.2E-11">WD40</domain>\r
 198                         <domain from="687" to="727" confidence="6.2E-10">WD40</domain>\r
 199                         <domain from="731" to="769" confidence="1.8E-11">WD40</domain>\r
 200                         <domain from="828" to="866" confidence="1.8">WD40</domain>\r
 201                         <domain from="993" to="1030" confidence="2.9E-4">WD40</domain>\r
 202                         <domain from="1034" to="1072" confidence="1.7E-8">WD40</domain>\r
 203                         <domain from="1076" to="1114" confidence="7.5E-9">WD40</domain>\r
 204                         <domain from="1127" to="1163" confidence="0.044">WD40</domain>\r
 205                       </domain_architecture>\r
 206                     </sequence>\r
 207                     <property ref="vector:index=0" datatype="xsd:decimal" applies_to="node">0.27570605</property>\r
 208                     <property ref="vector:index=1" datatype="xsd:decimal" applies_to="node">0.79773813</property>\r
 209                     <property ref="vector:index=2" datatype="xsd:decimal" applies_to="node">0.86639917</property>\r
 210                     <property ref="vector:index=3" datatype="xsd:decimal" applies_to="node">0.54980224</property>\r
 211                     <property ref="vector:index=4" datatype="xsd:decimal" applies_to="node">0.6056809</property>\r
 212                     <property ref="vector:index=5" datatype="xsd:decimal" applies_to="node">0.5477458</property>\r
 213                     <property ref="vector:index=6" datatype="xsd:decimal" applies_to="node">0.7970692</property>\r
 214                     <property ref="vector:index=7" datatype="xsd:decimal" applies_to="node">0.40449637</property>\r
 215                     <property ref="vector:index=8" datatype="xsd:decimal" applies_to="node">0.56888515</property>\r
 216                     <property ref="vector:index=9" datatype="xsd:decimal" applies_to="node">0.0076748133</property>\r
 217                     <property ref="vector:index=10" datatype="xsd:decimal" applies_to="node">0.965273</property>\r
 218                     <property ref="vector:index=11" datatype="xsd:decimal" applies_to="node">0.8407882</property>\r
 219                     <property ref="vector:index=12" datatype="xsd:decimal" applies_to="node">0.40233397</property>\r
 220                     <property ref="vector:index=13" datatype="xsd:decimal" applies_to="node">0.80927753</property>\r
 221                     <property ref="vector:index=14" datatype="xsd:decimal" applies_to="node">0.25404596</property>\r
 222                     <property ref="vector:index=15" datatype="xsd:decimal" applies_to="node">0.19826454</property>\r
 223                     <property ref="vector:index=16" datatype="xsd:decimal" applies_to="node">0.09308857</property>\r
 224                     <property ref="vector:index=17" datatype="xsd:decimal" applies_to="node">0.108256936</property>\r
 225                     <property ref="vector:index=18" datatype="xsd:decimal" applies_to="node">0.16306704</property>\r
 226                     <property ref="vector:index=19" datatype="xsd:decimal" applies_to="node">0.05542159</property>\r
 227                     <property ref="vector:index=20" datatype="xsd:decimal" applies_to="node">0.7933063</property>\r
 228                     <property ref="vector:index=21" datatype="xsd:decimal" applies_to="node">0.2952119</property>\r
 229                     <property ref="vector:index=22" datatype="xsd:decimal" applies_to="node">0.35354054</property>\r
 230                     <property ref="vector:index=23" datatype="xsd:decimal" applies_to="node">0.37332404</property>\r
 231                     <property ref="vector:index=24" datatype="xsd:decimal" applies_to="node">0.6615165</property>\r
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1003                   <taxonomy>\r
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1005                   </taxonomy>\r
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1008                       <domain from="49" to="356" confidence="9.0E-6">NB-ARC</domain>\r
1009                     </domain_architecture>\r
1010                   </sequence>\r
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1041                 </clade>\r
1042                 <clade>\r
1043                   <name>35_BRAFL</name>\r
1044                   <branch_length>0.08226</branch_length>\r
1045                   <taxonomy>\r
1046                     <code>BRAFL</code>\r
1047                   </taxonomy>\r
1048                   <sequence>\r
1049                     <domain_architecture length="753">\r
1050                       <domain from="25" to="105" confidence="0.16">DED</domain>\r
1051                       <domain from="113" to="409" confidence="1.1E-6">NB-ARC</domain>\r
1052                     </domain_architecture>\r
1053                   </sequence>\r
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1085               </clade>\r
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1087                 <name>8_BRAFL</name>\r
1088                 <branch_length>0.58563</branch_length>\r
1089                 <taxonomy>\r
1090                   <code>BRAFL</code>\r
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1093                   <domain_architecture length="916">\r
1094                     <domain from="58" to="369" confidence="8.4E-7">NB-ARC</domain>\r
1095                   </domain_architecture>\r
1096                 </sequence>\r
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1107                 <property ref="vector:index=10" datatype="xsd:decimal" applies_to="node">0.7383163</property>\r
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1116                 <property ref="vector:index=19" datatype="xsd:decimal" applies_to="node">0.10219842</property>\r
1117                 <property ref="vector:index=20" datatype="xsd:decimal" applies_to="node">0.93010026</property>\r
1118                 <property ref="vector:index=21" datatype="xsd:decimal" applies_to="node">0.18970132</property>\r
1119                 <property ref="vector:index=22" datatype="xsd:decimal" applies_to="node">0.48834926</property>\r
1120                 <property ref="vector:index=23" datatype="xsd:decimal" applies_to="node">0.10637838</property>\r
1121                 <property ref="vector:index=24" datatype="xsd:decimal" applies_to="node">0.7573042</property>\r
1122                 <property ref="vector:index=25" datatype="xsd:decimal" applies_to="node">0.3286727</property>\r
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1124                 <property ref="vector:index=27" datatype="xsd:decimal" applies_to="node">0.8346655</property>\r
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1126                 <property ref="vector:index=29" datatype="xsd:decimal" applies_to="node">0.3227895</property>\r
1127               </clade>\r
1128             </clade>\r
1129             <clade>\r
1130               <branch_length>0.28437</branch_length>\r
1131               <confidence type="unknown">84</confidence>\r
1132               <clade>\r
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1134                 <branch_length>0.71946</branch_length>\r
1135                 <taxonomy>\r
1136                   <code>NEMVE</code>\r
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1138                 <sequence>\r
1139                   <domain_architecture length="786">\r
1140                     <domain from="8" to="91" confidence="1.7E-17">DED</domain>\r
1141                     <domain from="8" to="85" confidence="0.37">PAAD_DAPIN</domain>\r
1142                     <domain from="90" to="388" confidence="6.8E-5">NB-ARC</domain>\r
1143                     <domain from="575" to="608" confidence="0.27">TPR_1</domain>\r
1144                     <domain from="657" to="690" confidence="0.22">TPR_2</domain>\r
1145                     <domain from="698" to="731" confidence="4.2E-5">TPR_2</domain>\r
1146                   </domain_architecture>\r
1147                 </sequence>\r
1148                 <property ref="vector:index=0" datatype="xsd:decimal" applies_to="node">0.9768569</property>\r
1149                 <property ref="vector:index=1" datatype="xsd:decimal" applies_to="node">0.9996147</property>\r
1150                 <property ref="vector:index=2" datatype="xsd:decimal" applies_to="node">0.8915258</property>\r
1151                 <property ref="vector:index=3" datatype="xsd:decimal" applies_to="node">0.046142817</property>\r
1152                 <property ref="vector:index=4" datatype="xsd:decimal" applies_to="node">0.31038904</property>\r
1153                 <property ref="vector:index=5" datatype="xsd:decimal" applies_to="node">0.88098776</property>\r
1154                 <property ref="vector:index=6" datatype="xsd:decimal" applies_to="node">0.2019102</property>\r
1155                 <property ref="vector:index=7" datatype="xsd:decimal" applies_to="node">0.49907905</property>\r
1156                 <property ref="vector:index=8" datatype="xsd:decimal" applies_to="node">0.6807198</property>\r
1157                 <property ref="vector:index=9" datatype="xsd:decimal" applies_to="node">0.3581037</property>\r
1158                 <property ref="vector:index=10" datatype="xsd:decimal" applies_to="node">0.98734415</property>\r
1159                 <property ref="vector:index=11" datatype="xsd:decimal" applies_to="node">0.013758063</property>\r
1160                 <property ref="vector:index=12" datatype="xsd:decimal" applies_to="node">0.2277906</property>\r
1161                 <property ref="vector:index=13" datatype="xsd:decimal" applies_to="node">0.6969632</property>\r
1162                 <property ref="vector:index=14" datatype="xsd:decimal" applies_to="node">0.13771409</property>\r
1163                 <property ref="vector:index=15" datatype="xsd:decimal" applies_to="node">0.2736014</property>\r
1164                 <property ref="vector:index=16" datatype="xsd:decimal" applies_to="node">0.87509215</property>\r
1165                 <property ref="vector:index=17" datatype="xsd:decimal" applies_to="node">0.44795954</property>\r
1166                 <property ref="vector:index=18" datatype="xsd:decimal" applies_to="node">0.037992775</property>\r
1167                 <property ref="vector:index=19" datatype="xsd:decimal" applies_to="node">0.8915226</property>\r
1168                 <property ref="vector:index=20" datatype="xsd:decimal" applies_to="node">0.5019486</property>\r
1169                 <property ref="vector:index=21" datatype="xsd:decimal" applies_to="node">0.09231347</property>\r
1170                 <property ref="vector:index=22" datatype="xsd:decimal" applies_to="node">0.8764624</property>\r
1171                 <property ref="vector:index=23" datatype="xsd:decimal" applies_to="node">0.6797758</property>\r
1172                 <property ref="vector:index=24" datatype="xsd:decimal" applies_to="node">0.19932872</property>\r
1173                 <property ref="vector:index=25" datatype="xsd:decimal" applies_to="node">0.9441761</property>\r
1174                 <property ref="vector:index=26" datatype="xsd:decimal" applies_to="node">0.76935184</property>\r
1175                 <property ref="vector:index=27" datatype="xsd:decimal" applies_to="node">0.11956686</property>\r
1176                 <property ref="vector:index=28" datatype="xsd:decimal" applies_to="node">0.2394998</property>\r
1177                 <property ref="vector:index=29" datatype="xsd:decimal" applies_to="node">0.013804674</property>\r
1178               </clade>\r
1179               <clade>\r
1180                 <name>21_NEMVE</name>\r
1181                 <branch_length>0.9571</branch_length>\r
1182                 <taxonomy>\r
1183                   <code>NEMVE</code>\r
1184                 </taxonomy>\r
1185                 <sequence>\r
1186                   <domain_architecture length="1563">\r
1187                     <domain from="234" to="317" confidence="2.3E-14">CARD</domain>\r
1188                     <domain from="238" to="318" confidence="0.5">Death</domain>\r
1189                     <domain from="329" to="619" confidence="0.022">NB-ARC</domain>\r
1190                     <domain from="906" to="939" confidence="0.17">TPR_1</domain>\r
1191                     <domain from="1326" to="1555" confidence="3.2E-26">RVT_1</domain>\r
1192                   </domain_architecture>\r
1193                 </sequence>\r
1194                 <property ref="vector:index=0" datatype="xsd:decimal" applies_to="node">0.99662143</property>\r
1195                 <property ref="vector:index=1" datatype="xsd:decimal" applies_to="node">0.43347305</property>\r
1196                 <property ref="vector:index=2" datatype="xsd:decimal" applies_to="node">0.7211908</property>\r
1197                 <property ref="vector:index=3" datatype="xsd:decimal" applies_to="node">0.44911522</property>\r
1198                 <property ref="vector:index=4" datatype="xsd:decimal" applies_to="node">0.68716383</property>\r
1199                 <property ref="vector:index=5" datatype="xsd:decimal" applies_to="node">0.87606186</property>\r
1200                 <property ref="vector:index=6" datatype="xsd:decimal" applies_to="node">0.8784068</property>\r
1201                 <property ref="vector:index=7" datatype="xsd:decimal" applies_to="node">0.072669804</property>\r
1202                 <property ref="vector:index=8" datatype="xsd:decimal" applies_to="node">0.8550648</property>\r
1203                 <property ref="vector:index=9" datatype="xsd:decimal" applies_to="node">0.70136636</property>\r
1204                 <property ref="vector:index=10" datatype="xsd:decimal" applies_to="node">0.43159175</property>\r
1205                 <property ref="vector:index=11" datatype="xsd:decimal" applies_to="node">0.83380276</property>\r
1206                 <property ref="vector:index=12" datatype="xsd:decimal" applies_to="node">0.511034</property>\r
1207                 <property ref="vector:index=13" datatype="xsd:decimal" applies_to="node">0.8191604</property>\r
1208                 <property ref="vector:index=14" datatype="xsd:decimal" applies_to="node">0.23653138</property>\r
1209                 <property ref="vector:index=15" datatype="xsd:decimal" applies_to="node">0.5067933</property>\r
1210                 <property ref="vector:index=16" datatype="xsd:decimal" applies_to="node">0.9720618</property>\r
1211                 <property ref="vector:index=17" datatype="xsd:decimal" applies_to="node">0.5100142</property>\r
1212                 <property ref="vector:index=18" datatype="xsd:decimal" applies_to="node">0.67442864</property>\r
1213                 <property ref="vector:index=19" datatype="xsd:decimal" applies_to="node">0.13204414</property>\r
1214                 <property ref="vector:index=20" datatype="xsd:decimal" applies_to="node">0.6132879</property>\r
1215                 <property ref="vector:index=21" datatype="xsd:decimal" applies_to="node">0.09224582</property>\r
1216                 <property ref="vector:index=22" datatype="xsd:decimal" applies_to="node">0.504281</property>\r
1217                 <property ref="vector:index=23" datatype="xsd:decimal" applies_to="node">0.8550317</property>\r
1218                 <property ref="vector:index=24" datatype="xsd:decimal" applies_to="node">0.37261397</property>\r
1219                 <property ref="vector:index=25" datatype="xsd:decimal" applies_to="node">0.9980992</property>\r
1220                 <property ref="vector:index=26" datatype="xsd:decimal" applies_to="node">0.24749261</property>\r
1221                 <property ref="vector:index=27" datatype="xsd:decimal" applies_to="node">0.4449091</property>\r
1222                 <property ref="vector:index=28" datatype="xsd:decimal" applies_to="node">0.88251626</property>\r
1223                 <property ref="vector:index=29" datatype="xsd:decimal" applies_to="node">0.9633666</property>\r
1224               </clade>\r
1225             </clade>\r
1226           </clade>\r
1227           <clade>\r
1228             <name>9_BRAFL</name>\r
1229             <branch_length>1.09612</branch_length>\r
1230             <taxonomy>\r
1231               <code>BRAFL</code>\r
1232             </taxonomy>\r
1233             <sequence>\r
1234               <domain_architecture length="1011">\r
1235                 <domain from="5" to="321" confidence="5.0E-5">NB-ARC</domain>\r
1236                 <domain from="497" to="616" confidence="1.6">BTAD</domain>\r
1237                 <domain from="500" to="533" confidence="5.6E-4">TPR_1</domain>\r
1238                 <domain from="542" to="575" confidence="0.43">TPR_1</domain>\r
1239                 <domain from="626" to="659" confidence="0.0084">TPR_2</domain>\r
1240                 <domain from="708" to="741" confidence="1.9E-4">TPR_2</domain>\r
1241                 <domain from="708" to="739" confidence="1.3">TPR_3</domain>\r
1242                 <domain from="708" to="733" confidence="0.16">TPR_4</domain>\r
1243                 <domain from="833" to="916" confidence="5.6E-14">Death</domain>\r
1244                 <domain from="846" to="868" confidence="0.36">LTXXQ</domain>\r
1245                 <domain from="930" to="1011" confidence="8.3E-17">Death</domain>\r
1246               </domain_architecture>\r
1247             </sequence>\r
1248             <property ref="vector:index=0" datatype="xsd:decimal" applies_to="node">0.029138505</property>\r
1249             <property ref="vector:index=1" datatype="xsd:decimal" applies_to="node">0.7392089</property>\r
1250             <property ref="vector:index=2" datatype="xsd:decimal" applies_to="node">0.29469502</property>\r
1251             <property ref="vector:index=3" datatype="xsd:decimal" applies_to="node">0.6214732</property>\r
1252             <property ref="vector:index=4" datatype="xsd:decimal" applies_to="node">0.29814547</property>\r
1253             <property ref="vector:index=5" datatype="xsd:decimal" applies_to="node">0.071924865</property>\r
1254             <property ref="vector:index=6" datatype="xsd:decimal" applies_to="node">0.63964516</property>\r
1255             <property ref="vector:index=7" datatype="xsd:decimal" applies_to="node">0.6425905</property>\r
1256             <property ref="vector:index=8" datatype="xsd:decimal" applies_to="node">0.08070308</property>\r
1257             <property ref="vector:index=9" datatype="xsd:decimal" applies_to="node">0.7987385</property>\r
1258             <property ref="vector:index=10" datatype="xsd:decimal" applies_to="node">0.96107805</property>\r
1259             <property ref="vector:index=11" datatype="xsd:decimal" applies_to="node">0.109133005</property>\r
1260             <property ref="vector:index=12" datatype="xsd:decimal" applies_to="node">0.6813962</property>\r
1261             <property ref="vector:index=13" datatype="xsd:decimal" applies_to="node">0.8753561</property>\r
1262             <property ref="vector:index=14" datatype="xsd:decimal" applies_to="node">0.8486281</property>\r
1263             <property ref="vector:index=15" datatype="xsd:decimal" applies_to="node">0.27510923</property>\r
1264             <property ref="vector:index=16" datatype="xsd:decimal" applies_to="node">0.7819422</property>\r
1265             <property ref="vector:index=17" datatype="xsd:decimal" applies_to="node">0.0034896731</property>\r
1266             <property ref="vector:index=18" datatype="xsd:decimal" applies_to="node">0.30382013</property>\r
1267             <property ref="vector:index=19" datatype="xsd:decimal" applies_to="node">0.4379815</property>\r
1268             <property ref="vector:index=20" datatype="xsd:decimal" applies_to="node">0.1482048</property>\r
1269             <property ref="vector:index=21" datatype="xsd:decimal" applies_to="node">0.70523816</property>\r
1270             <property ref="vector:index=22" datatype="xsd:decimal" applies_to="node">0.88436294</property>\r
1271             <property ref="vector:index=23" datatype="xsd:decimal" applies_to="node">0.8432803</property>\r
1272             <property ref="vector:index=24" datatype="xsd:decimal" applies_to="node">0.04567486</property>\r
1273             <property ref="vector:index=25" datatype="xsd:decimal" applies_to="node">0.28242683</property>\r
1274             <property ref="vector:index=26" datatype="xsd:decimal" applies_to="node">0.6291049</property>\r
1275             <property ref="vector:index=27" datatype="xsd:decimal" applies_to="node">0.3452021</property>\r
1276             <property ref="vector:index=28" datatype="xsd:decimal" applies_to="node">0.5882881</property>\r
1277             <property ref="vector:index=29" datatype="xsd:decimal" applies_to="node">0.56537116</property>\r
1278           </clade>\r
1279         </clade>\r
1280         <clade>\r
1281           <branch_length>0.34914</branch_length>\r
1282           <confidence type="unknown">98</confidence>\r
1283           <clade>\r
1284             <branch_length>0.22189</branch_length>\r
1285             <confidence type="unknown">95</confidence>\r
1286             <clade>\r
1287               <name>3_BRAFL</name>\r
1288               <branch_length>0.48766</branch_length>\r
1289               <taxonomy>\r
1290                 <code>BRAFL</code>\r
1291               </taxonomy>\r
1292               <sequence>\r
1293                 <domain_architecture length="2080">\r
1294                   <domain from="116" to="423" confidence="1.4E-12">NB-ARC</domain>\r
1295                   <domain from="620" to="659" confidence="1.4E-6">WD40</domain>\r
1296                   <domain from="663" to="701" confidence="1.4E-8">WD40</domain>\r
1297                   <domain from="705" to="743" confidence="3.0E-11">WD40</domain>\r
1298                   <domain from="747" to="785" confidence="1.1E-8">WD40</domain>\r
1299                   <domain from="788" to="826" confidence="1.6E-5">WD40</domain>\r
1300                   <domain from="830" to="870" confidence="1.3E-4">WD40</domain>\r
1301                   <domain from="874" to="914" confidence="6.2E-9">WD40</domain>\r
1302                   <domain from="919" to="957" confidence="0.0011">WD40</domain>\r
1303                   <domain from="961" to="1000" confidence="1.8E-8">WD40</domain>\r
1304                   <domain from="1013" to="1051" confidence="1.3E-6">WD40</domain>\r
1305                   <domain from="1055" to="1092" confidence="0.096">WD40</domain>\r
1306                   <domain from="1794" to="1853" confidence="3.6E-4">Collagen</domain>\r
1307                 </domain_architecture>\r
1308               </sequence>\r
1309               <property ref="vector:index=0" datatype="xsd:decimal" applies_to="node">0.54719585</property>\r
1310               <property ref="vector:index=1" datatype="xsd:decimal" applies_to="node">0.72739184</property>\r
1311               <property ref="vector:index=2" datatype="xsd:decimal" applies_to="node">0.6648757</property>\r
1312               <property ref="vector:index=3" datatype="xsd:decimal" applies_to="node">0.64871794</property>\r
1313               <property ref="vector:index=4" datatype="xsd:decimal" applies_to="node">0.21502721</property>\r
1314               <property ref="vector:index=5" datatype="xsd:decimal" applies_to="node">0.92930335</property>\r
1315               <property ref="vector:index=6" datatype="xsd:decimal" applies_to="node">0.56439596</property>\r
1316               <property ref="vector:index=7" datatype="xsd:decimal" applies_to="node">0.08426899</property>\r
1317               <property ref="vector:index=8" datatype="xsd:decimal" applies_to="node">0.84638125</property>\r
1318               <property ref="vector:index=9" datatype="xsd:decimal" applies_to="node">0.9727876</property>\r
1319               <property ref="vector:index=10" datatype="xsd:decimal" applies_to="node">0.67121017</property>\r
1320               <property ref="vector:index=11" datatype="xsd:decimal" applies_to="node">0.7764199</property>\r
1321               <property ref="vector:index=12" datatype="xsd:decimal" applies_to="node">0.7460376</property>\r
1322               <property ref="vector:index=13" datatype="xsd:decimal" applies_to="node">0.7043656</property>\r
1323               <property ref="vector:index=14" datatype="xsd:decimal" applies_to="node">0.5439719</property>\r
1324               <property ref="vector:index=15" datatype="xsd:decimal" applies_to="node">0.7700984</property>\r
1325               <property ref="vector:index=16" datatype="xsd:decimal" applies_to="node">0.31412524</property>\r
1326               <property ref="vector:index=17" datatype="xsd:decimal" applies_to="node">0.890093</property>\r
1327               <property ref="vector:index=18" datatype="xsd:decimal" applies_to="node">0.69828236</property>\r
1328               <property ref="vector:index=19" datatype="xsd:decimal" applies_to="node">0.2895137</property>\r
1329               <property ref="vector:index=20" datatype="xsd:decimal" applies_to="node">0.30514598</property>\r
1330               <property ref="vector:index=21" datatype="xsd:decimal" applies_to="node">0.06674898</property>\r
1331               <property ref="vector:index=22" datatype="xsd:decimal" applies_to="node">0.55930895</property>\r
1332               <property ref="vector:index=23" datatype="xsd:decimal" applies_to="node">0.47493166</property>\r
1333               <property ref="vector:index=24" datatype="xsd:decimal" applies_to="node">0.2573477</property>\r
1334               <property ref="vector:index=25" datatype="xsd:decimal" applies_to="node">0.47563213</property>\r
1335               <property ref="vector:index=26" datatype="xsd:decimal" applies_to="node">0.36439544</property>\r
1336               <property ref="vector:index=27" datatype="xsd:decimal" applies_to="node">0.860977</property>\r
1337               <property ref="vector:index=28" datatype="xsd:decimal" applies_to="node">0.36861706</property>\r
1338               <property ref="vector:index=29" datatype="xsd:decimal" applies_to="node">0.5094982</property>\r
1339             </clade>\r
1340             <clade>\r
1341               <name>2_BRAFL</name>\r
1342               <branch_length>0.65293</branch_length>\r
1343               <taxonomy>\r
1344                 <code>BRAFL</code>\r
1345               </taxonomy>\r
1346               <sequence>\r
1347                 <domain_architecture length="1691">\r
1348                   <domain from="162" to="457" confidence="4.4E-10">NB-ARC</domain>\r
1349                   <domain from="640" to="680" confidence="0.0068">WD40</domain>\r
1350                   <domain from="684" to="722" confidence="1.6E-8">WD40</domain>\r
1351                   <domain from="726" to="764" confidence="6.0E-9">WD40</domain>\r
1352                   <domain from="827" to="865" confidence="6.9E-10">WD40</domain>\r
1353                   <domain from="868" to="906" confidence="1.2E-6">WD40</domain>\r
1354                   <domain from="910" to="950" confidence="0.0080">WD40</domain>\r
1355                   <domain from="954" to="994" confidence="0.0016">WD40</domain>\r
1356                   <domain from="999" to="1037" confidence="4.9E-6">WD40</domain>\r
1357                   <domain from="1042" to="1080" confidence="6.3E-8">WD40</domain>\r
1358                   <domain from="1100" to="1138" confidence="1.9E-8">WD40</domain>\r
1359                   <domain from="1142" to="1178" confidence="1.4">WD40</domain>\r
1360                   <domain from="1577" to="1615" confidence="4.3E-4">WD40</domain>\r
1361                 </domain_architecture>\r
1362               </sequence>\r
1363               <property ref="vector:index=0" datatype="xsd:decimal" applies_to="node">0.5087544</property>\r
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1365               <property ref="vector:index=2" datatype="xsd:decimal" applies_to="node">0.40605485</property>\r
1366               <property ref="vector:index=3" datatype="xsd:decimal" applies_to="node">0.28072876</property>\r
1367               <property ref="vector:index=4" datatype="xsd:decimal" applies_to="node">0.62419695</property>\r
1368               <property ref="vector:index=5" datatype="xsd:decimal" applies_to="node">0.5877431</property>\r
1369               <property ref="vector:index=6" datatype="xsd:decimal" applies_to="node">0.8777735</property>\r
1370               <property ref="vector:index=7" datatype="xsd:decimal" applies_to="node">0.07690632</property>\r
1371               <property ref="vector:index=8" datatype="xsd:decimal" applies_to="node">0.949214</property>\r
1372               <property ref="vector:index=9" datatype="xsd:decimal" applies_to="node">0.55182403</property>\r
1373               <property ref="vector:index=10" datatype="xsd:decimal" applies_to="node">0.87522465</property>\r
1374               <property ref="vector:index=11" datatype="xsd:decimal" applies_to="node">0.7814357</property>\r
1375               <property ref="vector:index=12" datatype="xsd:decimal" applies_to="node">0.62940013</property>\r
1376               <property ref="vector:index=13" datatype="xsd:decimal" applies_to="node">0.0068129897</property>\r
1377               <property ref="vector:index=14" datatype="xsd:decimal" applies_to="node">0.99865466</property>\r
1378               <property ref="vector:index=15" datatype="xsd:decimal" applies_to="node">0.49017686</property>\r
1379               <property ref="vector:index=16" datatype="xsd:decimal" applies_to="node">0.02415198</property>\r
1380               <property ref="vector:index=17" datatype="xsd:decimal" applies_to="node">0.6062392</property>\r
1381               <property ref="vector:index=18" datatype="xsd:decimal" applies_to="node">0.22136152</property>\r
1382               <property ref="vector:index=19" datatype="xsd:decimal" applies_to="node">0.0043381453</property>\r
1383               <property ref="vector:index=20" datatype="xsd:decimal" applies_to="node">0.8858429</property>\r
1384               <property ref="vector:index=21" datatype="xsd:decimal" applies_to="node">0.5484487</property>\r
1385               <property ref="vector:index=22" datatype="xsd:decimal" applies_to="node">0.62266177</property>\r
1386               <property ref="vector:index=23" datatype="xsd:decimal" applies_to="node">0.09484774</property>\r
1387               <property ref="vector:index=24" datatype="xsd:decimal" applies_to="node">0.12147641</property>\r
1388               <property ref="vector:index=25" datatype="xsd:decimal" applies_to="node">0.1944167</property>\r
1389               <property ref="vector:index=26" datatype="xsd:decimal" applies_to="node">0.64538836</property>\r
1390               <property ref="vector:index=27" datatype="xsd:decimal" applies_to="node">0.14942819</property>\r
1391               <property ref="vector:index=28" datatype="xsd:decimal" applies_to="node">0.3974681</property>\r
1392               <property ref="vector:index=29" datatype="xsd:decimal" applies_to="node">0.18429059</property>\r
1393             </clade>\r
1394           </clade>\r
1395           <clade>\r
1396             <name>19_NEMVE</name>\r
1397             <branch_length>0.57144</branch_length>\r
1398             <taxonomy>\r
1399               <code>NEMVE</code>\r
1400             </taxonomy>\r
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1402               <domain_architecture length="1649">\r
1403                 <domain from="99" to="174" confidence="4.6E-7">DED</domain>\r
1404                 <domain from="181" to="503" confidence="8.0E-13">NB-ARC</domain>\r
1405                 <domain from="696" to="734" confidence="1.4E-8">WD40</domain>\r
1406                 <domain from="738" to="776" confidence="2.9E-9">WD40</domain>\r
1407                 <domain from="780" to="818" confidence="3.8E-10">WD40</domain>\r
1408                 <domain from="822" to="860" confidence="6.4E-9">WD40</domain>\r
1409                 <domain from="864" to="902" confidence="2.1E-10">WD40</domain>\r
1410                 <domain from="906" to="944" confidence="1.3E-8">WD40</domain>\r
1411                 <domain from="948" to="986" confidence="1.2E-8">WD40</domain>\r
1412                 <domain from="990" to="1028" confidence="9.4E-8">WD40</domain>\r
1413                 <domain from="1032" to="1070" confidence="6.0E-8">WD40</domain>\r
1414                 <domain from="1074" to="1112" confidence="2.6E-4">WD40</domain>\r
1415                 <domain from="1364" to="1597" confidence="1.9">SGL</domain>\r
1416                 <domain from="1442" to="1480" confidence="9.7E-7">WD40</domain>\r
1417                 <domain from="1527" to="1565" confidence="1.2">WD40</domain>\r
1418                 <domain from="1568" to="1606" confidence="1.1E-6">WD40</domain>\r
1419               </domain_architecture>\r
1420             </sequence>\r
1421             <property ref="vector:index=0" datatype="xsd:decimal" applies_to="node">0.009954751</property>\r
1422             <property ref="vector:index=1" datatype="xsd:decimal" applies_to="node">0.28162163</property>\r
1423             <property ref="vector:index=2" datatype="xsd:decimal" applies_to="node">0.9621474</property>\r
1424             <property ref="vector:index=3" datatype="xsd:decimal" applies_to="node">0.74527806</property>\r
1425             <property ref="vector:index=4" datatype="xsd:decimal" applies_to="node">0.07029891</property>\r
1426             <property ref="vector:index=5" datatype="xsd:decimal" applies_to="node">0.21764934</property>\r
1427             <property ref="vector:index=6" datatype="xsd:decimal" applies_to="node">0.04737556</property>\r
1428             <property ref="vector:index=7" datatype="xsd:decimal" applies_to="node">0.5214066</property>\r
1429             <property ref="vector:index=8" datatype="xsd:decimal" applies_to="node">0.23224568</property>\r
1430             <property ref="vector:index=9" datatype="xsd:decimal" applies_to="node">0.3144682</property>\r
1431             <property ref="vector:index=10" datatype="xsd:decimal" applies_to="node">0.08303869</property>\r
1432             <property ref="vector:index=11" datatype="xsd:decimal" applies_to="node">0.13828367</property>\r
1433             <property ref="vector:index=12" datatype="xsd:decimal" applies_to="node">0.90500253</property>\r
1434             <property ref="vector:index=13" datatype="xsd:decimal" applies_to="node">0.19856197</property>\r
1435             <property ref="vector:index=14" datatype="xsd:decimal" applies_to="node">0.6819211</property>\r
1436             <property ref="vector:index=15" datatype="xsd:decimal" applies_to="node">0.6176938</property>\r
1437             <property ref="vector:index=16" datatype="xsd:decimal" applies_to="node">0.23276955</property>\r
1438             <property ref="vector:index=17" datatype="xsd:decimal" applies_to="node">0.5633456</property>\r
1439             <property ref="vector:index=18" datatype="xsd:decimal" applies_to="node">0.09652966</property>\r
1440             <property ref="vector:index=19" datatype="xsd:decimal" applies_to="node">0.59271777</property>\r
1441             <property ref="vector:index=20" datatype="xsd:decimal" applies_to="node">0.7950512</property>\r
1442             <property ref="vector:index=21" datatype="xsd:decimal" applies_to="node">0.202681</property>\r
1443             <property ref="vector:index=22" datatype="xsd:decimal" applies_to="node">0.2359038</property>\r
1444             <property ref="vector:index=23" datatype="xsd:decimal" applies_to="node">0.34971756</property>\r
1445             <property ref="vector:index=24" datatype="xsd:decimal" applies_to="node">0.38859445</property>\r
1446             <property ref="vector:index=25" datatype="xsd:decimal" applies_to="node">0.9836112</property>\r
1447             <property ref="vector:index=26" datatype="xsd:decimal" applies_to="node">0.6845006</property>\r
1448             <property ref="vector:index=27" datatype="xsd:decimal" applies_to="node">0.9852812</property>\r
1449             <property ref="vector:index=28" datatype="xsd:decimal" applies_to="node">0.5564467</property>\r
1450             <property ref="vector:index=29" datatype="xsd:decimal" applies_to="node">0.033390045</property>\r
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1452         </clade>\r
1453       </clade>\r
1454       <clade>\r
1455         <branch_length>0.43438</branch_length>\r
1456         <confidence type="unknown">92</confidence>\r
1457         <clade>\r
1458           <branch_length>0.92214</branch_length>\r
1459           <confidence type="unknown">100</confidence>\r
1460           <clade>\r
1461             <name>37_BRAFL</name>\r
1462             <branch_length>0.21133</branch_length>\r
1463             <taxonomy>\r
1464               <code>BRAFL</code>\r
1465             </taxonomy>\r
1466             <sequence>\r
1467               <domain_architecture length="1793">\r
1468                 <domain from="6" to="89" confidence="9.6E-13">CARD</domain>\r
1469                 <domain from="118" to="202" confidence="4.5E-9">CARD</domain>\r
1470                 <domain from="206" to="491" confidence="0.0011">NB-ARC</domain>\r
1471                 <domain from="238" to="388" confidence="0.0043">NACHT</domain>\r
1472               </domain_architecture>\r
1473             </sequence>\r
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1475             <property ref="vector:index=1" datatype="xsd:decimal" applies_to="node">0.2509883</property>\r
1476             <property ref="vector:index=2" datatype="xsd:decimal" applies_to="node">0.43406636</property>\r
1477             <property ref="vector:index=3" datatype="xsd:decimal" applies_to="node">0.3101704</property>\r
1478             <property ref="vector:index=4" datatype="xsd:decimal" applies_to="node">0.015847027</property>\r
1479             <property ref="vector:index=5" datatype="xsd:decimal" applies_to="node">0.9441666</property>\r
1480             <property ref="vector:index=6" datatype="xsd:decimal" applies_to="node">0.79048187</property>\r
1481             <property ref="vector:index=7" datatype="xsd:decimal" applies_to="node">0.0849365</property>\r
1482             <property ref="vector:index=8" datatype="xsd:decimal" applies_to="node">0.43782037</property>\r
1483             <property ref="vector:index=9" datatype="xsd:decimal" applies_to="node">0.35683805</property>\r
1484             <property ref="vector:index=10" datatype="xsd:decimal" applies_to="node">0.48406595</property>\r
1485             <property ref="vector:index=11" datatype="xsd:decimal" applies_to="node">0.84163815</property>\r
1486             <property ref="vector:index=12" datatype="xsd:decimal" applies_to="node">0.16432834</property>\r
1487             <property ref="vector:index=13" datatype="xsd:decimal" applies_to="node">0.3265803</property>\r
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1492             <property ref="vector:index=18" datatype="xsd:decimal" applies_to="node">0.6818895</property>\r
1493             <property ref="vector:index=19" datatype="xsd:decimal" applies_to="node">0.87826383</property>\r
1494             <property ref="vector:index=20" datatype="xsd:decimal" applies_to="node">0.1475057</property>\r
1495             <property ref="vector:index=21" datatype="xsd:decimal" applies_to="node">0.9767141</property>\r
1496             <property ref="vector:index=22" datatype="xsd:decimal" applies_to="node">0.22635978</property>\r
1497             <property ref="vector:index=23" datatype="xsd:decimal" applies_to="node">0.48134655</property>\r
1498             <property ref="vector:index=24" datatype="xsd:decimal" applies_to="node">0.73147255</property>\r
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1500             <property ref="vector:index=26" datatype="xsd:decimal" applies_to="node">0.68894583</property>\r
1501             <property ref="vector:index=27" datatype="xsd:decimal" applies_to="node">0.84709823</property>\r
1502             <property ref="vector:index=28" datatype="xsd:decimal" applies_to="node">0.40772527</property>\r
1503             <property ref="vector:index=29" datatype="xsd:decimal" applies_to="node">0.98245925</property>\r
1504           </clade>\r
1505           <clade>\r
1506             <name>36_BRAFL</name>\r
1507             <branch_length>0.16225</branch_length>\r
1508             <taxonomy>\r
1509               <code>BRAFL</code>\r
1510             </taxonomy>\r
1511             <sequence>\r
1512               <domain_architecture length="918">\r
1513                 <domain from="9" to="93" confidence="1.6E-9">CARD</domain>\r
1514                 <domain from="98" to="403" confidence="0.0019">NB-ARC</domain>\r
1515               </domain_architecture>\r
1516             </sequence>\r
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1522             <property ref="vector:index=5" datatype="xsd:decimal" applies_to="node">0.22011238</property>\r
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1525             <property ref="vector:index=8" datatype="xsd:decimal" applies_to="node">0.3118307</property>\r
1526             <property ref="vector:index=9" datatype="xsd:decimal" applies_to="node">0.39229184</property>\r
1527             <property ref="vector:index=10" datatype="xsd:decimal" applies_to="node">0.13150632</property>\r
1528             <property ref="vector:index=11" datatype="xsd:decimal" applies_to="node">0.5283403</property>\r
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1531             <property ref="vector:index=14" datatype="xsd:decimal" applies_to="node">5.7667494E-4</property>\r
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1533             <property ref="vector:index=16" datatype="xsd:decimal" applies_to="node">0.67283815</property>\r
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1537             <property ref="vector:index=20" datatype="xsd:decimal" applies_to="node">0.8514751</property>\r
1538             <property ref="vector:index=21" datatype="xsd:decimal" applies_to="node">0.7269506</property>\r
1539             <property ref="vector:index=22" datatype="xsd:decimal" applies_to="node">0.47157425</property>\r
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1546             <property ref="vector:index=29" datatype="xsd:decimal" applies_to="node">0.81235546</property>\r
1547           </clade>\r
1548         </clade>\r
1549         <clade>\r
1550           <name>33_BRAFL</name>\r
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1552           <taxonomy>\r
1553             <code>BRAFL</code>\r
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1555           <sequence>\r
1556             <domain_architecture length="1212">\r
1557               <domain from="5" to="87" confidence="4.7E-12">Death</domain>\r
1558               <domain from="154" to="465" confidence="2.0E-6">NB-ARC</domain>\r
1559             </domain_architecture>\r
1560           </sequence>\r
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1573           <property ref="vector:index=12" datatype="xsd:decimal" applies_to="node">0.6491494</property>\r
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1579           <property ref="vector:index=18" datatype="xsd:decimal" applies_to="node">0.4106474</property>\r
1580           <property ref="vector:index=19" datatype="xsd:decimal" applies_to="node">0.8965471</property>\r
1581           <property ref="vector:index=20" datatype="xsd:decimal" applies_to="node">0.02289021</property>\r
1582           <property ref="vector:index=21" datatype="xsd:decimal" applies_to="node">0.635066</property>\r
1583           <property ref="vector:index=22" datatype="xsd:decimal" applies_to="node">0.33083183</property>\r
1584           <property ref="vector:index=23" datatype="xsd:decimal" applies_to="node">0.46602124</property>\r
1585           <property ref="vector:index=24" datatype="xsd:decimal" applies_to="node">0.64916927</property>\r
1586           <property ref="vector:index=25" datatype="xsd:decimal" applies_to="node">0.61785233</property>\r
1587           <property ref="vector:index=26" datatype="xsd:decimal" applies_to="node">0.27340293</property>\r
1588           <property ref="vector:index=27" datatype="xsd:decimal" applies_to="node">0.59512466</property>\r
1589           <property ref="vector:index=28" datatype="xsd:decimal" applies_to="node">0.21337914</property>\r
1590           <property ref="vector:index=29" datatype="xsd:decimal" applies_to="node">0.89138556</property>\r
1591         </clade>\r
1592       </clade>\r
1593     </clade>\r
1594   </clade>\r
1595 </phylogeny>\r
1596 </phyloxml>