forester/aptx/aptx_example_files/bcl_2.xml

   1 <?xml version="1.0" encoding="UTF-8"?>
   2 <phyloxml xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
   3    xsi:schemaLocation="http://www.phyloxml.org http://www.phyloxml.org/1.10/phyloxml.xsd"
   4    xmlns="http://www.phyloxml.org">
   5    <phylogeny rooted="true">
   6       <name>Bcl-2</name>
   7       <clade>
   8          <events>
   9             <duplications>1</duplications>
  10          </events>
  11          <clade>
  12             <branch_length>0.21409500000000004</branch_length>
  13             <confidence type="bootstrap">33.0</confidence>
  14             <events>
  15                <duplications>1</duplications>
  16             </events>
  17             <clade>
  18                <branch_length>0.22234</branch_length>
  19                <confidence type="bootstrap">58.0</confidence>
  20                <events>
  21                   <duplications>1</duplications>
  22                </events>
  23                <clade>
  24                   <branch_length>0.68133</branch_length>
  25                   <confidence type="bootstrap">99.0</confidence>
  26                   <events>
  27                      <duplications>1</duplications>
  28                   </events>
  29                   <clade>
  30                      <branch_length>0.0946</branch_length>
  31                      <confidence type="bootstrap">72.0</confidence>
  32                      <events>
  33                         <duplications>1</duplications>
  34                      </events>
  35                      <clade>
  36                         <branch_length>0.24716</branch_length>
  37                         <confidence type="bootstrap">35.0</confidence>
  38                         <events>
  39                            <speciations>1</speciations>
  40                         </events>
  41                         <clade>
  42                            <branch_length>0.18828</branch_length>
  43                            <confidence type="bootstrap">33.0</confidence>
  44                            <events>
  45                               <duplications>1</duplications>
  46                            </events>
  47                            <clade>
  48                               <branch_length>0.10487</branch_length>
  49                               <confidence type="bootstrap">37.0</confidence>
  50                               <events>
  51                                  <speciations>1</speciations>
  52                               </events>
  53                               <clade>
  54                                  <name>51_CHICK</name>
  55                                  <branch_length>0.28045</branch_length>
  56                                  <taxonomy>
  57                                     <code>CHICK</code>
  58                                  </taxonomy>
  59                               </clade>
  60                               <clade>
  61                                  <name>145_XENLA</name>
  62                                  <branch_length>0.59876</branch_length>
  63                                  <taxonomy>
  64                                     <code>XENLA</code>
  65                                  </taxonomy>
  66                               </clade>
  67                            </clade>
  68                            <clade>
  69                               <branch_length>0.38418</branch_length>
  70                               <confidence type="bootstrap">100.0</confidence>
  71                               <events>
  72                                  <duplications>1</duplications>
  73                               </events>
  74                               <clade>
  75                                  <branch_length>0.0267</branch_length>
  76                                  <confidence type="bootstrap">39.0</confidence>
  77                                  <events>
  78                                     <speciations>1</speciations>
  79                                  </events>
  80                                  <clade>
  81                                     <name>88_CANFA</name>
  82                                     <branch_length>0.08127</branch_length>
  83                                     <taxonomy>
  84                                        <code>CANFA</code>
  85                                     </taxonomy>
  86                                  </clade>
  87                                  <clade>
  88                                     <name>115_MOUSE</name>
  89                                     <branch_length>0.14168</branch_length>
  90                                     <taxonomy>
  91                                        <code>MOUSE</code>
  92                                     </taxonomy>
  93                                  </clade>
  94                               </clade>
  95                               <clade>
  96                                  <branch_length>1.0E-5</branch_length>
  97                                  <confidence type="bootstrap">55.0</confidence>
  98                                  <events>
  99                                     <speciations>1</speciations>
 100                                  </events>
 101                                  <clade>
 102                                     <name>74_BOVIN</name>
 103                                     <branch_length>0.09416</branch_length>
 104                                     <taxonomy>
 105                                        <code>BOVIN</code>
 106                                     </taxonomy>
 107                                  </clade>
 108                                  <clade>
 109                                     <name>9_HUMAN</name>
 110                                     <branch_length>0.06828</branch_length>
 111                                     <taxonomy>
 112                                        <code>HUMAN</code>
 113                                     </taxonomy>
 114                                  </clade>
 115                               </clade>
 116                            </clade>
 117                         </clade>
 118                         <clade>
 119                            <branch_length>0.35342</branch_length>
 120                            <confidence type="bootstrap">100.0</confidence>
 121                            <events>
 122                               <duplications>1</duplications>
 123                            </events>
 124                            <clade>
 125                               <name>159_BRARE</name>
 126                               <branch_length>0.01275</branch_length>
 127                               <taxonomy>
 128                                  <code>BRARE</code>
 129                               </taxonomy>
 130                            </clade>
 131                            <clade>
 132                               <name>166_BRARE</name>
 133                               <branch_length>0.02259</branch_length>
 134                               <taxonomy>
 135                                  <code>BRARE</code>
 136                               </taxonomy>
 137                            </clade>
 138                         </clade>
 139                      </clade>
 140                      <clade>
 141                         <branch_length>0.39739</branch_length>
 142                         <confidence type="bootstrap">99.0</confidence>
 143                         <events>
 144                            <speciations>1</speciations>
 145                         </events>
 146                         <clade>
 147                            <name>52_CHICK</name>
 148                            <branch_length>0.27747</branch_length>
 149                            <taxonomy>
 150                               <code>CHICK</code>
 151                            </taxonomy>
 152                         </clade>
 153                         <clade>
 154                            <name>144_XENLA</name>
 155                            <branch_length>0.34644</branch_length>
 156                            <taxonomy>
 157                               <code>XENLA</code>
 158                            </taxonomy>
 159                         </clade>
 160                      </clade>
 161                   </clade>
 162                   <clade>
 163                      <branch_length>0.51997</branch_length>
 164                      <confidence type="bootstrap">100.0</confidence>
 165                      <events>
 166                         <speciations>1</speciations>
 167                      </events>
 168                      <clade>
 169                         <branch_length>0.0983</branch_length>
 170                         <confidence type="bootstrap">56.0</confidence>
 171                         <events>
 172                            <speciations>1</speciations>
 173                         </events>
 174                         <clade>
 175                            <branch_length>0.5126</branch_length>
 176                            <confidence type="bootstrap">100.0</confidence>
 177                            <events>
 178                               <duplications>1</duplications>
 179                            </events>
 180                            <clade>
 181                               <branch_length>1.0E-5</branch_length>
 182                               <confidence type="bootstrap">46.0</confidence>
 183                               <events>
 184                                  <speciations>1</speciations>
 185                               </events>
 186                               <clade>
 187                                  <name>90_CANFA</name>
 188                                  <branch_length>0.03744</branch_length>
 189                                  <taxonomy>
 190                                     <code>CANFA</code>
 191                                  </taxonomy>
 192                               </clade>
 193                               <clade>
 194                                  <name>12_HUMAN</name>
 195                                  <branch_length>0.07368</branch_length>
 196                                  <taxonomy>
 197                                     <code>HUMAN</code>
 198                                  </taxonomy>
 199                               </clade>
 200                            </clade>
 201                            <clade>
 202                               <name>64_BOVIN</name>
 203                               <branch_length>0.05675</branch_length>
 204                               <taxonomy>
 205                                  <code>BOVIN</code>
 206                               </taxonomy>
 207                            </clade>
 208                         </clade>
 209                         <clade>
 210                            <name>142_XENLA</name>
 211                            <branch_length>0.26292</branch_length>
 212                            <taxonomy>
 213                               <code>XENLA</code>
 214                            </taxonomy>
 215                         </clade>
 216                      </clade>
 217                      <clade>
 218                         <branch_length>0.34592</branch_length>
 219                         <confidence type="bootstrap">99.0</confidence>
 220                         <events>
 221                            <duplications>1</duplications>
 222                         </events>
 223                         <clade>
 224                            <name>155_BRARE</name>
 225                            <branch_length>1.0E-5</branch_length>
 226                            <taxonomy>
 227                               <code>BRARE</code>
 228                            </taxonomy>
 229                         </clade>
 230                         <clade>
 231                            <name>154_BRARE</name>
 232                            <branch_length>1.0E-5</branch_length>
 233                            <taxonomy>
 234                               <code>BRARE</code>
 235                            </taxonomy>
 236                         </clade>
 237                      </clade>
 238                   </clade>
 239                </clade>
 240                <clade>
 241                   <branch_length>1.25362</branch_length>
 242                   <confidence type="bootstrap">100.0</confidence>
 243                   <events>
 244                      <duplications>1</duplications>
 245                   </events>
 246                   <clade>
 247                      <name>125_MOUSE</name>
 248                      <branch_length>0.04425</branch_length>
 249                      <taxonomy>
 250                         <code>MOUSE</code>
 251                      </taxonomy>
 252                   </clade>
 253                   <clade>
 254                      <branch_length>0.14928</branch_length>
 255                      <confidence type="bootstrap">40.0</confidence>
 256                      <events>
 257                         <speciations>1</speciations>
 258                      </events>
 259                      <clade>
 260                         <name>95_CANFA</name>
 261                         <branch_length>0.09977</branch_length>
 262                         <taxonomy>
 263                            <code>CANFA</code>
 264                         </taxonomy>
 265                      </clade>
 266                      <clade>
 267                         <name>13_HUMAN</name>
 268                         <branch_length>0.07433</branch_length>
 269                         <taxonomy>
 270                            <code>HUMAN</code>
 271                         </taxonomy>
 272                      </clade>
 273                   </clade>
 274                </clade>
 275             </clade>
 276             <clade>
 277                <branch_length>0.57089</branch_length>
 278                <confidence type="bootstrap">66.0</confidence>
 279                <events>
 280                   <speciations>1</speciations>
 281                </events>
 282                <clade>
 283                   <branch_length>0.53798</branch_length>
 284                   <confidence type="bootstrap">100.0</confidence>
 285                   <events>
 286                      <duplications>1</duplications>
 287                   </events>
 288                   <clade>
 289                      <name>16_SPHGR</name>
 290                      <branch_length>1.0E-5</branch_length>
 291                      <taxonomy>
 292                         <code>SPHGR</code>
 293                      </taxonomy>
 294                   </clade>
 295                   <clade>
 296                      <name>17_SPHGR</name>
 297                      <branch_length>1.0E-5</branch_length>
 298                      <taxonomy>
 299                         <code>SPHGR</code>
 300                      </taxonomy>
 301                   </clade>
 302                </clade>
 303                <clade>
 304                   <branch_length>0.69471</branch_length>
 305                   <confidence type="bootstrap">89.0</confidence>
 306                   <events>
 307                      <speciations>1</speciations>
 308                   </events>
 309                   <clade>
 310                      <branch_length>0.15935</branch_length>
 311                      <confidence type="bootstrap">83.0</confidence>
 312                      <events>
 313                         <speciations>1</speciations>
 314                      </events>
 315                      <clade>
 316                         <branch_length>0.24123</branch_length>
 317                         <confidence type="bootstrap">100.0</confidence>
 318                         <events>
 319                            <duplications>1</duplications>
 320                         </events>
 321                         <clade>
 322                            <name>158_BRARE</name>
 323                            <branch_length>1.0E-5</branch_length>
 324                            <taxonomy>
 325                               <code>BRARE</code>
 326                            </taxonomy>
 327                         </clade>
 328                         <clade>
 329                            <name>169_BRARE</name>
 330                            <branch_length>1.0E-5</branch_length>
 331                            <taxonomy>
 332                               <code>BRARE</code>
 333                            </taxonomy>
 334                         </clade>
 335                      </clade>
 336                      <clade>
 337                         <name>130_TETNG</name>
 338                         <branch_length>0.37777</branch_length>
 339                         <taxonomy>
 340                            <code>TETNG</code>
 341                         </taxonomy>
 342                      </clade>
 343                   </clade>
 344                   <clade>
 345                      <branch_length>0.13835</branch_length>
 346                      <confidence type="bootstrap">44.0</confidence>
 347                      <events>
 348                         <speciations>1</speciations>
 349                      </events>
 350                      <clade>
 351                         <branch_length>0.1765</branch_length>
 352                         <confidence type="bootstrap">73.0</confidence>
 353                         <events>
 354                            <duplications>1</duplications>
 355                         </events>
 356                         <clade>
 357                            <name>122_MOUSE</name>
 358                            <branch_length>0.10759</branch_length>
 359                            <taxonomy>
 360                               <code>MOUSE</code>
 361                            </taxonomy>
 362                         </clade>
 363                         <clade>
 364                            <branch_length>0.09256</branch_length>
 365                            <confidence type="bootstrap">44.0</confidence>
 366                            <events>
 367                               <speciations>1</speciations>
 368                            </events>
 369                            <clade>
 370                               <branch_length>0.01016</branch_length>
 371                               <confidence type="bootstrap">40.0</confidence>
 372                               <events>
 373                                  <duplications>1</duplications>
 374                               </events>
 375                               <clade>
 376                                  <branch_length>0.0243</branch_length>
 377                                  <confidence type="bootstrap">32.0</confidence>
 378                                  <events>
 379                                     <speciations>1</speciations>
 380                                  </events>
 381                                  <clade>
 382                                     <name>11_HUMAN</name>
 383                                     <branch_length>0.02336</branch_length>
 384                                     <taxonomy>
 385                                        <code>HUMAN</code>
 386                                     </taxonomy>
 387                                  </clade>
 388                                  <clade>
 389                                     <name>68_BOVIN</name>
 390                                     <branch_length>0.24624</branch_length>
 391                                     <taxonomy>
 392                                        <code>BOVIN</code>
 393                                     </taxonomy>
 394                                  </clade>
 395                               </clade>
 396                               <clade>
 397                                  <name>92_CANFA</name>
 398                                  <branch_length>1.0E-5</branch_length>
 399                                  <taxonomy>
 400                                     <code>CANFA</code>
 401                                  </taxonomy>
 402                               </clade>
 403                            </clade>
 404                            <clade>
 405                               <name>46_CHICK</name>
 406                               <branch_length>1.06707</branch_length>
 407                               <taxonomy>
 408                                  <code>CHICK</code>
 409                               </taxonomy>
 410                            </clade>
 411                         </clade>
 412                      </clade>
 413                      <clade>
 414                         <name>147_XENLA</name>
 415                         <branch_length>0.43513</branch_length>
 416                         <taxonomy>
 417                            <code>XENLA</code>
 418                         </taxonomy>
 419                      </clade>
 420                   </clade>
 421                </clade>
 422             </clade>
 423          </clade>
 424          <clade>
 425             <branch_length>0.21984499999999996</branch_length>
 426             <confidence type="bootstrap">33.0</confidence>
 427             <events>
 428                <duplications>1</duplications>
 429             </events>
 430             <clade>
 431                <branch_length>0.13885</branch_length>
 432                <confidence type="bootstrap">14.0</confidence>
 433                <events>
 434                   <duplications>1</duplications>
 435                </events>
 436                <clade>
 437                   <branch_length>0.07066</branch_length>
 438                   <confidence type="bootstrap">2.0</confidence>
 439                   <events>
 440                      <duplications>1</duplications>
 441                   </events>
 442                   <clade>
 443                      <branch_length>0.0137</branch_length>
 444                      <confidence type="bootstrap">3.0</confidence>
 445                      <events>
 446                         <speciations>1</speciations>
 447                      </events>
 448                      <clade>
 449                         <branch_length>0.10632</branch_length>
 450                         <confidence type="bootstrap">4.0</confidence>
 451                         <events>
 452                            <duplications>1</duplications>
 453                         </events>
 454                         <clade>
 455                            <branch_length>0.09782</branch_length>
 456                            <confidence type="bootstrap">15.0</confidence>
 457                            <events>
 458                               <speciations>1</speciations>
 459                            </events>
 460                            <clade>
 461                               <branch_length>0.08093</branch_length>
 462                               <confidence type="bootstrap">32.0</confidence>
 463                               <events>
 464                                  <speciations>1</speciations>
 465                               </events>
 466                               <clade>
 467                                  <branch_length>0.17228</branch_length>
 468                                  <confidence type="bootstrap">52.0</confidence>
 469                                  <events>
 470                                     <duplications>1</duplications>
 471                                  </events>
 472                                  <clade>
 473                                     <branch_length>0.22305</branch_length>
 474                                     <confidence type="bootstrap">76.0</confidence>
 475                                     <events>
 476                                        <duplications>1</duplications>
 477                                     </events>
 478                                     <clade>
 479                                        <branch_length>0.00625</branch_length>
 480                                        <confidence type="bootstrap">55.0</confidence>
 481                                        <events>
 482                                           <speciations>1</speciations>
 483                                        </events>
 484                                        <clade>
 485                                           <name>140_TETNG</name>
 486                                           <branch_length>0.92309</branch_length>
 487                                           <taxonomy>
 488                                              <code>TETNG</code>
 489                                           </taxonomy>
 490                                        </clade>
 491                                        <clade>
 492                                           <branch_length>0.07662</branch_length>
 493                                           <confidence type="bootstrap">43.0</confidence>
 494                                           <events>
 495                                              <speciations>1</speciations>
 496                                           </events>
 497                                           <clade>
 498                                              <name>152_XENLA</name>
 499                                              <branch_length>0.19286</branch_length>
 500                                              <taxonomy>
 501                                                 <code>XENLA</code>
 502                                              </taxonomy>
 503                                           </clade>
 504                                           <clade>
 505                                              <branch_length>0.0429</branch_length>
 506                                              <confidence type="bootstrap">35.0</confidence>
 507                                              <events>
 508                                                 <speciations>1</speciations>
 509                                              </events>
 510                                              <clade>
 511                                                 <branch_length>0.06125</branch_length>
 512                                                 <confidence type="bootstrap">68.0</confidence>
 513                                                 <events>
 514                                                    <duplications>1</duplications>
 515                                                 </events>
 516                                                 <clade>
 517                                                    <branch_length>1.0E-5</branch_length>
 518                                                    <confidence type="bootstrap">93.0</confidence>
 519                                                    <events>
 520                                                       <duplications>1</duplications>
 521                                                    </events>
 522                                                    <clade>
 523                                                       <branch_length>1.0E-5</branch_length>
 524                                                       <confidence type="bootstrap">75.0</confidence>
 525                                                       <events>
 526                                                          <speciations>1</speciations>
 527                                                       </events>
 528                                                       <clade>
 529                                                          <name>0_HUMAN</name>
 530                                                          <branch_length>1.0E-5</branch_length>
 531                                                          <taxonomy>
 532                                                             <code>HUMAN</code>
 533                                                          </taxonomy>
 534                                                       </clade>
 535                                                       <clade>
 536                                                          <name>72_BOVIN</name>
 537                                                          <branch_length>0.0105</branch_length>
 538                                                          <taxonomy>
 539                                                             <code>BOVIN</code>
 540                                                          </taxonomy>
 541                                                       </clade>
 542                                                    </clade>
 543                                                    <clade>
 544                                                       <name>123_MOUSE</name>
 545                                                       <branch_length>0.01053</branch_length>
 546                                                       <taxonomy>
 547                                                          <code>MOUSE</code>
 548                                                       </taxonomy>
 549                                                    </clade>
 550                                                 </clade>
 551                                                 <clade>
 552                                                    <name>97_CANFA</name>
 553                                                    <branch_length>1.0E-5</branch_length>
 554                                                    <taxonomy>
 555                                                       <code>CANFA</code>
 556                                                    </taxonomy>
 557                                                 </clade>
 558                                              </clade>
 559                                              <clade>
 560                                                 <name>41_CHICK</name>
 561                                                 <branch_length>0.03818</branch_length>
 562                                                 <taxonomy>
 563                                                    <code>CHICK</code>
 564                                                 </taxonomy>
 565                                              </clade>
 566                                           </clade>
 567                                        </clade>
 568                                     </clade>
 569                                     <clade>
 570                                        <branch_length>0.07344</branch_length>
 571                                        <confidence type="bootstrap">38.0</confidence>
 572                                        <events>
 573                                           <speciations>1</speciations>
 574                                        </events>
 575                                        <clade>
 576                                           <branch_length>0.18878</branch_length>
 577                                           <confidence type="bootstrap">96.0</confidence>
 578                                           <events>
 579                                              <speciations>1</speciations>
 580                                           </events>
 581                                           <clade>
 582                                              <branch_length>0.02241</branch_length>
 583                                              <confidence type="bootstrap">81.0</confidence>
 584                                              <events>
 585                                                 <duplications>1</duplications>
 586                                              </events>
 587                                              <clade>
 588                                                 <name>132_TETNG</name>
 589                                                 <branch_length>1.0E-5</branch_length>
 590                                                 <taxonomy>
 591                                                    <code>TETNG</code>
 592                                                 </taxonomy>
 593                                              </clade>
 594                                              <clade>
 595                                                 <name>135_TETNG</name>
 596                                                 <branch_length>1.0E-5</branch_length>
 597                                                 <taxonomy>
 598                                                    <code>TETNG</code>
 599                                                 </taxonomy>
 600                                              </clade>
 601                                           </clade>
 602                                           <clade>
 603                                              <name>102_FUGRU</name>
 604                                              <branch_length>0.00904</branch_length>
 605                                              <taxonomy>
 606                                                 <code>FUGRU</code>
 607                                              </taxonomy>
 608                                           </clade>
 609                                        </clade>
 610                                        <clade>
 611                                           <name>167_BRARE</name>
 612                                           <branch_length>0.26949</branch_length>
 613                                           <taxonomy>
 614                                              <code>BRARE</code>
 615                                           </taxonomy>
 616                                        </clade>
 617                                     </clade>
 618                                  </clade>
 619                                  <clade>
 620                                     <branch_length>0.0375</branch_length>
 621                                     <confidence type="bootstrap">23.0</confidence>
 622                                     <events>
 623                                        <duplications>1</duplications>
 624                                     </events>
 625                                     <clade>
 626                                        <branch_length>0.23552</branch_length>
 627                                        <confidence type="bootstrap">99.0</confidence>
 628                                        <events>
 629                                           <speciations>1</speciations>
 630                                        </events>
 631                                        <clade>
 632                                           <name>151_XENLA</name>
 633                                           <branch_length>0.12315</branch_length>
 634                                           <taxonomy>
 635                                              <code>XENLA</code>
 636                                           </taxonomy>
 637                                        </clade>
 638                                        <clade>
 639                                           <branch_length>0.22499</branch_length>
 640                                           <confidence type="bootstrap">100.0</confidence>
 641                                           <events>
 642                                              <duplications>1</duplications>
 643                                           </events>
 644                                           <clade>
 645                                              <name>126_MOUSE</name>
 646                                              <branch_length>1.0E-5</branch_length>
 647                                              <taxonomy>
 648                                                 <code>MOUSE</code>
 649                                              </taxonomy>
 650                                           </clade>
 651                                           <clade>
 652                                              <branch_length>0.01047</branch_length>
 653                                              <confidence type="bootstrap">100.0</confidence>
 654                                              <events>
 655                                                 <duplications>1</duplications>
 656                                              </events>
 657                                              <clade>
 658                                                 <name>96_CANFA</name>
 659                                                 <branch_length>1.0E-5</branch_length>
 660                                                 <taxonomy>
 661                                                    <code>CANFA</code>
 662                                                 </taxonomy>
 663                                              </clade>
 664                                              <clade>
 665                                                 <branch_length>1.0E-5</branch_length>
 666                                                 <confidence type="bootstrap">100.0</confidence>
 667                                                 <events>
 668                                                    <speciations>1</speciations>
 669                                                 </events>
 670                                                 <clade>
 671                                                    <name>8_HUMAN</name>
 672                                                    <branch_length>1.0E-5</branch_length>
 673                                                    <taxonomy>
 674                                                       <code>HUMAN</code>
 675                                                    </taxonomy>
 676                                                 </clade>
 677                                                 <clade>
 678                                                    <name>79_BOVIN</name>
 679                                                    <branch_length>1.0E-5</branch_length>
 680                                                    <taxonomy>
 681                                                       <code>BOVIN</code>
 682                                                    </taxonomy>
 683                                                 </clade>
 684                                              </clade>
 685                                           </clade>
 686                                        </clade>
 687                                     </clade>
 688                                     <clade>
 689                                        <branch_length>0.04974</branch_length>
 690                                        <confidence type="bootstrap">25.0</confidence>
 691                                        <events>
 692                                           <speciations>1</speciations>
 693                                        </events>
 694                                        <clade>
 695                                           <branch_length>0.20281</branch_length>
 696                                           <confidence type="bootstrap">86.0</confidence>
 697                                           <events>
 698                                              <duplications>1</duplications>
 699                                           </events>
 700                                           <clade>
 701                                              <branch_length>1.0E-5</branch_length>
 702                                              <confidence type="bootstrap">92.0</confidence>
 703                                              <events>
 704                                                 <speciations>1</speciations>
 705                                              </events>
 706                                              <clade>
 707                                                 <name>164_BRARE</name>
 708                                                 <branch_length>0.02901</branch_length>
 709                                                 <taxonomy>
 710                                                    <code>BRARE</code>
 711                                                 </taxonomy>
 712                                              </clade>
 713                                              <clade>
 714                                                 <branch_length>0.06877</branch_length>
 715                                                 <confidence type="bootstrap">100.0</confidence>
 716                                                 <events>
 717                                                    <speciations>1</speciations>
 718                                                 </events>
 719                                                 <clade>
 720                                                    <name>136_TETNG</name>
 721                                                    <branch_length>0.01045</branch_length>
 722                                                    <taxonomy>
 723                                                       <code>TETNG</code>
 724                                                    </taxonomy>
 725                                                 </clade>
 726                                                 <clade>
 727                                                    <name>100_FUGRU</name>
 728                                                    <branch_length>1.0E-5</branch_length>
 729                                                    <taxonomy>
 730                                                       <code>FUGRU</code>
 731                                                    </taxonomy>
 732                                                 </clade>
 733                                              </clade>
 734                                           </clade>
 735                                           <clade>
 736                                              <branch_length>0.17649</branch_length>
 737                                              <confidence type="bootstrap">84.0</confidence>
 738                                              <events>
 739                                                 <duplications>1</duplications>
 740                                              </events>
 741                                              <clade>
 742                                                 <branch_length>0.05352</branch_length>
 743                                                 <confidence type="bootstrap">97.0</confidence>
 744                                                 <events>
 745                                                    <speciations>1</speciations>
 746                                                 </events>
 747                                                 <clade>
 748                                                    <name>129_TETNG</name>
 749                                                    <branch_length>6.9E-4</branch_length>
 750                                                    <taxonomy>
 751                                                       <code>TETNG</code>
 752                                                    </taxonomy>
 753                                                 </clade>
 754                                                 <clade>
 755                                                    <name>104_FUGRU</name>
 756                                                    <branch_length>0.03078</branch_length>
 757                                                    <taxonomy>
 758                                                       <code>FUGRU</code>
 759                                                    </taxonomy>
 760                                                 </clade>
 761                                              </clade>
 762                                              <clade>
 763                                                 <branch_length>0.23291</branch_length>
 764                                                 <confidence type="bootstrap">95.0</confidence>
 765                                                 <events>
 766                                                    <speciations>1</speciations>
 767                                                 </events>
 768                                                 <clade>
 769                                                    <name>128_TETNG</name>
 770                                                    <branch_length>0.36032</branch_length>
 771                                                    <taxonomy>
 772                                                       <code>TETNG</code>
 773                                                    </taxonomy>
 774                                                 </clade>
 775                                                 <clade>
 776                                                    <branch_length>0.24906</branch_length>
 777                                                    <confidence type="bootstrap">100.0</confidence>
 778                                                    <events>
 779                                                       <duplications>1</duplications>
 780                                                    </events>
 781                                                    <clade>
 782                                                       <name>103_FUGRU</name>
 783                                                       <branch_length>0.24206</branch_length>
 784                                                       <taxonomy>
 785                                                          <code>FUGRU</code>
 786                                                       </taxonomy>
 787                                                    </clade>
 788                                                    <clade>
 789                                                       <branch_length>0.09945</branch_length>
 790                                                       <confidence type="bootstrap">65.0</confidence>
 791                                                       <events>
 792                                                          <duplications>1</duplications>
 793                                                       </events>
 794                                                       <clade>
 795                                                          <name>106_FUGRU</name>
 796                                                          <branch_length>0.04182</branch_length>
 797                                                          <taxonomy>
 798                                                             <code>FUGRU</code>
 799                                                          </taxonomy>
 800                                                       </clade>
 801                                                       <clade>
 802                                                          <branch_length>1.0E-5</branch_length>
 803                                                          <confidence type="bootstrap">77.0</confidence>
 804                                                          <events>
 805                                                             <duplications>1</duplications>
 806                                                          </events>
 807                                                          <clade>
 808                                                             <branch_length>0.0141</branch_length>
 809                                                             <confidence type="bootstrap">71.0</confidence>
 810                                                             <events>
 811                                                             <duplications>1</duplications>
 812                                                             </events>
 813                                                             <clade>
 814                                                             <name>112_FUGRU</name>
 815                                                             <branch_length>0.03123</branch_length>
 816                                                             <taxonomy>
 817                                                             <code>FUGRU</code>
 818                                                             </taxonomy>
 819                                                             </clade>
 820                                                             <clade>
 821                                                             <name>113_FUGRU</name>
 822                                                             <branch_length>0.09693</branch_length>
 823                                                             <taxonomy>
 824                                                             <code>FUGRU</code>
 825                                                             </taxonomy>
 826                                                             </clade>
 827                                                          </clade>
 828                                                          <clade>
 829                                                             <branch_length>0.195</branch_length>
 830                                                             <confidence type="bootstrap">100.0</confidence>
 831                                                             <events>
 832                                                             <duplications>1</duplications>
 833                                                             </events>
 834                                                             <clade>
 835                                                             <name>108_FUGRU</name>
 836                                                             <branch_length>0.01027</branch_length>
 837                                                             <taxonomy>
 838                                                             <code>FUGRU</code>
 839                                                             </taxonomy>
 840                                                             </clade>
 841                                                             <clade>
 842                                                             <name>111_FUGRU</name>
 843                                                             <branch_length>0.01081</branch_length>
 844                                                             <taxonomy>
 845                                                             <code>FUGRU</code>
 846                                                             </taxonomy>
 847                                                             </clade>
 848                                                          </clade>
 849                                                       </clade>
 850                                                    </clade>
 851                                                 </clade>
 852                                              </clade>
 853                                           </clade>
 854                                        </clade>
 855                                        <clade>
 856                                           <branch_length>0.03668</branch_length>
 857                                           <confidence type="bootstrap">58.0</confidence>
 858                                           <events>
 859                                              <speciations>1</speciations>
 860                                           </events>
 861                                           <clade>
 862                                              <name>149_XENLA</name>
 863                                              <branch_length>0.32167</branch_length>
 864                                              <taxonomy>
 865                                                 <code>XENLA</code>
 866                                              </taxonomy>
 867                                           </clade>
 868                                           <clade>
 869                                              <branch_length>0.07846</branch_length>
 870                                              <confidence type="bootstrap">90.0</confidence>
 871                                              <events>
 872                                                 <speciations>1</speciations>
 873                                              </events>
 874                                              <clade>
 875                                                 <name>49_CHICK</name>
 876                                                 <branch_length>0.05537</branch_length>
 877                                                 <taxonomy>
 878                                                    <code>CHICK</code>
 879                                                 </taxonomy>
 880                                              </clade>
 881                                              <clade>
 882                                                 <branch_length>0.03275</branch_length>
 883                                                 <confidence type="bootstrap">83.0</confidence>
 884                                                 <events>
 885                                                    <duplications>1</duplications>
 886                                                 </events>
 887                                                 <clade>
 888                                                    <branch_length>0.192</branch_length>
 889                                                    <confidence type="bootstrap">99.0</confidence>
 890                                                    <events>
 891                                                       <duplications>1</duplications>
 892                                                    </events>
 893                                                    <clade>
 894                                                       <name>63_BOVIN</name>
 895                                                       <branch_length>0.1324</branch_length>
 896                                                       <taxonomy>
 897                                                          <code>BOVIN</code>
 898                                                       </taxonomy>
 899                                                    </clade>
 900                                                    <clade>
 901                                                       <name>80_BOVIN</name>
 902                                                       <branch_length>0.13424</branch_length>
 903                                                       <taxonomy>
 904                                                          <code>BOVIN</code>
 905                                                       </taxonomy>
 906                                                    </clade>
 907                                                 </clade>
 908                                                 <clade>
 909                                                    <branch_length>1.0E-5</branch_length>
 910                                                    <confidence type="bootstrap">51.0</confidence>
 911                                                    <events>
 912                                                       <duplications>1</duplications>
 913                                                    </events>
 914                                                    <clade>
 915                                                       <name>57_BOVIN</name>
 916                                                       <branch_length>0.01041</branch_length>
 917                                                       <taxonomy>
 918                                                          <code>BOVIN</code>
 919                                                       </taxonomy>
 920                                                    </clade>
 921                                                    <clade>
 922                                                       <branch_length>1.0E-5</branch_length>
 923                                                       <confidence type="bootstrap">20.0</confidence>
 924                                                       <events>
 925                                                          <duplications>1</duplications>
 926                                                       </events>
 927                                                       <clade>
 928                                                          <name>117_MOUSE</name>
 929                                                          <branch_length>1.0E-5</branch_length>
 930                                                          <taxonomy>
 931                                                             <code>MOUSE</code>
 932                                                          </taxonomy>
 933                                                       </clade>
 934                                                       <clade>
 935                                                          <branch_length>0.01043</branch_length>
 936                                                          <confidence type="bootstrap">66.0</confidence>
 937                                                          <events>
 938                                                             <speciations>1</speciations>
 939                                                          </events>
 940                                                          <clade>
 941                                                             <name>87_CANFA</name>
 942                                                             <branch_length>1.0E-5</branch_length>
 943                                                             <taxonomy>
 944                                                             <code>CANFA</code>
 945                                                             </taxonomy>
 946                                                          </clade>
 947                                                          <clade>
 948                                                             <name>1_HUMAN</name>
 949                                                             <branch_length>1.0E-5</branch_length>
 950                                                             <taxonomy>
 951                                                             <code>HUMAN</code>
 952                                                             </taxonomy>
 953                                                          </clade>
 954                                                       </clade>
 955                                                    </clade>
 956                                                 </clade>
 957                                              </clade>
 958                                           </clade>
 959                                        </clade>
 960                                     </clade>
 961                                  </clade>
 962                               </clade>
 963                               <clade>
 964                                  <name>25_BRAFL</name>
 965                                  <branch_length>0.4534</branch_length>
 966                                  <taxonomy>
 967                                     <code>BRAFL</code>
 968                                  </taxonomy>
 969                               </clade>
 970                            </clade>
 971                            <clade>
 972                               <name>15_SPHGR</name>
 973                               <branch_length>0.68488</branch_length>
 974                               <taxonomy>
 975                                  <code>SPHGR</code>
 976                               </taxonomy>
 977                            </clade>
 978                         </clade>
 979                         <clade>
 980                            <name>21_SPHGR</name>
 981                            <branch_length>1.05022</branch_length>
 982                            <taxonomy>
 983                               <code>SPHGR</code>
 984                            </taxonomy>
 985                         </clade>
 986                      </clade>
 987                      <clade>
 988                         <branch_length>0.08808</branch_length>
 989                         <confidence type="bootstrap">22.0</confidence>
 990                         <events>
 991                            <duplications>1</duplications>
 992                         </events>
 993                         <clade>
 994                            <name>33_NEMVE</name>
 995                            <branch_length>0.482</branch_length>
 996                            <taxonomy>
 997                               <code>NEMVE</code>
 998                            </taxonomy>
 999                         </clade>
1000                         <clade>
1001                            <name>30_NEMVE</name>
1002                            <branch_length>0.47217</branch_length>
1003                            <taxonomy>
1004                               <code>NEMVE</code>
1005                            </taxonomy>
1006                         </clade>
1007                      </clade>
1008                   </clade>
1009                   <clade>
1010                      <branch_length>0.28685</branch_length>
1011                      <confidence type="bootstrap">9.0</confidence>
1012                      <events>
1013                         <duplications>1</duplications>
1014                      </events>
1015                      <clade>
1016                         <branch_length>0.17977</branch_length>
1017                         <confidence type="bootstrap">14.0</confidence>
1018                         <events>
1019                            <duplications>1</duplications>
1020                         </events>
1021                         <clade>
1022                            <branch_length>0.4495</branch_length>
1023                            <confidence type="bootstrap">92.0</confidence>
1024                            <events>
1025                               <speciations>1</speciations>
1026                            </events>
1027                            <clade>
1028                               <branch_length>0.33029</branch_length>
1029                               <confidence type="bootstrap">89.0</confidence>
1030                               <events>
1031                                  <speciations>1</speciations>
1032                               </events>
1033                               <clade>
1034                                  <branch_length>0.13116</branch_length>
1035                                  <confidence type="bootstrap">61.0</confidence>
1036                                  <events>
1037                                     <duplications>1</duplications>
1038                                  </events>
1039                                  <clade>
1040                                     <name>165_BRARE</name>
1041                                     <branch_length>0.30255</branch_length>
1042                                     <taxonomy>
1043                                        <code>BRARE</code>
1044                                     </taxonomy>
1045                                  </clade>
1046                                  <clade>
1047                                     <name>162_BRARE</name>
1048                                     <branch_length>0.62996</branch_length>
1049                                     <taxonomy>
1050                                        <code>BRARE</code>
1051                                     </taxonomy>
1052                                  </clade>
1053                               </clade>
1054                               <clade>
1055                                  <branch_length>0.22822</branch_length>
1056                                  <confidence type="bootstrap">100.0</confidence>
1057                                  <events>
1058                                     <speciations>1</speciations>
1059                                  </events>
1060                                  <clade>
1061                                     <name>137_TETNG</name>
1062                                     <branch_length>0.24501</branch_length>
1063                                     <taxonomy>
1064                                        <code>TETNG</code>
1065                                     </taxonomy>
1066                                  </clade>
1067                                  <clade>
1068                                     <name>107_FUGRU</name>
1069                                     <branch_length>0.04204</branch_length>
1070                                     <taxonomy>
1071                                        <code>FUGRU</code>
1072                                     </taxonomy>
1073                                  </clade>
1074                               </clade>
1075                            </clade>
1076                            <clade>
1077                               <branch_length>0.25726</branch_length>
1078                               <confidence type="bootstrap">94.0</confidence>
1079                               <events>
1080                                  <duplications>1</duplications>
1081                               </events>
1082                               <clade>
1083                                  <branch_length>0.15529</branch_length>
1084                                  <confidence type="bootstrap">59.0</confidence>
1085                                  <events>
1086                                     <speciations>1</speciations>
1087                                  </events>
1088                                  <clade>
1089                                     <name>42_CHICK</name>
1090                                     <branch_length>0.29479</branch_length>
1091                                     <taxonomy>
1092                                        <code>CHICK</code>
1093                                     </taxonomy>
1094                                  </clade>
1095                                  <clade>
1096                                     <name>143_XENLA</name>
1097                                     <branch_length>0.60398</branch_length>
1098                                     <taxonomy>
1099                                        <code>XENLA</code>
1100                                     </taxonomy>
1101                                  </clade>
1102                               </clade>
1103                               <clade>
1104                                  <branch_length>0.13595</branch_length>
1105                                  <confidence type="bootstrap">100.0</confidence>
1106                                  <events>
1107                                     <duplications>1</duplications>
1108                                  </events>
1109                                  <clade>
1110                                     <name>58_BOVIN</name>
1111                                     <branch_length>0.05604</branch_length>
1112                                     <taxonomy>
1113                                        <code>BOVIN</code>
1114                                     </taxonomy>
1115                                  </clade>
1116                                  <clade>
1117                                     <branch_length>1.0E-5</branch_length>
1118                                     <confidence type="bootstrap">60.0</confidence>
1119                                     <events>
1120                                        <duplications>1</duplications>
1121                                     </events>
1122                                     <clade>
1123                                        <branch_length>0.02217</branch_length>
1124                                        <confidence type="bootstrap">78.0</confidence>
1125                                        <events>
1126                                           <duplications>1</duplications>
1127                                        </events>
1128                                        <clade>
1129                                           <branch_length>1.0E-5</branch_length>
1130                                           <confidence type="bootstrap">42.0</confidence>
1131                                           <events>
1132                                              <speciations>1</speciations>
1133                                           </events>
1134                                           <clade>
1135                                              <name>85_CANFA</name>
1136                                              <branch_length>0.01109</branch_length>
1137                                              <taxonomy>
1138                                                 <code>CANFA</code>
1139                                              </taxonomy>
1140                                           </clade>
1141                                           <clade>
1142                                              <name>2_HUMAN</name>
1143                                              <branch_length>0.01103</branch_length>
1144                                              <taxonomy>
1145                                                 <code>HUMAN</code>
1146                                              </taxonomy>
1147                                           </clade>
1148                                        </clade>
1149                                        <clade>
1150                                           <name>124_MOUSE</name>
1151                                           <branch_length>0.04504</branch_length>
1152                                           <taxonomy>
1153                                              <code>MOUSE</code>
1154                                           </taxonomy>
1155                                        </clade>
1156                                     </clade>
1157                                     <clade>
1158                                        <name>73_BOVIN</name>
1159                                        <branch_length>1.0E-5</branch_length>
1160                                        <taxonomy>
1161                                           <code>BOVIN</code>
1162                                        </taxonomy>
1163                                     </clade>
1164                                  </clade>
1165                               </clade>
1166                            </clade>
1167                         </clade>
1168                         <clade>
1169                            <branch_length>0.53052</branch_length>
1170                            <confidence type="bootstrap">100.0</confidence>
1171                            <events>
1172                               <speciations>1</speciations>
1173                            </events>
1174                            <clade>
1175                               <name>45_CHICK</name>
1176                               <branch_length>0.17601</branch_length>
1177                               <taxonomy>
1178                                  <code>CHICK</code>
1179                               </taxonomy>
1180                            </clade>
1181                            <clade>
1182                               <branch_length>0.40974</branch_length>
1183                               <confidence type="bootstrap">98.0</confidence>
1184                               <events>
1185                                  <duplications>1</duplications>
1186                               </events>
1187                               <clade>
1188                                  <branch_length>0.05702</branch_length>
1189                                  <confidence type="bootstrap">52.0</confidence>
1190                                  <events>
1191                                     <speciations>1</speciations>
1192                                  </events>
1193                                  <clade>
1194                                     <name>91_CANFA</name>
1195                                     <branch_length>0.10905</branch_length>
1196                                     <taxonomy>
1197                                        <code>CANFA</code>
1198                                     </taxonomy>
1199                                  </clade>
1200                                  <clade>
1201                                     <branch_length>0.06948</branch_length>
1202                                     <confidence type="bootstrap">63.0</confidence>
1203                                     <events>
1204                                        <speciations>1</speciations>
1205                                     </events>
1206                                     <clade>
1207                                        <branch_length>0.18193</branch_length>
1208                                        <confidence type="bootstrap">100.0</confidence>
1209                                        <events>
1210                                           <duplications>1</duplications>
1211                                        </events>
1212                                        <clade>
1213                                           <name>118_MOUSE</name>
1214                                           <branch_length>0.18633</branch_length>
1215                                           <taxonomy>
1216                                              <code>MOUSE</code>
1217                                           </taxonomy>
1218                                        </clade>
1219                                        <clade>
1220                                           <name>127_MOUSE</name>
1221                                           <branch_length>1.0E-5</branch_length>
1222                                           <taxonomy>
1223                                              <code>MOUSE</code>
1224                                           </taxonomy>
1225                                        </clade>
1226                                     </clade>
1227                                     <clade>
1228                                        <name>3_HUMAN</name>
1229                                        <branch_length>0.04341</branch_length>
1230                                        <taxonomy>
1231                                           <code>HUMAN</code>
1232                                        </taxonomy>
1233                                     </clade>
1234                                  </clade>
1235                               </clade>
1236                               <clade>
1237                                  <branch_length>0.09486</branch_length>
1238                                  <confidence type="bootstrap">100.0</confidence>
1239                                  <events>
1240                                     <duplications>1</duplications>
1241                                  </events>
1242                                  <clade>
1243                                     <name>76_BOVIN</name>
1244                                     <branch_length>1.0E-5</branch_length>
1245                                     <taxonomy>
1246                                        <code>BOVIN</code>
1247                                     </taxonomy>
1248                                  </clade>
1249                                  <clade>
1250                                     <name>71_BOVIN</name>
1251                                     <branch_length>1.0E-5</branch_length>
1252                                     <taxonomy>
1253                                        <code>BOVIN</code>
1254                                     </taxonomy>
1255                                  </clade>
1256                               </clade>
1257                            </clade>
1258                         </clade>
1259                      </clade>
1260                      <clade>
1261                         <branch_length>0.13006</branch_length>
1262                         <confidence type="bootstrap">23.0</confidence>
1263                         <events>
1264                            <speciations>1</speciations>
1265                         </events>
1266                         <clade>
1267                            <branch_length>0.40777</branch_length>
1268                            <confidence type="bootstrap">73.0</confidence>
1269                            <events>
1270                               <speciations>1</speciations>
1271                            </events>
1272                            <clade>
1273                               <branch_length>0.33571</branch_length>
1274                               <confidence type="bootstrap">100.0</confidence>
1275                               <events>
1276                                  <speciations>1</speciations>
1277                               </events>
1278                               <clade>
1279                                  <name>157_BRARE</name>
1280                                  <branch_length>0.2958</branch_length>
1281                                  <taxonomy>
1282                                     <code>BRARE</code>
1283                                  </taxonomy>
1284                               </clade>
1285                               <clade>
1286                                  <name>109_FUGRU</name>
1287                                  <branch_length>0.19527</branch_length>
1288                                  <taxonomy>
1289                                     <code>FUGRU</code>
1290                                  </taxonomy>
1291                               </clade>
1292                            </clade>
1293                            <clade>
1294                               <branch_length>0.1832</branch_length>
1295                               <confidence type="bootstrap">68.0</confidence>
1296                               <events>
1297                                  <duplications>1</duplications>
1298                               </events>
1299                               <clade>
1300                                  <branch_length>0.78705</branch_length>
1301                                  <confidence type="bootstrap">100.0</confidence>
1302                                  <events>
1303                                     <speciations>1</speciations>
1304                                  </events>
1305                                  <clade>
1306                                     <name>55_BOVIN</name>
1307                                     <branch_length>0.43001</branch_length>
1308                                     <taxonomy>
1309                                        <code>BOVIN</code>
1310                                     </taxonomy>
1311                                  </clade>
1312                                  <clade>
1313                                     <branch_length>0.08251</branch_length>
1314                                     <confidence type="bootstrap">65.0</confidence>
1315                                     <events>
1316                                        <speciations>1</speciations>
1317                                     </events>
1318                                     <clade>
1319                                        <name>119_MOUSE</name>
1320                                        <branch_length>0.64738</branch_length>
1321                                        <taxonomy>
1322                                           <code>MOUSE</code>
1323                                        </taxonomy>
1324                                     </clade>
1325                                     <clade>
1326                                        <name>10_HUMAN</name>
1327                                        <branch_length>0.18995</branch_length>
1328                                        <taxonomy>
1329                                           <code>HUMAN</code>
1330                                        </taxonomy>
1331                                     </clade>
1332                                  </clade>
1333                               </clade>
1334                               <clade>
1335                                  <branch_length>0.09353</branch_length>
1336                                  <confidence type="bootstrap">48.0</confidence>
1337                                  <events>
1338                                     <speciations>1</speciations>
1339                                  </events>
1340                                  <clade>
1341                                     <name>171_CHICK</name>
1342                                     <branch_length>0.56823</branch_length>
1343                                     <taxonomy>
1344                                        <code>CHICK</code>
1345                                     </taxonomy>
1346                                  </clade>
1347                                  <clade>
1348                                     <name>141_XENLA</name>
1349                                     <branch_length>0.57176</branch_length>
1350                                     <taxonomy>
1351                                        <code>XENLA</code>
1352                                     </taxonomy>
1353                                  </clade>
1354                               </clade>
1355                            </clade>
1356                         </clade>
1357                         <clade>
1358                            <name>40_CAEEL</name>
1359                            <branch_length>1.20795</branch_length>
1360                            <taxonomy>
1361                               <code>CAEEL</code>
1362                            </taxonomy>
1363                         </clade>
1364                      </clade>
1365                   </clade>
1366                </clade>
1367                <clade>
1368                   <branch_length>0.09583</branch_length>
1369                   <confidence type="bootstrap">8.0</confidence>
1370                   <events>
1371                      <duplications>1</duplications>
1372                   </events>
1373                   <clade>
1374                      <branch_length>0.03647</branch_length>
1375                      <confidence type="bootstrap">6.0</confidence>
1376                      <events>
1377                         <speciations>1</speciations>
1378                      </events>
1379                      <clade>
1380                         <branch_length>0.15942</branch_length>
1381                         <confidence type="bootstrap">15.0</confidence>
1382                         <events>
1383                            <duplications>1</duplications>
1384                         </events>
1385                         <clade>
1386                            <branch_length>0.37935</branch_length>
1387                            <confidence type="bootstrap">100.0</confidence>
1388                            <events>
1389                               <duplications>1</duplications>
1390                            </events>
1391                            <clade>
1392                               <branch_length>1.0E-5</branch_length>
1393                               <confidence type="bootstrap">65.0</confidence>
1394                               <events>
1395                                  <duplications>1</duplications>
1396                               </events>
1397                               <clade>
1398                                  <name>23_BRAFL</name>
1399                                  <branch_length>1.0E-5</branch_length>
1400                                  <taxonomy>
1401                                     <code>BRAFL</code>
1402                                  </taxonomy>
1403                               </clade>
1404                               <clade>
1405                                  <name>24_BRAFL</name>
1406                                  <branch_length>0.08958</branch_length>
1407                                  <taxonomy>
1408                                     <code>BRAFL</code>
1409                                  </taxonomy>
1410                               </clade>
1411                            </clade>
1412                            <clade>
1413                               <name>26_BRAFL</name>
1414                               <branch_length>1.0E-5</branch_length>
1415                               <taxonomy>
1416                                  <code>BRAFL</code>
1417                               </taxonomy>
1418                            </clade>
1419                         </clade>
1420                         <clade>
1421                            <branch_length>0.07297</branch_length>
1422                            <confidence type="bootstrap">24.0</confidence>
1423                            <events>
1424                               <speciations>1</speciations>
1425                            </events>
1426                            <clade>
1427                               <branch_length>0.74877</branch_length>
1428                               <confidence type="bootstrap">100.0</confidence>
1429                               <events>
1430                                  <speciations>1</speciations>
1431                               </events>
1432                               <clade>
1433                                  <branch_length>0.22523</branch_length>
1434                                  <confidence type="bootstrap">100.0</confidence>
1435                                  <events>
1436                                     <speciations>1</speciations>
1437                                  </events>
1438                                  <clade>
1439                                     <name>168_BRARE</name>
1440                                     <branch_length>0.13915</branch_length>
1441                                     <taxonomy>
1442                                        <code>BRARE</code>
1443                                     </taxonomy>
1444                                  </clade>
1445                                  <clade>
1446                                     <name>131_TETNG</name>
1447                                     <branch_length>0.07883</branch_length>
1448                                     <taxonomy>
1449                                        <code>TETNG</code>
1450                                     </taxonomy>
1451                                  </clade>
1452                               </clade>
1453                               <clade>
1454                                  <name>146_XENLA</name>
1455                                  <branch_length>0.27947</branch_length>
1456                                  <taxonomy>
1457                                     <code>XENLA</code>
1458                                  </taxonomy>
1459                               </clade>
1460                            </clade>
1461                            <clade>
1462                               <name>14_SPHGR</name>
1463                               <branch_length>0.61862</branch_length>
1464                               <taxonomy>
1465                                  <code>SPHGR</code>
1466                               </taxonomy>
1467                            </clade>
1468                         </clade>
1469                      </clade>
1470                      <clade>
1471                         <branch_length>0.145</branch_length>
1472                         <confidence type="bootstrap">29.0</confidence>
1473                         <events>
1474                            <duplications>1</duplications>
1475                         </events>
1476                         <clade>
1477                            <branch_length>0.14662</branch_length>
1478                            <confidence type="bootstrap">25.0</confidence>
1479                            <events>
1480                               <duplications>1</duplications>
1481                            </events>
1482                            <clade>
1483                               <name>35_NEMVE</name>
1484                               <branch_length>0.49481</branch_length>
1485                               <taxonomy>
1486                                  <code>NEMVE</code>
1487                               </taxonomy>
1488                            </clade>
1489                            <clade>
1490                               <name>38_NEMVE</name>
1491                               <branch_length>0.35293</branch_length>
1492                               <taxonomy>
1493                                  <code>NEMVE</code>
1494                               </taxonomy>
1495                            </clade>
1496                         </clade>
1497                         <clade>
1498                            <name>34_NEMVE</name>
1499                            <branch_length>0.32221</branch_length>
1500                            <taxonomy>
1501                               <code>NEMVE</code>
1502                            </taxonomy>
1503                         </clade>
1504                      </clade>
1505                   </clade>
1506                   <clade>
1507                      <branch_length>0.40409</branch_length>
1508                      <confidence type="bootstrap">89.0</confidence>
1509                      <events>
1510                         <speciations>1</speciations>
1511                      </events>
1512                      <clade>
1513                         <branch_length>0.10452</branch_length>
1514                         <confidence type="bootstrap">28.0</confidence>
1515                         <events>
1516                            <duplications>1</duplications>
1517                         </events>
1518                         <clade>
1519                            <branch_length>0.1139</branch_length>
1520                            <confidence type="bootstrap">41.0</confidence>
1521                            <events>
1522                               <duplications>1</duplications>
1523                            </events>
1524                            <clade>
1525                               <branch_length>0.18551</branch_length>
1526                               <confidence type="bootstrap">35.0</confidence>
1527                               <events>
1528                                  <speciations>1</speciations>
1529                               </events>
1530                               <clade>
1531                                  <branch_length>0.13606</branch_length>
1532                                  <confidence type="bootstrap">92.0</confidence>
1533                                  <events>
1534                                     <duplications>1</duplications>
1535                                  </events>
1536                                  <clade>
1537                                     <branch_length>0.05378</branch_length>
1538                                     <confidence type="bootstrap">57.0</confidence>
1539                                     <events>
1540                                        <speciations>1</speciations>
1541                                     </events>
1542                                     <clade>
1543                                        <branch_length>0.11874</branch_length>
1544                                        <confidence type="bootstrap">90.0</confidence>
1545                                        <events>
1546                                           <speciations>1</speciations>
1547                                        </events>
1548                                        <clade>
1549                                           <name>110_FUGRU</name>
1550                                           <branch_length>0.56162</branch_length>
1551                                           <taxonomy>
1552                                              <code>FUGRU</code>
1553                                           </taxonomy>
1554                                        </clade>
1555                                        <clade>
1556                                           <name>134_TETNG</name>
1557                                           <branch_length>0.03296</branch_length>
1558                                           <taxonomy>
1559                                              <code>TETNG</code>
1560                                           </taxonomy>
1561                                        </clade>
1562                                     </clade>
1563                                     <clade>
1564                                        <branch_length>0.091</branch_length>
1565                                        <confidence type="bootstrap">66.0</confidence>
1566                                        <events>
1567                                           <speciations>1</speciations>
1568                                        </events>
1569                                        <clade>
1570                                           <branch_length>0.04421</branch_length>
1571                                           <confidence type="bootstrap">62.0</confidence>
1572                                           <events>
1573                                              <speciations>1</speciations>
1574                                           </events>
1575                                           <clade>
1576                                              <branch_length>0.13167</branch_length>
1577                                              <confidence type="bootstrap">94.0</confidence>
1578                                              <events>
1579                                                 <duplications>1</duplications>
1580                                              </events>
1581                                              <clade>
1582                                                 <name>7_HUMAN</name>
1583                                                 <branch_length>1.0E-5</branch_length>
1584                                                 <taxonomy>
1585                                                    <code>HUMAN</code>
1586                                                 </taxonomy>
1587                                              </clade>
1588                                              <clade>
1589                                                 <branch_length>0.01865</branch_length>
1590                                                 <confidence type="bootstrap">61.0</confidence>
1591                                                 <events>
1592                                                    <speciations>1</speciations>
1593                                                 </events>
1594                                                 <clade>
1595                                                    <branch_length>0.51198</branch_length>
1596                                                    <confidence type="bootstrap">100.0</confidence>
1597                                                    <events>
1598                                                       <speciations>1</speciations>
1599                                                    </events>
1600                                                    <clade>
1601                                                       <name>89_CANFA</name>
1602                                                       <branch_length>0.01988</branch_length>
1603                                                       <taxonomy>
1604                                                          <code>CANFA</code>
1605                                                       </taxonomy>
1606                                                    </clade>
1607                                                    <clade>
1608                                                       <name>62_BOVIN</name>
1609                                                       <branch_length>1.0E-5</branch_length>
1610                                                       <taxonomy>
1611                                                          <code>BOVIN</code>
1612                                                       </taxonomy>
1613                                                    </clade>
1614                                                 </clade>
1615                                                 <clade>
1616                                                    <name>114_MOUSE</name>
1617                                                    <branch_length>0.01315</branch_length>
1618                                                    <taxonomy>
1619                                                       <code>MOUSE</code>
1620                                                    </taxonomy>
1621                                                 </clade>
1622                                              </clade>
1623                                           </clade>
1624                                           <clade>
1625                                              <name>48_CHICK</name>
1626                                              <branch_length>1.0E-5</branch_length>
1627                                              <taxonomy>
1628                                                 <code>CHICK</code>
1629                                              </taxonomy>
1630                                           </clade>
1631                                        </clade>
1632                                        <clade>
1633                                           <name>150_XENLA</name>
1634                                           <branch_length>0.0853</branch_length>
1635                                           <taxonomy>
1636                                              <code>XENLA</code>
1637                                           </taxonomy>
1638                                        </clade>
1639                                     </clade>
1640                                  </clade>
1641                                  <clade>
1642                                     <branch_length>1.0E-5</branch_length>
1643                                     <confidence type="bootstrap">38.0</confidence>
1644                                     <events>
1645                                        <speciations>1</speciations>
1646                                     </events>
1647                                     <clade>
1648                                        <branch_length>0.19569</branch_length>
1649                                        <confidence type="bootstrap">100.0</confidence>
1650                                        <events>
1651                                           <speciations>1</speciations>
1652                                        </events>
1653                                        <clade>
1654                                           <name>101_FUGRU</name>
1655                                           <branch_length>0.02185</branch_length>
1656                                           <taxonomy>
1657                                              <code>FUGRU</code>
1658                                           </taxonomy>
1659                                        </clade>
1660                                        <clade>
1661                                           <name>133_TETNG</name>
1662                                           <branch_length>0.00907</branch_length>
1663                                           <taxonomy>
1664                                              <code>TETNG</code>
1665                                           </taxonomy>
1666                                        </clade>
1667                                     </clade>
1668                                     <clade>
1669                                        <branch_length>0.1765</branch_length>
1670                                        <confidence type="bootstrap">100.0</confidence>
1671                                        <events>
1672                                           <duplications>1</duplications>
1673                                        </events>
1674                                        <clade>
1675                                           <name>160_BRARE</name>
1676                                           <branch_length>1.0E-5</branch_length>
1677                                           <taxonomy>
1678                                              <code>BRARE</code>
1679                                           </taxonomy>
1680                                        </clade>
1681                                        <clade>
1682                                           <name>161_BRARE</name>
1683                                           <branch_length>1.0E-5</branch_length>
1684                                           <taxonomy>
1685                                              <code>BRARE</code>
1686                                           </taxonomy>
1687                                        </clade>
1688                                     </clade>
1689                                  </clade>
1690                               </clade>
1691                               <clade>
1692                                  <branch_length>0.43964</branch_length>
1693                                  <confidence type="bootstrap">100.0</confidence>
1694                                  <events>
1695                                     <duplications>1</duplications>
1696                                  </events>
1697                                  <clade>
1698                                     <name>98_DROME</name>
1699                                     <branch_length>0.38195</branch_length>
1700                                     <taxonomy>
1701                                        <code>DROME</code>
1702                                     </taxonomy>
1703                                  </clade>
1704                                  <clade>
1705                                     <name>99_DROME</name>
1706                                     <branch_length>0.30802</branch_length>
1707                                     <taxonomy>
1708                                        <code>DROME</code>
1709                                     </taxonomy>
1710                                  </clade>
1711                               </clade>
1712                            </clade>
1713                            <clade>
1714                               <branch_length>0.18404</branch_length>
1715                               <confidence type="bootstrap">45.0</confidence>
1716                               <events>
1717                                  <speciations>1</speciations>
1718                               </events>
1719                               <clade>
1720                                  <name>22_BRAFL</name>
1721                                  <branch_length>0.39195</branch_length>
1722                                  <taxonomy>
1723                                     <code>BRAFL</code>
1724                                  </taxonomy>
1725                               </clade>
1726                               <clade>
1727                                  <name>18_SPHGR</name>
1728                                  <branch_length>0.4734</branch_length>
1729                                  <taxonomy>
1730                                     <code>SPHGR</code>
1731                                  </taxonomy>
1732                               </clade>
1733                            </clade>
1734                         </clade>
1735                         <clade>
1736                            <name>20_SPHGR</name>
1737                            <branch_length>0.64378</branch_length>
1738                            <taxonomy>
1739                               <code>SPHGR</code>
1740                            </taxonomy>
1741                         </clade>
1742                      </clade>
1743                      <clade>
1744                         <branch_length>0.06108</branch_length>
1745                         <confidence type="bootstrap">45.0</confidence>
1746                         <events>
1747                            <duplications>1</duplications>
1748                         </events>
1749                         <clade>
1750                            <name>39_NEMVE</name>
1751                            <branch_length>0.56478</branch_length>
1752                            <taxonomy>
1753                               <code>NEMVE</code>
1754                            </taxonomy>
1755                         </clade>
1756                         <clade>
1757                            <branch_length>0.12162</branch_length>
1758                            <confidence type="bootstrap">57.0</confidence>
1759                            <events>
1760                               <duplications>1</duplications>
1761                            </events>
1762                            <clade>
1763                               <branch_length>0.46294</branch_length>
1764                               <confidence type="bootstrap">100.0</confidence>
1765                               <events>
1766                                  <duplications>1</duplications>
1767                               </events>
1768                               <clade>
1769                                  <name>37_NEMVE</name>
1770                                  <branch_length>1.0E-5</branch_length>
1771                                  <taxonomy>
1772                                     <code>NEMVE</code>
1773                                  </taxonomy>
1774                               </clade>
1775                               <clade>
1776                                  <name>29_NEMVE</name>
1777                                  <branch_length>1.0E-5</branch_length>
1778                                  <taxonomy>
1779                                     <code>NEMVE</code>
1780                                  </taxonomy>
1781                               </clade>
1782                            </clade>
1783                            <clade>
1784                               <name>31_NEMVE</name>
1785                               <branch_length>0.56073</branch_length>
1786                               <taxonomy>
1787                                  <code>NEMVE</code>
1788                               </taxonomy>
1789                            </clade>
1790                         </clade>
1791                      </clade>
1792                   </clade>
1793                </clade>
1794             </clade>
1795             <clade>
1796                <branch_length>0.11059</branch_length>
1797                <confidence type="bootstrap">29.0</confidence>
1798                <events>
1799                   <duplications>1</duplications>
1800                </events>
1801                <clade>
1802                   <branch_length>0.24695</branch_length>
1803                   <confidence type="bootstrap">52.0</confidence>
1804                   <events>
1805                      <duplications>1</duplications>
1806                   </events>
1807                   <clade>
1808                      <name>172_XENLA</name>
1809                      <branch_length>0.53649</branch_length>
1810                      <taxonomy>
1811                         <code>XENLA</code>
1812                      </taxonomy>
1813                   </clade>
1814                   <clade>
1815                      <branch_length>0.09295</branch_length>
1816                      <confidence type="bootstrap">50.0</confidence>
1817                      <events>
1818                         <duplications>1</duplications>
1819                      </events>
1820                      <clade>
1821                         <branch_length>0.14603</branch_length>
1822                         <confidence type="bootstrap">87.0</confidence>
1823                         <events>
1824                            <speciations>1</speciations>
1825                         </events>
1826                         <clade>
1827                            <branch_length>0.09214</branch_length>
1828                            <confidence type="bootstrap">65.0</confidence>
1829                            <events>
1830                               <speciations>1</speciations>
1831                            </events>
1832                            <clade>
1833                               <name>19_SPHGR</name>
1834                               <branch_length>0.37571</branch_length>
1835                               <taxonomy>
1836                                  <code>SPHGR</code>
1837                               </taxonomy>
1838                            </clade>
1839                            <clade>
1840                               <branch_length>0.09991</branch_length>
1841                               <confidence type="bootstrap">100.0</confidence>
1842                               <events>
1843                                  <duplications>1</duplications>
1844                               </events>
1845                               <clade>
1846                                  <name>28_BRAFL</name>
1847                                  <branch_length>1.0E-5</branch_length>
1848                                  <taxonomy>
1849                                     <code>BRAFL</code>
1850                                  </taxonomy>
1851                               </clade>
1852                               <clade>
1853                                  <name>27_BRAFL</name>
1854                                  <branch_length>1.0E-5</branch_length>
1855                                  <taxonomy>
1856                                     <code>BRAFL</code>
1857                                  </taxonomy>
1858                               </clade>
1859                            </clade>
1860                         </clade>
1861                         <clade>
1862                            <name>36_NEMVE</name>
1863                            <branch_length>0.36151</branch_length>
1864                            <taxonomy>
1865                               <code>NEMVE</code>
1866                            </taxonomy>
1867                         </clade>
1868                      </clade>
1869                      <clade>
1870                         <branch_length>0.34289</branch_length>
1871                         <confidence type="bootstrap">100.0</confidence>
1872                         <events>
1873                            <speciations>1</speciations>
1874                         </events>
1875                         <clade>
1876                            <name>50_CHICK</name>
1877                            <branch_length>0.05827</branch_length>
1878                            <taxonomy>
1879                               <code>CHICK</code>
1880                            </taxonomy>
1881                         </clade>
1882                         <clade>
1883                            <branch_length>0.22124</branch_length>
1884                            <confidence type="bootstrap">92.0</confidence>
1885                            <events>
1886                               <duplications>1</duplications>
1887                            </events>
1888                            <clade>
1889                               <name>170_MOUSE</name>
1890                               <branch_length>0.17237</branch_length>
1891                               <taxonomy>
1892                                  <code>MOUSE</code>
1893                               </taxonomy>
1894                            </clade>
1895                            <clade>
1896                               <branch_length>1.0E-5</branch_length>
1897                               <confidence type="bootstrap">59.0</confidence>
1898                               <events>
1899                                  <duplications>1</duplications>
1900                               </events>
1901                               <clade>
1902                                  <name>67_BOVIN</name>
1903                                  <branch_length>0.05006</branch_length>
1904                                  <taxonomy>
1905                                     <code>BOVIN</code>
1906                                  </taxonomy>
1907                               </clade>
1908                               <clade>
1909                                  <branch_length>0.00337</branch_length>
1910                                  <confidence type="bootstrap">81.0</confidence>
1911                                  <events>
1912                                     <speciations>1</speciations>
1913                                  </events>
1914                                  <clade>
1915                                     <name>84_CANFA</name>
1916                                     <branch_length>0.01072</branch_length>
1917                                     <taxonomy>
1918                                        <code>CANFA</code>
1919                                     </taxonomy>
1920                                  </clade>
1921                                  <clade>
1922                                     <branch_length>0.02097</branch_length>
1923                                     <confidence type="bootstrap">98.0</confidence>
1924                                     <events>
1925                                        <duplications>1</duplications>
1926                                     </events>
1927                                     <clade>
1928                                        <name>6_HUMAN</name>
1929                                        <branch_length>0.02091</branch_length>
1930                                        <taxonomy>
1931                                           <code>HUMAN</code>
1932                                        </taxonomy>
1933                                     </clade>
1934                                     <clade>
1935                                        <name>5_HUMAN</name>
1936                                        <branch_length>0.01043</branch_length>
1937                                        <taxonomy>
1938                                           <code>HUMAN</code>
1939                                        </taxonomy>
1940                                     </clade>
1941                                  </clade>
1942                               </clade>
1943                            </clade>
1944                         </clade>
1945                      </clade>
1946                   </clade>
1947                </clade>
1948                <clade>
1949                   <branch_length>0.20775</branch_length>
1950                   <confidence type="bootstrap">73.0</confidence>
1951                   <events>
1952                      <speciations>1</speciations>
1953                   </events>
1954                   <clade>
1955                      <name>32_NEMVE</name>
1956                      <branch_length>0.30744</branch_length>
1957                      <taxonomy>
1958                         <code>NEMVE</code>
1959                      </taxonomy>
1960                   </clade>
1961                   <clade>
1962                      <branch_length>0.27579</branch_length>
1963                      <confidence type="bootstrap">64.0</confidence>
1964                      <events>
1965                         <speciations>1</speciations>
1966                      </events>
1967                      <clade>
1968                         <name>53_CIOIN</name>
1969                         <branch_length>0.40206</branch_length>
1970                         <taxonomy>
1971                            <code>CIOIN</code>
1972                         </taxonomy>
1973                      </clade>
1974                      <clade>
1975                         <branch_length>0.28261</branch_length>
1976                         <confidence type="bootstrap">92.0</confidence>
1977                         <events>
1978                            <speciations>1</speciations>
1979                         </events>
1980                         <clade>
1981                            <branch_length>0.05338</branch_length>
1982                            <confidence type="bootstrap">67.0</confidence>
1983                            <events>
1984                               <duplications>1</duplications>
1985                            </events>
1986                            <clade>
1987                               <name>156_BRAREb</name>
1988                               <branch_length>0.64914</branch_length>
1989                               <taxonomy>
1990                                  <code>BRARE</code>
1991                               </taxonomy>
1992                            </clade>
1993                            <clade>
1994                               <branch_length>0.0829</branch_length>
1995                               <confidence type="bootstrap">70.0</confidence>
1996                               <events>
1997                                  <speciations>1</speciations>
1998                               </events>
1999                               <clade>
2000                                  <name>156_BRAREa</name>
2001                                  <branch_length>0.18704</branch_length>
2002                                  <taxonomy>
2003                                     <code>BRARE</code>
2004                                  </taxonomy>
2005                               </clade>
2006                               <clade>
2007                                  <branch_length>0.03919</branch_length>
2008                                  <confidence type="bootstrap">100.0</confidence>
2009                                  <events>
2010                                     <speciations>1</speciations>
2011                                  </events>
2012                                  <clade>
2013                                     <name>138_TETNG</name>
2014                                     <branch_length>0.03397</branch_length>
2015                                     <taxonomy>
2016                                        <code>TETNG</code>
2017                                     </taxonomy>
2018                                  </clade>
2019                                  <clade>
2020                                     <name>173_FUGRU</name>
2021                                     <branch_length>1.0E-5</branch_length>
2022                                     <taxonomy>
2023                                        <code>FUGRU</code>
2024                                     </taxonomy>
2025                                  </clade>
2026                               </clade>
2027                            </clade>
2028                         </clade>
2029                         <clade>
2030                            <branch_length>0.15101</branch_length>
2031                            <confidence type="bootstrap">78.0</confidence>
2032                            <events>
2033                               <speciations>1</speciations>
2034                            </events>
2035                            <clade>
2036                               <name>153_XENLA</name>
2037                               <branch_length>0.15191</branch_length>
2038                               <taxonomy>
2039                                  <code>XENLA</code>
2040                               </taxonomy>
2041                            </clade>
2042                            <clade>
2043                               <branch_length>0.24267</branch_length>
2044                               <confidence type="bootstrap">100.0</confidence>
2045                               <events>
2046                                  <duplications>1</duplications>
2047                               </events>
2048                               <clade>
2049                                  <name>116_MOUSE</name>
2050                                  <branch_length>1.0E-5</branch_length>
2051                                  <taxonomy>
2052                                     <code>MOUSE</code>
2053                                  </taxonomy>
2054                               </clade>
2055                               <clade>
2056                                  <branch_length>0.04527</branch_length>
2057                                  <confidence type="bootstrap">49.0</confidence>
2058                                  <events>
2059                                     <speciations>1</speciations>
2060                                  </events>
2061                                  <clade>
2062                                     <name>4_HUMAN</name>
2063                                     <branch_length>1.0E-5</branch_length>
2064                                     <taxonomy>
2065                                        <code>HUMAN</code>
2066                                     </taxonomy>
2067                                  </clade>
2068                                  <clade>
2069                                     <branch_length>0.011</branch_length>
2070                                     <confidence type="bootstrap">37.0</confidence>
2071                                     <events>
2072                                        <speciations>1</speciations>
2073                                     </events>
2074                                     <clade>
2075                                        <name>94_CANFA</name>
2076                                        <branch_length>1.0E-5</branch_length>
2077                                        <taxonomy>
2078                                           <code>CANFA</code>
2079                                        </taxonomy>
2080                                     </clade>
2081                                     <clade>
2082                                        <name>82_BOVIN</name>
2083                                        <branch_length>1.0E-5</branch_length>
2084                                        <taxonomy>
2085                                           <code>BOVIN</code>
2086                                        </taxonomy>
2087                                     </clade>
2088                                  </clade>
2089                               </clade>
2090                            </clade>
2091                         </clade>
2092                      </clade>
2093                   </clade>
2094                </clade>
2095             </clade>
2096          </clade>
2097       </clade>
2098    </phylogeny>
2099 </phyloxml>