forester/aptx/aptx_example_files/tol_hominidae.tol

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   2
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   5     <NAME><![CDATA[Hominidae]]></NAME>
   6     <DESCRIPTION><![CDATA[(humans, gorilla, chimpanzee, bonobo, orangutan)]]></DESCRIPTION>
   7     <AUTHORITY></AUTHORITY>
   8     <NAMECOMMENT></NAMECOMMENT>
   9     <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
  10     <AUTHDATE>null</AUTHDATE>
  11     <OTHERNAMES>
  12       <OTHERNAME ISIMPORTANT="1" ISPREFERRED="0" SEQUENCE="0" DATE="0" ITALICIZENAME="0">
  13         <NAME><![CDATA[Humans, great apes, and their extinct relatives]]></NAME>
  14         <AUTHORITY></AUTHORITY>
  15         <COMMENTS></COMMENTS>
  16       </OTHERNAME>
  17     </OTHERNAMES>
  18     <NODES>
  19       <NODE EXTINCT="0" ID="16410" CONFIDENCE="0" PHYLESIS="0" LEAF="0" HASPAGE="1" ANCESTORWITHPAGE="16299" ITALICIZENAME="1" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="2">
  20         <NAME><![CDATA[Pongo]]></NAME>
  21         <DESCRIPTION><![CDATA[(orangutan)]]></DESCRIPTION>
  22         <AUTHORITY></AUTHORITY>
  23         <NAMECOMMENT></NAMECOMMENT>
  24         <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
  25         <AUTHDATE>null</AUTHDATE>
  26         <OTHERNAMES>
  27           <OTHERNAME ISIMPORTANT="1" ISPREFERRED="0" SEQUENCE="0" DATE="null" ITALICIZENAME="0">
  28             <NAME><![CDATA[Orangutan]]></NAME>
  29             <AUTHORITY></AUTHORITY>
  30             <COMMENTS></COMMENTS>
  31           </OTHERNAME>
  32         </OTHERNAMES>
  33         <NODES>
  34           <NODE EXTINCT="0" ID="65353" CONFIDENCE="0" PHYLESIS="0" LEAF="1" HASPAGE="0" ANCESTORWITHPAGE="16410" ITALICIZENAME="1" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="0">
  35             <NAME><![CDATA[Pongo abelii]]></NAME>
  36             <DESCRIPTION></DESCRIPTION>
  37             <AUTHORITY></AUTHORITY>
  38             <NAMECOMMENT></NAMECOMMENT>
  39             <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
  40             <AUTHDATE>null</AUTHDATE>
  41           </NODE>
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  43             <NAME><![CDATA[Pongo pygmaeus]]></NAME>
  44             <DESCRIPTION></DESCRIPTION>
  45             <AUTHORITY></AUTHORITY>
  46             <NAMECOMMENT></NAMECOMMENT>
  47             <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
  48             <AUTHDATE>null</AUTHDATE>
  49           </NODE>
  50         </NODES>
  51       </NODE>
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  53         <NAME></NAME>
  54         <DESCRIPTION></DESCRIPTION>
  55         <AUTHORITY></AUTHORITY>
  56         <NAMECOMMENT></NAMECOMMENT>
  57         <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
  58         <AUTHDATE>null</AUTHDATE>
  59         <NODES>
  60           <NODE EXTINCT="0" ID="16412" CONFIDENCE="0" PHYLESIS="0" LEAF="0" HASPAGE="0" ANCESTORWITHPAGE="16299" ITALICIZENAME="0" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="2">
  61             <NAME></NAME>
  62             <DESCRIPTION></DESCRIPTION>
  63             <AUTHORITY></AUTHORITY>
  64             <NAMECOMMENT></NAMECOMMENT>
  65             <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
  66             <AUTHDATE>null</AUTHDATE>
  67             <NODES>
  68               <NODE EXTINCT="0" ID="16413" CONFIDENCE="0" PHYLESIS="0" LEAF="0" HASPAGE="1" ANCESTORWITHPAGE="16299" ITALICIZENAME="1" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="2">
  69                 <NAME><![CDATA[Pan]]></NAME>
  70                 <DESCRIPTION><![CDATA[(chimpanzee and bonobo)]]></DESCRIPTION>
  71                 <AUTHORITY></AUTHORITY>
  72                 <NAMECOMMENT></NAMECOMMENT>
  73                 <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
  74                 <AUTHDATE>null</AUTHDATE>
  75                 <OTHERNAMES>
  76                   <OTHERNAME ISIMPORTANT="1" ISPREFERRED="0" SEQUENCE="0" DATE="null" ITALICIZENAME="0">
  77                     <NAME><![CDATA[Chimpanzees]]></NAME>
  78                     <AUTHORITY></AUTHORITY>
  79                     <COMMENTS></COMMENTS>
  80                   </OTHERNAME>
  81                 </OTHERNAMES>
  82                 <NODES>
  83                   <NODE EXTINCT="0" ID="26564" CONFIDENCE="0" PHYLESIS="0" LEAF="1" HASPAGE="0" ANCESTORWITHPAGE="16413" ITALICIZENAME="1" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="0">
  84                     <NAME><![CDATA[Pan paniscus]]></NAME>
  85                     <DESCRIPTION><![CDATA[(bonobo or pygmy chimpanzee)]]></DESCRIPTION>
  86                     <AUTHORITY></AUTHORITY>
  87                     <NAMECOMMENT></NAMECOMMENT>
  88                     <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
  89                     <AUTHDATE>null</AUTHDATE>
  90                     <OTHERNAMES>
  91                       <OTHERNAME ISIMPORTANT="1" ISPREFERRED="0" SEQUENCE="0" DATE="null" ITALICIZENAME="0">
  92                         <NAME><![CDATA[Bonobo]]></NAME>
  93                         <AUTHORITY></AUTHORITY>
  94                         <COMMENTS></COMMENTS>
  95                       </OTHERNAME>
  96                       <OTHERNAME ISIMPORTANT="1" ISPREFERRED="0" SEQUENCE="1" DATE="null" ITALICIZENAME="0">
  97                         <NAME><![CDATA[Pygmy chimpanzee]]></NAME>
  98                         <AUTHORITY></AUTHORITY>
  99                         <COMMENTS></COMMENTS>
 100                       </OTHERNAME>
 101                       <OTHERNAME ISIMPORTANT="0" ISPREFERRED="0" SEQUENCE="2" DATE="null" ITALICIZENAME="0">
 102                         <NAME><![CDATA[Pygmy chimp]]></NAME>
 103                         <AUTHORITY></AUTHORITY>
 104                         <COMMENTS></COMMENTS>
 105                       </OTHERNAME>
 106                     </OTHERNAMES>
 107                   </NODE>
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 109                     <NAME><![CDATA[Pan troglodytes]]></NAME>
 110                     <DESCRIPTION><![CDATA[(chimpanzee)]]></DESCRIPTION>
 111                     <AUTHORITY></AUTHORITY>
 112                     <NAMECOMMENT></NAMECOMMENT>
 113                     <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
 114                     <AUTHDATE>null</AUTHDATE>
 115                     <OTHERNAMES>
 116                       <OTHERNAME ISIMPORTANT="1" ISPREFERRED="0" SEQUENCE="0" DATE="null" ITALICIZENAME="0">
 117                         <NAME><![CDATA[Chimpanzee]]></NAME>
 118                         <AUTHORITY></AUTHORITY>
 119                         <COMMENTS></COMMENTS>
 120                       </OTHERNAME>
 121                     </OTHERNAMES>
 122                   </NODE>
 123                 </NODES>
 124               </NODE>
 125               <NODE EXTINCT="0" ID="16414" CONFIDENCE="0" PHYLESIS="0" LEAF="0" HASPAGE="0" ANCESTORWITHPAGE="16299" ITALICIZENAME="0" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="2">
 126                 <NAME></NAME>
 127                 <DESCRIPTION></DESCRIPTION>
 128                 <AUTHORITY></AUTHORITY>
 129                 <NAMECOMMENT></NAMECOMMENT>
 130                 <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
 131                 <AUTHDATE>null</AUTHDATE>
 132                 <NODES>
 133                   <NODE EXTINCT="2" ID="16415" CONFIDENCE="0" PHYLESIS="0" LEAF="0" HASPAGE="0" ANCESTORWITHPAGE="16299" ITALICIZENAME="1" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="0">
 134                     <NAME><![CDATA[Ardipithecus]]></NAME>
 135                     <DESCRIPTION></DESCRIPTION>
 136                     <AUTHORITY></AUTHORITY>
 137                     <NAMECOMMENT></NAMECOMMENT>
 138                     <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
 139                     <AUTHDATE>null</AUTHDATE>
 140                   </NODE>
 141                   <NODE EXTINCT="0" ID="16416" CONFIDENCE="0" PHYLESIS="0" LEAF="0" HASPAGE="0" ANCESTORWITHPAGE="16299" ITALICIZENAME="0" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="2">
 142                     <NAME></NAME>
 143                     <DESCRIPTION></DESCRIPTION>
 144                     <AUTHORITY></AUTHORITY>
 145                     <NAMECOMMENT></NAMECOMMENT>
 146                     <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
 147                     <AUTHDATE>null</AUTHDATE>
 148                     <NODES>
 149                       <NODE EXTINCT="2" ID="16417" CONFIDENCE="0" PHYLESIS="1" LEAF="0" HASPAGE="0" ANCESTORWITHPAGE="16299" ITALICIZENAME="1" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="0">
 150                         <NAME><![CDATA[Australopithecus]]></NAME>
 151                         <DESCRIPTION></DESCRIPTION>
 152                         <AUTHORITY></AUTHORITY>
 153                         <NAMECOMMENT></NAMECOMMENT>
 154                         <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
 155                         <AUTHDATE>null</AUTHDATE>
 156                       </NODE>
 157                       <NODE EXTINCT="0" ID="16418" CONFIDENCE="0" PHYLESIS="0" LEAF="0" HASPAGE="1" ANCESTORWITHPAGE="16299" ITALICIZENAME="1" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="5">
 158                         <NAME><![CDATA[Homo]]></NAME>
 159                         <DESCRIPTION><![CDATA[(humans)]]></DESCRIPTION>
 160                         <AUTHORITY></AUTHORITY>
 161                         <NAMECOMMENT></NAMECOMMENT>
 162                         <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
 163                         <AUTHDATE>null</AUTHDATE>
 164                         <OTHERNAMES>
 165                           <OTHERNAME ISIMPORTANT="1" ISPREFERRED="0" SEQUENCE="0" DATE="null" ITALICIZENAME="0">
 166                             <NAME><![CDATA[Humans]]></NAME>
 167                             <AUTHORITY></AUTHORITY>
 168                             <COMMENTS></COMMENTS>
 169                           </OTHERNAME>
 170                         </OTHERNAMES>
 171                         <NODES>
 172                           <NODE EXTINCT="0" ID="16421" CONFIDENCE="0" PHYLESIS="0" LEAF="1" HASPAGE="1" ANCESTORWITHPAGE="16418" ITALICIZENAME="1" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="0">
 173                             <NAME><![CDATA[Homo sapiens]]></NAME>
 174                             <DESCRIPTION><![CDATA[(modern humans)]]></DESCRIPTION>
 175                             <AUTHORITY></AUTHORITY>
 176                             <NAMECOMMENT></NAMECOMMENT>
 177                             <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
 178                             <AUTHDATE>0</AUTHDATE>
 179                             <OTHERNAMES>
 180                               <OTHERNAME ISIMPORTANT="1" ISPREFERRED="0" SEQUENCE="0" DATE="0" ITALICIZENAME="0">
 181                                 <NAME><![CDATA[Modern humans]]></NAME>
 182                                 <AUTHORITY></AUTHORITY>
 183                                 <COMMENTS></COMMENTS>
 184                               </OTHERNAME>
 185                             </OTHERNAMES>
 186                           </NODE>
 187                           <NODE EXTINCT="2" ID="16422" CONFIDENCE="0" PHYLESIS="0" LEAF="1" HASPAGE="0" ANCESTORWITHPAGE="16418" ITALICIZENAME="1" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="0">
 188                             <NAME><![CDATA[Homo erectus]]></NAME>
 189                             <DESCRIPTION></DESCRIPTION>
 190                             <AUTHORITY></AUTHORITY>
 191                             <NAMECOMMENT></NAMECOMMENT>
 192                             <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
 193                             <AUTHDATE>0</AUTHDATE>
 194                           </NODE>
 195                           <NODE EXTINCT="2" ID="16423" CONFIDENCE="0" PHYLESIS="0" LEAF="1" HASPAGE="0" ANCESTORWITHPAGE="16418" ITALICIZENAME="1" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="0">
 196                             <NAME><![CDATA[Homo ergaster]]></NAME>
 197                             <DESCRIPTION></DESCRIPTION>
 198                             <AUTHORITY></AUTHORITY>
 199                             <NAMECOMMENT></NAMECOMMENT>
 200                             <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
 201                             <AUTHDATE>0</AUTHDATE>
 202                           </NODE>
 203                           <NODE EXTINCT="2" ID="16424" CONFIDENCE="0" PHYLESIS="0" LEAF="1" HASPAGE="0" ANCESTORWITHPAGE="16418" ITALICIZENAME="1" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="0">
 204                             <NAME><![CDATA[Homo rudolfensis]]></NAME>
 205                             <DESCRIPTION></DESCRIPTION>
 206                             <AUTHORITY></AUTHORITY>
 207                             <NAMECOMMENT></NAMECOMMENT>
 208                             <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
 209                             <AUTHDATE>0</AUTHDATE>
 210                           </NODE>
 211                           <NODE EXTINCT="2" ID="16425" CONFIDENCE="0" PHYLESIS="0" LEAF="1" HASPAGE="0" ANCESTORWITHPAGE="16418" ITALICIZENAME="1" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="0">
 212                             <NAME><![CDATA[Homo habilis]]></NAME>
 213                             <DESCRIPTION></DESCRIPTION>
 214                             <AUTHORITY></AUTHORITY>
 215                             <NAMECOMMENT></NAMECOMMENT>
 216                             <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
 217                             <AUTHDATE>0</AUTHDATE>
 218                           </NODE>
 219                         </NODES>
 220                       </NODE>
 221                     </NODES>
 222                   </NODE>
 223                 </NODES>
 224               </NODE>
 225             </NODES>
 226           </NODE>
 227           <NODE EXTINCT="0" ID="16419" CONFIDENCE="0" PHYLESIS="0" LEAF="0" HASPAGE="1" ANCESTORWITHPAGE="16299" ITALICIZENAME="1" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="2">
 228             <NAME><![CDATA[Gorilla]]></NAME>
 229             <DESCRIPTION></DESCRIPTION>
 230             <AUTHORITY></AUTHORITY>
 231             <NAMECOMMENT></NAMECOMMENT>
 232             <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
 233             <AUTHDATE>null</AUTHDATE>
 234             <NODES>
 235               <NODE EXTINCT="0" ID="65355" CONFIDENCE="0" PHYLESIS="0" LEAF="1" HASPAGE="0" ANCESTORWITHPAGE="16419" ITALICIZENAME="1" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="0">
 236                 <NAME><![CDATA[Gorilla beringei]]></NAME>
 237                 <DESCRIPTION></DESCRIPTION>
 238                 <AUTHORITY></AUTHORITY>
 239                 <NAMECOMMENT></NAMECOMMENT>
 240                 <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
 241                 <AUTHDATE>null</AUTHDATE>
 242               </NODE>
 243               <NODE EXTINCT="0" ID="65356" CONFIDENCE="0" PHYLESIS="0" LEAF="1" HASPAGE="0" ANCESTORWITHPAGE="16419" ITALICIZENAME="1" INCOMPLETESUBGROUPS="0" SHOWAUTHORITY="0" SHOWAUTHORITYCONTAINING="0" IS_NEW_COMBINATION="0" COMBINATION_DATE="null" CHILDCOUNT="0">
 244                 <NAME><![CDATA[Gorilla gorilla]]></NAME>
 245                 <DESCRIPTION></DESCRIPTION>
 246                 <AUTHORITY></AUTHORITY>
 247                 <NAMECOMMENT></NAMECOMMENT>
 248                 <COMBINATION_AUTHOR></COMBINATION_AUTHOR>
 249                 <AUTHDATE>null</AUTHDATE>
 250               </NODE>
 251             </NODES>
 252           </NODE>
 253         </NODES>
 254       </NODE>
 255     </NODES>
 256   </NODE>
 257 </TREE>
 258
 259