forester/aptx/aptx_example_files/vis.xml

   1 <?xml version="1.0" encoding="UTF-8"?>
   2 <phyloxml xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.phyloxml.org http://www.phyloxml.org/1.10/phyloxml.xsd" xmlns="http://www.phyloxml.org">
   3 <phylogeny rooted="true" rerootable="false">
   4   <clade>
   5     <clade>
   6       <clade>
   7         <clade>
   8           <clade>
   9             <clade>
  10               <clade>
  11                 <clade>
  12                   <clade>
  13                     <clade>
  14                       <clade>
  15                         <clade>
  16                           <clade>
  17                             <name>NP_001025424.1</name>
  18                             <property ref="aptx_visualization:node_font" datatype="xsd:token" applies_to="node">Serif</property>
  19                             <property ref="aptx_visualization:node_font_size" datatype="xsd:unsignedByte" applies_to="node">18</property>
  20                             <property ref="aptx_visualization:node_font_style" datatype="xsd:token" applies_to="node">bold</property>
  21                           </clade>
  22                           <clade>
  23                             <name>NM_001030253</name>
  24                             <property ref="aptx_visualization:node_font" datatype="xsd:token" applies_to="node">Luxi Mono</property>
  25                             <property ref="aptx_visualization:node_font_size" datatype="xsd:unsignedByte" applies_to="node">18</property>
  26                             <property ref="aptx_visualization:node_font_style" datatype="xsd:token" applies_to="node">bold_italic</property>
  27                           </clade>
  28                         </clade>
  29                         <clade>
  30                           <clade>
  31                             <name>BCL2_HUMAN</name>
  32                             <property ref="aptx_visualization:node_font" datatype="xsd:token" applies_to="node">Courier</property>
  33                             <property ref="aptx_visualization:node_font_size" datatype="xsd:unsignedByte" applies_to="node">16</property>
  34                             <property ref="aptx_visualization:node_font_style" datatype="xsd:token" applies_to="node">bold_italic</property>
  35                           </clade>
  36                           <clade>
  37                             <name>P10415</name>
  38                             <property ref="aptx_visualization:node_font" datatype="xsd:token" applies_to="node">Hershey</property>
  39                             <property ref="aptx_visualization:node_font_size" datatype="xsd:unsignedByte" applies_to="node">24</property>
  40                             <property ref="aptx_visualization:node_font_style" datatype="xsd:token" applies_to="node">bold</property>
  41                           </clade>
  42                         </clade>
  43                       </clade>
  44                       <clade>
  45                         <name>AY695820</name>
  46                         <property ref="aptx_visualization:node_font" datatype="xsd:token" applies_to="node">Bitstream Vera Serif</property>
  47                         <property ref="aptx_visualization:node_font_size" datatype="xsd:unsignedByte" applies_to="node">16</property>
  48                         <property ref="aptx_visualization:node_font_style" datatype="xsd:token" applies_to="node">italic</property>
  49                       </clade>
  50                     </clade>
  51                     <clade>
  52                       <clade>
  53                         <name>K00650</name>
  54                       </clade>
  55                       <clade>
  56                         <name>K00650.1</name>
  57                       </clade>
  58                     </clade>
  59                   </clade>
  60                   <clade>
  61                     <clade>
  62                       <name>AAA59452</name>
  63                     </clade>
  64                     <clade>
  65                       <name>AAA59452.1</name>
  66                     </clade>
  67                   </clade>
  68                 </clade>
  69                 <clade>
  70                   <taxonomy>
  71                     <code>BRAFL</code>
  72                   </taxonomy>
  73                 </clade>
  74               </clade>
  75               <clade>
  76                 <taxonomy>
  77                   <code>STRPU</code>
  78                 </taxonomy>
  79               </clade>
  80             </clade>
  81             <clade>
  82               <clade>
  83                 <clade>
  84                   <taxonomy>
  85                     <code>DROME</code>
  86                   </taxonomy>
  87                 </clade>
  88                 <clade>
  89                   <taxonomy>
  90                     <code>CAEEL</code>
  91                   </taxonomy>
  92                 </clade>
  93               </clade>
  94               <clade>
  95                 <taxonomy>
  96                   <code>LOTGI</code>
  97                 </taxonomy>
  98               </clade>
  99             </clade>
 100           </clade>
 101           <clade>
 102             <clade>
 103               <taxonomy>
 104                 <code>NEMVE</code>
 105               </taxonomy>
 106             </clade>
 107             <clade>
 108               <taxonomy>
 109                 <code>BEROV</code>
 110               </taxonomy>
 111             </clade>
 112           </clade>
 113         </clade>
 114         <clade>
 115           <taxonomy>
 116             <code>TRIAD</code>
 117           </taxonomy>
 118         </clade>
 119       </clade>
 120       <clade>
 121         <taxonomy>
 122           <code>MONBE</code>
 123         </taxonomy>
 124       </clade>
 125     </clade>
 126     <clade>
 127       <taxonomy>
 128         <code>YEAST</code>
 129       </taxonomy>
 130     </clade>
 131   </clade>
 132 </phylogeny>
 133 </phyloxml>