forester/archive/RIO/others/hmmer/squid/Formats/a2m

   1 >GLB2_MORMR
   2 ...PIVD..SGSVSPLSDAEKNKIRAAW.DIVYKNYEKNGVDILVKFFTGTPAAQAFFPK
   3 FKGLTTADALKKSSDVRWHAERIINAVNDAVKSMDDTEKMSMKLQELSVKHAQSFYVDRQ
   4 YFKVLAGII.........ADTTAPGDAGFEKLMSMICILLSSAY.......
   5 >GLBZ_CHITH
   6 MKFIILALCVAAASALSGDQIGLVQST.YGKVKG....DSVGILYAVFKADPTIQAAFPQ
   7 FVGK.DLDAIKGGAEFSTHAGRIVGFLGGVIDDLP...NIGKHVDALVATH.KPRGVTHA
   8 QFNNFRAAFIAYLKGHV..DYTAAVEAAWGATFDAFFGAVFAK.......M
   9 >HBA2_BOSMU
  10 ...V...........LSAADKGNVKAAW.GKVGGHAAEYGAEALERMFLSFPTTKTYFPH
  11 FD.LSH.....GSAQVKGHGAKVAAALTKAVGHLDD...LPGALSELSDLHAHKLRVDPV
  12 NFKLLSHSLLVTLASHLPSDFTPAVHASLDKFLANVSTVLTSKYR......
  13 >HBA2_GALCR
  14 ...V...........LSPTDKSNVKAAW.EKVGAHAGDYGAEALERMFLSFPTTKTYFPH
  15 FD.LSH.....GSTQVKGHGKKVADALTNAVLHVDD...MPSALSALSDLHAHKLRVDPV
  16 NFKLLRHCLLVTLACHHPAEFTPAVHASLDKFMASVSTVLTSKYR......
  17 >HBA4_SALIR
  18 ...S...........LSAKDKANVKAIW.GKILPKSDEIGEQALSRMLVVYPQTKAYFSH
  19 WASVAP.....GSAPVKKHGITIMNQIDDCVGHMDD...LFGFLTKLSELHATKLRVDPT
  20 NFKILAHNLIVVIAAYFPAEFTPEIHLSVDKFLQQLALALAEKYR......
  21 >HBAD_CHLME
  22 ...M...........LTADDKKLLTQLW.EKVAGHQEEFGSEALQRMFLTYPQTKTYFPH
  23 FD.LHP.....GSEQVRGHGKKVAAALGNAVKSLDN...LSQALSELSNLHAYNLRVDPA
  24 NFKLLAQCFQVVLATHLGKDYSPEMHAAFDKFLSAVAAVLAEKYR......
  25 >HBAD_PASMO
  26 ...M...........LTAEDKKLIQQIW.GKLGGAEEEIGADALWRMFHSYPSTKTYFPH
  27 FD.LSQ.....GSDQIRGHGKKVVAALSNAIKNLDN...LSQALSELSNLHAYNLRVDPV
  28 NFKFLSQCLQVSLATRLGKEYSPEVHSAVDKFMSAVASVLAEKYR......
  29 >HBAZ_HORSE
  30 ...S...........LTKAERTMVVSIW.GKISMQADAVGTEALQRLFSSYPQTKTYFPH
  31 FD.LHE.....GSPQLRAHGSKVAAAVGDAVKSIDN...VAGALAKLSELHAYILRVDPV
  32 NFKFLSHCLLVTLASRLPADFTADAHAAWDKFLSIVSSVLTEKYR......
  33 >HBA_AILME
  34 ...V...........LSPADKTNVKATW.DKIGGHAGEYGGEALERTFASFPTTKTYFPH
  35 FD.LSP.....GSAQVKAHGKKVADALTTAVGHLDD...LPGALSALSDLHAHKLRVDPV
  36 NFKLLSHCLLVTLASHHPAEFTPAVHASLDKFFSAVSTVLTSKYR......
  37 >HBA_ANSSE
  38 ...V...........LSAADKGNVKTVF.GKIGGHAEEYGAETLQRMFQTFPQTKTYFPH
  39 FD.LQP.....GSAQIKAHGKKVAAALVEAANHIDD...IAGALSKLSDLHAQKLRVDPV
  40 NFKFLGHCFLVVLAIHHPSLLTPEVHASMDKFLCAVATVLTAKYR......
  41 >HBA_COLLI
  42 ...V...........LSANDKSNVKAVF.AKIGGQAGDLGGEALERLFITYPQTKTYFPH
  43 FD.LSH.....GSAQIKGHGKKVAEALVEAANHIDD...IAGALSKLSDLHAQKLRVDPV
  44 NFKLLGHCFLVVVAVHFPSLLTPEVHASLDKFVLAVGTVLTAKYR......
  45 >HBA_ERIEU
  46 ...V...........LSATDKANVKTFW.GKLGGHGGEYGGEALDRMFQAHPTTKTYFPH
  47 FD.LNP.....GSAQVKGHGKKVADALTTAVNNLDD...VPGALSALSDLHAHKLRVDPV
  48 NFKLLSHCLLVTLALHHPADFTPAVHASLDKFLATVATVLTSKYR......
  49 >HBA_FRAPO
  50 ...V...........LSAADKNNVKGIF.GKISSHAEDYGAEALERMFITYPSTKTYFPH
  51 FD.LSH.....GSAQVKGHGKKVVAALIEAANHIDD...IAGTLSKLSDLHAHKLRVDPV
  52 NFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGNVLTAKYR......
  53 >HBA_MACFA
  54 ...V...........LSPADKTNVKAAW.GKVGGHAGEYGAEALERMFLSFPTTKTYFPH
  55 FD.LSH.....GSAQVKGHGKKVADALTLAVGHVDD...MPQALSALSDLHAHKLRVDPV
  56 NFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR......
  57 >HBA_MACSI
  58 ...V...........LSPADKTNVKDAW.GKVGGHAGEYGAEALERMFLSFPTTKTYFPH
  59 FD.LSH.....GSAQVKGHGKKVADALTLAVGHVDD...MPQALSALSDLHAHKLRVDPV
  60 NFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR......
  61 >HBA_MESAU
  62 ...V...........LSAKDKTNISEAW.GKIGGHAGEYGAEALERMFFVYPTTKTYFPH
  63 FD.VSH.....GSAQVKGHGKKVADALTNAVGHLDD...LPGALSALSDLHAHKLRVDPV
  64 NFKLLSHCLLVTLANHHPADFTPAVHASLDKFFASVSTVLTSKYR......
  65 >HBA_PAGLA
  66 ...V...........LSSADKNNIKATW.DKIGSHAGEYGAEALERTFISFPTTKTYFPH
  67 FD.LSH.....GSAQVKAHGKKVADALTLAVGHLED...LPNALSALSDLHAYKLRVDPV
  68 NFKLLSHCLLVTLACHHPAEFTPAVHSALDKFFSAVSTVLTSKYR......
  69 >HBA_PHACO
  70 ...V...........LSAADKNNVKGIF.TKIAGHAEEYGAEALERMFITYPSTKTYFPH
  71 FD.LSH.....GSAQIKGHGKKVVAALIEAVNHIDD...ITGTLSKLSDLHAHKLRVDPV
  72 NFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGTVLTAKYR......
  73 >HBA_PONPY
  74 ...V...........LSPADKTNVKTAW.GKVGAHAGDYGAEALERMFLSFPTTKTYFPH
  75 FD.LSH.....GSAQVKDHGKKVADALTNAVAHVDD...MPNALSALSDLHAHKLRVDPV
  76 NFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR......
  77 >HBA_PROLO
  78 ...V...........LSPADKANIKATW.DKIGGHAGEYGGEALERTFASFPTTKTYFPH
  79 FD.LSP.....GSAQVKAHGKKVADALTLAVGHLDD...LPGALSALSDLHAYKLRVDPV
  80 NFKLLSHCLLVTLACHHPAEFTPAVHASLDKFFTSVSTVLTSKYR......
  81 >HBA_TRIOC
  82 ...V...........LSANDKTNVKTVF.TKITGHAEDYGAETLERMFITYPPTKTYFPH
  83 FD.LHH.....GSAQIKAHGKKVVGALIEAVNHIDD...IAGALSKLSDLHAQKLRVDPV
  84 NFKLLGQCFLVVVAIHHPSVLTPEVHASLDKFLCAVGNVLSAKYR......
  85 >HBB1_VAREX
  86 ...V..........HWTAEEKQLICSLW.GKI..DVGLIGGETLAGLLVIYPWTQRQFSH
  87 FGNLSSPTAIAGNPRVKAHGKKVLTSFGDAIKNLDN...IKDTFAKLSELHCDKLHVDPT
  88 NFKLLGNVLVIVLADHHGKEFTPAHHAAYQKLVNVVSHSLARRYH......
  89 >HBB2_TRICR
  90 ...V..........HLTAEDRKEIAAIL.GKV..NVDSLGGQCLARLIVVNPWSRRYFHD
  91 FGDLSSCDAICRNPKVLAHGAKVMRSIVEATKHLDN...LREYYADLSVTHSLKFYVDPE
  92 NFKLFSGIVIVCLALTLQTDFSCHKQLAFEKLMKGVSHALGHGY.......
  93 >HBB2_XENTR
  94 ...V..........HWTAEEKATIASVW.GKV..DIEQDGHDALSRLLVVYPWTQRYFSS
  95 FGNLSNVSAVSGNVKVKAHGNKVLSAVGSAIQHLDD...VKSHLKGLSKSHAEDLHVDPE
  96 NFKRLADVLVIVLAAKLGSAFTPQVQAVWEKLNATLVAALSHGYF......
  97 >HBBL_RANCA
  98 ...V..........HWTAEEKAVINSVW.QKV..DVEQDGHEALTRLFIVYPWTQRYFST
  99 FGDLSSPAAIAGNPKVHAHGKKILGAIDNAIHNLDD...VKGTLHDLSEEHANELHVDPE
 100 NFRRLGEVLIVVLGAKLGKAFSPQVQHVWEKFIAVLVDALSHSYH......
 101 >HBB_CALAR
 102 ...V..........HLTGEEKSAVTALW.GKV..NVDEVGGEALGRLLVVYPWTQRFFES
 103 FGDLSTPDAVMNNPKVKAHGKKVLGAFSDGLTHLDN...LKGTFAHLSELHCDKLHVDPE
 104 NFRLLGNVLVCVLAHHFGKEFTPVVQAAYQKVVAGVANALAHKYH......
 105 >HBB_COLLI
 106 ...V..........HWSAEEKQLITSIW.GKV..NVADCGAEALARLLIVYPWTQRFFSS
 107 FGNLSSATAISGNPNVKAHGKKVLTSFGDAVKNLDN...IKGTFAQLSELHCDKLHVDPE
 108 NFRLLGDILVIILAAHFGKDFTPECQAAWQKLVRVVAHALARKYH......
 109 >HBB_EQUHE
 110 ...V..........QLSGEEKAAVLALW.DKV..NEEEVGGEALGRLLVVYPWTQRFFDS
 111 FGDLSNPAAVMGNPKVKAHGKKVLHSFGEGVHHLDN...LKGTFAQLSELHCDKLHVDPE
 112 NFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH......
 113 >HBB_LARRI
 114 ...V..........HWSAEEKQLITGLW.GKV..NVADCGAEALARLLIVYPWTQRFFAS
 115 FGNLSSPTAINGNPMVRAHGKKVLTSFGEAVKNLDN...IKNTFAQLSELHCDKLHVDPE
 116 NFRLLGDILIIVLAAHFAKDFTPDSQAAWQKLVRVVAHALARKYH......
 117 >HBB_MANSP
 118 ...V..........HLTPEEKTAVTTLW.GKV..NVDEVGGEALGRLLVVYPWTQRFFDS
 119 FGDLSSPDAVMGNPKVKAHGKKVLGAFSDGLNHLDN...LKGTFAQLSELHCDKLHVDPE
 120 NFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKYH......
 121 >HBB_ORNAN
 122 ...V..........HLSGGEKSAVTNLW.GKV..NINELGGEALGRLLVVYPWTQRFFEA
 123 FGDLSSAGAVMGNPKVKAHGAKVLTSFGDALKNLDD...LKGTFAKLSELHCDKLHVDPE
 124 NFNRLGNVLIVVLARHFSKDFSPEVQAAWQKLVSGVAHALGHKYH......
 125 >HBB_RABIT
 126 ...V..........HLSSEEKSAVTALW.GKV..NVEEVGGEALGRLLVVYPWTQRFFES
 127 FGDLSSANAVMNNPKVKAHGKKVLAAFSEGLSHLDN...LKGTFAKLSELHCDKLHVDPE
 128 NFRLLGNVLVIVLSHHFGKEFTPQVQAAYQKVVAGVANALAHKYH......
 129 >HBB_SPECI
 130 ...V..........HLSDGEKNAISTAW.GKV..HAAEVGAEALGRLLVVYPWTQRFFDS
 131 FGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDN...LKGTFASLSELHCDKLHVDPE
 132 NFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALAHKYH......
 133 >HBB_SPETO
 134 ...V..........HLTDGEKNAISTAW.GKV..NAAEIGAEALGRLLVVYPWTQRFFDS
 135 FGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDN...LKGTFASLSELHCDKLHVDPE
 136 NFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALSHKYH......
 137 >HBB_SUNMU
 138 ...V..........HLSGEEKACVTGLW.GKV..NEDEVGAEALGRLLVVYPWTQRFFDS
 139 FGDLSSASAVMGNPKVKAHGKKVLHSLGEGVANLDN...LKGTFAKLSELHCDKLHVDPE
 140 NFRLLGNVLVVVLASKFGKEFTPPVQAAFQKVVAGVANALAHKYH......
 141 >HBB_TACAC
 142 ...V..........HLSGSEKTAVTNLW.GHV..NVNELGGEALGRLLVVYPWTQRFFES
 143 FGDLSSADAVMGNAKVKAHGAKVLTSFGDALKNLDN...LKGTFAKLSELHCDKLHVDPE
 144 NFNRLGNVLVVVLARHFSKEFTPEAQAAWQKLVSGVSHALAHKYH......
 145 >HBB_TRIIN
 146 ...V..........HLTPEEKALVIGLW.AKV..NVKEYGGEALGRLLVVYPWTQRFFEH
 147 FGDLSSASAIMNNPKVKAHGEKVFTSFGDGLKHLED...LKGAFAELSELHCDKLHVDPE
 148 NFRLLGNVLVCVLARHFGKEFSPEAQAAYQKVVAGVANALAHKYH......
 149 >HBB_TUPGL
 150 ...V..........HLSGEEKAAVTGLW.GKV..DLEKVGGQSLGSLLIVYPWTQRFFDS
 151 FGDLSSPSAVMSNPKVKAHGKKVLTSFSDGLNHLDN...LKGTFAKLSELHCDKLHVDPE
 152 NFRLLGNVLVRVLACNFGPEFTPQVQAAFQKVVAGVANALAHKYH......
 153 >HBB_URSMA
 154 ...V..........HLTGEEKSLVTGLW.GKV..NVDEVGGEALGRLLVVYPWTQRFFDS
 155 FGDLSSADAIMNNPKVKAHGKKVLNSFSDGLKNLDN...LKGTFAKLSELHCDKLHVDPE
 156 NFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKYH......
 157 >HBE_PONPY
 158 ...V..........HFTAEEKAAVTSLW.SKM..NVEEAGGEALGRLLVVYPWTQRFFDS
 159 FGNLSSPSAILGNPKVKAHGKKVLTSFGDAIKNMDN...LKTTFAKLSELHCDKLHVDPE
 160 NFKLLGNVMVIILATHFGKEFTPEVQAAWQKLVSAVAIALAHKYH......
 161 >HBF1_URECA
 162 ..............GLTTAQIKAIQDHWFLNIKGCLQAAADSIFFKYLTAYPGDLAFFHK
 163 FSSV.PLYGLRSNPAYKAQTLTVINYLDKVVDALGG..NAGALMKAKVPSH.DAMGITPK
 164 HFGQLLKLVGGVFQEEF..SADPTTVAAWGDAAGVLVAAM..........K
 165 >LGB1_PEA
 166 GFTDKQEALVNSSSE.FKQNLPGYSILFYTIVLEKAP..AAKGL................
 167 FSFLKDTAGVEDSPKLQAHAEQVFGLVRDSAAQLRTKGEVVLGNATLGAIHVQKGVTNP.
 168 HFVVVKEALLQTIKKASGNNWSEELNTAWEVAYDGLATAIKKAMKT....A
 169 >LGB1_VICFA
 170 GFTEKQEALVNSSSQLFKQNPSNYSVLFYTIILQKAP..TAKAM................
 171 FSFLKDSAGVVDSPKLGAHAEKVFGMVRDSAVQLRATGEVVLDGKD.GSIHIQKGVLDP.
 172 HFVVVKEALLKTIKEASGDKWSEELSAAWEVAYDGLATAIK....A....A
 173 >MYG_ESCGI
 174 ...V...........LSDAEWQLVLNIW.AKVEADVAGHGQDILIRLFKGHPETLEKFDK
 175 FKHLKTEAEMKASEDLKKHGNTVLTALGGILKKKGH...HEAELKPLAQSHATKHKIPIK
 176 YLEFISDAIIHVLHSRHPGDFGADAQAAMNKALELFRKDIAAKYKELGFQG
 177 >MYG_HORSE
 178 ...G...........LSDGEWQQVLNVW.GKVEADIAGHGQEVLIRLFTGHPETLEKFDK
 179 FKHLKTEAEMKASEDLKKHGTVVLTALGGILKKKGH...HEAELKPLAQSHATKHKIPIK
 180 YLEFISDAIIHVLHSKHPGNFGADAQGAMTKALELFRNDIAAKYKELGFQG
 181 >MYG_LYCPI
 182 ...G...........LSDGEWQIVLNIW.GKVETDLAGHGQEVLIRLFKNHPETLDKFDK
 183 FKHLKTEDEMKGSEDLKKHGNTVLTALGGILKKKGH...HEAELKPLAQSHATKHKIPVK
 184 YLEFISDAIIQVLQNKHSGDFHADTEAAMKKALELFRNDIAAKYKELGFQG
 185 >MYG_MOUSE
 186 ...G...........LSDGEWQLVLNVW.GKVEADLAGHGQEVLIGLFKTHPETLDKFDK
 187 FKNLKSEEDMKGSEDLKKHGCTVLTALGTILKKKGQ...HAAEIQPLAQSHATKHKIPVK
 188 YLEFISEIIIEVLKKRHSGDFGADAQGAMSKALELFRNDIAAKYKELGFQG
 189 >MYG_MUSAN
 190 ..................VDWEKVNSVW.SAVESDLTAIGQNILLRLFEQYPESQNHFPK
 191 FKN.KSLGELKDTADIKAQADTVLSALGNIVKKKGS...HSQPVKALAATHITTHKIPPH
 192 YFTKITTIAVDVLSEMYPSEMNAQVQAAFSGAFKIICSDIEKEYKAANFQG
 193 >MYG_PROGU
 194 ...G...........LSDGEWQLVLNVW.GKVEGDLSGHGQEVLIRLFKGHPETLEKFDK
 195 FKHLKAEDEMRASEELKKHGTTVLTALGGILKKKGQ...HAAELAPLAQSHATKHKIPVK
 196 YLEFISEAIIQVLQSKHPGDFGADAQGAMSKALELFRNDIAAKYKELGFQG
 197 >MYG_SAISC
 198 ...G...........LSDGEWQLVLNIW.GKVEADIPSHGQEVLISLFKGHPETLEKFDK
 199 FKHLKSEDEMKASEELKKHGTTVLTALGGILKKKGQ...HEAELKPLAQSHATKHKIPVK
 200 YLELISDAIVHVLQKKHPGDFGADAQGAMKKALELFRNDMAAKYKELGFQG