4 #=GF DE 14-3-3 proteins
11 #=GF BM hmmbuild -f HMM SEED
12 #=GF BM hmmcalibrate --seed 0 HMM
15 #=GF RT Structure of a 14-3-3 protein and implications for
16 #=GF RT coordination of multiple signalling pathways.
17 #=GF RA Xiao B, Smerdon SJ, Jones DH, Dodson GG, Soneji Y, Aitken A,
19 #=GF RL Nature 1995;376:188-191.
22 #=GF RT Crystal structure of the zeta isoform of the 14-3-3 protein.
23 #=GF RA Liu D, Bienkowska J, Petosa C, Collier RJ, Fu H, Liddington
25 #=GF RL Nature 1995;376:191-194.
28 #=GF RT Interaction of 14-3-3 with signaling proteins is mediated by
29 #=GF RT the recognition of phosphoserine.
30 #=GF RA Muslin AJ, Tanner JW, Allen PM, Shaw AS;
31 #=GF RL Cell 1996;84:889-897.
34 #=GF RT The 14-3-3 protein binds its target proteins with a common
35 #=GF RT site located towards the C-terminus.
36 #=GF RA Ichimura T, Ito M, Itagaki C, Takahashi M, Horigome T, Omata
37 #=GF RA S, Ohno S, Isobe T
38 #=GF RL FEBS Lett 1997;413:273-276.
41 #=GF RT Molecular evolution of the 14-3-3 protein family.
42 #=GF RA Wang W, Shakes DC
43 #=GF RL J Mol Evol 1996;43:384-398.
46 #=GF RT Function of 14-3-3 proteins.
47 #=GF RA Jin DY, Lyu MS, Kozak CA, Jeang KT
48 #=GF RL Nature 1996;382:308-308.
49 #=GF DR PROSITE; PDOC00633;
50 #=GF DR SMART; 14_3_3;
51 #=GF DR PRINTS; PR00305;
53 1431_ENTHI/4-239 REDCVYTAKLAEQSERYDEMVQCMKQVAEMEA...ELSIEERNLLSVAYKNVIGAKRASWRIISSLEQKEQAKG.NDKHVEIIKGYRAKIEKELSTCCDDVLKVIQENLLPKA..STSESKVFFKKMEGDYYRYFAEFTVDEKRKEVADKSLAAYTEATEISNAELAPTHPIRLGLALNFSVFYFEIMNDADKACQLAKQAFDDAIAKLDEVPENMYKDSTLIMQLLRDNLTLWTSDACDEE
54 #=GS 1431_ENTHI/4-239 AC P42648
55 1432_ENTHI/4-238 REDLVYLSKLAEQSERYEEMVQYMKQVAEMGT...ELSVEERNLISVAYKNVVGSRRASWRIISSLEQKEQAKG.NTQRVELIKTYRAKIEQELSQKCDDVLKIITEFLLKNS..TSIESKVFFKKMEGDYYRYYAEFTVDEKRKEVADKSLAAYQEATDTA.ASLVPTHPIRLGLALNFSVFYYQIMNDADKACQLAKEAFDEAIQKLDEVPEESYKESTLIMQLLRDNLTLWTSDMGDDE
56 #=GS 1432_ENTHI/4-238 AC P42649
57 1433_CAEEL/5-237 VEELVQRAKLAEQAERYDDMAAAMKKVTEQGQ...ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEG...SEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLIVKA..GAAESKAFYLKMKGDYYRYLAEVAS.EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFSVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDVGAED
58 #=GS 1433_CAEEL/5-237 AC P41932
59 1433_LYCES/9-246 REENVYMAKLADRAESDEEMVEFMEKVSNSLGS.EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRG.NEEHVNSIREYRSKIENELSKICDGILKLLDSKLIPSA..TSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIASAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDG
60 #=GS 1433_LYCES/9-246 AC P93209
61 1433_XENLA/1-227 .......AKLSEQAERYDDMAASMKAVTELGA...ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEG...NDKRQQMAREYREKVETELQDICKDVLDLLDRFLVPNA..TPPESKVFYLKMKGDYYRYLSEVASGDSKQETVASSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKSAFDEAIRELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGEE
62 #=GS 1433_XENLA/1-227 AC P29309
63 1434_LYCES/6-243 REENVYLAKLAEQAERYEEMIEFMEKVAKTADV.EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRG.NEDHVNTIKEYRSKIEADLSKICDGILSLLESNLIPSA..STAESKVFHLKMKGDYHRYLAEFKTGTERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDNADDV
64 #=GS 1434_LYCES/6-243 AC P42652
65 143B_VICFA/7-242 RENFVYIAKLAEQAERYEEMVDSMKNVANLDV...ELTIEERNLLSVGYKNVIGARRASWRILSSIEQKEESKG.NDVNAKRIKEYRHKVETELSNICIDVMRVIDEHLIPSA..AAGESTVFYYKMKGDYYRYLAEFKTGNEKKEAGDQSMKAYESATTAAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDG
66 #=GS 143B_VICFA/7-242 AC P42654
67 143E_HUMAN/4-239 REDLVYQAKLAEQAERYDEMVESMKKVAGMDV...ELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKG.GEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAA..NTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDG
68 #=GS 143E_HUMAN/4-239 AC P42655
69 143F_MOUSE/3-240 REQLLQRARLAEQAERYDDMASAMKAVTELNE...PLSNEDRNLLSVAYKNVVGARRSSWRVISSIEQKTMADG.NEKKLEKVKAYREKIEKELETVCNDVLALLDKFLIKNCNDFQYESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEE
70 #=GS 143F_MOUSE/3-240 AC P11576
71 143R_ARATH/7-245 RDQYVYMAKLAEQAERYEEMVQFMEQLVTGATPAEELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRK.NDEHVSLVKDYRSKVESELSSVCSGILKLLDSHLIPSA..GASESKVFYLKMKGDYHRYMAEFKSGDERKTAAEDTMLAYKAAQDIAAADMAPTHPIRLGLALNFSVFYYEILNSSDKACNMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDYAGAD
72 #=GS 143R_ARATH/7-245 AC P42647
73 143S_HUMAN/3-238 RASLIQKAKLAEQAERYEDMAAFMKGAVEKGE...ELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEG.SEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEA..GDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEE
74 #=GS 143S_HUMAN/3-238 AC P31947
75 143T_HUMAN/3-236 KTELIQKAKLAEQAERYDDMATCMKAVTEQGA...ELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDT...SDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANA..TNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEE
76 #=GS 143T_HUMAN/3-236 AC P27348
77 143Z_DROME/6-239 KEELVQKAKLAEQSERYDDMAQAMKSVTETGV...ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEA...SARKQQLAREYRERVEKELREICYEVLGLLDKYLIPKA..SNPESKVFYLKMKGDYYRYLAEVATGDARNTVVDDSQTAYQDAFDISKGKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDE
78 #=GS 143Z_DROME/6-239 AC P29310
79 BMH1_YEAST/4-240 REDSVYLAKLAEQAERYEEMVENMKTVASSGQ...ELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKEKSEHQVELICSYRSKIETELTKISDDILSVLDSHLIPSA..TTGESKVFYYKMKGDYHRYLAEFSSGDAREKATNASLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMSESG
80 #=GS BMH1_YEAST/4-240 AC P29311
81 RA24_SCHPO/6-241 REDAVYLAKLAEQAERYEGMVENMKSVASTDQ...ELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKG.NTAQVELIKEYRQKIEQELDTICQDILTVLEKHLIPNA..ASAESKVFYYKMKGDYYRYLAEFAVGEKRQHSADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACYLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDAEYSA
82 #=GS RA24_SCHPO/6-241 AC P42656
83 RA25_SCHPO/5-240 RENSVYLAKLAEQAERYEEMVENMKKVACSND...KLSVEERNLLSVAYKNIIGARRASWRIISSIEQKEESRG.NTRQAALIKEYRKKIEDELSDICHDVLSVLEKHLIPAA..TTGESKVFYYKMKGDYYRYLAEFTVGEVCKEAADSSLEAYKAASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPESACHLAKQVFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDAEYNQ
84 #=GS RA25_SCHPO/5-240 AC P42657
89 #=GF DE RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
94 ARP2_PLAFA/364-438 VEVTYLF....STYLVNGQTL..IYS.....N.ISVV....LVILY....
95 CABA_MOUSE/77-147 MFVGGL......SWDTSKKDLKDYFT.....K.FGEV..VDCTIKMD...
96 GR10_BRANA/8-79 CFVGGL......AWATGDAELERTFS.....Q.FGEV..IDSKIIND...
97 NSR1_YEAST/170-241 IFVGRL......SWSIDDEWLKKEFE.....H.IGGV..IGARVIYE...
98 RT19_ARATH/33-104 LYIGGL......SPGTDEHSLKDAFS.....S.FNGV..TEARVMTN...
99 RO28_NICSY/99-170 LFVGNL......PYDIDSEGLAQLFQ.....Q.AGVV..EIAEVIYN...
100 RO33_NICSY/116-187 LYVGNL......PFSMTSSQLSEIFA.....E.AGTV..ANVEIVYD...
101 RO33_NICSY/219-290 LYVANL......SWALTSQGLRDAFA.....D.QPGF..MSAKVIYD...
102 GBP2_YEAST/221-291 VFIINL......PYSMNWQSLKDMFK.....E.CGHV..LRADVELD...
103 HUD_HUMAN/48-119 LIVNYL......PQNMTQEEFRSLFG.....S.IGEI..ESCKLVRD...
104 SXLF_DROME/127-198 LIVNYL......PQDMTDRELYALFR.....A.IGPI..NTCRIMRD...
105 PABP_DROME/4-75 LYVGDL......PQDVNESGLFDKFS.....S.AGPV..LSIRVCRD...
106 NAM8_YEAST/165-237 IFVGDL......APNVTESQLFELFI.....NRYAST..SHAKIVHD...
107 PUB1_YEAST/163-234 LFVGDL......NVNVDDETLRNAFK.....D.FPSY..LSGHVMWD...
108 TIA1_HUMAN/108-179 VFVGDL......SPQITTEDIKAAFA.....P.FGRI..SDARVVKD...
109 PES4_YEAST/93-164 LFIGDL......HETVTEETLKGIFK.....K.YPSF..VSAKVCLD...
110 NOP4_YEAST/28-98 LFVRSI......PQDVTDEQLADFFS.....N.FAPI..KHAVVVKD...
111 CST2_HUMAN/18-89 VFVGNI......PYEATEEQLKDIFS.....E.VGPV..VSFRLVYD...
112 RN15_YEAST/20-91 VYLGSI......PYDQTEEQILDLCS.....N.VGPV..INLKMMFD...
113 YIS1_YEAST/66-136 IFVGNI......TPDVTPEQIEDHFK.....D.CGQI..KRITLLYD...
114 IF4B_HUMAN/98-168 AFLGNL......PYDVTEESIKEFFR.....G.LNIS...AVRLPR....
115 NSR1_YEAST/269-340 LFLGNL......SFNADRDAIFELFA.....K.HGEV..VSVRIPTH...
116 GBP2_YEAST/124-193 IFVRNL......TFDCTPEDLKELFG.....T.VGEV..VEADIIT....
117 NOP3_YEAST/127-190 LFVRPF......PLDVQESELNEIFG.....P.FGPM..KEVKILN....
118 U2AF_HUMAN/261-332 LFIGGL......PNYLNDDQVKELLT.....S.FGPL..KAFNLVKD...
119 U2AF_SCHPO/312-383 IYISNL......PLNLGEDQVVELLK.....P.FGDL..LSFQLIKN...
120 ELAV_DROME/250-322 LYVSGL......PKTMTQQELEAIFA.....P.FGAI..ITSRILQN...
121 SXLF_DROME/213-285 LYVTNL......PRTITDDQLDTIFG.....K.YGSI..VQKNILRD...
122 ELAV_DROME/404-475 IFIYNL......APETEEAALWQLFG.....P.FGAV..QSVKIVKD...
123 MSSP_HUMAN/31-102 LYIRGL......PPHTTDQDLVKLCQ.....P.YGKI..VSTKAILD...
124 NONA_DROME/304-369 LYVGNL......TNDITDDELREMFK.....P.YGEI..SEIFSNLD...
125 PABP_DROME/92-162 VFIKNL......DRAIDNKAIYDTFS.....A.FGNI..LSCKVATD...
126 PABP_DROME/183-254 VYVKNF......TEDFDDEKLKEFFE.....P.YGKI..TSYKVMS....
127 PABP_SCHPO/263-333 VYIKNL......DTEITEQEFSDLFG.....Q.FGEI..TSLSLVKD...
128 PUB1_YEAST/342-407 AYIGNI......PHFATEADLIPLFQ.....N.FGFI..LDFKHYPE...
129 PUB1_YEAST/76-146 LYVGNL......DKAITEDILKQYFQ.....V.GGPI..ANIKIMID...
130 TIA1_HUMAN/9-78 LYVGNL......SRDVTEALILQLFS.....Q.IGPC..KNCKMIMD...
131 TIA1_HUMAN/216-281 VYCGGV......TSGLTEQLMRQTFS.....P.FGQI..MEIRVFPD...
132 EWS_HUMAN/363-442 IYVQGL......NDSVTLDDLADFFK.....Q.CGVV..K.MNKRTG...
133 PTB_HUMAN/186-253 IIVENL......FYPVTLDVLHQIFS.....K.FGTV....LKIIT....
134 ROC_HUMAN/18-82 VFIGNL.....NTLVVKKSDVEAIFS.....K.YGKI..VGCSVHK....
135 YIS5_YEAST/33-104 IYIGNL......NRELTEGDILTVFS.....E.YGVP..VDVILSRD...
136 RU1A_HUMAN/12-84 IYINNLNE..KIKKDELKKSLYAIFS.....Q.FGQI..LDILVSR....
137 RU2B_HUMAN/9-81 IYINNMND..KIKKEELKRSLYALFS.....Q.FGHV..VDIVALK....
138 CABA_MOUSE/161-231 IFVGGL......NPEATEEKIREYFG.....Q.FGEI..EAIELPID...
139 ROA1_BOVIN/106-176 IFVGGI......KEDTEEHHLRDYFE.....Q.YGKI..EVIEIMTD...
140 SQD_DROME/138-208 IFVGGL......TTEISDEEIKTYFG.....Q.FGNI..VEVEMPLD...
141 RB97_DROME/34-104 LFIGGL......APYTTEENLKLFYG.....Q.WGKV..VDVVVMRD...
142 SQD_DROME/58-128 LFVGGL......SWETTEKELRDHFG.....K.YGEI..ESINVKTD...
143 ROG_HUMAN/10-81 LFIGGL......NTETNEKALEAVFG.....K.YGRI..VEVLLMKD...
144 SFR2_CHICK/16-87 LKVDNL......TYRTSPDTLRRVFE.....K.YGRV..GDVYIPRD...
145 SFR1_HUMAN/17-85 IYVGNL......PPDIRTKDIEDVFY.....K.YGAI..RDIDLKNR...
146 SR55_DROME/5-68 VYVGGL......PYGVRERDLERFFK.....G.YGRT..RDILIKN....
147 SFR3_HUMAN/12-78 VYVGNL......GNNGNKTELERAFG.....Y.YGPL..RSVWVARN...
148 TRA2_DROME/99-170 IGVFGL......NTNTSQHKVRELFN.....K.YGPI..ERIQMVID...
149 RU17_DROME/104-175 LFIARI......NYDTSESKLRREFE.....F.YGPI..KKIVLIHD...
150 GBP2_YEAST/351-421 IYCSNL......PFSTARSDLFDLFG.....P.IGKI..NNAELKP....
151 RNP1_YEAST/37-109 LYVGNL......PKNCRKQDLRDLFE.....PNYGKI..TINMLKKK...
152 PES4_YEAST/305-374 IFIKNL......PTITTRDDILNFFS.....E.VGPI..KSIYLSN....
153 YHH5_YEAST/315-384 ILVKNL......PSDTTQEEVLDYFS.....T.IGPI..KSVFISEK...
154 YHC4_YEAST/348-415 IFVGQL......DKETTREELNRRFS.....T.HGKI..QDINLIFK...
155 IF39_YEAST/79-157 IVVNGAPVIPSAKVPVLKKALTSLFS.....K.AGKV..VNMEFPID...
156 MEI2_SCHPO/197-265 LFVTNL......PRIVPYATLLELFS.....K.LGDV..KGIDTSSL...
157 NOP4_YEAST/292-363 VFVRNV......PYDATEESLAPHFS.....K.FGSV..KYALPVID...
158 MODU_DROME/260-326 VVVGLI......GPNITKDDLKTFFE.....K.VAPV..EAVTISSN...
159 ROF_HUMAN/113-183 VRLRGL......PFGCTKEEIVQFFS.....G.LEIV.PNGITLPVD...
160 MODU_DROME/342-410 LVVENVG....KHESYSSDALEKIFK.....K.FGDV..EEIDVVC....
161 NUCL_CHICK/283-352 LFVKNL......TPTKDYEELRTAIK.....EFFGKK...NLQVSEV...
162 NONA_DROME/378-448 LRVSNL......TPFVSNELLYKSFE.....I.FGPI..ERASITVD...
163 PSF_HUMAN/373-443 LSVRNL......SPYVSNELLEEAFS.....Q.FGPI..ERAVVIVD...
164 NOP3_YEAST/202-270 ITMKNL......PEGCSWQDLKDLAR.....E.NSLE..TTFSSVN....
165 SFR1_HUMAN/122-186 VVVSGL......PPSGSWQDLKDHMR.....E.AGDV..CYADVYRD...
166 CPO_DROME/453-526 LFVSGL......PMDAKPRELYLLFR.....A.YEGY..EGSLLKV....
167 WHI3_YEAST/540-614 LYVGNL......PSDATEQELRQLFS.....G.QEGF..RRLSFRNK...
168 RU1A_HUMAN/210-276 LFLTNL......PEETNELMLSMLFN.....Q.FPGF..KEVRLVPG...
169 RU2B_HUMAN/153-220 LFLNNL......PEETNEMMLSMLFN.....Q.FPGF..KEVRLVPG...
170 RU1A_YEAST/229-293 LLIQNL......PSGTTEQLLSQILG.....N.EALV...EIRLVSV...
171 MODU_DROME/177-246 VFVTNL......PNEYLHKDLVALFA.....K.FGRL..SALQRFTN...
172 PR24_YEAST/43-111 VLVKNL......PKSYNQNKVYKYFK.....H.CGPI..IHVDVAD....
173 MODU_DROME/422-484 ILVTNL......TSDATEADLRKVFN.....D.SGEI..ESIIMLG....
174 PR24_YEAST/212-284 IMIRNL.....STELLDENLLRESFE.....G.FGSI..EKINIPAG...
175 SSB1_YEAST/39-114 IFIGNV......AHECTEDDLKQLFV.....EEFGDE..VSVEIPIK...
176 PTB_HUMAN/61-128 IHIRKL......PIDVTEGEVISLGL.....P.FGKV..TNLLMLKG...
177 RN12_YEAST/200-267 IVIKFQ......GPALTEEEIYSLFR.....R.YGTI....IDIFP....
178 D111_ARATH/281-360 LLLRNMVG.PGQVDDELEDEVGGECA.....K.YGTV..TRVLIFE....
179 U2AG_HUMAN/67-142 CAVSDVEM..QEHYDEFFEEVFTEME.....EKYGEV..EEMNVCDN...
180 IF39_SCHPO/41-124 VVIEGAP....VVEEAKQQDFFRFLSSKVLAK.IGKVKENGFYMPFE...
181 LA_DROME/151-225 AYAKGF......PLDSQISELLDFTA.....N.YDKV..VNLTMRNS...
182 LA_HUMAN/113-182 VYIKGF......PTDATLDDIKEWLE.....D.KGQV..LNIQMRR....
183 PR24_YEAST/119-190 LWMTNF......PPSYTQRNIRDLLQ.....D.INVV.ALSIRLPSL...
185 ARP2_PLAFA/364-438 ....HQKFKETVLGRNSGFGFVSYDNVISAQHAIQFMNG.Y...FVNNKY
186 CABA_MOUSE/77-147 ..........PNTGRSRGFGFILFKDSSSVEKVLD.QKE.H...RLDGRV
187 GR10_BRANA/8-79 ..........RETGRSRGFGFVTFKDEKSMKDAIDEMNG.K...ELDGRT
188 NSR1_YEAST/170-241 ..........RGTDRSRGYGYVDFENKSYAEKAIQEMQG.K...EIDGRP
189 RT19_ARATH/33-104 ..........KVTGRSRGYGFVNFISEDSANSAISAMNG.Q...ELNGFN
190 RO28_NICSY/99-170 ..........RETDRSRGFGFVTMSTVEEADKAVELYSQ.Y...DLNGRL
191 RO33_NICSY/116-187 ..........RVTDRSRGFAFVTMGSVEEAKEAIRLFDG.S...QVGGRT
192 RO33_NICSY/219-290 ..........RSSGRSRGFGFITFSSAEAMNSALDTMNE.V...ELEGRP
193 GBP2_YEAST/221-291 ...........FNGFSRGFGSVIYPTEDEMIRAIDTFNG.M...EVEGRV
194 HUD_HUMAN/48-119 ..........KITGQSLGYGFVNYIDPKDAEKAINTLNG.L...RLQTKT
195 SXLF_DROME/127-198 ..........YKTGYSFGYAFVDFTSEMDSQRAIKVLNG.I...TVRNKR
196 PABP_DROME/4-75 ..........VITRRSLGYAYVNFQQPADAERALDTMNF.D...LVRNKP
197 NAM8_YEAST/165-237 ..........QVTGMSKGYGFVKFTNSDEQQLALSEMQG.V...FLNGRA
198 PUB1_YEAST/163-234 ..........MQTGSSRGYGFVSFTSQDDAQNAMDSMQG.Q...DLNGRP
199 TIA1_HUMAN/108-179 ..........MATGKSKGYGFVSFFNKWDAENAIQQMGG.Q...WLGGRQ
200 PES4_YEAST/93-164 ..........SVTKKSLGHGYLNFEDKEEAEKAMEELNY.T...KVNGKE
201 NOP4_YEAST/28-98 ...........TNKRSRGFGFVSFAVEDDTKEALAKARK.T...KFNGHI
202 CST2_HUMAN/18-89 ..........RETGKPKGYGFCEYQDQETALSAMRNLNG.R...EFSGRA
203 RN15_YEAST/20-91 ..........PQTGRSKGYAFIEFRDLESSASAVRNLNG.Y...QLGSRF
204 YIS1_YEAST/66-136 ..........RNTGTPKGYGYIEFESPAYREKALQ.LNG.G...ELKGKK
205 IF4B_HUMAN/98-168 ........EPSNPERLKGFGYAEFEDLDSLLSALS.LNE.E...SLGNRR
206 NSR1_YEAST/269-340 ..........PETEQPKGFGYVQFSNMEDAKKALDALQG.E...YIDNRP
207 GBP2_YEAST/124-193 ...........SKGHHRGMGTVEFTKNESVQDAISKFDG.A...LFMDRK
208 NOP3_YEAST/127-190 .................GFAFVEFEEAESAAKAIEEVHG.K...SFANQP
209 U2AF_HUMAN/261-332 ..........SATGLSKGYAFCEYVDINVTDQAIAGLNG.M...QLGDKK
210 U2AF_SCHPO/312-383 ..........IADGSSKGFCFCEFKNPSDAEVAISGLDG.K...DTYGNK
211 ELAV_DROME/250-322 .........AGNDTQTKGVGFIRFDKREEATRAIIALNG.T...TPSSCT
212 SXLF_DROME/213-285 ..........KLTGRPRGVAFVRYNKREEAQEAISALNNVI...PEGGSQ
213 ELAV_DROME/404-475 ..........PTTNQCKGYGFVSMTNYDEAAMAIRALNG.Y...TMGNRV
214 MSSP_HUMAN/31-102 ..........KTTNKCKGYGFVDFDSPAAAQKAVSALKA.S...GVQAQK
215 NONA_DROME/304-369 ................KNFTFLKVDYHPNAEKAKRALDG.S...MRKGRQ
216 PABP_DROME/92-162 ...........EKGNSKGYGFVHFETEEAANTSIDKVNG.M...LLNGKK
217 PABP_DROME/183-254 ..........KEDGKSKGFGFVAFETTEAAEAAVQALNGKD...MGEGKS
218 PABP_SCHPO/263-333 ...........QNDKPRGFGFVNYANHECAQKAVDELND.K...EYKGKK
219 PUB1_YEAST/342-407 ................KGCCFIKYDTHEQAAVCIVALAN.F...PFQGRN
220 PUB1_YEAST/76-146 ...........KNNKNVNYAFVEYHQSHDANIALQTLNG.K...QIENNI
221 TIA1_HUMAN/9-78 ............TAGNDPYCFVEFHEHRHAAAALAAMNG.R...KIMGKE
222 TIA1_HUMAN/216-281 ................KGYSFVRFNSHESAAHAIVSVNG.T...TIEGHV
223 EWS_HUMAN/363-442 .QPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDG.K...DFQGSK
224 PTB_HUMAN/186-253 ...........FTKNNQFQALLQYADPVSAQHAKLSLDG.Q...NIYNAC
225 ROC_HUMAN/18-82 .................GFAFVQYVNERNARAAVAGEDG.R...MIAGQV
226 YIS5_YEAST/33-104 ..........ENTGESQGFAYLKYEDQRSTILAVDNLNG.F...KIGGRA
227 RU1A_HUMAN/12-84 ............SLKMRGQAFVIFKEVSSATNALRSMQG.F...PFYDKP
228 RU2B_HUMAN/9-81 ............TMKMRGQAFVIFKELGSSTNALRQLQG.F...PFYGKP
229 CABA_MOUSE/161-231 ..........PKLNKRRGFVFITFKEEDPVKKVLE.KKF.H...TVSGSK
230 ROA1_BOVIN/106-176 ..........RGSGKKRGFAFVTFDDHDSVDKIVI.QKY.H...TVNGHN
231 SQD_DROME/138-208 ..........KQKSQRKGFCFITFDSEQVVTDLLK.TPK.Q...KIAGKE
232 RB97_DROME/34-104 ..........AATKRSRGFGFITYTKSLMVDRAQE..NRPH...IIDGKT
233 SQD_DROME/58-128 ..........PQTGRSRGFAFIVFTNTEAIDKVSA.ADE.H...IINSKK
234 ROG_HUMAN/10-81 ..........RETNKSRGFAFVTFESPADAKDAARDMNG.K...SLDGKA
235 SFR2_CHICK/16-87 ..........RYTKESRGFAFVRFHDKRDAEDAMDAMDG.A...VLDGRE
236 SFR1_HUMAN/17-85 .............RGGPPFAFVEFEDPRDAEDAVYGRDG.Y...DYDGYR
237 SR55_DROME/5-68 .................GYGFVEFEDYRDADDAVYELNG.K...ELLGER
238 SFR3_HUMAN/12-78 ...............PPGFAFVEFEDPRDAADAVRELDG.R...TLCGCR
239 TRA2_DROME/99-170 ..........AQTQRSRGFCFIYFEKLSDARAAKDSCSG.I...EVDGRR
240 RU17_DROME/104-175 ..........QESGKPKGYAFIEYEHERDMHAAYKHADG.K...KIDSKR
241 GBP2_YEAST/351-421 ..........QENGQPTGVAVVEYENLVDADFCIQKLNN.Y...NYGGCS
242 RNP1_YEAST/37-109 ..........PLKKPLKRFAFIEFQEGVNLKKVKEKMNG.K...IFMNEK
243 PES4_YEAST/305-374 ...........ATKVKYLWAFVTYKNSSDSEKAIKRYNN.F...YFRGKK
244 YHH5_YEAST/315-384 ............QANTPHKAFVTYKNEEESKKAQKCLNK.T...IFKNHT
245 YHC4_YEAST/348-415 ..............PTNIFAFIKYETEEAAAAALESENH.A...IFLNKT
246 IF39_YEAST/79-157 ..........EATGKTKGFLFVECGSMNDAKKIIKSFHGKR...LDLKHR
247 MEI2_SCHPO/197-265 ..............STDGICIVAFFDIRQAIQAAKSLRSQR...FFNDRL
248 NOP4_YEAST/292-363 ..........KSTGLAKGTAFVAFKDQYTYNECIKNAPA.A...GSTSLL
249 MODU_DROME/260-326 ..............RLMPRAFVRLASVDDIPKALK.LHS.T...ELFSRF
250 ROF_HUMAN/113-183 ...........PEGKITGEAFVQFASQELAEKALG.KHK.E...RIGHRY
251 MODU_DROME/342-410 ..............SKAVLAFVTFKQSDAATKALAQLDG.K...TVNKFE
252 NUCL_CHICK/283-352 ...........RIGSSKRFGYVDFLSAEDMDKALQ.LNG.K...KLMGLE
253 NONA_DROME/378-448 ...........DRGKHMGEGIVEFAKKSSASACLRMCNE.K...CFFLTA
254 PSF_HUMAN/373-443 ...........DRGRSTGKGIVEFASKPAARKAFERCSE.G...VFLLTT
255 NOP3_YEAST/202-270 ............TRDFDGTGALEFPSEEILVEALERLNN.I...EFRGSV
256 SFR1_HUMAN/122-186 .................GTGVVEFVRKEDMTYAVRKLDN.T...KFRSHE
257 CPO_DROME/453-526 ........TSKNGKTASPVGFVTFHTRAGAEAAKQDLQGVR...FDPDMP
258 WHI3_YEAST/540-614 .......NTTSNGHSHGPMCFVEFDDVSFATRALAELYG.R...QLPRST
259 RU1A_HUMAN/210-276 ...............RHDIAFVEFDNEVQAGAARDALQG.F...KITQNN
260 RU2B_HUMAN/153-220 ...............RHDIAFVEFENDGQAGAARDALQGFK...ITPSHA
261 RU1A_YEAST/229-293 ................RNLAFVEYETVADATKIKNQLGS.T...YKLQNN
262 MODU_DROME/177-246 .............LNGNKSVLIAFDTSTGAEAVLQAKPKAL...TLGDNV
263 PR24_YEAST/43-111 ...........SLKKNFRFARIEFARYDGALAAIT.KTH.K...VVGQNE
264 MODU_DROME/422-484 .................QKAVVKFKDDEGFCKSFL.ANE.S...IVNNAP
265 PR24_YEAST/212-284 .........QKEHSFNNCCAFMVFENKDSAERALQ.MNR.S...LLGNRE
266 SSB1_YEAST/39-114 .......EHTDGHIPASKHALVKFPTKIDFDNIKENYDT.K...VVKDRE
267 PTB_HUMAN/61-128 ................KNQAFIEMNTEEAANTMVN.YYT.SVTPVLRGQP
268 RN12_YEAST/200-267 ...........PTAANNNVAKVRYRSFRGAISAKNCVSG.I...EIHNTV
269 D111_ARATH/281-360 ......ITEPNFPVHEAVRIFVQFSRPEETTKALVDLDG.R...YFGGRT
270 U2AG_HUMAN/67-142 ...........LGDHLVGNVYVKFRREEDAEKAVIDLNN.R...WFNGQP
271 IF39_SCHPO/41-124 ......EKNGK..KMSLGLVFADFENVDGADLCVQELDGKQ...ILKNHT
272 LA_DROME/151-225 ......YDKPTKSYKFKGSIFLTFETKDQAKAFLE.QEK.I...VYKERE
273 LA_HUMAN/113-182 ..........TLHKAFKGSIFVVFDSIESAKKFVE.TPG.Q...KYKETD
274 PR24_YEAST/119-190 ...........RFNTSRRFAYIDVTSKEDARYCVEKLNG.L...KIEGYT
276 ARP2_PLAFA/364-438 LKV
277 CABA_MOUSE/77-147 IDP
279 NSR1_YEAST/170-241 INC
280 RT19_ARATH/33-104 ISV
281 RO28_NICSY/99-170 LTV
282 RO33_NICSY/116-187 VKV
283 RO33_NICSY/219-290 LRL
284 GBP2_YEAST/221-291 LEV
286 SXLF_DROME/127-198 LKV
288 NAM8_YEAST/165-237 IKV
289 PUB1_YEAST/163-234 LRI
290 TIA1_HUMAN/108-179 IRT
291 PES4_YEAST/93-164 IRI
295 YIS1_YEAST/66-136 IAV
296 IF4B_HUMAN/98-168 IRV
297 NSR1_YEAST/269-340 VRL
298 GBP2_YEAST/124-193 LMV
299 NOP3_YEAST/127-190 LEV
300 U2AF_HUMAN/261-332 LLV
301 U2AF_SCHPO/312-383 LHA
302 ELAV_DROME/250-322 DPI
303 SXLF_DROME/213-285 PLS
304 ELAV_DROME/404-475 LQV
305 MSSP_HUMAN/31-102 AKQ
306 NONA_DROME/304-369 LRV
307 PABP_DROME/92-162 VYV
308 PABP_DROME/183-254 LYV
309 PABP_SCHPO/263-333 LYV
310 PUB1_YEAST/342-407 LRT
311 PUB1_YEAST/76-146 VKI
313 TIA1_HUMAN/216-281 VKC
314 EWS_HUMAN/363-442 LKV
315 PTB_HUMAN/186-253 CTL
317 YIS5_YEAST/33-104 LKI
320 CABA_MOUSE/161-231 CEI
321 ROA1_BOVIN/106-176 CEV
322 SQD_DROME/138-208 VDV
323 RB97_DROME/34-104 VEA
330 TRA2_DROME/99-170 IRV
331 RU17_DROME/104-175 VLV
332 GBP2_YEAST/351-421 LQI
333 RNP1_YEAST/37-109 IVI
334 PES4_YEAST/305-374 LLV
335 YHH5_YEAST/315-384 IWV
336 YHC4_YEAST/348-415 MHV
337 IF39_YEAST/79-157 LFL
338 MEI2_SCHPO/197-265 LYF
339 NOP4_YEAST/292-363 IGD
340 MODU_DROME/260-326 ITV
341 ROF_HUMAN/113-183 IEV
342 MODU_DROME/342-410 WKL
343 NUCL_CHICK/283-352 IKL
344 NONA_DROME/378-448 SLR
345 PSF_HUMAN/373-443 TPR
346 NOP3_YEAST/202-270 ITV
347 SFR1_HUMAN/122-186 GET
348 CPO_DROME/453-526 QTI
349 WHI3_YEAST/540-614 VSS
350 RU1A_HUMAN/210-276 AMK
351 RU2B_HUMAN/153-220 MKI
352 RU1A_YEAST/229-293 DVT
353 MODU_DROME/177-246 LSV
354 PR24_YEAST/43-111 IIV
355 MODU_DROME/422-484 IFI
356 PR24_YEAST/212-284 ISV
357 SSB1_YEAST/39-114 IHI
359 RN12_YEAST/200-267 LHI
360 D111_ARATH/281-360 VRA
361 U2AG_HUMAN/67-142 IHA
362 IF39_SCHPO/41-124 FVV
365 PR24_YEAST/119-190 LVT