compactor work

[jalview.git] / forester / data / surfacing / pfam2go.txt

!version date: 2014/07/05 16:54:45
!description: Mapping of GO terms to Pfam entries. This mapping is generated from data supplied by InterPro for the InterPro2GO mapping.
!external resources: http://www.ebi.ac.uk/interpro, http://pfam.sanger.ac.uk/
!citation : Hunter et al. (2009) Nucleic Acids Res. 37 :D211-D215
!contact:interhelp@ebi.ac.uk
!
Pfam:PF00001 7tm_1 > GO:G-protein coupled receptor activity ; GO:0004930
Pfam:PF00001 7tm_1 > GO:G-protein coupled receptor signaling pathway ; GO:0007186
Pfam:PF00001 7tm_1 > GO:integral component of membrane ; GO:0016021
Pfam:PF00002 7tm_2 > GO:G-protein coupled receptor activity ; GO:0004930
Pfam:PF00002 7tm_2 > GO:G-protein coupled receptor signaling pathway ; GO:0007186
Pfam:PF00002 7tm_2 > GO:integral component of membrane ; GO:0016021
Pfam:PF00003 7tm_3 > GO:G-protein coupled receptor activity ; GO:0004930
Pfam:PF00003 7tm_3 > GO:G-protein coupled receptor signaling pathway ; GO:0007186
Pfam:PF00003 7tm_3 > GO:integral component of membrane ; GO:0016021
Pfam:PF00004 AAA > GO:ATP binding ; GO:0005524
Pfam:PF00005 ABC_tran > GO:ATP binding ; GO:0005524
Pfam:PF00005 ABC_tran > GO:ATPase activity ; GO:0016887
Pfam:PF00006 ATP-synt_ab > GO:ATP binding ; GO:0005524
Pfam:PF00008 EGF > GO:protein binding ; GO:0005515
Pfam:PF00009 GTP_EFTU > GO:GTPase activity ; GO:0003924
Pfam:PF00009 GTP_EFTU > GO:GTP binding ; GO:0005525
Pfam:PF00010 HLH > GO:protein dimerization activity ; GO:0046983
Pfam:PF00013 KH_1 > GO:RNA binding ; GO:0003723
Pfam:PF00014 Kunitz_BPTI > GO:serine-type endopeptidase inhibitor activity ; GO:0004867
Pfam:PF00015 MCPsignal > GO:signal transducer activity ; GO:0004871
Pfam:PF00015 MCPsignal > GO:signal transduction ; GO:0007165
Pfam:PF00015 MCPsignal > GO:membrane ; GO:0016020
Pfam:PF00016 RuBisCO_large > GO:magnesium ion binding ; GO:0000287
Pfam:PF00017 SH2 > GO:protein binding ; GO:0005515
Pfam:PF00018 SH3_1 > GO:protein binding ; GO:0005515
Pfam:PF00019 TGF_beta > GO:growth factor activity ; GO:0008083
Pfam:PF00020 TNFR_c6 > GO:protein binding ; GO:0005515
Pfam:PF00023 Ank > GO:protein binding ; GO:0005515
Pfam:PF00025 Arf > GO:GTP binding ; GO:0005525
Pfam:PF00026 Asp > GO:aspartic-type endopeptidase activity ; GO:0004190
Pfam:PF00026 Asp > GO:proteolysis ; GO:0006508
Pfam:PF00028 Cadherin > GO:calcium ion binding ; GO:0005509
Pfam:PF00028 Cadherin > GO:homophilic cell adhesion ; GO:0007156
Pfam:PF00028 Cadherin > GO:membrane ; GO:0016020
Pfam:PF00031 Cystatin > GO:cysteine-type endopeptidase inhibitor activity ; GO:0004869
Pfam:PF00032 Cytochrom_B_C > GO:electron carrier activity ; GO:0009055
Pfam:PF00032 Cytochrom_B_C > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00032 Cytochrom_B_C > GO:membrane ; GO:0016020
Pfam:PF00033 Cytochrom_B_N > GO:respiratory electron transport chain ; GO:0022904
Pfam:PF00033 Cytochrom_B_N > GO:membrane ; GO:0016020
Pfam:PF00034 Cytochrom_C > GO:iron ion binding ; GO:0005506
Pfam:PF00034 Cytochrom_C > GO:electron carrier activity ; GO:0009055
Pfam:PF00034 Cytochrom_C > GO:heme binding ; GO:0020037
Pfam:PF00036 EF-hand_1 > GO:calcium ion binding ; GO:0005509
Pfam:PF00037 Fer4 > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF00038 Filament > GO:structural molecule activity ; GO:0005198
Pfam:PF00038 Filament > GO:intermediate filament ; GO:0005882
Pfam:PF00039 fn1 > GO:extracellular region ; GO:0005576
Pfam:PF00041 fn3 > GO:protein binding ; GO:0005515
Pfam:PF00042 Globin > GO:iron ion binding ; GO:0005506
Pfam:PF00042 Globin > GO:heme binding ; GO:0020037
Pfam:PF00044 Gp_dh_N > GO:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor ; GO:0016620
Pfam:PF00044 Gp_dh_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00046 Homeobox > GO:DNA binding ; GO:0003677
Pfam:PF00048 IL8 > GO:chemokine activity ; GO:0008009
Pfam:PF00048 IL8 > GO:immune response ; GO:0006955
Pfam:PF00048 IL8 > GO:extracellular region ; GO:0005576
Pfam:PF00049 Insulin > GO:hormone activity ; GO:0005179
Pfam:PF00049 Insulin > GO:extracellular region ; GO:0005576
Pfam:PF00050 Kazal_1 > GO:protein binding ; GO:0005515
Pfam:PF00056 Ldh_1_N > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00056 Ldh_1_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00057 Ldl_recept_a > GO:protein binding ; GO:0005515
Pfam:PF00059 Lectin_C > GO:carbohydrate binding ; GO:0030246
Pfam:PF00060 Lig_chan > GO:ionotropic glutamate receptor activity ; GO:0004970
Pfam:PF00060 Lig_chan > GO:extracellular-glutamate-gated ion channel activity ; GO:0005234
Pfam:PF00060 Lig_chan > GO:membrane ; GO:0016020
Pfam:PF00063 Myosin_head > GO:motor activity ; GO:0003774
Pfam:PF00063 Myosin_head > GO:ATP binding ; GO:0005524
Pfam:PF00063 Myosin_head > GO:myosin complex ; GO:0016459
Pfam:PF00064 Neur > GO:exo-alpha-sialidase activity ; GO:0004308
Pfam:PF00064 Neur > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00064 Neur > GO:membrane ; GO:0016020
Pfam:PF00064 Neur > GO:host cell membrane ; GO:0033644
Pfam:PF00064 Neur > GO:virion membrane ; GO:0055036
Pfam:PF00066 Notch > GO:cell differentiation ; GO:0030154
Pfam:PF00066 Notch > GO:membrane ; GO:0016020
Pfam:PF00067 p450 > GO:iron ion binding ; GO:0005506
Pfam:PF00067 p450 > GO:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen ; GO:0016705
Pfam:PF00067 p450 > GO:heme binding ; GO:0020037
Pfam:PF00067 p450 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00069 Pkinase > GO:protein kinase activity ; GO:0004672
Pfam:PF00069 Pkinase > GO:ATP binding ; GO:0005524
Pfam:PF00069 Pkinase > GO:protein phosphorylation ; GO:0006468
Pfam:PF00070 Pyr_redox > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00070 Pyr_redox > GO:flavin adenine dinucleotide binding ; GO:0050660
Pfam:PF00070 Pyr_redox > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00071 Ras > GO:GTP binding ; GO:0005525
Pfam:PF00071 Ras > GO:small GTPase mediated signal transduction ; GO:0007264
Pfam:PF00072 Response_reg > GO:phosphorelay signal transduction system ; GO:0000160
Pfam:PF00073 Rhv > GO:structural molecule activity ; GO:0005198
Pfam:PF00073 Rhv > GO:viral capsid ; GO:0019028
Pfam:PF00075 RNase_H > GO:nucleic acid binding ; GO:0003676
Pfam:PF00075 RNase_H > GO:RNA-DNA hybrid ribonuclease activity ; GO:0004523
Pfam:PF00076 RRM_1 > GO:nucleic acid binding ; GO:0003676
Pfam:PF00080 Sod_Cu > GO:metal ion binding ; GO:0046872
Pfam:PF00080 Sod_Cu > GO:superoxide metabolic process ; GO:0006801
Pfam:PF00080 Sod_Cu > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00081 Sod_Fe_N > GO:superoxide dismutase activity ; GO:0004784
Pfam:PF00081 Sod_Fe_N > GO:metal ion binding ; GO:0046872
Pfam:PF00081 Sod_Fe_N > GO:superoxide metabolic process ; GO:0006801
Pfam:PF00081 Sod_Fe_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00082 Peptidase_S8 > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF00082 Peptidase_S8 > GO:proteolysis ; GO:0006508
Pfam:PF00083 Sugar_tr > GO:transmembrane transporter activity ; GO:0022857
Pfam:PF00083 Sugar_tr > GO:transmembrane transport ; GO:0055085
Pfam:PF00083 Sugar_tr > GO:integral component of membrane ; GO:0016021
Pfam:PF00085 Thioredoxin > GO:cell redox homeostasis ; GO:0045454
Pfam:PF00087 Toxin_1 > GO:extracellular region ; GO:0005576
Pfam:PF00089 Trypsin > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF00089 Trypsin > GO:proteolysis ; GO:0006508
Pfam:PF00093 VWC > GO:protein binding ; GO:0005515
Pfam:PF00095 WAP > GO:peptidase inhibitor activity ; GO:0030414
Pfam:PF00095 WAP > GO:extracellular region ; GO:0005576
Pfam:PF00096 zf-C2H2 > GO:metal ion binding ; GO:0046872
Pfam:PF00097 zf-C3HC4 > GO:metal ion binding ; GO:0046872
Pfam:PF00098 zf-CCHC > GO:nucleic acid binding ; GO:0003676
Pfam:PF00098 zf-CCHC > GO:zinc ion binding ; GO:0008270
Pfam:PF00102 Y_phosphatase > GO:protein tyrosine phosphatase activity ; GO:0004725
Pfam:PF00102 Y_phosphatase > GO:protein dephosphorylation ; GO:0006470
Pfam:PF00103 Hormone_1 > GO:hormone activity ; GO:0005179
Pfam:PF00103 Hormone_1 > GO:extracellular region ; GO:0005576
Pfam:PF00104 Hormone_recep > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00104 Hormone_recep > GO:steroid hormone receptor activity ; GO:0003707
Pfam:PF00104 Hormone_recep > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00104 Hormone_recep > GO:steroid hormone mediated signaling pathway ; GO:0043401
Pfam:PF00104 Hormone_recep > GO:nucleus ; GO:0005634
Pfam:PF00105 zf-C4 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00105 zf-C4 > GO:zinc ion binding ; GO:0008270
Pfam:PF00105 zf-C4 > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF00105 zf-C4 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00105 zf-C4 > GO:nucleus ; GO:0005634
Pfam:PF00106 adh_short > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00106 adh_short > GO:metabolic process ; GO:0008152
Pfam:PF00107 ADH_zinc_N > GO:zinc ion binding ; GO:0008270
Pfam:PF00107 ADH_zinc_N > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00107 ADH_zinc_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00108 Thiolase_N > GO:transferase activity, transferring acyl groups other than amino-acyl groups ; GO:0016747
Pfam:PF00108 Thiolase_N > GO:metabolic process ; GO:0008152
Pfam:PF00110 wnt > GO:receptor binding ; GO:0005102
Pfam:PF00110 wnt > GO:multicellular organismal development ; GO:0007275
Pfam:PF00110 wnt > GO:Wnt signaling pathway ; GO:0016055
Pfam:PF00110 wnt > GO:extracellular region ; GO:0005576
Pfam:PF00111 Fer2 > GO:electron carrier activity ; GO:0009055
Pfam:PF00111 Fer2 > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF00112 Peptidase_C1 > GO:cysteine-type peptidase activity ; GO:0008234
Pfam:PF00112 Peptidase_C1 > GO:proteolysis ; GO:0006508
Pfam:PF00113 Enolase_C > GO:magnesium ion binding ; GO:0000287
Pfam:PF00113 Enolase_C > GO:phosphopyruvate hydratase activity ; GO:0004634
Pfam:PF00113 Enolase_C > GO:glycolytic process ; GO:0006096
Pfam:PF00113 Enolase_C > GO:phosphopyruvate hydratase complex ; GO:0000015
Pfam:PF00114 Pilin > GO:cell adhesion ; GO:0007155
Pfam:PF00114 Pilin > GO:pilus ; GO:0009289
Pfam:PF00115 COX1 > GO:cytochrome-c oxidase activity ; GO:0004129
Pfam:PF00115 COX1 > GO:iron ion binding ; GO:0005506
Pfam:PF00115 COX1 > GO:electron carrier activity ; GO:0009055
Pfam:PF00115 COX1 > GO:heme binding ; GO:0020037
Pfam:PF00115 COX1 > GO:aerobic respiration ; GO:0009060
Pfam:PF00115 COX1 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00115 COX1 > GO:integral component of membrane ; GO:0016021
Pfam:PF00116 COX2 > GO:cytochrome-c oxidase activity ; GO:0004129
Pfam:PF00116 COX2 > GO:copper ion binding ; GO:0005507
Pfam:PF00116 COX2 > GO:membrane ; GO:0016020
Pfam:PF00118 Cpn60_TCP1 > GO:ATP binding ; GO:0005524
Pfam:PF00118 Cpn60_TCP1 > GO:cellular protein metabolic process ; GO:0044267
Pfam:PF00119 ATP-synt_A > GO:hydrogen ion transmembrane transporter activity ; GO:0015078
Pfam:PF00119 ATP-synt_A > GO:ATP synthesis coupled proton transport ; GO:0015986
Pfam:PF00119 ATP-synt_A > GO:proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0045263
Pfam:PF00120 Gln-synt_C > GO:glutamate-ammonia ligase activity ; GO:0004356
Pfam:PF00120 Gln-synt_C > GO:nitrogen compound metabolic process ; GO:0006807
Pfam:PF00121 TIM > GO:triose-phosphate isomerase activity ; GO:0004807
Pfam:PF00121 TIM > GO:metabolic process ; GO:0008152
Pfam:PF00122 E1-E2_ATPase > GO:nucleotide binding ; GO:0000166
Pfam:PF00122 E1-E2_ATPase > GO:metal ion binding ; GO:0046872
Pfam:PF00123 Hormone_2 > GO:hormone activity ; GO:0005179
Pfam:PF00123 Hormone_2 > GO:extracellular region ; GO:0005576
Pfam:PF00124 Photo_RC > GO:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ; GO:0045156
Pfam:PF00124 Photo_RC > GO:photosynthetic electron transport in photosystem II ; GO:0009772
Pfam:PF00124 Photo_RC > GO:photosynthesis, light reaction ; GO:0019684
Pfam:PF00125 Histone > GO:DNA binding ; GO:0003677
Pfam:PF00126 HTH_1 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00126 HTH_1 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00127 Copper-bind > GO:copper ion binding ; GO:0005507
Pfam:PF00127 Copper-bind > GO:electron carrier activity ; GO:0009055
Pfam:PF00128 Alpha-amylase > GO:catalytic activity ; GO:0003824
Pfam:PF00128 Alpha-amylase > GO:cation binding ; GO:0043169
Pfam:PF00128 Alpha-amylase > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00129 MHC_I > GO:immune response ; GO:0006955
Pfam:PF00129 MHC_I > GO:antigen processing and presentation ; GO:0019882
Pfam:PF00130 C1_1 > GO:intracellular signal transduction ; GO:0035556
Pfam:PF00131 Metallothio > GO:metal ion binding ; GO:0046872
Pfam:PF00133 tRNA-synt_1 > GO:nucleotide binding ; GO:0000166
Pfam:PF00133 tRNA-synt_1 > GO:aminoacyl-tRNA ligase activity ; GO:0004812
Pfam:PF00133 tRNA-synt_1 > GO:ATP binding ; GO:0005524
Pfam:PF00133 tRNA-synt_1 > GO:tRNA aminoacylation for protein translation ; GO:0006418
Pfam:PF00136 DNA_pol_B > GO:nucleotide binding ; GO:0000166
Pfam:PF00136 DNA_pol_B > GO:DNA binding ; GO:0003677
Pfam:PF00136 DNA_pol_B > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF00136 DNA_pol_B > GO:DNA replication ; GO:0006260
Pfam:PF00137 ATP-synt_C > GO:hydrogen ion transmembrane transporter activity ; GO:0015078
Pfam:PF00137 ATP-synt_C > GO:ATP hydrolysis coupled proton transport ; GO:0015991
Pfam:PF00137 ATP-synt_C > GO:proton-transporting two-sector ATPase complex, proton-transporting domain ; GO:0033177
Pfam:PF00139 Lectin_legB > GO:carbohydrate binding ; GO:0030246
Pfam:PF00140 Sigma70_r1_2 > GO:DNA binding ; GO:0003677
Pfam:PF00140 Sigma70_r1_2 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00140 Sigma70_r1_2 > GO:sigma factor activity ; GO:0016987
Pfam:PF00140 Sigma70_r1_2 > GO:DNA-templated transcription, initiation ; GO:0006352
Pfam:PF00140 Sigma70_r1_2 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00141 peroxidase > GO:peroxidase activity ; GO:0004601
Pfam:PF00141 peroxidase > GO:heme binding ; GO:0020037
Pfam:PF00141 peroxidase > GO:response to oxidative stress ; GO:0006979
Pfam:PF00141 peroxidase > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00142 Fer4_NifH > GO:ATP binding ; GO:0005524
Pfam:PF00142 Fer4_NifH > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00142 Fer4_NifH > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00143 Interferon > GO:cytokine receptor binding ; GO:0005126
Pfam:PF00143 Interferon > GO:defense response ; GO:0006952
Pfam:PF00143 Interferon > GO:extracellular region ; GO:0005576
Pfam:PF00145 DNA_methylase > GO:methyltransferase activity ; GO:0008168
Pfam:PF00146 NADHdh > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00146 NADHdh > GO:membrane ; GO:0016020
Pfam:PF00148 Oxidored_nitro > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00148 Oxidored_nitro > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00149 Metallophos > GO:hydrolase activity ; GO:0016787
Pfam:PF00150 Cellulase > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF00150 Cellulase > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00152 tRNA-synt_2 > GO:nucleotide binding ; GO:0000166
Pfam:PF00152 tRNA-synt_2 > GO:aminoacyl-tRNA ligase activity ; GO:0004812
Pfam:PF00152 tRNA-synt_2 > GO:ATP binding ; GO:0005524
Pfam:PF00152 tRNA-synt_2 > GO:tRNA aminoacylation for protein translation ; GO:0006418
Pfam:PF00154 RecA > GO:single-stranded DNA binding ; GO:0003697
Pfam:PF00154 RecA > GO:ATP binding ; GO:0005524
Pfam:PF00154 RecA > GO:DNA repair ; GO:0006281
Pfam:PF00154 RecA > GO:SOS response ; GO:0009432
Pfam:PF00155 Aminotran_1_2 > GO:pyridoxal phosphate binding ; GO:0030170
Pfam:PF00155 Aminotran_1_2 > GO:biosynthetic process ; GO:0009058
Pfam:PF00156 Pribosyltran > GO:nucleoside metabolic process ; GO:0009116
Pfam:PF00157 Pou > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00157 Pou > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00158 Sigma54_activat > GO:ATP binding ; GO:0005524
Pfam:PF00158 Sigma54_activat > GO:transcription factor binding ; GO:0008134
Pfam:PF00158 Sigma54_activat > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00159 Hormone_3 > GO:hormone activity ; GO:0005179
Pfam:PF00159 Hormone_3 > GO:extracellular region ; GO:0005576
Pfam:PF00160 Pro_isomerase > GO:peptidyl-prolyl cis-trans isomerase activity ; GO:0003755
Pfam:PF00160 Pro_isomerase > GO:protein peptidyl-prolyl isomerization ; GO:0000413
Pfam:PF00160 Pro_isomerase > GO:protein folding ; GO:0006457
Pfam:PF00161 RIP > GO:rRNA N-glycosylase activity ; GO:0030598
Pfam:PF00161 RIP > GO:negative regulation of translation ; GO:0017148
Pfam:PF00162 PGK > GO:phosphoglycerate kinase activity ; GO:0004618
Pfam:PF00162 PGK > GO:glycolytic process ; GO:0006096
Pfam:PF00163 Ribosomal_S4 > GO:rRNA binding ; GO:0019843
Pfam:PF00163 Ribosomal_S4 > GO:intracellular ; GO:0005622
Pfam:PF00164 Ribosom_S12_S23 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00164 Ribosom_S12_S23 > GO:translation ; GO:0006412
Pfam:PF00164 Ribosom_S12_S23 > GO:intracellular ; GO:0005622
Pfam:PF00164 Ribosom_S12_S23 > GO:ribosome ; GO:0005840
Pfam:PF00165 HTH_AraC > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00165 HTH_AraC > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF00165 HTH_AraC > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00166 Cpn10 > GO:protein folding ; GO:0006457
Pfam:PF00166 Cpn10 > GO:cytoplasm ; GO:0005737
Pfam:PF00168 C2 > GO:protein binding ; GO:0005515
Pfam:PF00170 bZIP_1 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00170 bZIP_1 > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF00170 bZIP_1 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00171 Aldedh > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00171 Aldedh > GO:metabolic process ; GO:0008152
Pfam:PF00171 Aldedh > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00172 Zn_clus > GO:sequence-specific DNA binding RNA polymerase II transcription factor activity ; GO:0000981
Pfam:PF00172 Zn_clus > GO:zinc ion binding ; GO:0008270
Pfam:PF00172 Zn_clus > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00172 Zn_clus > GO:nucleus ; GO:0005634
Pfam:PF00173 Cyt-b5 > GO:heme binding ; GO:0020037
Pfam:PF00174 Oxidored_molyb > GO:electron carrier activity ; GO:0009055
Pfam:PF00174 Oxidored_molyb > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00175 NAD_binding_1 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00175 NAD_binding_1 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00176 SNF2_N > GO:DNA binding ; GO:0003677
Pfam:PF00176 SNF2_N > GO:ATP binding ; GO:0005524
Pfam:PF00178 Ets > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00178 Ets > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF00178 Ets > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00179 UQ_con > GO:acid-amino acid ligase activity ; GO:0016881
Pfam:PF00180 Iso_dh > GO:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ; GO:0016616
Pfam:PF00180 Iso_dh > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00181 Ribosomal_L2 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00181 Ribosomal_L2 > GO:translation ; GO:0006412
Pfam:PF00181 Ribosomal_L2 > GO:intracellular ; GO:0005622
Pfam:PF00181 Ribosomal_L2 > GO:ribosome ; GO:0005840
Pfam:PF00182 Glyco_hydro_19 > GO:chitinase activity ; GO:0004568
Pfam:PF00182 Glyco_hydro_19 > GO:chitin catabolic process ; GO:0006032
Pfam:PF00182 Glyco_hydro_19 > GO:cell wall macromolecule catabolic process ; GO:0016998
Pfam:PF00183 HSP90 > GO:ATP binding ; GO:0005524
Pfam:PF00183 HSP90 > GO:unfolded protein binding ; GO:0051082
Pfam:PF00183 HSP90 > GO:protein folding ; GO:0006457
Pfam:PF00183 HSP90 > GO:response to stress ; GO:0006950
Pfam:PF00184 Hormone_5 > GO:neurohypophyseal hormone activity ; GO:0005185
Pfam:PF00184 Hormone_5 > GO:extracellular region ; GO:0005576
Pfam:PF00185 OTCace > GO:amino acid binding ; GO:0016597
Pfam:PF00185 OTCace > GO:carboxyl- or carbamoyltransferase activity ; GO:0016743
Pfam:PF00185 OTCace > GO:cellular amino acid metabolic process ; GO:0006520
Pfam:PF00186 DHFR_1 > GO:dihydrofolate reductase activity ; GO:0004146
Pfam:PF00186 DHFR_1 > GO:glycine biosynthetic process ; GO:0006545
Pfam:PF00186 DHFR_1 > GO:nucleotide biosynthetic process ; GO:0009165
Pfam:PF00186 DHFR_1 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00187 Chitin_bind_1 > GO:chitin binding ; GO:0008061
Pfam:PF00189 Ribosomal_S3_C > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00189 Ribosomal_S3_C > GO:translation ; GO:0006412
Pfam:PF00189 Ribosomal_S3_C > GO:ribosome ; GO:0005840
Pfam:PF00190 Cupin_1 > GO:nutrient reservoir activity ; GO:0045735
Pfam:PF00191 Annexin > GO:calcium ion binding ; GO:0005509
Pfam:PF00191 Annexin > GO:calcium-dependent phospholipid binding ; GO:0005544
Pfam:PF00193 Xlink > GO:hyaluronic acid binding ; GO:0005540
Pfam:PF00193 Xlink > GO:cell adhesion ; GO:0007155
Pfam:PF00195 Chal_sti_synt_N > GO:transferase activity, transferring acyl groups ; GO:0016746
Pfam:PF00195 Chal_sti_synt_N > GO:biosynthetic process ; GO:0009058
Pfam:PF00196 GerE > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00196 GerE > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00197 Kunitz_legume > GO:endopeptidase inhibitor activity ; GO:0004866
Pfam:PF00198 2-oxoacid_dh > GO:transferase activity, transferring acyl groups ; GO:0016746
Pfam:PF00198 2-oxoacid_dh > GO:metabolic process ; GO:0008152
Pfam:PF00199 Catalase > GO:catalase activity ; GO:0004096
Pfam:PF00199 Catalase > GO:heme binding ; GO:0020037
Pfam:PF00199 Catalase > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00201 UDPGT > GO:transferase activity, transferring hexosyl groups ; GO:0016758
Pfam:PF00201 UDPGT > GO:metabolic process ; GO:0008152
Pfam:PF00202 Aminotran_3 > GO:transaminase activity ; GO:0008483
Pfam:PF00202 Aminotran_3 > GO:pyridoxal phosphate binding ; GO:0030170
Pfam:PF00203 Ribosomal_S19 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00203 Ribosomal_S19 > GO:translation ; GO:0006412
Pfam:PF00203 Ribosomal_S19 > GO:ribosome ; GO:0005840
Pfam:PF00204 DNA_gyraseB > GO:DNA binding ; GO:0003677
Pfam:PF00204 DNA_gyraseB > GO:DNA topoisomerase type II (ATP-hydrolyzing) activity ; GO:0003918
Pfam:PF00204 DNA_gyraseB > GO:ATP binding ; GO:0005524
Pfam:PF00204 DNA_gyraseB > GO:DNA topological change ; GO:0006265
Pfam:PF00205 TPP_enzyme_M > GO:magnesium ion binding ; GO:0000287
Pfam:PF00205 TPP_enzyme_M > GO:thiamine pyrophosphate binding ; GO:0030976
Pfam:PF00207 A2M > GO:endopeptidase inhibitor activity ; GO:0004866
Pfam:PF00208 ELFV_dehydrog > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00208 ELFV_dehydrog > GO:cellular amino acid metabolic process ; GO:0006520
Pfam:PF00208 ELFV_dehydrog > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00209 SNF > GO:neurotransmitter:sodium symporter activity ; GO:0005328
Pfam:PF00209 SNF > GO:neurotransmitter transport ; GO:0006836
Pfam:PF00209 SNF > GO:integral component of membrane ; GO:0016021
Pfam:PF00210 Ferritin > GO:ferric iron binding ; GO:0008199
Pfam:PF00210 Ferritin > GO:cellular iron ion homeostasis ; GO:0006879
Pfam:PF00211 Guanylate_cyc > GO:phosphorus-oxygen lyase activity ; GO:0016849
Pfam:PF00211 Guanylate_cyc > GO:cyclic nucleotide biosynthetic process ; GO:0009190
Pfam:PF00211 Guanylate_cyc > GO:intracellular signal transduction ; GO:0035556
Pfam:PF00212 ANP > GO:hormone activity ; GO:0005179
Pfam:PF00212 ANP > GO:extracellular region ; GO:0005576
Pfam:PF00213 OSCP > GO:proton-transporting ATP synthase activity, rotational mechanism ; GO:0046933
Pfam:PF00213 OSCP > GO:ATP synthesis coupled proton transport ; GO:0015986
Pfam:PF00214 Calc_CGRP_IAPP > GO:hormone activity ; GO:0005179
Pfam:PF00214 Calc_CGRP_IAPP > GO:extracellular region ; GO:0005576
Pfam:PF00215 OMPdecase > GO:orotidine-5'-phosphate decarboxylase activity ; GO:0004590
Pfam:PF00215 OMPdecase > GO:'de novo' pyrimidine nucleobase biosynthetic process ; GO:0006207
Pfam:PF00216 Bac_DNA_binding > GO:DNA binding ; GO:0003677
Pfam:PF00217 ATP-gua_Ptrans > GO:kinase activity ; GO:0016301
Pfam:PF00217 ATP-gua_Ptrans > GO:transferase activity, transferring phosphorus-containing groups ; GO:0016772
Pfam:PF00218 IGPS > GO:indole-3-glycerol-phosphate synthase activity ; GO:0004425
Pfam:PF00219 IGFBP > GO:insulin-like growth factor binding ; GO:0005520
Pfam:PF00219 IGFBP > GO:regulation of cell growth ; GO:0001558
Pfam:PF00219 IGFBP > GO:extracellular region ; GO:0005576
Pfam:PF00220 Hormone_4 > GO:neurohypophyseal hormone activity ; GO:0005185
Pfam:PF00220 Hormone_4 > GO:extracellular region ; GO:0005576
Pfam:PF00221 Lyase_aromatic > GO:ammonia-lyase activity ; GO:0016841
Pfam:PF00221 Lyase_aromatic > GO:biosynthetic process ; GO:0009058
Pfam:PF00223 PsaA_PsaB > GO:photosynthesis ; GO:0015979
Pfam:PF00223 PsaA_PsaB > GO:photosystem I ; GO:0009522
Pfam:PF00223 PsaA_PsaB > GO:thylakoid ; GO:0009579
Pfam:PF00223 PsaA_PsaB > GO:integral component of membrane ; GO:0016021
Pfam:PF00224 PK > GO:magnesium ion binding ; GO:0000287
Pfam:PF00224 PK > GO:pyruvate kinase activity ; GO:0004743
Pfam:PF00224 PK > GO:potassium ion binding ; GO:0030955
Pfam:PF00224 PK > GO:glycolytic process ; GO:0006096
Pfam:PF00225 Kinesin > GO:microtubule motor activity ; GO:0003777
Pfam:PF00225 Kinesin > GO:ATP binding ; GO:0005524
Pfam:PF00225 Kinesin > GO:microtubule binding ; GO:0008017
Pfam:PF00225 Kinesin > GO:microtubule-based movement ; GO:0007018
Pfam:PF00227 Proteasome > GO:threonine-type endopeptidase activity ; GO:0004298
Pfam:PF00227 Proteasome > GO:proteolysis involved in cellular protein catabolic process ; GO:0051603
Pfam:PF00227 Proteasome > GO:proteasome core complex ; GO:0005839
Pfam:PF00228 Bowman-Birk_leg > GO:serine-type endopeptidase inhibitor activity ; GO:0004867
Pfam:PF00228 Bowman-Birk_leg > GO:extracellular region ; GO:0005576
Pfam:PF00229 TNF > GO:tumor necrosis factor receptor binding ; GO:0005164
Pfam:PF00229 TNF > GO:immune response ; GO:0006955
Pfam:PF00229 TNF > GO:membrane ; GO:0016020
Pfam:PF00230 MIP > GO:transporter activity ; GO:0005215
Pfam:PF00230 MIP > GO:transport ; GO:0006810
Pfam:PF00230 MIP > GO:membrane ; GO:0016020
Pfam:PF00231 ATP-synt > GO:proton-transporting ATP synthase activity, rotational mechanism ; GO:0046933
Pfam:PF00231 ATP-synt > GO:proton-transporting ATPase activity, rotational mechanism ; GO:0046961
Pfam:PF00231 ATP-synt > GO:ATP synthesis coupled proton transport ; GO:0015986
Pfam:PF00231 ATP-synt > GO:proton-transporting ATP synthase complex, catalytic core F(1) ; GO:0045261
Pfam:PF00232 Glyco_hydro_1 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF00232 Glyco_hydro_1 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00233 PDEase_I > GO:3',5'-cyclic-nucleotide phosphodiesterase activity ; GO:0004114
Pfam:PF00233 PDEase_I > GO:signal transduction ; GO:0007165
Pfam:PF00235 Profilin > GO:actin binding ; GO:0003779
Pfam:PF00235 Profilin > GO:actin cytoskeleton organization ; GO:0030036
Pfam:PF00236 Hormone_6 > GO:hormone activity ; GO:0005179
Pfam:PF00236 Hormone_6 > GO:extracellular region ; GO:0005576
Pfam:PF00237 Ribosomal_L22 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00237 Ribosomal_L22 > GO:translation ; GO:0006412
Pfam:PF00237 Ribosomal_L22 > GO:ribosome ; GO:0005840
Pfam:PF00238 Ribosomal_L14 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00238 Ribosomal_L14 > GO:translation ; GO:0006412
Pfam:PF00238 Ribosomal_L14 > GO:ribosome ; GO:0005840
Pfam:PF00239 Resolvase > GO:recombinase activity ; GO:0000150
Pfam:PF00239 Resolvase > GO:DNA binding ; GO:0003677
Pfam:PF00239 Resolvase > GO:DNA recombination ; GO:0006310
Pfam:PF00240 ubiquitin > GO:protein binding ; GO:0005515
Pfam:PF00241 Cofilin_ADF > GO:actin binding ; GO:0003779
Pfam:PF00241 Cofilin_ADF > GO:intracellular ; GO:0005622
Pfam:PF00242 DNA_pol_viral_N > GO:DNA binding ; GO:0003677
Pfam:PF00242 DNA_pol_viral_N > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF00242 DNA_pol_viral_N > GO:DNA replication ; GO:0006260
Pfam:PF00243 NGF > GO:receptor binding ; GO:0005102
Pfam:PF00245 Alk_phosphatase > GO:phosphatase activity ; GO:0016791
Pfam:PF00245 Alk_phosphatase > GO:metabolic process ; GO:0008152
Pfam:PF00246 Peptidase_M14 > GO:metallocarboxypeptidase activity ; GO:0004181
Pfam:PF00246 Peptidase_M14 > GO:zinc ion binding ; GO:0008270
Pfam:PF00246 Peptidase_M14 > GO:proteolysis ; GO:0006508
Pfam:PF00249 Myb_DNA-binding > GO:chromatin binding ; GO:0003682
Pfam:PF00250 Fork_head > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00250 Fork_head > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF00250 Fork_head > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00252 Ribosomal_L16 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00252 Ribosomal_L16 > GO:translation ; GO:0006412
Pfam:PF00252 Ribosomal_L16 > GO:ribosome ; GO:0005840
Pfam:PF00253 Ribosomal_S14 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00253 Ribosomal_S14 > GO:translation ; GO:0006412
Pfam:PF00253 Ribosomal_S14 > GO:intracellular ; GO:0005622
Pfam:PF00253 Ribosomal_S14 > GO:ribosome ; GO:0005840
Pfam:PF00254 FKBP_C > GO:protein folding ; GO:0006457
Pfam:PF00255 GSHPx > GO:glutathione peroxidase activity ; GO:0004602
Pfam:PF00255 GSHPx > GO:response to oxidative stress ; GO:0006979
Pfam:PF00255 GSHPx > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00257 Dehydrin > GO:response to stress ; GO:0006950
Pfam:PF00257 Dehydrin > GO:response to water ; GO:0009415
Pfam:PF00258 Flavodoxin_1 > GO:FMN binding ; GO:0010181
Pfam:PF00258 Flavodoxin_1 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00260 Protamine_P1 > GO:DNA binding ; GO:0003677
Pfam:PF00260 Protamine_P1 > GO:spermatogenesis ; GO:0007283
Pfam:PF00260 Protamine_P1 > GO:nucleosome ; GO:0000786
Pfam:PF00260 Protamine_P1 > GO:nucleus ; GO:0005634
Pfam:PF00262 Calreticulin > GO:calcium ion binding ; GO:0005509
Pfam:PF00262 Calreticulin > GO:unfolded protein binding ; GO:0051082
Pfam:PF00262 Calreticulin > GO:protein folding ; GO:0006457
Pfam:PF00262 Calreticulin > GO:endoplasmic reticulum ; GO:0005783
Pfam:PF00263 Secretin > GO:protein secretion ; GO:0009306
Pfam:PF00264 Tyrosinase > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00264 Tyrosinase > GO:metabolic process ; GO:0008152
Pfam:PF00265 TK > GO:thymidine kinase activity ; GO:0004797
Pfam:PF00265 TK > GO:ATP binding ; GO:0005524
Pfam:PF00266 Aminotran_5 > GO:metabolic process ; GO:0008152
Pfam:PF00267 Porin_1 > GO:porin activity ; GO:0015288
Pfam:PF00267 Porin_1 > GO:transport ; GO:0006810
Pfam:PF00267 Porin_1 > GO:membrane ; GO:0016020
Pfam:PF00268 Ribonuc_red_sm > GO:deoxyribonucleoside diphosphate metabolic process ; GO:0009186
Pfam:PF00268 Ribonuc_red_sm > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00269 SASP > GO:double-stranded DNA binding ; GO:0003690
Pfam:PF00269 SASP > GO:DNA topological change ; GO:0006265
Pfam:PF00270 DEAD > GO:nucleic acid binding ; GO:0003676
Pfam:PF00270 DEAD > GO:ATP binding ; GO:0005524
Pfam:PF00272 Cecropin > GO:extracellular region ; GO:0005576
Pfam:PF00273 Serum_albumin > GO:extracellular space ; GO:0005615
Pfam:PF00274 Glycolytic > GO:fructose-bisphosphate aldolase activity ; GO:0004332
Pfam:PF00274 Glycolytic > GO:glycolytic process ; GO:0006096
Pfam:PF00275 EPSP_synthase > GO:transferase activity, transferring alkyl or aryl (other than methyl) groups ; GO:0016765
Pfam:PF00276 Ribosomal_L23 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00276 Ribosomal_L23 > GO:translation ; GO:0006412
Pfam:PF00276 Ribosomal_L23 > GO:ribosome ; GO:0005840
Pfam:PF00277 SAA > GO:acute-phase response ; GO:0006953
Pfam:PF00277 SAA > GO:extracellular region ; GO:0005576
Pfam:PF00278 Orn_DAP_Arg_deC > GO:catalytic activity ; GO:0003824
Pfam:PF00280 potato_inhibit > GO:serine-type endopeptidase inhibitor activity ; GO:0004867
Pfam:PF00280 potato_inhibit > GO:response to wounding ; GO:0009611
Pfam:PF00281 Ribosomal_L5 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00281 Ribosomal_L5 > GO:translation ; GO:0006412
Pfam:PF00281 Ribosomal_L5 > GO:ribosome ; GO:0005840
Pfam:PF00282 Pyridoxal_deC > GO:carboxy-lyase activity ; GO:0016831
Pfam:PF00282 Pyridoxal_deC > GO:pyridoxal phosphate binding ; GO:0030170
Pfam:PF00282 Pyridoxal_deC > GO:carboxylic acid metabolic process ; GO:0019752
Pfam:PF00283 Cytochrom_B559 > GO:photosynthesis ; GO:0015979
Pfam:PF00284 Cytochrom_B559a > GO:metal ion binding ; GO:0046872
Pfam:PF00284 Cytochrom_B559a > GO:photosynthesis ; GO:0015979
Pfam:PF00284 Cytochrom_B559a > GO:photosystem II ; GO:0009523
Pfam:PF00284 Cytochrom_B559a > GO:integral component of membrane ; GO:0016021
Pfam:PF00285 Citrate_synt > GO:transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer ; GO:0046912
Pfam:PF00285 Citrate_synt > GO:cellular carbohydrate metabolic process ; GO:0044262
Pfam:PF00286 Flexi_CP > GO:structural molecule activity ; GO:0005198
Pfam:PF00286 Flexi_CP > GO:viral capsid ; GO:0019028
Pfam:PF00287 Na_K-ATPase > GO:potassium ion transport ; GO:0006813
Pfam:PF00287 Na_K-ATPase > GO:sodium ion transport ; GO:0006814
Pfam:PF00287 Na_K-ATPase > GO:sodium:potassium-exchanging ATPase complex ; GO:0005890
Pfam:PF00288 GHMP_kinases_N > GO:ATP binding ; GO:0005524
Pfam:PF00289 CPSase_L_chain > GO:catalytic activity ; GO:0003824
Pfam:PF00289 CPSase_L_chain > GO:metabolic process ; GO:0008152
Pfam:PF00290 Trp_syntA > GO:tryptophan synthase activity ; GO:0004834
Pfam:PF00290 Trp_syntA > GO:tryptophan metabolic process ; GO:0006568
Pfam:PF00292 PAX > GO:DNA binding ; GO:0003677
Pfam:PF00292 PAX > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00293 NUDIX > GO:hydrolase activity ; GO:0016787
Pfam:PF00295 Glyco_hydro_28 > GO:polygalacturonase activity ; GO:0004650
Pfam:PF00295 Glyco_hydro_28 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00296 Bac_luciferase > GO:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen ; GO:0016705
Pfam:PF00296 Bac_luciferase > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00297 Ribosomal_L3 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00297 Ribosomal_L3 > GO:translation ; GO:0006412
Pfam:PF00297 Ribosomal_L3 > GO:intracellular ; GO:0005622
Pfam:PF00297 Ribosomal_L3 > GO:ribosome ; GO:0005840
Pfam:PF00298 Ribosomal_L11 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00298 Ribosomal_L11 > GO:translation ; GO:0006412
Pfam:PF00298 Ribosomal_L11 > GO:ribosome ; GO:0005840
Pfam:PF00299 Squash > GO:serine-type endopeptidase inhibitor activity ; GO:0004867
Pfam:PF00301 Rubredoxin > GO:iron ion binding ; GO:0005506
Pfam:PF00302 CAT > GO:chloramphenicol O-acetyltransferase activity ; GO:0008811
Pfam:PF00303 Thymidylat_synt > GO:thymidylate synthase activity ; GO:0004799
Pfam:PF00303 Thymidylat_synt > GO:dTMP biosynthetic process ; GO:0006231
Pfam:PF00304 Gamma-thionin > GO:defense response ; GO:0006952
Pfam:PF00305 Lipoxygenase > GO:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen ; GO:0016702
Pfam:PF00305 Lipoxygenase > GO:metal ion binding ; GO:0046872
Pfam:PF00305 Lipoxygenase > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00306 ATP-synt_ab_C > GO:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances ; GO:0016820
Pfam:PF00306 ATP-synt_ab_C > GO:ATP hydrolysis coupled proton transport ; GO:0015991
Pfam:PF00306 ATP-synt_ab_C > GO:proton-transporting two-sector ATPase complex, catalytic domain ; GO:0033178
Pfam:PF00307 CH > GO:protein binding ; GO:0005515
Pfam:PF00309 Sigma54_AID > GO:DNA binding ; GO:0003677
Pfam:PF00309 Sigma54_AID > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00309 Sigma54_AID > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF00309 Sigma54_AID > GO:sigma factor activity ; GO:0016987
Pfam:PF00309 Sigma54_AID > GO:DNA-templated transcription, initiation ; GO:0006352
Pfam:PF00309 Sigma54_AID > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00310 GATase_2 > GO:metabolic process ; GO:0008152
Pfam:PF00311 PEPcase > GO:phosphoenolpyruvate carboxylase activity ; GO:0008964
Pfam:PF00311 PEPcase > GO:tricarboxylic acid cycle ; GO:0006099
Pfam:PF00311 PEPcase > GO:carbon fixation ; GO:0015977
Pfam:PF00312 Ribosomal_S15 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00312 Ribosomal_S15 > GO:translation ; GO:0006412
Pfam:PF00312 Ribosomal_S15 > GO:intracellular ; GO:0005622
Pfam:PF00312 Ribosomal_S15 > GO:ribosome ; GO:0005840
Pfam:PF00313 CSD > GO:DNA binding ; GO:0003677
Pfam:PF00313 CSD > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00316 FBPase > GO:fructose 1,6-bisphosphate 1-phosphatase activity ; GO:0042132
Pfam:PF00316 FBPase > GO:phosphoric ester hydrolase activity ; GO:0042578
Pfam:PF00316 FBPase > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00317 Ribonuc_red_lgN > GO:ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor ; GO:0004748
Pfam:PF00317 Ribonuc_red_lgN > GO:ATP binding ; GO:0005524
Pfam:PF00317 Ribonuc_red_lgN > GO:DNA replication ; GO:0006260
Pfam:PF00317 Ribonuc_red_lgN > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00318 Ribosomal_S2 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00318 Ribosomal_S2 > GO:translation ; GO:0006412
Pfam:PF00318 Ribosomal_S2 > GO:intracellular ; GO:0005622
Pfam:PF00318 Ribosomal_S2 > GO:ribosome ; GO:0005840
Pfam:PF00319 SRF-TF > GO:DNA binding ; GO:0003677
Pfam:PF00319 SRF-TF > GO:protein dimerization activity ; GO:0046983
Pfam:PF00320 GATA > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00320 GATA > GO:zinc ion binding ; GO:0008270
Pfam:PF00320 GATA > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF00320 GATA > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00321 Thionin > GO:defense response ; GO:0006952
Pfam:PF00322 Endothelin > GO:regulation of vasoconstriction ; GO:0019229
Pfam:PF00322 Endothelin > GO:extracellular region ; GO:0005576
Pfam:PF00323 Defensin_1 > GO:defense response ; GO:0006952
Pfam:PF00323 Defensin_1 > GO:extracellular region ; GO:0005576
Pfam:PF00324 AA_permease > GO:transport ; GO:0006810
Pfam:PF00324 AA_permease > GO:transmembrane transport ; GO:0055085
Pfam:PF00324 AA_permease > GO:membrane ; GO:0016020
Pfam:PF00325 Crp > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00325 Crp > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00325 Crp > GO:intracellular ; GO:0005622
Pfam:PF00326 Peptidase_S9 > GO:serine-type peptidase activity ; GO:0008236
Pfam:PF00326 Peptidase_S9 > GO:proteolysis ; GO:0006508
Pfam:PF00328 His_Phos_2 > GO:acid phosphatase activity ; GO:0003993
Pfam:PF00329 Complex1_30kDa > GO:NADH dehydrogenase (ubiquinone) activity ; GO:0008137
Pfam:PF00329 Complex1_30kDa > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00330 Aconitase > GO:metabolic process ; GO:0008152
Pfam:PF00331 Glyco_hydro_10 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF00331 Glyco_hydro_10 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00332 Glyco_hydro_17 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF00332 Glyco_hydro_17 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00333 Ribosomal_S5 > GO:RNA binding ; GO:0003723
Pfam:PF00333 Ribosomal_S5 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00333 Ribosomal_S5 > GO:translation ; GO:0006412
Pfam:PF00333 Ribosomal_S5 > GO:ribosome ; GO:0005840
Pfam:PF00334 NDK > GO:nucleoside diphosphate kinase activity ; GO:0004550
Pfam:PF00334 NDK > GO:ATP binding ; GO:0005524
Pfam:PF00334 NDK > GO:nucleoside diphosphate phosphorylation ; GO:0006165
Pfam:PF00334 NDK > GO:GTP biosynthetic process ; GO:0006183
Pfam:PF00334 NDK > GO:UTP biosynthetic process ; GO:0006228
Pfam:PF00334 NDK > GO:CTP biosynthetic process ; GO:0006241
Pfam:PF00335 Tetraspannin > GO:integral component of membrane ; GO:0016021
Pfam:PF00336 DNA_pol_viral_C > GO:RNA-DNA hybrid ribonuclease activity ; GO:0004523
Pfam:PF00337 Gal-bind_lectin > GO:carbohydrate binding ; GO:0030246
Pfam:PF00340 IL1 > GO:extracellular space ; GO:0005615
Pfam:PF00341 PDGF > GO:growth factor activity ; GO:0008083
Pfam:PF00341 PDGF > GO:membrane ; GO:0016020
Pfam:PF00342 PGI > GO:glucose-6-phosphate isomerase activity ; GO:0004347
Pfam:PF00342 PGI > GO:gluconeogenesis ; GO:0006094
Pfam:PF00342 PGI > GO:glycolytic process ; GO:0006096
Pfam:PF00343 Phosphorylase > GO:glycogen phosphorylase activity ; GO:0008184
Pfam:PF00343 Phosphorylase > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00344 SecY > GO:protein transport ; GO:0015031
Pfam:PF00344 SecY > GO:membrane ; GO:0016020
Pfam:PF00345 PapD_N > GO:cell wall organization ; GO:0071555
Pfam:PF00345 PapD_N > GO:outer membrane-bounded periplasmic space ; GO:0030288
Pfam:PF00346 Complex1_49kDa > GO:oxidoreductase activity, acting on NAD(P)H ; GO:0016651
Pfam:PF00346 Complex1_49kDa > GO:quinone binding ; GO:0048038
Pfam:PF00346 Complex1_49kDa > GO:NAD binding ; GO:0051287
Pfam:PF00346 Complex1_49kDa > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00347 Ribosomal_L6 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00347 Ribosomal_L6 > GO:rRNA binding ; GO:0019843
Pfam:PF00347 Ribosomal_L6 > GO:translation ; GO:0006412
Pfam:PF00347 Ribosomal_L6 > GO:ribosome ; GO:0005840
Pfam:PF00348 polyprenyl_synt > GO:isoprenoid biosynthetic process ; GO:0008299
Pfam:PF00349 Hexokinase_1 > GO:ATP binding ; GO:0005524
Pfam:PF00349 Hexokinase_1 > GO:phosphotransferase activity, alcohol group as acceptor ; GO:0016773
Pfam:PF00349 Hexokinase_1 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00350 Dynamin_N > GO:GTPase activity ; GO:0003924
Pfam:PF00350 Dynamin_N > GO:GTP binding ; GO:0005525
Pfam:PF00351 Biopterin_H > GO:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen ; GO:0016714
Pfam:PF00351 Biopterin_H > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00352 TBP > GO:DNA binding ; GO:0003677
Pfam:PF00352 TBP > GO:DNA-templated transcription, initiation ; GO:0006352
Pfam:PF00353 HemolysinCabind > GO:calcium ion binding ; GO:0005509
Pfam:PF00355 Rieske > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00355 Rieske > GO:2 iron, 2 sulfur cluster binding ; GO:0051537
Pfam:PF00355 Rieske > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00356 LacI > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00356 LacI > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00358 PTS_EIIA_1 > GO:phosphoenolpyruvate-dependent sugar phosphotransferase system ; GO:0009401
Pfam:PF00360 PHY > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00360 PHY > GO:detection of visible light ; GO:0009584
Pfam:PF00360 PHY > GO:protein-chromophore linkage ; GO:0018298
Pfam:PF00361 Oxidored_q1 > GO:NADH dehydrogenase (ubiquinone) activity ; GO:0008137
Pfam:PF00361 Oxidored_q1 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00363 Casein > GO:transporter activity ; GO:0005215
Pfam:PF00363 Casein > GO:transport ; GO:0006810
Pfam:PF00363 Casein > GO:extracellular region ; GO:0005576
Pfam:PF00365 PFK > GO:6-phosphofructokinase activity ; GO:0003872
Pfam:PF00365 PFK > GO:glycolytic process ; GO:0006096
Pfam:PF00366 Ribosomal_S17 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00366 Ribosomal_S17 > GO:translation ; GO:0006412
Pfam:PF00366 Ribosomal_S17 > GO:intracellular ; GO:0005622
Pfam:PF00366 Ribosomal_S17 > GO:ribosome ; GO:0005840
Pfam:PF00367 PTS_EIIB > GO:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity ; GO:0008982
Pfam:PF00368 HMG-CoA_red > GO:hydroxymethylglutaryl-CoA reductase (NADPH) activity ; GO:0004420
Pfam:PF00368 HMG-CoA_red > GO:coenzyme binding ; GO:0050662
Pfam:PF00368 HMG-CoA_red > GO:coenzyme A metabolic process ; GO:0015936
Pfam:PF00368 HMG-CoA_red > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00370 FGGY_N > GO:phosphotransferase activity, alcohol group as acceptor ; GO:0016773
Pfam:PF00370 FGGY_N > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00374 NiFeSe_Hases > GO:nickel cation binding ; GO:0016151
Pfam:PF00375 SDF > GO:sodium:dicarboxylate symporter activity ; GO:0017153
Pfam:PF00375 SDF > GO:dicarboxylic acid transport ; GO:0006835
Pfam:PF00375 SDF > GO:membrane ; GO:0016020
Pfam:PF00376 MerR > GO:DNA binding ; GO:0003677
Pfam:PF00376 MerR > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00377 Prion > GO:protein homooligomerization ; GO:0051260
Pfam:PF00377 Prion > GO:membrane ; GO:0016020
Pfam:PF00378 ECH > GO:catalytic activity ; GO:0003824
Pfam:PF00378 ECH > GO:metabolic process ; GO:0008152
Pfam:PF00379 Chitin_bind_4 > GO:structural constituent of cuticle ; GO:0042302
Pfam:PF00380 Ribosomal_S9 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00380 Ribosomal_S9 > GO:translation ; GO:0006412
Pfam:PF00380 Ribosomal_S9 > GO:ribosome ; GO:0005840
Pfam:PF00382 TFIIB > GO:TBP-class protein binding ; GO:0017025
Pfam:PF00383 dCMP_cyt_deam_1 > GO:zinc ion binding ; GO:0008270
Pfam:PF00383 dCMP_cyt_deam_1 > GO:hydrolase activity ; GO:0016787
Pfam:PF00384 Molybdopterin > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00384 Molybdopterin > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00387 PI-PLC-Y > GO:phosphatidylinositol phospholipase C activity ; GO:0004435
Pfam:PF00387 PI-PLC-Y > GO:lipid metabolic process ; GO:0006629
Pfam:PF00387 PI-PLC-Y > GO:signal transduction ; GO:0007165
Pfam:PF00387 PI-PLC-Y > GO:intracellular signal transduction ; GO:0035556
Pfam:PF00389 2-Hacid_dh > GO:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ; GO:0016616
Pfam:PF00389 2-Hacid_dh > GO:NAD binding ; GO:0051287
Pfam:PF00389 2-Hacid_dh > GO:metabolic process ; GO:0008152
Pfam:PF00389 2-Hacid_dh > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00390 malic > GO:malate dehydrogenase (decarboxylating) (NAD+) activity ; GO:0004471
Pfam:PF00390 malic > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00391 PEP-utilizers > GO:transferase activity, transferring phosphorus-containing groups ; GO:0016772
Pfam:PF00391 PEP-utilizers > GO:phosphorylation ; GO:0016310
Pfam:PF00392 GntR > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00392 GntR > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00393 6PGD > GO:phosphogluconate dehydrogenase (decarboxylating) activity ; GO:0004616
Pfam:PF00393 6PGD > GO:NADP binding ; GO:0050661
Pfam:PF00393 6PGD > GO:pentose-phosphate shunt ; GO:0006098
Pfam:PF00393 6PGD > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00394 Cu-oxidase > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00394 Cu-oxidase > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00397 WW > GO:protein binding ; GO:0005515
Pfam:PF00398 RrnaAD > GO:rRNA (adenine-N6,N6-)-dimethyltransferase activity ; GO:0000179
Pfam:PF00398 RrnaAD > GO:rRNA methyltransferase activity ; GO:0008649
Pfam:PF00398 RrnaAD > GO:rRNA modification ; GO:0000154
Pfam:PF00399 PIR > GO:structural constituent of cell wall ; GO:0005199
Pfam:PF00399 PIR > GO:cell wall ; GO:0005618
Pfam:PF00400 WD40 > GO:protein binding ; GO:0005515
Pfam:PF00403 HMA > GO:metal ion binding ; GO:0046872
Pfam:PF00403 HMA > GO:metal ion transport ; GO:0030001
Pfam:PF00404 Dockerin_1 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF00404 Dockerin_1 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00407 Bet_v_1 > GO:defense response ; GO:0006952
Pfam:PF00407 Bet_v_1 > GO:response to biotic stimulus ; GO:0009607
Pfam:PF00408 PGM_PMM_IV > GO:intramolecular transferase activity, phosphotransferases ; GO:0016868
Pfam:PF00408 PGM_PMM_IV > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00410 Ribosomal_S8 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00410 Ribosomal_S8 > GO:translation ; GO:0006412
Pfam:PF00410 Ribosomal_S8 > GO:ribosome ; GO:0005840
Pfam:PF00411 Ribosomal_S11 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00411 Ribosomal_S11 > GO:translation ; GO:0006412
Pfam:PF00411 Ribosomal_S11 > GO:ribosome ; GO:0005840
Pfam:PF00412 LIM > GO:zinc ion binding ; GO:0008270
Pfam:PF00413 Peptidase_M10 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF00413 Peptidase_M10 > GO:zinc ion binding ; GO:0008270
Pfam:PF00413 Peptidase_M10 > GO:proteolysis ; GO:0006508
Pfam:PF00413 Peptidase_M10 > GO:extracellular matrix ; GO:0031012
Pfam:PF00416 Ribosomal_S13 > GO:RNA binding ; GO:0003723
Pfam:PF00416 Ribosomal_S13 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00416 Ribosomal_S13 > GO:translation ; GO:0006412
Pfam:PF00416 Ribosomal_S13 > GO:intracellular ; GO:0005622
Pfam:PF00416 Ribosomal_S13 > GO:ribosome ; GO:0005840
Pfam:PF00418 Tubulin-binding > GO:tubulin binding ; GO:0015631
Pfam:PF00419 Fimbrial > GO:cell adhesion ; GO:0007155
Pfam:PF00419 Fimbrial > GO:pilus ; GO:0009289
Pfam:PF00420 Oxidored_q2 > GO:oxidoreductase activity, acting on NAD(P)H ; GO:0016651
Pfam:PF00420 Oxidored_q2 > GO:ATP synthesis coupled electron transport ; GO:0042773
Pfam:PF00420 Oxidored_q2 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00421 PSII > GO:chlorophyll binding ; GO:0016168
Pfam:PF00421 PSII > GO:photosynthetic electron transport chain ; GO:0009767
Pfam:PF00421 PSII > GO:photosynthesis, light reaction ; GO:0019684
Pfam:PF00421 PSII > GO:photosystem ; GO:0009521
Pfam:PF00421 PSII > GO:membrane ; GO:0016020
Pfam:PF00423 HN > GO:exo-alpha-sialidase activity ; GO:0004308
Pfam:PF00423 HN > GO:host cell surface receptor binding ; GO:0046789
Pfam:PF00423 HN > GO:viral life cycle ; GO:0019058
Pfam:PF00423 HN > GO:viral envelope ; GO:0019031
Pfam:PF00424 REV > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00424 REV > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00424 REV > GO:host cell nucleus ; GO:0042025
Pfam:PF00426 VP4_haemagglut > GO:viral life cycle ; GO:0019058
Pfam:PF00426 VP4_haemagglut > GO:viral capsid ; GO:0019028
Pfam:PF00427 PBS_linker_poly > GO:photosynthesis ; GO:0015979
Pfam:PF00427 PBS_linker_poly > GO:phycobilisome ; GO:0030089
Pfam:PF00428 Ribosomal_60s > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00428 Ribosomal_60s > GO:translational elongation ; GO:0006414
Pfam:PF00428 Ribosomal_60s > GO:intracellular ; GO:0005622
Pfam:PF00428 Ribosomal_60s > GO:ribosome ; GO:0005840
Pfam:PF00430 ATP-synt_B > GO:hydrogen ion transmembrane transporter activity ; GO:0015078
Pfam:PF00430 ATP-synt_B > GO:ATP synthesis coupled proton transport ; GO:0015986
Pfam:PF00430 ATP-synt_B > GO:proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0045263
Pfam:PF00432 Prenyltrans > GO:catalytic activity ; GO:0003824
Pfam:PF00433 Pkinase_C > GO:protein serine/threonine kinase activity ; GO:0004674
Pfam:PF00433 Pkinase_C > GO:ATP binding ; GO:0005524
Pfam:PF00433 Pkinase_C > GO:protein phosphorylation ; GO:0006468
Pfam:PF00434 VP7 > GO:viral capsid ; GO:0019028
Pfam:PF00435 Spectrin > GO:protein binding ; GO:0005515
Pfam:PF00436 SSB > GO:single-stranded DNA binding ; GO:0003697
Pfam:PF00437 T2SE > GO:ATP binding ; GO:0005524
Pfam:PF00437 T2SE > GO:transport ; GO:0006810
Pfam:PF00438 S-AdoMet_synt_N > GO:methionine adenosyltransferase activity ; GO:0004478
Pfam:PF00438 S-AdoMet_synt_N > GO:S-adenosylmethionine biosynthetic process ; GO:0006556
Pfam:PF00439 Bromodomain > GO:protein binding ; GO:0005515
Pfam:PF00440 TetR_N > GO:DNA binding ; GO:0003677
Pfam:PF00441 Acyl-CoA_dh_1 > GO:oxidoreductase activity, acting on the CH-CH group of donors ; GO:0016627
Pfam:PF00441 Acyl-CoA_dh_1 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00443 UCH > GO:ubiquitinyl hydrolase activity ; GO:0036459
Pfam:PF00443 UCH > GO:ubiquitin-dependent protein catabolic process ; GO:0006511
Pfam:PF00444 Ribosomal_L36 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00444 Ribosomal_L36 > GO:translation ; GO:0006412
Pfam:PF00444 Ribosomal_L36 > GO:intracellular ; GO:0005622
Pfam:PF00444 Ribosomal_L36 > GO:ribosome ; GO:0005840
Pfam:PF00445 Ribonuclease_T2 > GO:RNA binding ; GO:0003723
Pfam:PF00445 Ribonuclease_T2 > GO:ribonuclease T2 activity ; GO:0033897
Pfam:PF00446 GnRH > GO:hormone activity ; GO:0005179
Pfam:PF00446 GnRH > GO:multicellular organismal development ; GO:0007275
Pfam:PF00446 GnRH > GO:extracellular region ; GO:0005576
Pfam:PF00447 HSF_DNA-bind > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00447 HSF_DNA-bind > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF00447 HSF_DNA-bind > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00447 HSF_DNA-bind > GO:nucleus ; GO:0005634
Pfam:PF00448 SRP54 > GO:GTP binding ; GO:0005525
Pfam:PF00448 SRP54 > GO:SRP-dependent cotranslational protein targeting to membrane ; GO:0006614
Pfam:PF00450 Peptidase_S10 > GO:serine-type carboxypeptidase activity ; GO:0004185
Pfam:PF00450 Peptidase_S10 > GO:proteolysis ; GO:0006508
Pfam:PF00451 Toxin_2 > GO:ion channel inhibitor activity ; GO:0008200
Pfam:PF00451 Toxin_2 > GO:pathogenesis ; GO:0009405
Pfam:PF00451 Toxin_2 > GO:extracellular region ; GO:0005576
Pfam:PF00452 Bcl-2 > GO:regulation of apoptotic process ; GO:0042981
Pfam:PF00453 Ribosomal_L20 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00453 Ribosomal_L20 > GO:rRNA binding ; GO:0019843
Pfam:PF00453 Ribosomal_L20 > GO:translation ; GO:0006412
Pfam:PF00453 Ribosomal_L20 > GO:intracellular ; GO:0005622
Pfam:PF00453 Ribosomal_L20 > GO:ribosome ; GO:0005840
Pfam:PF00454 PI3_PI4_kinase > GO:phosphotransferase activity, alcohol group as acceptor ; GO:0016773
Pfam:PF00457 Glyco_hydro_11 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF00457 Glyco_hydro_11 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00458 WHEP-TRS > GO:aminoacyl-tRNA ligase activity ; GO:0004812
Pfam:PF00458 WHEP-TRS > GO:ATP binding ; GO:0005524
Pfam:PF00458 WHEP-TRS > GO:tRNA aminoacylation for protein translation ; GO:0006418
Pfam:PF00459 Inositol_P > GO:phosphatidylinositol phosphorylation ; GO:0046854
Pfam:PF00460 Flg_bb_rod > GO:bacterial-type flagellum-dependent cell motility ; GO:0071973
Pfam:PF00462 Glutaredoxin > GO:electron carrier activity ; GO:0009055
Pfam:PF00462 Glutaredoxin > GO:protein disulfide oxidoreductase activity ; GO:0015035
Pfam:PF00462 Glutaredoxin > GO:cell redox homeostasis ; GO:0045454
Pfam:PF00463 ICL > GO:isocitrate lyase activity ; GO:0004451
Pfam:PF00463 ICL > GO:carboxylic acid metabolic process ; GO:0019752
Pfam:PF00464 SHMT > GO:glycine hydroxymethyltransferase activity ; GO:0004372
Pfam:PF00464 SHMT > GO:glycine metabolic process ; GO:0006544
Pfam:PF00464 SHMT > GO:L-serine metabolic process ; GO:0006563
Pfam:PF00465 Fe-ADH > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00465 Fe-ADH > GO:metal ion binding ; GO:0046872
Pfam:PF00465 Fe-ADH > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00466 Ribosomal_L10 > GO:ribosome biogenesis ; GO:0042254
Pfam:PF00466 Ribosomal_L10 > GO:intracellular ; GO:0005622
Pfam:PF00468 Ribosomal_L34 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00468 Ribosomal_L34 > GO:translation ; GO:0006412
Pfam:PF00468 Ribosomal_L34 > GO:intracellular ; GO:0005622
Pfam:PF00468 Ribosomal_L34 > GO:ribosome ; GO:0005840
Pfam:PF00469 F-protein > GO:GTP binding ; GO:0005525
Pfam:PF00471 Ribosomal_L33 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00471 Ribosomal_L33 > GO:translation ; GO:0006412
Pfam:PF00471 Ribosomal_L33 > GO:intracellular ; GO:0005622
Pfam:PF00471 Ribosomal_L33 > GO:ribosome ; GO:0005840
Pfam:PF00472 RF-1 > GO:translation release factor activity ; GO:0003747
Pfam:PF00472 RF-1 > GO:translational termination ; GO:0006415
Pfam:PF00473 CRF > GO:hormone activity ; GO:0005179
Pfam:PF00473 CRF > GO:extracellular region ; GO:0005576
Pfam:PF00474 SSF > GO:transporter activity ; GO:0005215
Pfam:PF00474 SSF > GO:transport ; GO:0006810
Pfam:PF00474 SSF > GO:transmembrane transport ; GO:0055085
Pfam:PF00474 SSF > GO:membrane ; GO:0016020
Pfam:PF00475 IGPD > GO:imidazoleglycerol-phosphate dehydratase activity ; GO:0004424
Pfam:PF00475 IGPD > GO:histidine biosynthetic process ; GO:0000105
Pfam:PF00476 DNA_pol_A > GO:DNA binding ; GO:0003677
Pfam:PF00476 DNA_pol_A > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF00476 DNA_pol_A > GO:DNA replication ; GO:0006260
Pfam:PF00478 IMPDH > GO:catalytic activity ; GO:0003824
Pfam:PF00478 IMPDH > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00479 G6PD_N > GO:glucose-6-phosphate dehydrogenase activity ; GO:0004345
Pfam:PF00479 G6PD_N > GO:NADP binding ; GO:0050661
Pfam:PF00479 G6PD_N > GO:glucose metabolic process ; GO:0006006
Pfam:PF00479 G6PD_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00481 PP2C > GO:catalytic activity ; GO:0003824
Pfam:PF00483 NTP_transferase > GO:nucleotidyltransferase activity ; GO:0016779
Pfam:PF00483 NTP_transferase > GO:biosynthetic process ; GO:0009058
Pfam:PF00484 Pro_CA > GO:carbonate dehydratase activity ; GO:0004089
Pfam:PF00484 Pro_CA > GO:zinc ion binding ; GO:0008270
Pfam:PF00485 PRK > GO:ATP binding ; GO:0005524
Pfam:PF00485 PRK > GO:kinase activity ; GO:0016301
Pfam:PF00485 PRK > GO:metabolic process ; GO:0008152
Pfam:PF00486 Trans_reg_C > GO:DNA binding ; GO:0003677
Pfam:PF00486 Trans_reg_C > GO:phosphorelay signal transduction system ; GO:0000160
Pfam:PF00486 Trans_reg_C > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00487 FA_desaturase > GO:lipid metabolic process ; GO:0006629
Pfam:PF00488 MutS_V > GO:ATP binding ; GO:0005524
Pfam:PF00488 MutS_V > GO:mismatched DNA binding ; GO:0030983
Pfam:PF00488 MutS_V > GO:mismatch repair ; GO:0006298
Pfam:PF00489 IL6 > GO:cytokine activity ; GO:0005125
Pfam:PF00489 IL6 > GO:immune response ; GO:0006955
Pfam:PF00489 IL6 > GO:extracellular region ; GO:0005576
Pfam:PF00490 ALAD > GO:porphobilinogen synthase activity ; GO:0004655
Pfam:PF00490 ALAD > GO:metal ion binding ; GO:0046872
Pfam:PF00490 ALAD > GO:tetrapyrrole biosynthetic process ; GO:0033014
Pfam:PF00491 Arginase > GO:metal ion binding ; GO:0046872
Pfam:PF00493 MCM > GO:DNA binding ; GO:0003677
Pfam:PF00493 MCM > GO:ATP binding ; GO:0005524
Pfam:PF00493 MCM > GO:DNA replication ; GO:0006260
Pfam:PF00494 SQS_PSY > GO:transferase activity ; GO:0016740
Pfam:PF00494 SQS_PSY > GO:biosynthetic process ; GO:0009058
Pfam:PF00496 SBP_bac_5 > GO:transporter activity ; GO:0005215
Pfam:PF00496 SBP_bac_5 > GO:transport ; GO:0006810
Pfam:PF00497 SBP_bac_3 > GO:transporter activity ; GO:0005215
Pfam:PF00497 SBP_bac_3 > GO:transport ; GO:0006810
Pfam:PF00498 FHA > GO:protein binding ; GO:0005515
Pfam:PF00499 Oxidored_q3 > GO:NADH dehydrogenase (ubiquinone) activity ; GO:0008137
Pfam:PF00499 Oxidored_q3 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00500 Late_protein_L1 > GO:structural molecule activity ; GO:0005198
Pfam:PF00500 Late_protein_L1 > GO:viral capsid ; GO:0019028
Pfam:PF00501 AMP-binding > GO:catalytic activity ; GO:0003824
Pfam:PF00501 AMP-binding > GO:metabolic process ; GO:0008152
Pfam:PF00502 Phycobilisome > GO:photosynthesis ; GO:0015979
Pfam:PF00502 Phycobilisome > GO:phycobilisome ; GO:0030089
Pfam:PF00503 G-alpha > GO:GTPase activity ; GO:0003924
Pfam:PF00503 G-alpha > GO:signal transducer activity ; GO:0004871
Pfam:PF00503 G-alpha > GO:guanyl nucleotide binding ; GO:0019001
Pfam:PF00503 G-alpha > GO:G-protein beta/gamma-subunit complex binding ; GO:0031683
Pfam:PF00503 G-alpha > GO:G-protein coupled receptor signaling pathway ; GO:0007186
Pfam:PF00506 Flu_NP > GO:structural molecule activity ; GO:0005198
Pfam:PF00507 Oxidored_q4 > GO:NADH dehydrogenase (ubiquinone) activity ; GO:0008137
Pfam:PF00507 Oxidored_q4 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00508 PPV_E2_N > GO:regulation of DNA replication ; GO:0006275
Pfam:PF00508 PPV_E2_N > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00508 PPV_E2_N > GO:viral process ; GO:0016032
Pfam:PF00509 Hemagglutinin > GO:host cell surface receptor binding ; GO:0046789
Pfam:PF00509 Hemagglutinin > GO:fusion of virus membrane with host plasma membrane ; GO:0019064
Pfam:PF00509 Hemagglutinin > GO:viral envelope ; GO:0019031
Pfam:PF00510 COX3 > GO:heme-copper terminal oxidase activity ; GO:0015002
Pfam:PF00510 COX3 > GO:membrane ; GO:0016020
Pfam:PF00511 PPV_E2_C > GO:DNA binding ; GO:0003677
Pfam:PF00511 PPV_E2_C > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00511 PPV_E2_C > GO:regulation of DNA replication ; GO:0006275
Pfam:PF00511 PPV_E2_C > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00511 PPV_E2_C > GO:host cell nucleus ; GO:0042025
Pfam:PF00512 HisKA > GO:phosphorelay sensor kinase activity ; GO:0000155
Pfam:PF00512 HisKA > GO:signal transduction ; GO:0007165
Pfam:PF00512 HisKA > GO:membrane ; GO:0016020
Pfam:PF00513 Late_protein_L2 > GO:structural molecule activity ; GO:0005198
Pfam:PF00513 Late_protein_L2 > GO:viral capsid ; GO:0019028
Pfam:PF00514 Arm > GO:protein binding ; GO:0005515
Pfam:PF00515 TPR_1 > GO:protein binding ; GO:0005515
Pfam:PF00516 GP120 > GO:viral envelope ; GO:0019031
Pfam:PF00517 GP41 > GO:structural molecule activity ; GO:0005198
Pfam:PF00517 GP41 > GO:viral envelope ; GO:0019031
Pfam:PF00518 E6 > GO:DNA binding ; GO:0003677
Pfam:PF00518 E6 > GO:host cell nucleus ; GO:0042025
Pfam:PF00519 PPV_E1_C > GO:DNA binding ; GO:0003677
Pfam:PF00519 PPV_E1_C > GO:ATP-dependent DNA helicase activity ; GO:0004003
Pfam:PF00519 PPV_E1_C > GO:ATP binding ; GO:0005524
Pfam:PF00519 PPV_E1_C > GO:DNA replication ; GO:0006260
Pfam:PF00520 Ion_trans > GO:ion channel activity ; GO:0005216
Pfam:PF00520 Ion_trans > GO:ion transport ; GO:0006811
Pfam:PF00520 Ion_trans > GO:transmembrane transport ; GO:0055085
Pfam:PF00520 Ion_trans > GO:membrane ; GO:0016020
Pfam:PF00521 DNA_topoisoIV > GO:DNA binding ; GO:0003677
Pfam:PF00521 DNA_topoisoIV > GO:DNA topoisomerase type II (ATP-hydrolyzing) activity ; GO:0003918
Pfam:PF00521 DNA_topoisoIV > GO:ATP binding ; GO:0005524
Pfam:PF00521 DNA_topoisoIV > GO:DNA topological change ; GO:0006265
Pfam:PF00522 VPR > GO:viral life cycle ; GO:0019058
Pfam:PF00522 VPR > GO:host cell nucleus ; GO:0042025
Pfam:PF00523 Fusion_gly > GO:induction by virus of host cell-cell fusion ; GO:0006948
Pfam:PF00524 PPV_E1_N > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF00525 Crystallin > GO:structural constituent of eye lens ; GO:0005212
Pfam:PF00527 E7 > GO:DNA binding ; GO:0003677
Pfam:PF00527 E7 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00527 E7 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00528 BPD_transp_1 > GO:transport ; GO:0006810
Pfam:PF00528 BPD_transp_1 > GO:membrane ; GO:0016020
Pfam:PF00529 HlyD > GO:transmembrane transport ; GO:0055085
Pfam:PF00529 HlyD > GO:membrane ; GO:0016020
Pfam:PF00530 SRCR > GO:scavenger receptor activity ; GO:0005044
Pfam:PF00530 SRCR > GO:membrane ; GO:0016020
Pfam:PF00531 Death > GO:protein binding ; GO:0005515
Pfam:PF00531 Death > GO:signal transduction ; GO:0007165
Pfam:PF00534 Glycos_transf_1 > GO:biosynthetic process ; GO:0009058
Pfam:PF00537 Toxin_3 > GO:ion channel inhibitor activity ; GO:0008200
Pfam:PF00537 Toxin_3 > GO:extracellular region ; GO:0005576
Pfam:PF00538 Linker_histone > GO:DNA binding ; GO:0003677
Pfam:PF00538 Linker_histone > GO:nucleosome assembly ; GO:0006334
Pfam:PF00538 Linker_histone > GO:nucleosome ; GO:0000786
Pfam:PF00538 Linker_histone > GO:nucleus ; GO:0005634
Pfam:PF00539 Tat > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00539 Tat > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00539 Tat > GO:host cell nucleus ; GO:0042025
Pfam:PF00540 Gag_p17 > GO:structural molecule activity ; GO:0005198
Pfam:PF00541 Adeno_knob > GO:virion attachment to host cell ; GO:0019062
Pfam:PF00541 Adeno_knob > GO:viral capsid ; GO:0019028
Pfam:PF00542 Ribosomal_L12 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00542 Ribosomal_L12 > GO:translation ; GO:0006412
Pfam:PF00542 Ribosomal_L12 > GO:intracellular ; GO:0005622
Pfam:PF00542 Ribosomal_L12 > GO:ribosome ; GO:0005840
Pfam:PF00543 P-II > GO:enzyme regulator activity ; GO:0030234
Pfam:PF00543 P-II > GO:regulation of nitrogen utilization ; GO:0006808
Pfam:PF00545 Ribonuclease > GO:RNA binding ; GO:0003723
Pfam:PF00545 Ribonuclease > GO:endoribonuclease activity ; GO:0004521
Pfam:PF00547 Urease_gamma > GO:nickel cation binding ; GO:0016151
Pfam:PF00547 Urease_gamma > GO:urea catabolic process ; GO:0043419
Pfam:PF00548 Peptidase_C3 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF00548 Peptidase_C3 > GO:proteolysis ; GO:0006508
Pfam:PF00549 Ligase_CoA > GO:catalytic activity ; GO:0003824
Pfam:PF00549 Ligase_CoA > GO:metabolic process ; GO:0008152
Pfam:PF00551 Formyl_trans_N > GO:hydroxymethyl-, formyl- and related transferase activity ; GO:0016742
Pfam:PF00551 Formyl_trans_N > GO:biosynthetic process ; GO:0009058
Pfam:PF00552 IN_DBD_C > GO:nucleic acid binding ; GO:0003676
Pfam:PF00553 CBM_2 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF00553 CBM_2 > GO:carbohydrate binding ; GO:0030246
Pfam:PF00553 CBM_2 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00554 RHD > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00554 RHD > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00554 RHD > GO:nucleus ; GO:0005634
Pfam:PF00556 LHC > GO:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ; GO:0045156
Pfam:PF00556 LHC > GO:photosynthesis, light reaction ; GO:0019684
Pfam:PF00556 LHC > GO:integral component of membrane ; GO:0016021
Pfam:PF00556 LHC > GO:plasma membrane light-harvesting complex ; GO:0030077
Pfam:PF00558 Vpu > GO:cation channel activity ; GO:0005261
Pfam:PF00558 Vpu > GO:viral release from host cell ; GO:0019076
Pfam:PF00558 Vpu > GO:receptor catabolic process ; GO:0032801
Pfam:PF00558 Vpu > GO:host cell membrane ; GO:0033644
Pfam:PF00559 Vif > GO:viral life cycle ; GO:0019058
Pfam:PF00560 LRR_1 > GO:protein binding ; GO:0005515
Pfam:PF00562 RNA_pol_Rpb2_6 > GO:DNA binding ; GO:0003677
Pfam:PF00562 RNA_pol_Rpb2_6 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF00562 RNA_pol_Rpb2_6 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF00564 PB1 > GO:protein binding ; GO:0005515
Pfam:PF00565 SNase > GO:nucleic acid binding ; GO:0003676
Pfam:PF00565 SNase > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF00566 RabGAP-TBC > GO:Rab GTPase activator activity ; GO:0005097
Pfam:PF00566 RabGAP-TBC > GO:regulation of Rab GTPase activity ; GO:0032313
Pfam:PF00569 ZZ > GO:zinc ion binding ; GO:0008270
Pfam:PF00570 HRDC > GO:nucleic acid binding ; GO:0003676
Pfam:PF00570 HRDC > GO:intracellular ; GO:0005622
Pfam:PF00571 CBS > GO:adenyl nucleotide binding ; GO:0030554
Pfam:PF00572 Ribosomal_L13 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00572 Ribosomal_L13 > GO:translation ; GO:0006412
Pfam:PF00572 Ribosomal_L13 > GO:ribosome ; GO:0005840
Pfam:PF00573 Ribosomal_L4 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00573 Ribosomal_L4 > GO:translation ; GO:0006412
Pfam:PF00573 Ribosomal_L4 > GO:ribosome ; GO:0005840
Pfam:PF00575 S1 > GO:RNA binding ; GO:0003723
Pfam:PF00577 Usher > GO:transporter activity ; GO:0005215
Pfam:PF00577 Usher > GO:transport ; GO:0006810
Pfam:PF00577 Usher > GO:membrane ; GO:0016020
Pfam:PF00578 AhpC-TSA > GO:antioxidant activity ; GO:0016209
Pfam:PF00578 AhpC-TSA > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00578 AhpC-TSA > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00579 tRNA-synt_1b > GO:nucleotide binding ; GO:0000166
Pfam:PF00579 tRNA-synt_1b > GO:aminoacyl-tRNA ligase activity ; GO:0004812
Pfam:PF00579 tRNA-synt_1b > GO:ATP binding ; GO:0005524
Pfam:PF00579 tRNA-synt_1b > GO:tRNA aminoacylation for protein translation ; GO:0006418
Pfam:PF00580 UvrD-helicase > GO:ATP binding ; GO:0005524
Pfam:PF00582 Usp > GO:response to stress ; GO:0006950
Pfam:PF00583 Acetyltransf_1 > GO:N-acetyltransferase activity ; GO:0008080
Pfam:PF00584 SecE > GO:protein targeting ; GO:0006605
Pfam:PF00584 SecE > GO:intracellular protein transport ; GO:0006886
Pfam:PF00584 SecE > GO:membrane ; GO:0016020
Pfam:PF00586 AIRS > GO:catalytic activity ; GO:0003824
Pfam:PF00587 tRNA-synt_2b > GO:nucleotide binding ; GO:0000166
Pfam:PF00587 tRNA-synt_2b > GO:aminoacyl-tRNA ligase activity ; GO:0004812
Pfam:PF00587 tRNA-synt_2b > GO:ATP binding ; GO:0005524
Pfam:PF00587 tRNA-synt_2b > GO:tRNA aminoacylation for protein translation ; GO:0006418
Pfam:PF00588 SpoU_methylase > GO:RNA binding ; GO:0003723
Pfam:PF00588 SpoU_methylase > GO:RNA methyltransferase activity ; GO:0008173
Pfam:PF00588 SpoU_methylase > GO:RNA processing ; GO:0006396
Pfam:PF00589 Phage_integrase > GO:DNA binding ; GO:0003677
Pfam:PF00589 Phage_integrase > GO:DNA recombination ; GO:0006310
Pfam:PF00589 Phage_integrase > GO:DNA integration ; GO:0015074
Pfam:PF00590 TP_methylase > GO:methyltransferase activity ; GO:0008168
Pfam:PF00590 TP_methylase > GO:metabolic process ; GO:0008152
Pfam:PF00591 Glycos_transf_3 > GO:transferase activity, transferring glycosyl groups ; GO:0016757
Pfam:PF00591 Glycos_transf_3 > GO:metabolic process ; GO:0008152
Pfam:PF00593 TonB_dep_Rec > GO:receptor activity ; GO:0004872
Pfam:PF00593 TonB_dep_Rec > GO:transporter activity ; GO:0005215
Pfam:PF00593 TonB_dep_Rec > GO:transport ; GO:0006810
Pfam:PF00593 TonB_dep_Rec > GO:membrane ; GO:0016020
Pfam:PF00594 Gla > GO:calcium ion binding ; GO:0005509
Pfam:PF00594 Gla > GO:extracellular region ; GO:0005576
Pfam:PF00595 PDZ > GO:protein binding ; GO:0005515
Pfam:PF00598 Flu_M1 > GO:RNA binding ; GO:0003723
Pfam:PF00598 Flu_M1 > GO:structural molecule activity ; GO:0005198
Pfam:PF00599 Flu_M2 > GO:hydrogen ion transmembrane transporter activity ; GO:0015078
Pfam:PF00599 Flu_M2 > GO:proton transport ; GO:0015992
Pfam:PF00599 Flu_M2 > GO:host cell membrane ; GO:0033644
Pfam:PF00599 Flu_M2 > GO:virion membrane ; GO:0055036
Pfam:PF00600 Flu_NS1 > GO:RNA binding ; GO:0003723
Pfam:PF00601 Flu_NS2 > GO:RNA export from nucleus ; GO:0006405
Pfam:PF00601 Flu_NS2 > GO:host cell nucleus ; GO:0042025
Pfam:PF00602 Flu_PB1 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF00602 Flu_PB1 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF00603 Flu_PA > GO:RNA binding ; GO:0003723
Pfam:PF00603 Flu_PA > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF00603 Flu_PA > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF00604 Flu_PB2 > GO:RNA binding ; GO:0003723
Pfam:PF00604 Flu_PB2 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF00604 Flu_PB2 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF00605 IRF > GO:regulatory region DNA binding ; GO:0000975
Pfam:PF00606 Glycoprotein_B > GO:membrane ; GO:0016020
Pfam:PF00607 Gag_p24 > GO:viral process ; GO:0016032
Pfam:PF00608 Adeno_shaft > GO:cell adhesion ; GO:0007155
Pfam:PF00608 Adeno_shaft > GO:pathogenesis ; GO:0009405
Pfam:PF00608 Adeno_shaft > GO:virion attachment to host cell ; GO:0019062
Pfam:PF00609 DAGK_acc > GO:diacylglycerol kinase activity ; GO:0004143
Pfam:PF00609 DAGK_acc > GO:protein kinase C-activating G-protein coupled receptor signaling pathway ; GO:0007205
Pfam:PF00610 DEP > GO:intracellular signal transduction ; GO:0035556
Pfam:PF00612 IQ > GO:protein binding ; GO:0005515
Pfam:PF00614 PLDc > GO:catalytic activity ; GO:0003824
Pfam:PF00614 PLDc > GO:metabolic process ; GO:0008152
Pfam:PF00615 RGS > GO:termination of G-protein coupled receptor signaling pathway ; GO:0038032
Pfam:PF00616 RasGAP > GO:GTPase activator activity ; GO:0005096
Pfam:PF00616 RasGAP > GO:regulation of small GTPase mediated signal transduction ; GO:0051056
Pfam:PF00616 RasGAP > GO:intracellular ; GO:0005622
Pfam:PF00617 RasGEF > GO:guanyl-nucleotide exchange factor activity ; GO:0005085
Pfam:PF00617 RasGEF > GO:small GTPase mediated signal transduction ; GO:0007264
Pfam:PF00618 RasGEF_N > GO:guanyl-nucleotide exchange factor activity ; GO:0005085
Pfam:PF00618 RasGEF_N > GO:regulation of small GTPase mediated signal transduction ; GO:0051056
Pfam:PF00618 RasGEF_N > GO:intracellular ; GO:0005622
Pfam:PF00619 CARD > GO:regulation of apoptotic process ; GO:0042981
Pfam:PF00620 RhoGAP > GO:signal transduction ; GO:0007165
Pfam:PF00621 RhoGEF > GO:Rho guanyl-nucleotide exchange factor activity ; GO:0005089
Pfam:PF00621 RhoGEF > GO:regulation of Rho protein signal transduction ; GO:0035023
Pfam:PF00622 SPRY > GO:protein binding ; GO:0005515
Pfam:PF00623 RNA_pol_Rpb1_2 > GO:DNA binding ; GO:0003677
Pfam:PF00623 RNA_pol_Rpb1_2 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF00623 RNA_pol_Rpb1_2 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF00624 Flocculin > GO:flocculation ; GO:0000128
Pfam:PF00625 Guanylate_kin > GO:protein binding ; GO:0005515
Pfam:PF00627 UBA > GO:protein binding ; GO:0005515
Pfam:PF00628 PHD > GO:protein binding ; GO:0005515
Pfam:PF00629 MAM > GO:membrane ; GO:0016020
Pfam:PF00631 G-gamma > GO:signal transducer activity ; GO:0004871
Pfam:PF00631 G-gamma > GO:G-protein coupled receptor signaling pathway ; GO:0007186
Pfam:PF00631 G-gamma > GO:heterotrimeric G-protein complex ; GO:0005834
Pfam:PF00632 HECT > GO:ubiquitin-protein transferase activity ; GO:0004842
Pfam:PF00633 HHH > GO:DNA binding ; GO:0003677
Pfam:PF00634 BRCA2 > GO:protein binding ; GO:0005515
Pfam:PF00634 BRCA2 > GO:double-strand break repair ; GO:0006302
Pfam:PF00635 Motile_Sperm > GO:structural molecule activity ; GO:0005198
Pfam:PF00636 Ribonuclease_3 > GO:RNA binding ; GO:0003723
Pfam:PF00636 Ribonuclease_3 > GO:ribonuclease III activity ; GO:0004525
Pfam:PF00636 Ribonuclease_3 > GO:RNA processing ; GO:0006396
Pfam:PF00637 Clathrin > GO:intracellular protein transport ; GO:0006886
Pfam:PF00637 Clathrin > GO:vesicle-mediated transport ; GO:0016192
Pfam:PF00638 Ran_BP1 > GO:intracellular transport ; GO:0046907
Pfam:PF00639 Rotamase > GO:isomerase activity ; GO:0016853
Pfam:PF00640 PID > GO:protein binding ; GO:0005515
Pfam:PF00641 zf-RanBP > GO:zinc ion binding ; GO:0008270
Pfam:PF00642 zf-CCCH > GO:metal ion binding ; GO:0046872
Pfam:PF00643 zf-B_box > GO:zinc ion binding ; GO:0008270
Pfam:PF00643 zf-B_box > GO:intracellular ; GO:0005622
Pfam:PF00644 PARP > GO:NAD+ ADP-ribosyltransferase activity ; GO:0003950
Pfam:PF00645 zf-PARP > GO:DNA binding ; GO:0003677
Pfam:PF00645 zf-PARP > GO:zinc ion binding ; GO:0008270
Pfam:PF00646 F-box > GO:protein binding ; GO:0005515
Pfam:PF00647 EF1G > GO:translation elongation factor activity ; GO:0003746
Pfam:PF00647 EF1G > GO:translational elongation ; GO:0006414
Pfam:PF00648 Peptidase_C2 > GO:calcium-dependent cysteine-type endopeptidase activity ; GO:0004198
Pfam:PF00648 Peptidase_C2 > GO:proteolysis ; GO:0006508
Pfam:PF00648 Peptidase_C2 > GO:intracellular ; GO:0005622
Pfam:PF00649 Copper-fist > GO:DNA binding ; GO:0003677
Pfam:PF00649 Copper-fist > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00649 Copper-fist > GO:copper ion binding ; GO:0005507
Pfam:PF00649 Copper-fist > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00649 Copper-fist > GO:nucleus ; GO:0005634
Pfam:PF00651 BTB > GO:protein binding ; GO:0005515
Pfam:PF00654 Voltage_CLC > GO:voltage-gated chloride channel activity ; GO:0005247
Pfam:PF00654 Voltage_CLC > GO:chloride transport ; GO:0006821
Pfam:PF00654 Voltage_CLC > GO:transmembrane transport ; GO:0055085
Pfam:PF00654 Voltage_CLC > GO:membrane ; GO:0016020
Pfam:PF00656 Peptidase_C14 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF00656 Peptidase_C14 > GO:proteolysis ; GO:0006508
Pfam:PF00657 Lipase_GDSL > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF00657 Lipase_GDSL > GO:lipid metabolic process ; GO:0006629
Pfam:PF00658 PABP > GO:RNA binding ; GO:0003723
Pfam:PF00659 POLO_box > GO:protein binding ; GO:0005515
Pfam:PF00660 SRP1_TIP1 > GO:response to stress ; GO:0006950
Pfam:PF00661 Matrix > GO:structural molecule activity ; GO:0005198
Pfam:PF00661 Matrix > GO:virion assembly ; GO:0019068
Pfam:PF00662 Oxidored_q1_N > GO:NADH dehydrogenase (ubiquinone) activity ; GO:0008137
Pfam:PF00662 Oxidored_q1_N > GO:ATP synthesis coupled electron transport ; GO:0042773
Pfam:PF00662 Oxidored_q1_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00664 ABC_membrane > GO:ATP binding ; GO:0005524
Pfam:PF00664 ABC_membrane > GO:ATPase activity, coupled to transmembrane movement of substances ; GO:0042626
Pfam:PF00664 ABC_membrane > GO:transport ; GO:0006810
Pfam:PF00664 ABC_membrane > GO:transmembrane transport ; GO:0055085
Pfam:PF00664 ABC_membrane > GO:integral component of membrane ; GO:0016021
Pfam:PF00665 rve > GO:DNA integration ; GO:0015074
Pfam:PF00666 Cathelicidins > GO:defense response ; GO:0006952
Pfam:PF00666 Cathelicidins > GO:extracellular region ; GO:0005576
Pfam:PF00667 FAD_binding_1 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00667 FAD_binding_1 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00669 Flagellin_N > GO:structural molecule activity ; GO:0005198
Pfam:PF00669 Flagellin_N > GO:bacterial-type flagellum-dependent cell motility ; GO:0071973
Pfam:PF00669 Flagellin_N > GO:bacterial-type flagellum ; GO:0009288
Pfam:PF00672 HAMP > GO:signal transducer activity ; GO:0004871
Pfam:PF00672 HAMP > GO:signal transduction ; GO:0007165
Pfam:PF00672 HAMP > GO:integral component of membrane ; GO:0016021
Pfam:PF00673 Ribosomal_L5_C > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00673 Ribosomal_L5_C > GO:translation ; GO:0006412
Pfam:PF00673 Ribosomal_L5_C > GO:ribosome ; GO:0005840
Pfam:PF00676 E1_dh > GO:oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor ; GO:0016624
Pfam:PF00676 E1_dh > GO:metabolic process ; GO:0008152
Pfam:PF00680 RdRP_1 > GO:RNA binding ; GO:0003723
Pfam:PF00680 RdRP_1 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF00680 RdRP_1 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF00681 Plectin > GO:cytoskeleton ; GO:0005856
Pfam:PF00682 HMGL-like > GO:catalytic activity ; GO:0003824
Pfam:PF00684 DnaJ_CXXCXGXG > GO:heat shock protein binding ; GO:0031072
Pfam:PF00684 DnaJ_CXXCXGXG > GO:unfolded protein binding ; GO:0051082
Pfam:PF00685 Sulfotransfer_1 > GO:sulfotransferase activity ; GO:0008146
Pfam:PF00686 CBM_20 > GO:starch binding ; GO:2001070
Pfam:PF00688 TGFb_propeptide > GO:growth factor activity ; GO:0008083
Pfam:PF00688 TGFb_propeptide > GO:growth ; GO:0040007
Pfam:PF00692 dUTPase > GO:hydrolase activity ; GO:0016787
Pfam:PF00692 dUTPase > GO:dUTP metabolic process ; GO:0046080
Pfam:PF00693 Herpes_TK > GO:thymidine kinase activity ; GO:0004797
Pfam:PF00693 Herpes_TK > GO:ATP binding ; GO:0005524
Pfam:PF00693 Herpes_TK > GO:TMP biosynthetic process ; GO:0006230
Pfam:PF00694 Aconitase_C > GO:metabolic process ; GO:0008152
Pfam:PF00695 vMSA > GO:viral process ; GO:0016032
Pfam:PF00697 PRAI > GO:phosphoribosylanthranilate isomerase activity ; GO:0004640
Pfam:PF00697 PRAI > GO:tryptophan metabolic process ; GO:0006568
Pfam:PF00700 Flagellin_C > GO:structural molecule activity ; GO:0005198
Pfam:PF00700 Flagellin_C > GO:bacterial-type flagellum-dependent cell motility ; GO:0071973
Pfam:PF00700 Flagellin_C > GO:bacterial-type flagellum ; GO:0009288
Pfam:PF00701 DHDPS > GO:lyase activity ; GO:0016829
Pfam:PF00701 DHDPS > GO:metabolic process ; GO:0008152
Pfam:PF00703 Glyco_hydro_2 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF00703 Glyco_hydro_2 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00704 Glyco_hydro_18 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF00704 Glyco_hydro_18 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00705 PCNA_N > GO:DNA binding ; GO:0003677
Pfam:PF00705 PCNA_N > GO:regulation of DNA replication ; GO:0006275
Pfam:PF00706 Toxin_4 > GO:regulation of signal transduction ; GO:0009966
Pfam:PF00706 Toxin_4 > GO:extracellular region ; GO:0005576
Pfam:PF00707 IF3_C > GO:translational initiation ; GO:0006413
Pfam:PF00709 Adenylsucc_synt > GO:adenylosuccinate synthase activity ; GO:0004019
Pfam:PF00709 Adenylsucc_synt > GO:GTP binding ; GO:0005525
Pfam:PF00709 Adenylsucc_synt > GO:purine nucleotide biosynthetic process ; GO:0006164
Pfam:PF00710 Asparaginase > GO:cellular amino acid metabolic process ; GO:0006520
Pfam:PF00711 Defensin_beta > GO:defense response ; GO:0006952
Pfam:PF00711 Defensin_beta > GO:extracellular region ; GO:0005576
Pfam:PF00712 DNA_pol3_beta > GO:DNA binding ; GO:0003677
Pfam:PF00712 DNA_pol3_beta > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF00712 DNA_pol3_beta > GO:3'-5' exonuclease activity ; GO:0008408
Pfam:PF00712 DNA_pol3_beta > GO:DNA replication ; GO:0006260
Pfam:PF00712 DNA_pol3_beta > GO:DNA polymerase III complex ; GO:0009360
Pfam:PF00713 Hirudin > GO:serine-type endopeptidase inhibitor activity ; GO:0004867
Pfam:PF00714 IFN-gamma > GO:interferon-gamma receptor binding ; GO:0005133
Pfam:PF00714 IFN-gamma > GO:immune response ; GO:0006955
Pfam:PF00714 IFN-gamma > GO:extracellular region ; GO:0005576
Pfam:PF00715 IL2 > GO:interleukin-2 receptor binding ; GO:0005134
Pfam:PF00715 IL2 > GO:growth factor activity ; GO:0008083
Pfam:PF00715 IL2 > GO:immune response ; GO:0006955
Pfam:PF00715 IL2 > GO:extracellular region ; GO:0005576
Pfam:PF00716 Peptidase_S21 > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF00716 Peptidase_S21 > GO:proteolysis ; GO:0006508
Pfam:PF00718 Polyoma_coat > GO:structural molecule activity ; GO:0005198
Pfam:PF00718 Polyoma_coat > GO:viral capsid ; GO:0019028
Pfam:PF00719 Pyrophosphatase > GO:magnesium ion binding ; GO:0000287
Pfam:PF00719 Pyrophosphatase > GO:inorganic diphosphatase activity ; GO:0004427
Pfam:PF00719 Pyrophosphatase > GO:phosphate-containing compound metabolic process ; GO:0006796
Pfam:PF00719 Pyrophosphatase > GO:cytoplasm ; GO:0005737
Pfam:PF00720 SSI > GO:serine-type endopeptidase inhibitor activity ; GO:0004867
Pfam:PF00721 TMV_coat > GO:structural molecule activity ; GO:0005198
Pfam:PF00721 TMV_coat > GO:viral capsid ; GO:0019028
Pfam:PF00722 Glyco_hydro_16 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF00722 Glyco_hydro_16 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00723 Glyco_hydro_15 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF00723 Glyco_hydro_15 > GO:polysaccharide metabolic process ; GO:0005976
Pfam:PF00724 Oxidored_FMN > GO:FMN binding ; GO:0010181
Pfam:PF00724 Oxidored_FMN > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00724 Oxidored_FMN > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00725 3HCDH > GO:3-hydroxyacyl-CoA dehydrogenase activity ; GO:0003857
Pfam:PF00725 3HCDH > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00725 3HCDH > GO:fatty acid metabolic process ; GO:0006631
Pfam:PF00725 3HCDH > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00727 IL4 > GO:interleukin-4 receptor binding ; GO:0005136
Pfam:PF00727 IL4 > GO:growth factor activity ; GO:0008083
Pfam:PF00727 IL4 > GO:immune response ; GO:0006955
Pfam:PF00727 IL4 > GO:extracellular region ; GO:0005576
Pfam:PF00728 Glyco_hydro_20 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF00728 Glyco_hydro_20 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00729 Viral_coat > GO:structural molecule activity ; GO:0005198
Pfam:PF00729 Viral_coat > GO:viral capsid ; GO:0019028
Pfam:PF00730 HhH-GPD > GO:base-excision repair ; GO:0006284
Pfam:PF00731 AIRC > GO:'de novo' IMP biosynthetic process ; GO:0006189
Pfam:PF00732 GMC_oxred_N > GO:oxidoreductase activity, acting on CH-OH group of donors ; GO:0016614
Pfam:PF00732 GMC_oxred_N > GO:flavin adenine dinucleotide binding ; GO:0050660
Pfam:PF00732 GMC_oxred_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00733 Asn_synthase > GO:asparagine synthase (glutamine-hydrolyzing) activity ; GO:0004066
Pfam:PF00733 Asn_synthase > GO:asparagine biosynthetic process ; GO:0006529
Pfam:PF00734 CBM_1 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF00734 CBM_1 > GO:cellulose binding ; GO:0030248
Pfam:PF00734 CBM_1 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00734 CBM_1 > GO:extracellular region ; GO:0005576
Pfam:PF00735 Septin > GO:GTP binding ; GO:0005525
Pfam:PF00735 Septin > GO:cell cycle ; GO:0007049
Pfam:PF00736 EF1_GNE > GO:translation elongation factor activity ; GO:0003746
Pfam:PF00736 EF1_GNE > GO:translational elongation ; GO:0006414
Pfam:PF00736 EF1_GNE > GO:eukaryotic translation elongation factor 1 complex ; GO:0005853
Pfam:PF00737 PsbH > GO:phosphate ion binding ; GO:0042301
Pfam:PF00737 PsbH > GO:photosynthesis ; GO:0015979
Pfam:PF00737 PsbH > GO:protein stabilization ; GO:0050821
Pfam:PF00737 PsbH > GO:photosystem II ; GO:0009523
Pfam:PF00737 PsbH > GO:membrane ; GO:0016020
Pfam:PF00738 Polyhedrin > GO:structural molecule activity ; GO:0005198
Pfam:PF00739 X > GO:viral genome replication ; GO:0019079
Pfam:PF00740 Parvo_coat > GO:structural molecule activity ; GO:0005198
Pfam:PF00740 Parvo_coat > GO:viral capsid ; GO:0019028
Pfam:PF00741 Gas_vesicle > GO:structural molecule activity ; GO:0005198
Pfam:PF00741 Gas_vesicle > GO:vesicle membrane ; GO:0012506
Pfam:PF00742 Homoserine_dh > GO:cellular amino acid metabolic process ; GO:0006520
Pfam:PF00742 Homoserine_dh > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00743 FMO-like > GO:N,N-dimethylaniline monooxygenase activity ; GO:0004499
Pfam:PF00743 FMO-like > GO:flavin adenine dinucleotide binding ; GO:0050660
Pfam:PF00743 FMO-like > GO:NADP binding ; GO:0050661
Pfam:PF00743 FMO-like > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00745 GlutR_dimer > GO:glutamyl-tRNA reductase activity ; GO:0008883
Pfam:PF00745 GlutR_dimer > GO:NADP binding ; GO:0050661
Pfam:PF00745 GlutR_dimer > GO:tetrapyrrole biosynthetic process ; GO:0033014
Pfam:PF00745 GlutR_dimer > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00747 Viral_DNA_bp > GO:single-stranded DNA binding ; GO:0003697
Pfam:PF00747 Viral_DNA_bp > GO:DNA replication ; GO:0006260
Pfam:PF00747 Viral_DNA_bp > GO:host cell nucleus ; GO:0042025
Pfam:PF00749 tRNA-synt_1c > GO:ATP binding ; GO:0005524
Pfam:PF00749 tRNA-synt_1c > GO:ligase activity, forming aminoacyl-tRNA and related compounds ; GO:0016876
Pfam:PF00749 tRNA-synt_1c > GO:tRNA aminoacylation ; GO:0043039
Pfam:PF00750 tRNA-synt_1d > GO:arginine-tRNA ligase activity ; GO:0004814
Pfam:PF00750 tRNA-synt_1d > GO:ATP binding ; GO:0005524
Pfam:PF00750 tRNA-synt_1d > GO:arginyl-tRNA aminoacylation ; GO:0006420
Pfam:PF00751 DM > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF00751 DM > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00752 XPG_N > GO:nuclease activity ; GO:0004518
Pfam:PF00752 XPG_N > GO:DNA repair ; GO:0006281
Pfam:PF00754 F5_F8_type_C > GO:cell adhesion ; GO:0007155
Pfam:PF00755 Carn_acyltransf > GO:transferase activity, transferring acyl groups ; GO:0016746
Pfam:PF00757 Furin-like > GO:transmembrane receptor protein tyrosine kinase activity ; GO:0004714
Pfam:PF00757 Furin-like > GO:ATP binding ; GO:0005524
Pfam:PF00757 Furin-like > GO:protein phosphorylation ; GO:0006468
Pfam:PF00757 Furin-like > GO:transmembrane receptor protein tyrosine kinase signaling pathway ; GO:0007169
Pfam:PF00757 Furin-like > GO:membrane ; GO:0016020
Pfam:PF00758 EPO_TPO > GO:hormone activity ; GO:0005179
Pfam:PF00758 EPO_TPO > GO:extracellular region ; GO:0005576
Pfam:PF00759 Glyco_hydro_9 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF00759 Glyco_hydro_9 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00760 Cucumo_coat > GO:viral capsid ; GO:0019028
Pfam:PF00761 Polyoma_coat2 > GO:structural molecule activity ; GO:0005198
Pfam:PF00761 Polyoma_coat2 > GO:viral capsid ; GO:0019028
Pfam:PF00762 Ferrochelatase > GO:ferrochelatase activity ; GO:0004325
Pfam:PF00762 Ferrochelatase > GO:heme biosynthetic process ; GO:0006783
Pfam:PF00763 THF_DHG_CYH > GO:catalytic activity ; GO:0003824
Pfam:PF00763 THF_DHG_CYH > GO:methylenetetrahydrofolate dehydrogenase (NADP+) activity ; GO:0004488
Pfam:PF00763 THF_DHG_CYH > GO:folic acid-containing compound biosynthetic process ; GO:0009396
Pfam:PF00763 THF_DHG_CYH > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00764 Arginosuc_synth > GO:argininosuccinate synthase activity ; GO:0004055
Pfam:PF00764 Arginosuc_synth > GO:ATP binding ; GO:0005524
Pfam:PF00764 Arginosuc_synth > GO:arginine biosynthetic process ; GO:0006526
Pfam:PF00765 Autoind_synth > GO:signal transduction ; GO:0007165
Pfam:PF00767 Poty_coat > GO:viral capsid ; GO:0019028
Pfam:PF00768 Peptidase_S11 > GO:serine-type D-Ala-D-Ala carboxypeptidase activity ; GO:0009002
Pfam:PF00768 Peptidase_S11 > GO:proteolysis ; GO:0006508
Pfam:PF00769 ERM > GO:cytoskeletal protein binding ; GO:0008092
Pfam:PF00769 ERM > GO:cytoplasm ; GO:0005737
Pfam:PF00769 ERM > GO:extrinsic component of membrane ; GO:0019898
Pfam:PF00770 Peptidase_C5 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF00770 Peptidase_C5 > GO:proteolysis ; GO:0006508
Pfam:PF00771 FHIPEP > GO:protein secretion ; GO:0009306
Pfam:PF00771 FHIPEP > GO:membrane ; GO:0016020
Pfam:PF00772 DnaB > GO:DNA helicase activity ; GO:0003678
Pfam:PF00772 DnaB > GO:ATP binding ; GO:0005524
Pfam:PF00772 DnaB > GO:DNA replication ; GO:0006260
Pfam:PF00773 RNB > GO:RNA binding ; GO:0003723
Pfam:PF00773 RNB > GO:ribonuclease activity ; GO:0004540
Pfam:PF00775 Dioxygenase_C > GO:catalytic activity ; GO:0003824
Pfam:PF00775 Dioxygenase_C > GO:ferric iron binding ; GO:0008199
Pfam:PF00775 Dioxygenase_C > GO:cellular aromatic compound metabolic process ; GO:0006725
Pfam:PF00775 Dioxygenase_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00777 Glyco_transf_29 > GO:sialyltransferase activity ; GO:0008373
Pfam:PF00777 Glyco_transf_29 > GO:protein glycosylation ; GO:0006486
Pfam:PF00779 BTK > GO:intracellular signal transduction ; GO:0035556
Pfam:PF00780 CNH > GO:small GTPase regulator activity ; GO:0005083
Pfam:PF00781 DAGK_cat > GO:diacylglycerol kinase activity ; GO:0004143
Pfam:PF00781 DAGK_cat > GO:protein kinase C-activating G-protein coupled receptor signaling pathway ; GO:0007205
Pfam:PF00782 DSPc > GO:protein tyrosine/serine/threonine phosphatase activity ; GO:0008138
Pfam:PF00782 DSPc > GO:protein dephosphorylation ; GO:0006470
Pfam:PF00784 MyTH4 > GO:cytoskeleton ; GO:0005856
Pfam:PF00787 PX > GO:phosphatidylinositol binding ; GO:0035091
Pfam:PF00788 RA > GO:signal transduction ; GO:0007165
Pfam:PF00789 UBX > GO:protein binding ; GO:0005515
Pfam:PF00790 VHS > GO:intracellular protein transport ; GO:0006886
Pfam:PF00793 DAHP_synth_1 > GO:biosynthetic process ; GO:0009058
Pfam:PF00795 CN_hydrolase > GO:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds ; GO:0016810
Pfam:PF00795 CN_hydrolase > GO:nitrogen compound metabolic process ; GO:0006807
Pfam:PF00796 PSI_8 > GO:photosynthesis ; GO:0015979
Pfam:PF00796 PSI_8 > GO:photosystem I ; GO:0009522
Pfam:PF00797 Acetyltransf_2 > GO:acetyltransferase activity ; GO:0016407
Pfam:PF00797 Acetyltransf_2 > GO:metabolic process ; GO:0008152
Pfam:PF00798 Arena_glycoprot > GO:viral envelope ; GO:0019031
Pfam:PF00799 Gemini_AL1 > GO:DNA replication ; GO:0006260
Pfam:PF00800 PDT > GO:prephenate dehydratase activity ; GO:0004664
Pfam:PF00800 PDT > GO:L-phenylalanine biosynthetic process ; GO:0009094
Pfam:PF00802 Glycoprotein_G > GO:virion membrane ; GO:0055036
Pfam:PF00804 Syntaxin > GO:membrane ; GO:0016020
Pfam:PF00806 PUF > GO:RNA binding ; GO:0003723
Pfam:PF00808 CBFD_NFYB_HMF > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF00808 CBFD_NFYB_HMF > GO:intracellular ; GO:0005622
Pfam:PF00809 Pterin_bind > GO:pteridine-containing compound metabolic process ; GO:0042558
Pfam:PF00810 ER_lumen_recept > GO:ER retention sequence binding ; GO:0046923
Pfam:PF00810 ER_lumen_recept > GO:protein retention in ER lumen ; GO:0006621
Pfam:PF00810 ER_lumen_recept > GO:integral component of membrane ; GO:0016021
Pfam:PF00811 Ependymin > GO:calcium ion binding ; GO:0005509
Pfam:PF00811 Ependymin > GO:cell-matrix adhesion ; GO:0007160
Pfam:PF00811 Ependymin > GO:extracellular region ; GO:0005576
Pfam:PF00812 Ephrin > GO:membrane ; GO:0016020
Pfam:PF00813 FliP > GO:protein secretion ; GO:0009306
Pfam:PF00813 FliP > GO:membrane ; GO:0016020
Pfam:PF00815 Histidinol_dh > GO:histidinol dehydrogenase activity ; GO:0004399
Pfam:PF00815 Histidinol_dh > GO:zinc ion binding ; GO:0008270
Pfam:PF00815 Histidinol_dh > GO:NAD binding ; GO:0051287
Pfam:PF00815 Histidinol_dh > GO:histidine biosynthetic process ; GO:0000105
Pfam:PF00815 Histidinol_dh > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00816 Histone_HNS > GO:DNA binding ; GO:0003677
Pfam:PF00816 Histone_HNS > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00816 Histone_HNS > GO:intracellular ; GO:0005622
Pfam:PF00817 IMS > GO:damaged DNA binding ; GO:0003684
Pfam:PF00817 IMS > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF00817 IMS > GO:DNA repair ; GO:0006281
Pfam:PF00818 Ice_nucleation > GO:cell outer membrane ; GO:0009279
Pfam:PF00819 Myotoxins > GO:envenomation resulting in occlusion of the pore of voltage-gated potassium channel in other organism ; GO:0044564
Pfam:PF00820 Lipoprotein_1 > GO:cell outer membrane ; GO:0009279
Pfam:PF00821 PEPCK > GO:phosphoenolpyruvate carboxykinase activity ; GO:0004611
Pfam:PF00821 PEPCK > GO:GTP binding ; GO:0005525
Pfam:PF00821 PEPCK > GO:gluconeogenesis ; GO:0006094
Pfam:PF00822 PMP22_Claudin > GO:integral component of membrane ; GO:0016021
Pfam:PF00825 Ribonuclease_P > GO:tRNA binding ; GO:0000049
Pfam:PF00825 Ribonuclease_P > GO:ribonuclease P activity ; GO:0004526
Pfam:PF00825 Ribonuclease_P > GO:tRNA processing ; GO:0008033
Pfam:PF00827 Ribosomal_L15e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00827 Ribosomal_L15e > GO:translation ; GO:0006412
Pfam:PF00827 Ribosomal_L15e > GO:ribosome ; GO:0005840
Pfam:PF00829 Ribosomal_L21p > GO:ribosome ; GO:0005840
Pfam:PF00830 Ribosomal_L28 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00830 Ribosomal_L28 > GO:translation ; GO:0006412
Pfam:PF00830 Ribosomal_L28 > GO:intracellular ; GO:0005622
Pfam:PF00830 Ribosomal_L28 > GO:ribosome ; GO:0005840
Pfam:PF00831 Ribosomal_L29 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00831 Ribosomal_L29 > GO:translation ; GO:0006412
Pfam:PF00831 Ribosomal_L29 > GO:intracellular ; GO:0005622
Pfam:PF00831 Ribosomal_L29 > GO:ribosome ; GO:0005840
Pfam:PF00832 Ribosomal_L39 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00832 Ribosomal_L39 > GO:translation ; GO:0006412
Pfam:PF00832 Ribosomal_L39 > GO:intracellular ; GO:0005622
Pfam:PF00832 Ribosomal_L39 > GO:ribosome ; GO:0005840
Pfam:PF00833 Ribosomal_S17e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00833 Ribosomal_S17e > GO:translation ; GO:0006412
Pfam:PF00833 Ribosomal_S17e > GO:intracellular ; GO:0005622
Pfam:PF00833 Ribosomal_S17e > GO:ribosome ; GO:0005840
Pfam:PF00834 Ribul_P_3_epim > GO:racemase and epimerase activity, acting on carbohydrates and derivatives ; GO:0016857
Pfam:PF00834 Ribul_P_3_epim > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00836 Stathmin > GO:regulation of microtubule polymerization or depolymerization ; GO:0031110
Pfam:PF00837 T4_deiodinase > GO:thyroxine 5'-deiodinase activity ; GO:0004800
Pfam:PF00837 T4_deiodinase > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00839 Cys_rich_FGFR > GO:membrane ; GO:0016020
Pfam:PF00840 Glyco_hydro_7 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF00840 Glyco_hydro_7 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00841 Protamine_P2 > GO:DNA binding ; GO:0003677
Pfam:PF00841 Protamine_P2 > GO:spermatogenesis ; GO:0007283
Pfam:PF00841 Protamine_P2 > GO:nucleosome ; GO:0000786
Pfam:PF00841 Protamine_P2 > GO:nucleus ; GO:0005634
Pfam:PF00843 Arena_nucleocap > GO:viral nucleocapsid ; GO:0019013
Pfam:PF00844 Gemini_coat > GO:structural molecule activity ; GO:0005198
Pfam:PF00844 Gemini_coat > GO:viral capsid ; GO:0019028
Pfam:PF00845 Gemini_BL1 > GO:DNA binding ; GO:0003677
Pfam:PF00845 Gemini_BL1 > GO:transport of virus in host, cell to cell ; GO:0046740
Pfam:PF00845 Gemini_BL1 > GO:host cell membrane ; GO:0033644
Pfam:PF00846 Hanta_nucleocap > GO:viral nucleocapsid ; GO:0019013
Pfam:PF00847 AP2 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00847 AP2 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00848 Ring_hydroxyl_A > GO:iron ion binding ; GO:0005506
Pfam:PF00848 Ring_hydroxyl_A > GO:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor ; GO:0016708
Pfam:PF00848 Ring_hydroxyl_A > GO:2 iron, 2 sulfur cluster binding ; GO:0051537
Pfam:PF00848 Ring_hydroxyl_A > GO:aromatic compound catabolic process ; GO:0019439
Pfam:PF00848 Ring_hydroxyl_A > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00849 PseudoU_synth_2 > GO:RNA binding ; GO:0003723
Pfam:PF00849 PseudoU_synth_2 > GO:pseudouridine synthase activity ; GO:0009982
Pfam:PF00849 PseudoU_synth_2 > GO:pseudouridine synthesis ; GO:0001522
Pfam:PF00849 PseudoU_synth_2 > GO:RNA modification ; GO:0009451
Pfam:PF00851 Peptidase_C6 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF00851 Peptidase_C6 > GO:proteolysis ; GO:0006508
Pfam:PF00852 Glyco_transf_10 > GO:fucosyltransferase activity ; GO:0008417
Pfam:PF00852 Glyco_transf_10 > GO:protein glycosylation ; GO:0006486
Pfam:PF00852 Glyco_transf_10 > GO:membrane ; GO:0016020
Pfam:PF00853 Runt > GO:DNA binding ; GO:0003677
Pfam:PF00853 Runt > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00853 Runt > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00854 PTR2 > GO:transporter activity ; GO:0005215
Pfam:PF00854 PTR2 > GO:transport ; GO:0006810
Pfam:PF00854 PTR2 > GO:membrane ; GO:0016020
Pfam:PF00856 SET > GO:protein binding ; GO:0005515
Pfam:PF00857 Isochorismatase > GO:catalytic activity ; GO:0003824
Pfam:PF00857 Isochorismatase > GO:metabolic process ; GO:0008152
Pfam:PF00858 ASC > GO:sodium channel activity ; GO:0005272
Pfam:PF00858 ASC > GO:sodium ion transport ; GO:0006814
Pfam:PF00858 ASC > GO:membrane ; GO:0016020
Pfam:PF00859 CTF_NFI > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00859 CTF_NFI > GO:DNA replication ; GO:0006260
Pfam:PF00859 CTF_NFI > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00859 CTF_NFI > GO:nucleus ; GO:0005634
Pfam:PF00860 Xan_ur_permease > GO:transporter activity ; GO:0005215
Pfam:PF00860 Xan_ur_permease > GO:transport ; GO:0006810
Pfam:PF00860 Xan_ur_permease > GO:transmembrane transport ; GO:0055085
Pfam:PF00860 Xan_ur_permease > GO:membrane ; GO:0016020
Pfam:PF00861 Ribosomal_L18p > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00861 Ribosomal_L18p > GO:translation ; GO:0006412
Pfam:PF00861 Ribosomal_L18p > GO:intracellular ; GO:0005622
Pfam:PF00861 Ribosomal_L18p > GO:ribosome ; GO:0005840
Pfam:PF00862 Sucrose_synth > GO:sucrose metabolic process ; GO:0005985
Pfam:PF00863 Peptidase_C4 > GO:cysteine-type peptidase activity ; GO:0008234
Pfam:PF00863 Peptidase_C4 > GO:proteolysis ; GO:0006508
Pfam:PF00864 P2X_receptor > GO:purinergic nucleotide receptor activity ; GO:0001614
Pfam:PF00864 P2X_receptor > GO:ion channel activity ; GO:0005216
Pfam:PF00864 P2X_receptor > GO:ATP binding ; GO:0005524
Pfam:PF00864 P2X_receptor > GO:ion transport ; GO:0006811
Pfam:PF00864 P2X_receptor > GO:membrane ; GO:0016020
Pfam:PF00865 Osteopontin > GO:ossification ; GO:0001503
Pfam:PF00865 Osteopontin > GO:cell adhesion ; GO:0007155
Pfam:PF00866 Ring_hydroxyl_B > GO:catalytic activity ; GO:0003824
Pfam:PF00866 Ring_hydroxyl_B > GO:cellular aromatic compound metabolic process ; GO:0006725
Pfam:PF00866 Ring_hydroxyl_B > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00867 XPG_I > GO:nuclease activity ; GO:0004518
Pfam:PF00868 Transglut_N > GO:peptide cross-linking ; GO:0018149
Pfam:PF00869 Flavi_glycoprot > GO:protein dimerization activity ; GO:0046983
Pfam:PF00870 P53 > GO:transcription regulatory region DNA binding ; GO:0044212
Pfam:PF00871 Acetate_kinase > GO:kinase activity ; GO:0016301
Pfam:PF00871 Acetate_kinase > GO:phosphotransferase activity, carboxyl group as acceptor ; GO:0016774
Pfam:PF00871 Acetate_kinase > GO:metabolic process ; GO:0008152
Pfam:PF00871 Acetate_kinase > GO:phosphorylation ; GO:0016310
Pfam:PF00871 Acetate_kinase > GO:intracellular ; GO:0005622
Pfam:PF00872 Transposase_mut > GO:DNA binding ; GO:0003677
Pfam:PF00872 Transposase_mut > GO:transposase activity ; GO:0004803
Pfam:PF00872 Transposase_mut > GO:transposition, DNA-mediated ; GO:0006313
Pfam:PF00873 ACR_tran > GO:transporter activity ; GO:0005215
Pfam:PF00873 ACR_tran > GO:transport ; GO:0006810
Pfam:PF00873 ACR_tran > GO:membrane ; GO:0016020
Pfam:PF00874 PRD > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00876 Innexin > GO:gap junction ; GO:0005921
Pfam:PF00878 CIMR > GO:transporter activity ; GO:0005215
Pfam:PF00878 CIMR > GO:transport ; GO:0006810
Pfam:PF00878 CIMR > GO:cytoplasm ; GO:0005737
Pfam:PF00878 CIMR > GO:integral component of membrane ; GO:0016021
Pfam:PF00879 Defensin_propep > GO:defense response ; GO:0006952
Pfam:PF00883 Peptidase_M17 > GO:aminopeptidase activity ; GO:0004177
Pfam:PF00883 Peptidase_M17 > GO:proteolysis ; GO:0006508
Pfam:PF00883 Peptidase_M17 > GO:intracellular ; GO:0005622
Pfam:PF00884 Sulfatase > GO:sulfuric ester hydrolase activity ; GO:0008484
Pfam:PF00884 Sulfatase > GO:metabolic process ; GO:0008152
Pfam:PF00885 DMRL_synthase > GO:riboflavin biosynthetic process ; GO:0009231
Pfam:PF00885 DMRL_synthase > GO:riboflavin synthase complex ; GO:0009349
Pfam:PF00886 Ribosomal_S16 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00886 Ribosomal_S16 > GO:translation ; GO:0006412
Pfam:PF00886 Ribosomal_S16 > GO:intracellular ; GO:0005622
Pfam:PF00886 Ribosomal_S16 > GO:ribosome ; GO:0005840
Pfam:PF00887 ACBP > GO:fatty-acyl-CoA binding ; GO:0000062
Pfam:PF00888 Cullin > GO:ubiquitin protein ligase binding ; GO:0031625
Pfam:PF00888 Cullin > GO:ubiquitin-dependent protein catabolic process ; GO:0006511
Pfam:PF00888 Cullin > GO:cullin-RING ubiquitin ligase complex ; GO:0031461
Pfam:PF00889 EF_TS > GO:translation elongation factor activity ; GO:0003746
Pfam:PF00889 EF_TS > GO:translational elongation ; GO:0006414
Pfam:PF00889 EF_TS > GO:intracellular ; GO:0005622
Pfam:PF00891 Methyltransf_2 > GO:O-methyltransferase activity ; GO:0008171
Pfam:PF00892 EamA > GO:membrane ; GO:0016020
Pfam:PF00893 Multi_Drug_Res > GO:integral component of membrane ; GO:0016021
Pfam:PF00894 Luteo_coat > GO:structural molecule activity ; GO:0005198
Pfam:PF00894 Luteo_coat > GO:viral capsid ; GO:0019028
Pfam:PF00895 ATP-synt_8 > GO:hydrogen ion transmembrane transporter activity ; GO:0015078
Pfam:PF00895 ATP-synt_8 > GO:ATP synthesis coupled proton transport ; GO:0015986
Pfam:PF00895 ATP-synt_8 > GO:mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0000276
Pfam:PF00897 Orbi_VP7 > GO:structural molecule activity ; GO:0005198
Pfam:PF00897 Orbi_VP7 > GO:viral capsid ; GO:0019028
Pfam:PF00898 Orbi_VP2 > GO:structural molecule activity ; GO:0005198
Pfam:PF00898 Orbi_VP2 > GO:viral capsid ; GO:0019028
Pfam:PF00899 ThiF > GO:catalytic activity ; GO:0003824
Pfam:PF00901 Orbi_VP5 > GO:structural molecule activity ; GO:0005198
Pfam:PF00901 Orbi_VP5 > GO:viral capsid ; GO:0019028
Pfam:PF00902 TatC > GO:integral component of membrane ; GO:0016021
Pfam:PF00904 Involucrin > GO:keratinization ; GO:0031424
Pfam:PF00904 Involucrin > GO:cytoplasm ; GO:0005737
Pfam:PF00905 Transpeptidase > GO:penicillin binding ; GO:0008658
Pfam:PF00906 Hepatitis_core > GO:structural molecule activity ; GO:0005198
Pfam:PF00906 Hepatitis_core > GO:pathogenesis ; GO:0009405
Pfam:PF00907 T-box > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF00907 T-box > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00907 T-box > GO:nucleus ; GO:0005634
Pfam:PF00908 dTDP_sugar_isom > GO:dTDP-4-dehydrorhamnose 3,5-epimerase activity ; GO:0008830
Pfam:PF00908 dTDP_sugar_isom > GO:lipopolysaccharide biosynthetic process ; GO:0009103
Pfam:PF00909 Ammonium_transp > GO:ammonium transmembrane transporter activity ; GO:0008519
Pfam:PF00909 Ammonium_transp > GO:ammonium transport ; GO:0015696
Pfam:PF00909 Ammonium_transp > GO:membrane ; GO:0016020
Pfam:PF00910 RNA_helicase > GO:RNA binding ; GO:0003723
Pfam:PF00910 RNA_helicase > GO:RNA helicase activity ; GO:0003724
Pfam:PF00913 Trypan_glycop > GO:evasion or tolerance of host immune response ; GO:0020012
Pfam:PF00916 Sulfate_transp > GO:sulfate transmembrane transporter activity ; GO:0015116
Pfam:PF00916 Sulfate_transp > GO:sulfate transport ; GO:0008272
Pfam:PF00916 Sulfate_transp > GO:integral component of membrane ; GO:0016021
Pfam:PF00917 MATH > GO:protein binding ; GO:0005515
Pfam:PF00918 Gastrin > GO:hormone activity ; GO:0005179
Pfam:PF00918 Gastrin > GO:extracellular region ; GO:0005576
Pfam:PF00919 UPF0004 > GO:catalytic activity ; GO:0003824
Pfam:PF00919 UPF0004 > GO:4 iron, 4 sulfur cluster binding ; GO:0051539
Pfam:PF00919 UPF0004 > GO:RNA modification ; GO:0009451
Pfam:PF00920 ILVD_EDD > GO:catalytic activity ; GO:0003824
Pfam:PF00920 ILVD_EDD > GO:metabolic process ; GO:0008152
Pfam:PF00921 Lipoprotein_2 > GO:membrane ; GO:0016020
Pfam:PF00922 Phosphoprotein > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF00923 Transaldolase > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00924 MS_channel > GO:transmembrane transport ; GO:0055085
Pfam:PF00924 MS_channel > GO:membrane ; GO:0016020
Pfam:PF00925 GTP_cyclohydro2 > GO:GTP cyclohydrolase II activity ; GO:0003935
Pfam:PF00925 GTP_cyclohydro2 > GO:riboflavin biosynthetic process ; GO:0009231
Pfam:PF00926 DHBP_synthase > GO:3,4-dihydroxy-2-butanone-4-phosphate synthase activity ; GO:0008686
Pfam:PF00926 DHBP_synthase > GO:riboflavin biosynthetic process ; GO:0009231
Pfam:PF00927 Transglut_C > GO:protein-glutamine gamma-glutamyltransferase activity ; GO:0003810
Pfam:PF00927 Transglut_C > GO:peptide cross-linking ; GO:0018149
Pfam:PF00928 Adap_comp_sub > GO:protein binding ; GO:0005515
Pfam:PF00928 Adap_comp_sub > GO:intracellular protein transport ; GO:0006886
Pfam:PF00928 Adap_comp_sub > GO:vesicle-mediated transport ; GO:0016192
Pfam:PF00928 Adap_comp_sub > GO:clathrin adaptor complex ; GO:0030131
Pfam:PF00930 DPPIV_N > GO:proteolysis ; GO:0006508
Pfam:PF00930 DPPIV_N > GO:membrane ; GO:0016020
Pfam:PF00931 NB-ARC > GO:ADP binding ; GO:0043531
Pfam:PF00933 Glyco_hydro_3 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF00933 Glyco_hydro_3 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00935 Ribosomal_L44 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF00935 Ribosomal_L44 > GO:translation ; GO:0006412
Pfam:PF00935 Ribosomal_L44 > GO:intracellular ; GO:0005622
Pfam:PF00935 Ribosomal_L44 > GO:ribosome ; GO:0005840
Pfam:PF00937 Corona_nucleoca > GO:viral nucleocapsid ; GO:0019013
Pfam:PF00939 Na_sulph_symp > GO:transporter activity ; GO:0005215
Pfam:PF00939 Na_sulph_symp > GO:sodium ion transport ; GO:0006814
Pfam:PF00939 Na_sulph_symp > GO:transmembrane transport ; GO:0055085
Pfam:PF00939 Na_sulph_symp > GO:membrane ; GO:0016020
Pfam:PF00940 RNA_pol > GO:DNA binding ; GO:0003677
Pfam:PF00940 RNA_pol > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF00940 RNA_pol > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF00941 FAD_binding_5 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF00941 FAD_binding_5 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00942 CBM_3 > GO:cellulose binding ; GO:0030248
Pfam:PF00942 CBM_3 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF00943 Alpha_E2_glycop > GO:structural molecule activity ; GO:0005198
Pfam:PF00943 Alpha_E2_glycop > GO:viral capsid ; GO:0019028
Pfam:PF00944 Peptidase_S3 > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF00944 Peptidase_S3 > GO:proteolysis ; GO:0006508
Pfam:PF00944 Peptidase_S3 > GO:membrane ; GO:0016020
Pfam:PF00945 Rhabdo_ncap > GO:viral nucleocapsid ; GO:0019013
Pfam:PF00946 Mononeg_RNA_pol > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF00946 Mononeg_RNA_pol > GO:mRNA (guanine-N7-)-methyltransferase activity ; GO:0004482
Pfam:PF00946 Mononeg_RNA_pol > GO:ATP binding ; GO:0005524
Pfam:PF00946 Mononeg_RNA_pol > GO:7-methylguanosine mRNA capping ; GO:0006370
Pfam:PF00946 Mononeg_RNA_pol > GO:virion ; GO:0019012
Pfam:PF00947 Pico_P2A > GO:peptidase activity ; GO:0008233
Pfam:PF00947 Pico_P2A > GO:proteolysis ; GO:0006508
Pfam:PF00947 Pico_P2A > GO:viral process ; GO:0016032
Pfam:PF00949 Peptidase_S7 > GO:RNA binding ; GO:0003723
Pfam:PF00949 Peptidase_S7 > GO:RNA helicase activity ; GO:0003724
Pfam:PF00949 Peptidase_S7 > GO:ATP binding ; GO:0005524
Pfam:PF00950 ABC-3 > GO:ATP binding ; GO:0005524
Pfam:PF00950 ABC-3 > GO:ATPase activity, coupled to transmembrane movement of substances ; GO:0042626
Pfam:PF00950 ABC-3 > GO:transport ; GO:0006810
Pfam:PF00950 ABC-3 > GO:membrane ; GO:0016020
Pfam:PF00951 Arteri_Gl > GO:viral envelope ; GO:0019031
Pfam:PF00952 Bunya_nucleocap > GO:viral nucleocapsid ; GO:0019013
Pfam:PF00953 Glycos_transf_4 > GO:phospho-N-acetylmuramoyl-pentapeptide-transferase activity ; GO:0008963
Pfam:PF00953 Glycos_transf_4 > GO:integral component of membrane ; GO:0016021
Pfam:PF00954 S_locus_glycop > GO:recognition of pollen ; GO:0048544
Pfam:PF00955 HCO3_cotransp > GO:anion transport ; GO:0006820
Pfam:PF00955 HCO3_cotransp > GO:integral component of membrane ; GO:0016021
Pfam:PF00956 NAP > GO:nucleosome assembly ; GO:0006334
Pfam:PF00956 NAP > GO:nucleus ; GO:0005634
Pfam:PF00957 Synaptobrevin > GO:vesicle-mediated transport ; GO:0016192
Pfam:PF00957 Synaptobrevin > GO:integral component of membrane ; GO:0016021
Pfam:PF00958 GMP_synt_C > GO:GMP synthase (glutamine-hydrolyzing) activity ; GO:0003922
Pfam:PF00958 GMP_synt_C > GO:ATP binding ; GO:0005524
Pfam:PF00958 GMP_synt_C > GO:purine nucleotide biosynthetic process ; GO:0006164
Pfam:PF00958 GMP_synt_C > GO:GMP biosynthetic process ; GO:0006177
Pfam:PF00959 Phage_lysozyme > GO:lysozyme activity ; GO:0003796
Pfam:PF00959 Phage_lysozyme > GO:peptidoglycan catabolic process ; GO:0009253
Pfam:PF00959 Phage_lysozyme > GO:cell wall macromolecule catabolic process ; GO:0016998
Pfam:PF00960 Neocarzinostat > GO:DNA binding ; GO:0003677
Pfam:PF00960 Neocarzinostat > GO:defense response ; GO:0006952
Pfam:PF00961 LAGLIDADG_1 > GO:DNA binding ; GO:0003677
Pfam:PF00961 LAGLIDADG_1 > GO:endonuclease activity ; GO:0004519
Pfam:PF00961 LAGLIDADG_1 > GO:intron homing ; GO:0006314
Pfam:PF00962 A_deaminase > GO:deaminase activity ; GO:0019239
Pfam:PF00963 Cohesin > GO:carbohydrate binding ; GO:0030246
Pfam:PF00963 Cohesin > GO:polysaccharide catabolic process ; GO:0000272
Pfam:PF00964 Elicitin > GO:defense response ; GO:0006952
Pfam:PF00964 Elicitin > GO:pathogenesis ; GO:0009405
Pfam:PF00964 Elicitin > GO:extracellular region ; GO:0005576
Pfam:PF00965 TIMP > GO:metalloendopeptidase inhibitor activity ; GO:0008191
Pfam:PF00967 Barwin > GO:defense response to bacterium ; GO:0042742
Pfam:PF00967 Barwin > GO:defense response to fungus ; GO:0050832
Pfam:PF00969 MHC_II_beta > GO:immune response ; GO:0006955
Pfam:PF00969 MHC_II_beta > GO:antigen processing and presentation ; GO:0019882
Pfam:PF00969 MHC_II_beta > GO:membrane ; GO:0016020
Pfam:PF00969 MHC_II_beta > GO:MHC class II protein complex ; GO:0042613
Pfam:PF00971 EIAV_GP90 > GO:structural molecule activity ; GO:0005198
Pfam:PF00971 EIAV_GP90 > GO:viral capsid ; GO:0019028
Pfam:PF00972 Flavi_NS5 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF00972 Flavi_NS5 > GO:ATP binding ; GO:0005524
Pfam:PF00973 Paramyxo_ncap > GO:structural molecule activity ; GO:0005198
Pfam:PF00973 Paramyxo_ncap > GO:viral nucleocapsid ; GO:0019013
Pfam:PF00974 Rhabdo_glycop > GO:viral envelope ; GO:0019031
Pfam:PF00975 Thioesterase > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF00975 Thioesterase > GO:biosynthetic process ; GO:0009058
Pfam:PF00977 His_biosynth > GO:histidine biosynthetic process ; GO:0000105
Pfam:PF00978 RdRP_2 > GO:RNA binding ; GO:0003723
Pfam:PF00978 RdRP_2 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF00978 RdRP_2 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF00979 Reovirus_cap > GO:structural molecule activity ; GO:0005198
Pfam:PF00979 Reovirus_cap > GO:viral life cycle ; GO:0019058
Pfam:PF00980 Rota_Capsid_VP6 > GO:structural molecule activity ; GO:0005198
Pfam:PF00980 Rota_Capsid_VP6 > GO:viral capsid ; GO:0019028
Pfam:PF00981 Rota_NS53 > GO:RNA binding ; GO:0003723
Pfam:PF00982 Glyco_transf_20 > GO:catalytic activity ; GO:0003824
Pfam:PF00982 Glyco_transf_20 > GO:trehalose biosynthetic process ; GO:0005992
Pfam:PF00983 Tymo_coat > GO:structural molecule activity ; GO:0005198
Pfam:PF00983 Tymo_coat > GO:viral capsid ; GO:0019028
Pfam:PF00984 UDPG_MGDP_dh > GO:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ; GO:0016616
Pfam:PF00984 UDPG_MGDP_dh > GO:NAD binding ; GO:0051287
Pfam:PF00984 UDPG_MGDP_dh > GO:oxidation-reduction process ; GO:0055114
Pfam:PF00985 MSA_2 > GO:cell adhesion ; GO:0007155
Pfam:PF00986 DNA_gyraseB_C > GO:DNA binding ; GO:0003677
Pfam:PF00986 DNA_gyraseB_C > GO:DNA topoisomerase type II (ATP-hydrolyzing) activity ; GO:0003918
Pfam:PF00986 DNA_gyraseB_C > GO:ATP binding ; GO:0005524
Pfam:PF00986 DNA_gyraseB_C > GO:DNA topological change ; GO:0006265
Pfam:PF00989 PAS > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF00992 Troponin > GO:troponin complex ; GO:0005861
Pfam:PF00993 MHC_II_alpha > GO:immune response ; GO:0006955
Pfam:PF00993 MHC_II_alpha > GO:antigen processing and presentation ; GO:0019882
Pfam:PF00993 MHC_II_alpha > GO:membrane ; GO:0016020
Pfam:PF00993 MHC_II_alpha > GO:MHC class II protein complex ; GO:0042613
Pfam:PF00994 MoCF_biosynth > GO:Mo-molybdopterin cofactor biosynthetic process ; GO:0006777
Pfam:PF00995 Sec1 > GO:vesicle docking involved in exocytosis ; GO:0006904
Pfam:PF00995 Sec1 > GO:vesicle-mediated transport ; GO:0016192
Pfam:PF00997 Casein_kappa > GO:extracellular region ; GO:0005576
Pfam:PF00998 RdRP_3 > GO:RNA binding ; GO:0003723
Pfam:PF00998 RdRP_3 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF00998 RdRP_3 > GO:viral RNA genome replication ; GO:0039694
Pfam:PF00999 Na_H_Exchanger > GO:solute:proton antiporter activity ; GO:0015299
Pfam:PF00999 Na_H_Exchanger > GO:cation transport ; GO:0006812
Pfam:PF00999 Na_H_Exchanger > GO:transmembrane transport ; GO:0055085
Pfam:PF00999 Na_H_Exchanger > GO:integral component of membrane ; GO:0016021
Pfam:PF01000 RNA_pol_A_bac > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF01000 RNA_pol_A_bac > GO:protein dimerization activity ; GO:0046983
Pfam:PF01000 RNA_pol_A_bac > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF01001 HCV_NS4b > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF01001 HCV_NS4b > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF01001 HCV_NS4b > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF01001 HCV_NS4b > GO:nucleoside-triphosphatase activity ; GO:0017111
Pfam:PF01002 Flavi_NS2B > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF01002 Flavi_NS2B > GO:virion ; GO:0019012
Pfam:PF01003 Flavi_capsid > GO:structural molecule activity ; GO:0005198
Pfam:PF01003 Flavi_capsid > GO:viral capsid ; GO:0019028
Pfam:PF01004 Flavi_M > GO:viral life cycle ; GO:0019058
Pfam:PF01004 Flavi_M > GO:viral envelope ; GO:0019031
Pfam:PF01005 Flavi_NS2A > GO:double-stranded RNA binding ; GO:0003725
Pfam:PF01006 HCV_NS4a > GO:viral process ; GO:0016032
Pfam:PF01006 HCV_NS4a > GO:virion ; GO:0019012
Pfam:PF01007 IRK > GO:inward rectifier potassium channel activity ; GO:0005242
Pfam:PF01007 IRK > GO:potassium ion transport ; GO:0006813
Pfam:PF01007 IRK > GO:integral component of membrane ; GO:0016021
Pfam:PF01008 IF-2B > GO:cellular metabolic process ; GO:0044237
Pfam:PF01010 Oxidored_q1_C > GO:NADH dehydrogenase (ubiquinone) activity ; GO:0008137
Pfam:PF01010 Oxidored_q1_C > GO:ATP synthesis coupled electron transport ; GO:0042773
Pfam:PF01010 Oxidored_q1_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01015 Ribosomal_S3Ae > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01015 Ribosomal_S3Ae > GO:translation ; GO:0006412
Pfam:PF01015 Ribosomal_S3Ae > GO:intracellular ; GO:0005622
Pfam:PF01015 Ribosomal_S3Ae > GO:ribosome ; GO:0005840
Pfam:PF01016 Ribosomal_L27 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01016 Ribosomal_L27 > GO:translation ; GO:0006412
Pfam:PF01016 Ribosomal_L27 > GO:intracellular ; GO:0005622
Pfam:PF01016 Ribosomal_L27 > GO:ribosome ; GO:0005840
Pfam:PF01017 STAT_alpha > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF01017 STAT_alpha > GO:signal transducer activity ; GO:0004871
Pfam:PF01017 STAT_alpha > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01017 STAT_alpha > GO:signal transduction ; GO:0007165
Pfam:PF01017 STAT_alpha > GO:nucleus ; GO:0005634
Pfam:PF01018 GTP1_OBG > GO:GTP binding ; GO:0005525
Pfam:PF01019 G_glu_transpept > GO:gamma-glutamyltransferase activity ; GO:0003840
Pfam:PF01019 G_glu_transpept > GO:glutathione metabolic process ; GO:0006749
Pfam:PF01020 Ribosomal_L40e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01020 Ribosomal_L40e > GO:translation ; GO:0006412
Pfam:PF01020 Ribosomal_L40e > GO:ribosome ; GO:0005840
Pfam:PF01021 TYA > GO:RNA binding ; GO:0003723
Pfam:PF01021 TYA > GO:cytoplasm ; GO:0005737
Pfam:PF01022 HTH_5 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF01022 HTH_5 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01024 Colicin > GO:cytolysis ; GO:0019835
Pfam:PF01024 Colicin > GO:defense response to Gram-negative bacterium ; GO:0050829
Pfam:PF01024 Colicin > GO:integral component of membrane ; GO:0016021
Pfam:PF01025 GrpE > GO:adenyl-nucleotide exchange factor activity ; GO:0000774
Pfam:PF01025 GrpE > GO:protein homodimerization activity ; GO:0042803
Pfam:PF01025 GrpE > GO:chaperone binding ; GO:0051087
Pfam:PF01025 GrpE > GO:protein folding ; GO:0006457
Pfam:PF01026 TatD_DNase > GO:endodeoxyribonuclease activity, producing 5'-phosphomonoesters ; GO:0016888
Pfam:PF01028 Topoisom_I > GO:DNA binding ; GO:0003677
Pfam:PF01028 Topoisom_I > GO:DNA topoisomerase type II (ATP-hydrolyzing) activity ; GO:0003918
Pfam:PF01028 Topoisom_I > GO:DNA topological change ; GO:0006265
Pfam:PF01029 NusB > GO:RNA binding ; GO:0003723
Pfam:PF01029 NusB > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01030 Recep_L_domain > GO:membrane ; GO:0016020
Pfam:PF01031 Dynamin_M > GO:GTP binding ; GO:0005525
Pfam:PF01032 FecCD > GO:transporter activity ; GO:0005215
Pfam:PF01032 FecCD > GO:membrane ; GO:0016020
Pfam:PF01033 Somatomedin_B > GO:scavenger receptor activity ; GO:0005044
Pfam:PF01033 Somatomedin_B > GO:polysaccharide binding ; GO:0030247
Pfam:PF01033 Somatomedin_B > GO:immune response ; GO:0006955
Pfam:PF01035 DNA_binding_1 > GO:catalytic activity ; GO:0003824
Pfam:PF01035 DNA_binding_1 > GO:DNA repair ; GO:0006281
Pfam:PF01036 Bac_rhodopsin > GO:membrane ; GO:0016020
Pfam:PF01039 Carboxyl_trans > GO:ligase activity ; GO:0016874
Pfam:PF01040 UbiA > GO:prenyltransferase activity ; GO:0004659
Pfam:PF01040 UbiA > GO:integral component of membrane ; GO:0016021
Pfam:PF01043 SecA_PP_bind > GO:protein import ; GO:0017038
Pfam:PF01043 SecA_PP_bind > GO:membrane ; GO:0016020
Pfam:PF01044 Vinculin > GO:structural molecule activity ; GO:0005198
Pfam:PF01044 Vinculin > GO:cell adhesion ; GO:0007155
Pfam:PF01044 Vinculin > GO:actin cytoskeleton ; GO:0015629
Pfam:PF01047 MarR > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF01047 MarR > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01047 MarR > GO:intracellular ; GO:0005622
Pfam:PF01048 PNP_UDP_1 > GO:catalytic activity ; GO:0003824
Pfam:PF01048 PNP_UDP_1 > GO:nucleoside metabolic process ; GO:0009116
Pfam:PF01049 Cadherin_C > GO:calcium ion binding ; GO:0005509
Pfam:PF01049 Cadherin_C > GO:homophilic cell adhesion ; GO:0007156
Pfam:PF01049 Cadherin_C > GO:membrane ; GO:0016020
Pfam:PF01050 MannoseP_isomer > GO:nucleotidyltransferase activity ; GO:0016779
Pfam:PF01050 MannoseP_isomer > GO:polysaccharide metabolic process ; GO:0005976
Pfam:PF01051 Rep_3 > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF01051 Rep_3 > GO:DNA replication initiation ; GO:0006270
Pfam:PF01051 Rep_3 > GO:extrachromosomal circular DNA ; GO:0005727
Pfam:PF01053 Cys_Met_Meta_PP > GO:pyridoxal phosphate binding ; GO:0030170
Pfam:PF01055 Glyco_hydro_31 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF01055 Glyco_hydro_31 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF01056 Myc_N > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF01056 Myc_N > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01057 Parvo_NS1 > GO:viral genome replication ; GO:0019079
Pfam:PF01058 Oxidored_q6 > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF01058 Oxidored_q6 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01059 Oxidored_q5_N > GO:NADH dehydrogenase (ubiquinone) activity ; GO:0008137
Pfam:PF01059 Oxidored_q5_N > GO:mitochondrial electron transport, NADH to ubiquinone ; GO:0006120
Pfam:PF01059 Oxidored_q5_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01060 DUF290 > GO:extracellular space ; GO:0005615
Pfam:PF01061 ABC2_membrane > GO:membrane ; GO:0016020
Pfam:PF01063 Aminotran_4 > GO:catalytic activity ; GO:0003824
Pfam:PF01063 Aminotran_4 > GO:metabolic process ; GO:0008152
Pfam:PF01064 Activin_recp > GO:transmembrane receptor protein serine/threonine kinase activity ; GO:0004675
Pfam:PF01064 Activin_recp > GO:transforming growth factor beta-activated receptor activity ; GO:0005024
Pfam:PF01064 Activin_recp > GO:membrane ; GO:0016020
Pfam:PF01065 Adeno_hexon > GO:structural molecule activity ; GO:0005198
Pfam:PF01065 Adeno_hexon > GO:viral capsid ; GO:0019028
Pfam:PF01066 CDP-OH_P_transf > GO:phosphotransferase activity, for other substituted phosphate groups ; GO:0016780
Pfam:PF01066 CDP-OH_P_transf > GO:phospholipid biosynthetic process ; GO:0008654
Pfam:PF01066 CDP-OH_P_transf > GO:membrane ; GO:0016020
Pfam:PF01068 DNA_ligase_A_M > GO:DNA ligase (ATP) activity ; GO:0003910
Pfam:PF01068 DNA_ligase_A_M > GO:ATP binding ; GO:0005524
Pfam:PF01068 DNA_ligase_A_M > GO:DNA repair ; GO:0006281
Pfam:PF01068 DNA_ligase_A_M > GO:DNA recombination ; GO:0006310
Pfam:PF01070 FMN_dh > GO:oxidoreductase activity ; GO:0016491
Pfam:PF01073 3Beta_HSD > GO:3-beta-hydroxy-delta5-steroid dehydrogenase activity ; GO:0003854
Pfam:PF01073 3Beta_HSD > GO:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ; GO:0016616
Pfam:PF01073 3Beta_HSD > GO:steroid biosynthetic process ; GO:0006694
Pfam:PF01073 3Beta_HSD > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01074 Glyco_hydro_38 > GO:alpha-mannosidase activity ; GO:0004559
Pfam:PF01074 Glyco_hydro_38 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF01075 Glyco_transf_9 > GO:transferase activity, transferring glycosyl groups ; GO:0016757
Pfam:PF01075 Glyco_transf_9 > GO:metabolic process ; GO:0008152
Pfam:PF01076 Mob_Pre > GO:DNA binding ; GO:0003677
Pfam:PF01076 Mob_Pre > GO:DNA recombination ; GO:0006310
Pfam:PF01076 Mob_Pre > GO:extrachromosomal circular DNA ; GO:0005727
Pfam:PF01077 NIR_SIR > GO:oxidoreductase activity ; GO:0016491
Pfam:PF01077 NIR_SIR > GO:heme binding ; GO:0020037
Pfam:PF01077 NIR_SIR > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF01077 NIR_SIR > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01078 Mg_chelatase > GO:magnesium chelatase activity ; GO:0016851
Pfam:PF01078 Mg_chelatase > GO:photosynthesis ; GO:0015979
Pfam:PF01078 Mg_chelatase > GO:chlorophyll biosynthetic process ; GO:0015995
Pfam:PF01079 Hint > GO:peptidase activity ; GO:0008233
Pfam:PF01079 Hint > GO:proteolysis ; GO:0006508
Pfam:PF01080 Presenilin > GO:aspartic-type endopeptidase activity ; GO:0004190
Pfam:PF01080 Presenilin > GO:integral component of membrane ; GO:0016021
Pfam:PF01081 Aldolase > GO:lyase activity ; GO:0016829
Pfam:PF01081 Aldolase > GO:metabolic process ; GO:0008152
Pfam:PF01082 Cu2_monooxygen > GO:monooxygenase activity ; GO:0004497
Pfam:PF01082 Cu2_monooxygen > GO:copper ion binding ; GO:0005507
Pfam:PF01082 Cu2_monooxygen > GO:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen ; GO:0016715
Pfam:PF01082 Cu2_monooxygen > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01083 Cutinase > GO:hydrolase activity ; GO:0016787
Pfam:PF01083 Cutinase > GO:metabolic process ; GO:0008152
Pfam:PF01084 Ribosomal_S18 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01084 Ribosomal_S18 > GO:translation ; GO:0006412
Pfam:PF01084 Ribosomal_S18 > GO:intracellular ; GO:0005622
Pfam:PF01084 Ribosomal_S18 > GO:ribosome ; GO:0005840
Pfam:PF01085 HH_signal > GO:cell-cell signaling ; GO:0007267
Pfam:PF01085 HH_signal > GO:multicellular organismal development ; GO:0007275
Pfam:PF01086 Clathrin_lg_ch > GO:structural molecule activity ; GO:0005198
Pfam:PF01086 Clathrin_lg_ch > GO:intracellular protein transport ; GO:0006886
Pfam:PF01086 Clathrin_lg_ch > GO:vesicle-mediated transport ; GO:0016192
Pfam:PF01086 Clathrin_lg_ch > GO:clathrin coat of trans-Golgi network vesicle ; GO:0030130
Pfam:PF01086 Clathrin_lg_ch > GO:clathrin coat of coated pit ; GO:0030132
Pfam:PF01087 GalP_UDP_transf > GO:UDP-glucose:hexose-1-phosphate uridylyltransferase activity ; GO:0008108
Pfam:PF01087 GalP_UDP_transf > GO:galactose metabolic process ; GO:0006012
Pfam:PF01088 Peptidase_C12 > GO:ubiquitin-specific protease activity ; GO:0004843
Pfam:PF01088 Peptidase_C12 > GO:ubiquitin-dependent protein catabolic process ; GO:0006511
Pfam:PF01088 Peptidase_C12 > GO:intracellular ; GO:0005622
Pfam:PF01090 Ribosomal_S19e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01090 Ribosomal_S19e > GO:translation ; GO:0006412
Pfam:PF01090 Ribosomal_S19e > GO:intracellular ; GO:0005622
Pfam:PF01090 Ribosomal_S19e > GO:ribosome ; GO:0005840
Pfam:PF01091 PTN_MK_C > GO:growth factor activity ; GO:0008083
Pfam:PF01092 Ribosomal_S6e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01092 Ribosomal_S6e > GO:translation ; GO:0006412
Pfam:PF01092 Ribosomal_S6e > GO:intracellular ; GO:0005622
Pfam:PF01092 Ribosomal_S6e > GO:ribosome ; GO:0005840
Pfam:PF01093 Clusterin > GO:cell death ; GO:0008219
Pfam:PF01095 Pectinesterase > GO:pectinesterase activity ; GO:0030599
Pfam:PF01095 Pectinesterase > GO:cell wall modification ; GO:0042545
Pfam:PF01095 Pectinesterase > GO:cell wall ; GO:0005618
Pfam:PF01096 TFIIS_C > GO:nucleic acid binding ; GO:0003676
Pfam:PF01096 TFIIS_C > GO:zinc ion binding ; GO:0008270
Pfam:PF01096 TFIIS_C > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF01097 Defensin_2 > GO:defense response ; GO:0006952
Pfam:PF01098 FTSW_RODA_SPOVE > GO:cell cycle ; GO:0007049
Pfam:PF01098 FTSW_RODA_SPOVE > GO:integral component of membrane ; GO:0016021
Pfam:PF01101 HMG14_17 > GO:nucleosomal DNA binding ; GO:0031492
Pfam:PF01101 HMG14_17 > GO:chromatin ; GO:0000785
Pfam:PF01101 HMG14_17 > GO:nucleus ; GO:0005634
Pfam:PF01103 Bac_surface_Ag > GO:outer membrane ; GO:0019867
Pfam:PF01104 Bunya_NS-S > GO:viral process ; GO:0016032
Pfam:PF01105 EMP24_GP25L > GO:transport ; GO:0006810
Pfam:PF01105 EMP24_GP25L > GO:integral component of membrane ; GO:0016021
Pfam:PF01106 NifU > GO:iron ion binding ; GO:0005506
Pfam:PF01106 NifU > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF01106 NifU > GO:iron-sulfur cluster assembly ; GO:0016226
Pfam:PF01108 Tissue_fac > GO:protein binding ; GO:0005515
Pfam:PF01109 GM_CSF > GO:granulocyte macrophage colony-stimulating factor receptor binding ; GO:0005129
Pfam:PF01109 GM_CSF > GO:growth factor activity ; GO:0008083
Pfam:PF01109 GM_CSF > GO:immune response ; GO:0006955
Pfam:PF01109 GM_CSF > GO:extracellular region ; GO:0005576
Pfam:PF01110 CNTF > GO:growth ; GO:0040007
Pfam:PF01110 CNTF > GO:cytoplasm ; GO:0005737
Pfam:PF01111 CKS > GO:cyclin-dependent protein serine/threonine kinase regulator activity ; GO:0016538
Pfam:PF01111 CKS > GO:cell cycle ; GO:0007049
Pfam:PF01112 Asparaginase_2 > GO:hydrolase activity ; GO:0016787
Pfam:PF01113 DapB_N > GO:4-hydroxy-tetrahydrodipicolinate reductase ; GO:0008839
Pfam:PF01113 DapB_N > GO:lysine biosynthetic process via diaminopimelate ; GO:0009089
Pfam:PF01113 DapB_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01114 Colipase > GO:enzyme activator activity ; GO:0008047
Pfam:PF01114 Colipase > GO:digestion ; GO:0007586
Pfam:PF01114 Colipase > GO:lipid catabolic process ; GO:0016042
Pfam:PF01114 Colipase > GO:extracellular region ; GO:0005576
Pfam:PF01115 F_actin_cap_B > GO:actin binding ; GO:0003779
Pfam:PF01115 F_actin_cap_B > GO:actin cytoskeleton organization ; GO:0030036
Pfam:PF01115 F_actin_cap_B > GO:F-actin capping protein complex ; GO:0008290
Pfam:PF01115 F_actin_cap_B > GO:WASH complex ; GO:0071203
Pfam:PF01116 F_bP_aldolase > GO:zinc ion binding ; GO:0008270
Pfam:PF01116 F_bP_aldolase > GO:aldehyde-lyase activity ; GO:0016832
Pfam:PF01116 F_bP_aldolase > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF01117 Aerolysin > GO:pathogenesis ; GO:0009405
Pfam:PF01117 Aerolysin > GO:extracellular region ; GO:0005576
Pfam:PF01118 Semialdhyde_dh > GO:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor ; GO:0016620
Pfam:PF01118 Semialdhyde_dh > GO:NAD binding ; GO:0051287
Pfam:PF01118 Semialdhyde_dh > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01119 DNA_mis_repair > GO:ATP binding ; GO:0005524
Pfam:PF01119 DNA_mis_repair > GO:mismatched DNA binding ; GO:0030983
Pfam:PF01119 DNA_mis_repair > GO:mismatch repair ; GO:0006298
Pfam:PF01120 Alpha_L_fucos > GO:alpha-L-fucosidase activity ; GO:0004560
Pfam:PF01120 Alpha_L_fucos > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF01121 CoaE > GO:dephospho-CoA kinase activity ; GO:0004140
Pfam:PF01121 CoaE > GO:ATP binding ; GO:0005524
Pfam:PF01121 CoaE > GO:coenzyme A biosynthetic process ; GO:0015937
Pfam:PF01122 Cobalamin_bind > GO:cobalamin binding ; GO:0031419
Pfam:PF01122 Cobalamin_bind > GO:cobalamin transport ; GO:0015889
Pfam:PF01123 Stap_Strp_toxin > GO:pathogenesis ; GO:0009405
Pfam:PF01125 G10 > GO:nucleus ; GO:0005634
Pfam:PF01126 Heme_oxygenase > GO:heme oxygenase (decyclizing) activity ; GO:0004392
Pfam:PF01126 Heme_oxygenase > GO:heme oxidation ; GO:0006788
Pfam:PF01126 Heme_oxygenase > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01127 Sdh_cyt > GO:oxidoreductase activity, acting on the CH-CH group of donors ; GO:0016627
Pfam:PF01128 IspD > GO:catalytic activity ; GO:0003824
Pfam:PF01128 IspD > GO:isoprenoid biosynthetic process ; GO:0008299
Pfam:PF01129 ART > GO:NAD(P)+-protein-arginine ADP-ribosyltransferase activity ; GO:0003956
Pfam:PF01129 ART > GO:protein ADP-ribosylation ; GO:0006471
Pfam:PF01130 CD36 > GO:cell adhesion ; GO:0007155
Pfam:PF01130 CD36 > GO:membrane ; GO:0016020
Pfam:PF01131 Topoisom_bac > GO:DNA binding ; GO:0003677
Pfam:PF01131 Topoisom_bac > GO:DNA topoisomerase activity ; GO:0003916
Pfam:PF01131 Topoisom_bac > GO:DNA topological change ; GO:0006265
Pfam:PF01132 EFP > GO:translation elongation factor activity ; GO:0003746
Pfam:PF01132 EFP > GO:translational elongation ; GO:0006414
Pfam:PF01133 ER > GO:cell cycle ; GO:0007049
Pfam:PF01134 GIDA > GO:flavin adenine dinucleotide binding ; GO:0050660
Pfam:PF01134 GIDA > GO:tRNA processing ; GO:0008033
Pfam:PF01135 PCMT > GO:protein-L-isoaspartate (D-aspartate) O-methyltransferase activity ; GO:0004719
Pfam:PF01135 PCMT > GO:cellular protein modification process ; GO:0006464
Pfam:PF01136 Peptidase_U32 > GO:peptidase activity ; GO:0008233
Pfam:PF01136 Peptidase_U32 > GO:proteolysis ; GO:0006508
Pfam:PF01139 RtcB > GO:RNA ligase activity ; GO:0008452
Pfam:PF01139 RtcB > GO:RNA processing ; GO:0006396
Pfam:PF01140 Gag_MA > GO:structural molecule activity ; GO:0005198
Pfam:PF01140 Gag_MA > GO:viral capsid ; GO:0019028
Pfam:PF01141 Gag_p12 > GO:viral capsid ; GO:0019028
Pfam:PF01142 TruD > GO:RNA binding ; GO:0003723
Pfam:PF01142 TruD > GO:pseudouridine synthase activity ; GO:0009982
Pfam:PF01142 TruD > GO:pseudouridine synthesis ; GO:0001522
Pfam:PF01142 TruD > GO:RNA modification ; GO:0009451
Pfam:PF01144 CoA_trans > GO:CoA-transferase activity ; GO:0008410
Pfam:PF01144 CoA_trans > GO:metabolic process ; GO:0008152
Pfam:PF01147 Crust_neurohorm > GO:neuropeptide hormone activity ; GO:0005184
Pfam:PF01147 Crust_neurohorm > GO:extracellular region ; GO:0005576
Pfam:PF01148 CTP_transf_1 > GO:transferase activity, transferring phosphorus-containing groups ; GO:0016772
Pfam:PF01148 CTP_transf_1 > GO:membrane ; GO:0016020
Pfam:PF01149 Fapy_DNA_glyco > GO:damaged DNA binding ; GO:0003684
Pfam:PF01149 Fapy_DNA_glyco > GO:DNA-(apurinic or apyrimidinic site) lyase activity ; GO:0003906
Pfam:PF01149 Fapy_DNA_glyco > GO:zinc ion binding ; GO:0008270
Pfam:PF01149 Fapy_DNA_glyco > GO:hydrolase activity, hydrolyzing N-glycosyl compounds ; GO:0016799
Pfam:PF01149 Fapy_DNA_glyco > GO:base-excision repair ; GO:0006284
Pfam:PF01150 GDA1_CD39 > GO:hydrolase activity ; GO:0016787
Pfam:PF01151 ELO > GO:integral component of membrane ; GO:0016021
Pfam:PF01152 Bac_globin > GO:oxygen binding ; GO:0019825
Pfam:PF01153 Glypican > GO:heparan sulfate proteoglycan binding ; GO:0043395
Pfam:PF01153 Glypican > GO:proteinaceous extracellular matrix ; GO:0005578
Pfam:PF01153 Glypican > GO:membrane ; GO:0016020
Pfam:PF01154 HMG_CoA_synt_N > GO:hydroxymethylglutaryl-CoA synthase activity ; GO:0004421
Pfam:PF01154 HMG_CoA_synt_N > GO:isoprenoid biosynthetic process ; GO:0008299
Pfam:PF01155 HypA > GO:nickel cation binding ; GO:0016151
Pfam:PF01155 HypA > GO:cellular protein modification process ; GO:0006464
Pfam:PF01157 Ribosomal_L21e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01157 Ribosomal_L21e > GO:translation ; GO:0006412
Pfam:PF01157 Ribosomal_L21e > GO:intracellular ; GO:0005622
Pfam:PF01157 Ribosomal_L21e > GO:ribosome ; GO:0005840
Pfam:PF01158 Ribosomal_L36e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01158 Ribosomal_L36e > GO:translation ; GO:0006412
Pfam:PF01158 Ribosomal_L36e > GO:intracellular ; GO:0005622
Pfam:PF01158 Ribosomal_L36e > GO:ribosome ; GO:0005840
Pfam:PF01159 Ribosomal_L6e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01159 Ribosomal_L6e > GO:translation ; GO:0006412
Pfam:PF01159 Ribosomal_L6e > GO:intracellular ; GO:0005622
Pfam:PF01159 Ribosomal_L6e > GO:ribosome ; GO:0005840
Pfam:PF01160 Opiods_neuropep > GO:neuropeptide signaling pathway ; GO:0007218
Pfam:PF01163 RIO1 > GO:catalytic activity ; GO:0003824
Pfam:PF01163 RIO1 > GO:ATP binding ; GO:0005524
Pfam:PF01165 Ribosomal_S21 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01165 Ribosomal_S21 > GO:translation ; GO:0006412
Pfam:PF01165 Ribosomal_S21 > GO:ribosome ; GO:0005840
Pfam:PF01166 TSC22 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF01166 TSC22 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01169 UPF0016 > GO:membrane ; GO:0016020
Pfam:PF01174 SNO > GO:transferase activity ; GO:0016740
Pfam:PF01174 SNO > GO:glutamine catabolic process ; GO:0006543
Pfam:PF01174 SNO > GO:pyridoxal phosphate biosynthetic process ; GO:0042823
Pfam:PF01175 Urocanase > GO:urocanate hydratase activity ; GO:0016153
Pfam:PF01176 eIF-1a > GO:RNA binding ; GO:0003723
Pfam:PF01176 eIF-1a > GO:translation initiation factor activity ; GO:0003743
Pfam:PF01176 eIF-1a > GO:translational initiation ; GO:0006413
Pfam:PF01177 Asp_Glu_race > GO:racemase activity, acting on amino acids and derivatives ; GO:0036361
Pfam:PF01177 Asp_Glu_race > GO:nitrogen compound metabolic process ; GO:0006807
Pfam:PF01179 Cu_amine_oxid > GO:copper ion binding ; GO:0005507
Pfam:PF01179 Cu_amine_oxid > GO:primary amine oxidase activity ; GO:0008131
Pfam:PF01179 Cu_amine_oxid > GO:quinone binding ; GO:0048038
Pfam:PF01179 Cu_amine_oxid > GO:amine metabolic process ; GO:0009308
Pfam:PF01179 Cu_amine_oxid > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01180 DHO_dh > GO:dihydroorotate dehydrogenase activity ; GO:0004152
Pfam:PF01180 DHO_dh > GO:UMP biosynthetic process ; GO:0006222
Pfam:PF01180 DHO_dh > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01182 Glucosamine_iso > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF01183 Glyco_hydro_25 > GO:lysozyme activity ; GO:0003796
Pfam:PF01183 Glyco_hydro_25 > GO:peptidoglycan catabolic process ; GO:0009253
Pfam:PF01183 Glyco_hydro_25 > GO:cell wall macromolecule catabolic process ; GO:0016998
Pfam:PF01184 Grp1_Fun34_YaaH > GO:membrane ; GO:0016020
Pfam:PF01185 Hydrophobin > GO:structural constituent of cell wall ; GO:0005199
Pfam:PF01185 Hydrophobin > GO:fungal-type cell wall ; GO:0009277
Pfam:PF01186 Lysyl_oxidase > GO:copper ion binding ; GO:0005507
Pfam:PF01186 Lysyl_oxidase > GO:oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor ; GO:0016641
Pfam:PF01186 Lysyl_oxidase > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01191 RNA_pol_Rpb5_C > GO:DNA binding ; GO:0003677
Pfam:PF01191 RNA_pol_Rpb5_C > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF01191 RNA_pol_Rpb5_C > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF01192 RNA_pol_Rpb6 > GO:DNA binding ; GO:0003677
Pfam:PF01192 RNA_pol_Rpb6 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF01192 RNA_pol_Rpb6 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF01193 RNA_pol_L > GO:protein dimerization activity ; GO:0046983
Pfam:PF01193 RNA_pol_L > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF01194 RNA_pol_N > GO:DNA binding ; GO:0003677
Pfam:PF01194 RNA_pol_N > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF01194 RNA_pol_N > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF01195 Pept_tRNA_hydro > GO:aminoacyl-tRNA hydrolase activity ; GO:0004045
Pfam:PF01196 Ribosomal_L17 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01196 Ribosomal_L17 > GO:translation ; GO:0006412
Pfam:PF01196 Ribosomal_L17 > GO:intracellular ; GO:0005622
Pfam:PF01196 Ribosomal_L17 > GO:ribosome ; GO:0005840
Pfam:PF01197 Ribosomal_L31 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01197 Ribosomal_L31 > GO:translation ; GO:0006412
Pfam:PF01197 Ribosomal_L31 > GO:intracellular ; GO:0005622
Pfam:PF01197 Ribosomal_L31 > GO:ribosome ; GO:0005840
Pfam:PF01198 Ribosomal_L31e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01198 Ribosomal_L31e > GO:translation ; GO:0006412
Pfam:PF01198 Ribosomal_L31e > GO:intracellular ; GO:0005622
Pfam:PF01198 Ribosomal_L31e > GO:ribosome ; GO:0005840
Pfam:PF01199 Ribosomal_L34e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01199 Ribosomal_L34e > GO:translation ; GO:0006412
Pfam:PF01199 Ribosomal_L34e > GO:intracellular ; GO:0005622
Pfam:PF01199 Ribosomal_L34e > GO:ribosome ; GO:0005840
Pfam:PF01200 Ribosomal_S28e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01200 Ribosomal_S28e > GO:translation ; GO:0006412
Pfam:PF01200 Ribosomal_S28e > GO:intracellular ; GO:0005622
Pfam:PF01200 Ribosomal_S28e > GO:ribosome ; GO:0005840
Pfam:PF01204 Trehalase > GO:alpha,alpha-trehalase activity ; GO:0004555
Pfam:PF01204 Trehalase > GO:trehalose metabolic process ; GO:0005991
Pfam:PF01207 Dus > GO:tRNA dihydrouridine synthase activity ; GO:0017150
Pfam:PF01207 Dus > GO:flavin adenine dinucleotide binding ; GO:0050660
Pfam:PF01207 Dus > GO:tRNA processing ; GO:0008033
Pfam:PF01207 Dus > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01208 URO-D > GO:uroporphyrinogen decarboxylase activity ; GO:0004853
Pfam:PF01208 URO-D > GO:porphyrin-containing compound biosynthetic process ; GO:0006779
Pfam:PF01209 Ubie_methyltran > GO:methyltransferase activity ; GO:0008168
Pfam:PF01210 NAD_Gly3P_dh_N > GO:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ; GO:0016616
Pfam:PF01210 NAD_Gly3P_dh_N > GO:NAD binding ; GO:0051287
Pfam:PF01210 NAD_Gly3P_dh_N > GO:glycerol-3-phosphate catabolic process ; GO:0046168
Pfam:PF01210 NAD_Gly3P_dh_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01210 NAD_Gly3P_dh_N > GO:cytoplasm ; GO:0005737
Pfam:PF01212 Beta_elim_lyase > GO:lyase activity ; GO:0016829
Pfam:PF01212 Beta_elim_lyase > GO:cellular amino acid metabolic process ; GO:0006520
Pfam:PF01213 CAP_N > GO:actin binding ; GO:0003779
Pfam:PF01213 CAP_N > GO:cytoskeleton organization ; GO:0007010
Pfam:PF01214 CK_II_beta > GO:protein kinase regulator activity ; GO:0019887
Pfam:PF01214 CK_II_beta > GO:protein kinase CK2 complex ; GO:0005956
Pfam:PF01215 COX5B > GO:cytochrome-c oxidase activity ; GO:0004129
Pfam:PF01215 COX5B > GO:mitochondrial envelope ; GO:0005740
Pfam:PF01216 Calsequestrin > GO:calcium ion binding ; GO:0005509
Pfam:PF01218 Coprogen_oxidas > GO:coproporphyrinogen oxidase activity ; GO:0004109
Pfam:PF01218 Coprogen_oxidas > GO:porphyrin-containing compound biosynthetic process ; GO:0006779
Pfam:PF01218 Coprogen_oxidas > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01219 DAGK_prokar > GO:diacylglycerol kinase activity ; GO:0004143
Pfam:PF01219 DAGK_prokar > GO:phospholipid biosynthetic process ; GO:0008654
Pfam:PF01219 DAGK_prokar > GO:membrane ; GO:0016020
Pfam:PF01220 DHquinase_II > GO:3-dehydroquinate dehydratase activity ; GO:0003855
Pfam:PF01221 Dynein_light > GO:microtubule-based process ; GO:0007017
Pfam:PF01221 Dynein_light > GO:microtubule associated complex ; GO:0005875
Pfam:PF01222 ERG4_ERG24 > GO:membrane ; GO:0016020
Pfam:PF01223 Endonuclease_NS > GO:nucleic acid binding ; GO:0003676
Pfam:PF01223 Endonuclease_NS > GO:hydrolase activity ; GO:0016787
Pfam:PF01223 Endonuclease_NS > GO:metal ion binding ; GO:0046872
Pfam:PF01225 Mur_ligase > GO:ATP binding ; GO:0005524
Pfam:PF01225 Mur_ligase > GO:biosynthetic process ; GO:0009058
Pfam:PF01226 Form_Nir_trans > GO:transporter activity ; GO:0005215
Pfam:PF01226 Form_Nir_trans > GO:transport ; GO:0006810
Pfam:PF01226 Form_Nir_trans > GO:membrane ; GO:0016020
Pfam:PF01228 Gly_radical > GO:catalytic activity ; GO:0003824
Pfam:PF01228 Gly_radical > GO:metabolic process ; GO:0008152
Pfam:PF01229 Glyco_hydro_39 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF01229 Glyco_hydro_39 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF01231 IDO > GO:heme binding ; GO:0020037
Pfam:PF01232 Mannitol_dh > GO:oxidoreductase activity ; GO:0016491
Pfam:PF01232 Mannitol_dh > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01233 NMT > GO:glycylpeptide N-tetradecanoyltransferase activity ; GO:0004379
Pfam:PF01234 NNMT_PNMT_TEMT > GO:methyltransferase activity ; GO:0008168
Pfam:PF01235 Na_Ala_symp > GO:alanine:sodium symporter activity ; GO:0015655
Pfam:PF01235 Na_Ala_symp > GO:sodium ion transport ; GO:0006814
Pfam:PF01235 Na_Ala_symp > GO:alanine transport ; GO:0032328
Pfam:PF01235 Na_Ala_symp > GO:membrane ; GO:0016020
Pfam:PF01238 PMI_typeI > GO:mannose-6-phosphate isomerase activity ; GO:0004476
Pfam:PF01238 PMI_typeI > GO:zinc ion binding ; GO:0008270
Pfam:PF01238 PMI_typeI > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF01239 PPTA > GO:protein prenyltransferase activity ; GO:0008318
Pfam:PF01239 PPTA > GO:protein prenylation ; GO:0018342
Pfam:PF01241 PSI_PSAK > GO:photosynthesis ; GO:0015979
Pfam:PF01241 PSI_PSAK > GO:photosystem I ; GO:0009522
Pfam:PF01241 PSI_PSAK > GO:membrane ; GO:0016020
Pfam:PF01243 Pyridox_oxidase > GO:pyridoxamine-phosphate oxidase activity ; GO:0004733
Pfam:PF01243 Pyridox_oxidase > GO:FMN binding ; GO:0010181
Pfam:PF01243 Pyridox_oxidase > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01244 Peptidase_M19 > GO:dipeptidase activity ; GO:0016805
Pfam:PF01244 Peptidase_M19 > GO:proteolysis ; GO:0006508
Pfam:PF01245 Ribosomal_L19 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01245 Ribosomal_L19 > GO:translation ; GO:0006412
Pfam:PF01245 Ribosomal_L19 > GO:intracellular ; GO:0005622
Pfam:PF01245 Ribosomal_L19 > GO:ribosome ; GO:0005840
Pfam:PF01247 Ribosomal_L35Ae > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01247 Ribosomal_L35Ae > GO:translation ; GO:0006412
Pfam:PF01247 Ribosomal_L35Ae > GO:intracellular ; GO:0005622
Pfam:PF01247 Ribosomal_L35Ae > GO:ribosome ; GO:0005840
Pfam:PF01249 Ribosomal_S21e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01249 Ribosomal_S21e > GO:translation ; GO:0006412
Pfam:PF01249 Ribosomal_S21e > GO:intracellular ; GO:0005622
Pfam:PF01249 Ribosomal_S21e > GO:ribosome ; GO:0005840
Pfam:PF01250 Ribosomal_S6 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01250 Ribosomal_S6 > GO:rRNA binding ; GO:0019843
Pfam:PF01250 Ribosomal_S6 > GO:translation ; GO:0006412
Pfam:PF01250 Ribosomal_S6 > GO:ribosome ; GO:0005840
Pfam:PF01251 Ribosomal_S7e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01251 Ribosomal_S7e > GO:translation ; GO:0006412
Pfam:PF01251 Ribosomal_S7e > GO:intracellular ; GO:0005622
Pfam:PF01251 Ribosomal_S7e > GO:ribosome ; GO:0005840
Pfam:PF01252 Peptidase_A8 > GO:aspartic-type endopeptidase activity ; GO:0004190
Pfam:PF01252 Peptidase_A8 > GO:proteolysis ; GO:0006508
Pfam:PF01252 Peptidase_A8 > GO:membrane ; GO:0016020
Pfam:PF01253 SUI1 > GO:translation initiation factor activity ; GO:0003743
Pfam:PF01253 SUI1 > GO:translational initiation ; GO:0006413
Pfam:PF01254 TP2 > GO:DNA binding ; GO:0003677
Pfam:PF01254 TP2 > GO:spermatogenesis ; GO:0007283
Pfam:PF01254 TP2 > GO:nucleosome ; GO:0000786
Pfam:PF01254 TP2 > GO:nucleus ; GO:0005634
Pfam:PF01255 Prenyltransf > GO:transferase activity, transferring alkyl or aryl (other than methyl) groups ; GO:0016765
Pfam:PF01258 zf-dskA_traR > GO:zinc ion binding ; GO:0008270
Pfam:PF01263 Aldose_epim > GO:isomerase activity ; GO:0016853
Pfam:PF01263 Aldose_epim > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF01264 Chorismate_synt > GO:chorismate synthase activity ; GO:0004107
Pfam:PF01264 Chorismate_synt > GO:aromatic amino acid family biosynthetic process ; GO:0009073
Pfam:PF01265 Cyto_heme_lyase > GO:holocytochrome-c synthase activity ; GO:0004408
Pfam:PF01265 Cyto_heme_lyase > GO:mitochondrion ; GO:0005739
Pfam:PF01266 DAO > GO:oxidoreductase activity ; GO:0016491
Pfam:PF01266 DAO > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01267 F-actin_cap_A > GO:actin binding ; GO:0003779
Pfam:PF01267 F-actin_cap_A > GO:actin cytoskeleton organization ; GO:0030036
Pfam:PF01267 F-actin_cap_A > GO:F-actin capping protein complex ; GO:0008290
Pfam:PF01267 F-actin_cap_A > GO:WASH complex ; GO:0071203
Pfam:PF01268 FTHFS > GO:formate-tetrahydrofolate ligase activity ; GO:0004329
Pfam:PF01268 FTHFS > GO:ATP binding ; GO:0005524
Pfam:PF01268 FTHFS > GO:folic acid-containing compound biosynthetic process ; GO:0009396
Pfam:PF01269 Fibrillarin > GO:RNA binding ; GO:0003723
Pfam:PF01269 Fibrillarin > GO:methyltransferase activity ; GO:0008168
Pfam:PF01269 Fibrillarin > GO:rRNA processing ; GO:0006364
Pfam:PF01269 Fibrillarin > GO:tRNA processing ; GO:0008033
Pfam:PF01270 Glyco_hydro_8 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF01270 Glyco_hydro_8 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF01271 Granin > GO:secretory granule ; GO:0030141
Pfam:PF01272 GreA_GreB > GO:DNA binding ; GO:0003677
Pfam:PF01272 GreA_GreB > GO:regulation of DNA-templated transcription, elongation ; GO:0032784
Pfam:PF01273 LBP_BPI_CETP > GO:lipid binding ; GO:0008289
Pfam:PF01274 Malate_synthase > GO:malate synthase activity ; GO:0004474
Pfam:PF01274 Malate_synthase > GO:glyoxylate cycle ; GO:0006097
Pfam:PF01275 Myelin_PLP > GO:integral component of membrane ; GO:0016021
Pfam:PF01276 OKR_DC_1 > GO:catalytic activity ; GO:0003824
Pfam:PF01277 Oleosin > GO:monolayer-surrounded lipid storage body ; GO:0012511
Pfam:PF01277 Oleosin > GO:integral component of membrane ; GO:0016021
Pfam:PF01278 Omptin > GO:endopeptidase activity ; GO:0004175
Pfam:PF01278 Omptin > GO:proteolysis ; GO:0006508
Pfam:PF01278 Omptin > GO:cell outer membrane ; GO:0009279
Pfam:PF01279 Parathyroid > GO:hormone activity ; GO:0005179
Pfam:PF01279 Parathyroid > GO:extracellular region ; GO:0005576
Pfam:PF01280 Ribosomal_L19e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01280 Ribosomal_L19e > GO:translation ; GO:0006412
Pfam:PF01280 Ribosomal_L19e > GO:intracellular ; GO:0005622
Pfam:PF01280 Ribosomal_L19e > GO:ribosome ; GO:0005840
Pfam:PF01282 Ribosomal_S24e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01282 Ribosomal_S24e > GO:translation ; GO:0006412
Pfam:PF01282 Ribosomal_S24e > GO:intracellular ; GO:0005622
Pfam:PF01282 Ribosomal_S24e > GO:ribosome ; GO:0005840
Pfam:PF01283 Ribosomal_S26e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01283 Ribosomal_S26e > GO:translation ; GO:0006412
Pfam:PF01283 Ribosomal_S26e > GO:intracellular ; GO:0005622
Pfam:PF01283 Ribosomal_S26e > GO:ribosome ; GO:0005840
Pfam:PF01284 MARVEL > GO:membrane ; GO:0016020
Pfam:PF01285 TEA > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF01285 TEA > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01285 TEA > GO:nucleus ; GO:0005634
Pfam:PF01287 eIF-5a > GO:RNA binding ; GO:0003723
Pfam:PF01287 eIF-5a > GO:translation elongation factor activity ; GO:0003746
Pfam:PF01287 eIF-5a > GO:ribosome binding ; GO:0043022
Pfam:PF01287 eIF-5a > GO:translational frameshifting ; GO:0006452
Pfam:PF01287 eIF-5a > GO:positive regulation of translational elongation ; GO:0045901
Pfam:PF01287 eIF-5a > GO:positive regulation of translational termination ; GO:0045905
Pfam:PF01288 HPPK > GO:2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity ; GO:0003848
Pfam:PF01288 HPPK > GO:folic acid-containing compound biosynthetic process ; GO:0009396
Pfam:PF01289 Thiol_cytolysin > GO:cholesterol binding ; GO:0015485
Pfam:PF01289 Thiol_cytolysin > GO:pathogenesis ; GO:0009405
Pfam:PF01290 Thymosin > GO:actin binding ; GO:0003779
Pfam:PF01290 Thymosin > GO:cytoskeleton organization ; GO:0007010
Pfam:PF01290 Thymosin > GO:cytoplasm ; GO:0005737
Pfam:PF01291 LIF_OSM > GO:cytokine activity ; GO:0005125
Pfam:PF01291 LIF_OSM > GO:immune response ; GO:0006955
Pfam:PF01291 LIF_OSM > GO:extracellular region ; GO:0005576
Pfam:PF01292 Ni_hydr_CYTB > GO:electron carrier activity ; GO:0009055
Pfam:PF01292 Ni_hydr_CYTB > GO:integral component of membrane ; GO:0016021
Pfam:PF01293 PEPCK_ATP > GO:phosphoenolpyruvate carboxykinase (ATP) activity ; GO:0004612
Pfam:PF01293 PEPCK_ATP > GO:ATP binding ; GO:0005524
Pfam:PF01293 PEPCK_ATP > GO:gluconeogenesis ; GO:0006094
Pfam:PF01294 Ribosomal_L13e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01294 Ribosomal_L13e > GO:translation ; GO:0006412
Pfam:PF01294 Ribosomal_L13e > GO:intracellular ; GO:0005622
Pfam:PF01294 Ribosomal_L13e > GO:ribosome ; GO:0005840
Pfam:PF01295 Adenylate_cycl > GO:adenylate cyclase activity ; GO:0004016
Pfam:PF01295 Adenylate_cycl > GO:cAMP biosynthetic process ; GO:0006171
Pfam:PF01296 Galanin > GO:hormone activity ; GO:0005179
Pfam:PF01296 Galanin > GO:extracellular region ; GO:0005576
Pfam:PF01297 TroA > GO:metal ion binding ; GO:0046872
Pfam:PF01297 TroA > GO:metal ion transport ; GO:0030001
Pfam:PF01298 Lipoprotein_5 > GO:membrane ; GO:0016020
Pfam:PF01299 Lamp > GO:membrane ; GO:0016020
Pfam:PF01300 Sua5_yciO_yrdC > GO:double-stranded RNA binding ; GO:0003725
Pfam:PF01301 Glyco_hydro_35 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF01301 Glyco_hydro_35 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF01303 Egg_lysin > GO:single fertilization ; GO:0007338
Pfam:PF01304 Gas_vesicle_C > GO:gas vesicle organization ; GO:0031412
Pfam:PF01304 Gas_vesicle_C > GO:gas vesicle ; GO:0031411
Pfam:PF01306 LacY_symp > GO:transport ; GO:0006810
Pfam:PF01306 LacY_symp > GO:membrane ; GO:0016020
Pfam:PF01310 Adeno_PVIII > GO:hexon binding ; GO:0031423
Pfam:PF01311 Bac_export_1 > GO:protein targeting ; GO:0006605
Pfam:PF01311 Bac_export_1 > GO:membrane ; GO:0016020
Pfam:PF01312 Bac_export_2 > GO:protein secretion ; GO:0009306
Pfam:PF01312 Bac_export_2 > GO:membrane ; GO:0016020
Pfam:PF01313 Bac_export_3 > GO:protein secretion ; GO:0009306
Pfam:PF01313 Bac_export_3 > GO:membrane ; GO:0016020
Pfam:PF01314 AFOR_C > GO:electron carrier activity ; GO:0009055
Pfam:PF01314 AFOR_C > GO:oxidoreductase activity ; GO:0016491
Pfam:PF01314 AFOR_C > GO:oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor ; GO:0016625
Pfam:PF01314 AFOR_C > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF01314 AFOR_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01316 Arg_repressor > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF01316 Arg_repressor > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01316 Arg_repressor > GO:arginine metabolic process ; GO:0006525
Pfam:PF01318 Bromo_coat > GO:structural molecule activity ; GO:0005198
Pfam:PF01318 Bromo_coat > GO:viral capsid ; GO:0019028
Pfam:PF01320 Colicin_Pyocin > GO:toxic substance binding ; GO:0015643
Pfam:PF01321 Creatinase_N > GO:hydrolase activity ; GO:0016787
Pfam:PF01322 Cytochrom_C_2 > GO:iron ion binding ; GO:0005506
Pfam:PF01322 Cytochrom_C_2 > GO:electron carrier activity ; GO:0009055
Pfam:PF01322 Cytochrom_C_2 > GO:heme binding ; GO:0020037
Pfam:PF01323 DSBA > GO:protein disulfide oxidoreductase activity ; GO:0015035
Pfam:PF01325 Fe_dep_repress > GO:DNA binding ; GO:0003677
Pfam:PF01326 PPDK_N > GO:ATP binding ; GO:0005524
Pfam:PF01326 PPDK_N > GO:kinase activity ; GO:0016301
Pfam:PF01326 PPDK_N > GO:phosphorylation ; GO:0016310
Pfam:PF01328 Peroxidase_2 > GO:peroxidase activity ; GO:0004601
Pfam:PF01329 Pterin_4a > GO:4-alpha-hydroxytetrahydrobiopterin dehydratase activity ; GO:0008124
Pfam:PF01329 Pterin_4a > GO:tetrahydrobiopterin biosynthetic process ; GO:0006729
Pfam:PF01330 RuvA_N > GO:ATP binding ; GO:0005524
Pfam:PF01330 RuvA_N > GO:four-way junction helicase activity ; GO:0009378
Pfam:PF01330 RuvA_N > GO:DNA repair ; GO:0006281
Pfam:PF01330 RuvA_N > GO:DNA recombination ; GO:0006310
Pfam:PF01331 mRNA_cap_enzyme > GO:mRNA guanylyltransferase activity ; GO:0004484
Pfam:PF01331 mRNA_cap_enzyme > GO:7-methylguanosine mRNA capping ; GO:0006370
Pfam:PF01331 mRNA_cap_enzyme > GO:mRNA processing ; GO:0006397
Pfam:PF01333 Apocytochr_F_C > GO:iron ion binding ; GO:0005506
Pfam:PF01333 Apocytochr_F_C > GO:electron carrier activity ; GO:0009055
Pfam:PF01333 Apocytochr_F_C > GO:heme binding ; GO:0020037
Pfam:PF01333 Apocytochr_F_C > GO:photosynthesis ; GO:0015979
Pfam:PF01333 Apocytochr_F_C > GO:integral component of thylakoid membrane ; GO:0031361
Pfam:PF01335 DED > GO:protein binding ; GO:0005515
Pfam:PF01335 DED > GO:regulation of apoptotic process ; GO:0042981
Pfam:PF01336 tRNA_anti-codon > GO:nucleic acid binding ; GO:0003676
Pfam:PF01338 Bac_thur_toxin > GO:pathogenesis ; GO:0009405
Pfam:PF01338 Bac_thur_toxin > GO:extracellular region ; GO:0005576
Pfam:PF01339 CheB_methylest > GO:phosphorelay response regulator activity ; GO:0000156
Pfam:PF01339 CheB_methylest > GO:protein-glutamate methylesterase activity ; GO:0008984
Pfam:PF01339 CheB_methylest > GO:phosphorelay signal transduction system ; GO:0000160
Pfam:PF01339 CheB_methylest > GO:chemotaxis ; GO:0006935
Pfam:PF01339 CheB_methylest > GO:cytoplasm ; GO:0005737
Pfam:PF01340 MetJ > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF01340 MetJ > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01340 MetJ > GO:methionine metabolic process ; GO:0006555
Pfam:PF01341 Glyco_hydro_6 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF01341 Glyco_hydro_6 > GO:cellulose catabolic process ; GO:0030245
Pfam:PF01342 SAND > GO:DNA binding ; GO:0003677
Pfam:PF01343 Peptidase_S49 > GO:peptidase activity ; GO:0008233
Pfam:PF01343 Peptidase_S49 > GO:proteolysis ; GO:0006508
Pfam:PF01344 Kelch_1 > GO:protein binding ; GO:0005515
Pfam:PF01345 DUF11 > GO:extrachromosomal circular DNA ; GO:0005727
Pfam:PF01346 FKBP_N > GO:protein folding ; GO:0006457
Pfam:PF01347 Vitellogenin_N > GO:lipid transporter activity ; GO:0005319
Pfam:PF01347 Vitellogenin_N > GO:lipid transport ; GO:0006869
Pfam:PF01348 Intron_maturas2 > GO:mRNA processing ; GO:0006397
Pfam:PF01349 Flavi_NS4B > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF01349 Flavi_NS4B > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF01349 Flavi_NS4B > GO:mRNA (guanine-N7-)-methyltransferase activity ; GO:0004482
Pfam:PF01349 Flavi_NS4B > GO:mRNA (nucleoside-2'-O-)-methyltransferase activity ; GO:0004483
Pfam:PF01349 Flavi_NS4B > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF01349 Flavi_NS4B > GO:nucleoside-triphosphatase activity ; GO:0017111
Pfam:PF01349 Flavi_NS4B > GO:serine-type exopeptidase activity ; GO:0070008
Pfam:PF01350 Flavi_NS4A > GO:viral process ; GO:0016032
Pfam:PF01350 Flavi_NS4A > GO:RNA metabolic process ; GO:0016070
Pfam:PF01350 Flavi_NS4A > GO:virion ; GO:0019012
Pfam:PF01352 KRAB > GO:nucleic acid binding ; GO:0003676
Pfam:PF01352 KRAB > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01352 KRAB > GO:intracellular ; GO:0005622
Pfam:PF01353 GFP > GO:bioluminescence ; GO:0008218
Pfam:PF01355 HIPIP > GO:electron carrier activity ; GO:0009055
Pfam:PF01355 HIPIP > GO:aerobic electron transport chain ; GO:0019646
Pfam:PF01356 A_amylase_inhib > GO:alpha-amylase inhibitor activity ; GO:0015066
Pfam:PF01361 Tautomerase > GO:isomerase activity ; GO:0016853
Pfam:PF01361 Tautomerase > GO:cellular aromatic compound metabolic process ; GO:0006725
Pfam:PF01363 FYVE > GO:metal ion binding ; GO:0046872
Pfam:PF01364 Peptidase_C25 > GO:cysteine-type peptidase activity ; GO:0008234
Pfam:PF01364 Peptidase_C25 > GO:proteolysis ; GO:0006508
Pfam:PF01365 RYDR_ITPR > GO:calcium channel activity ; GO:0005262
Pfam:PF01365 RYDR_ITPR > GO:calcium ion transmembrane transport ; GO:0070588
Pfam:PF01365 RYDR_ITPR > GO:membrane ; GO:0016020
Pfam:PF01366 PRTP > GO:protein transporter activity ; GO:0008565
Pfam:PF01366 PRTP > GO:protein processing ; GO:0016485
Pfam:PF01366 PRTP > GO:viral capsid assembly ; GO:0019069
Pfam:PF01367 5_3_exonuc > GO:DNA binding ; GO:0003677
Pfam:PF01367 5_3_exonuc > GO:catalytic activity ; GO:0003824
Pfam:PF01369 Sec7 > GO:ARF guanyl-nucleotide exchange factor activity ; GO:0005086
Pfam:PF01369 Sec7 > GO:regulation of ARF protein signal transduction ; GO:0032012
Pfam:PF01370 Epimerase > GO:catalytic activity ; GO:0003824
Pfam:PF01370 Epimerase > GO:coenzyme binding ; GO:0050662
Pfam:PF01371 Trp_repressor > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF01371 Trp_repressor > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01371 Trp_repressor > GO:intracellular ; GO:0005622
Pfam:PF01372 Melittin > GO:protein kinase inhibitor activity ; GO:0004860
Pfam:PF01372 Melittin > GO:extracellular region ; GO:0005576
Pfam:PF01373 Glyco_hydro_14 > GO:beta-amylase activity ; GO:0016161
Pfam:PF01373 Glyco_hydro_14 > GO:polysaccharide catabolic process ; GO:0000272
Pfam:PF01374 Glyco_hydro_46 > GO:chitosanase activity ; GO:0016977
Pfam:PF01374 Glyco_hydro_46 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF01374 Glyco_hydro_46 > GO:extracellular region ; GO:0005576
Pfam:PF01375 Enterotoxin_a > GO:catalytic activity ; GO:0003824
Pfam:PF01375 Enterotoxin_a > GO:pathogenesis ; GO:0009405
Pfam:PF01375 Enterotoxin_a > GO:extracellular region ; GO:0005576
Pfam:PF01376 Enterotoxin_b > GO:pathogenesis ; GO:0009405
Pfam:PF01376 Enterotoxin_b > GO:extracellular region ; GO:0005576
Pfam:PF01378 IgG_binding_B > GO:cell wall ; GO:0005618
Pfam:PF01379 Porphobil_deam > GO:hydroxymethylbilane synthase activity ; GO:0004418
Pfam:PF01379 Porphobil_deam > GO:tetrapyrrole biosynthetic process ; GO:0033014
Pfam:PF01380 SIS > GO:carbohydrate binding ; GO:0030246
Pfam:PF01380 SIS > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF01381 HTH_3 > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF01383 CpcD > GO:phycobilisome ; GO:0030089
Pfam:PF01384 PHO4 > GO:inorganic phosphate transmembrane transporter activity ; GO:0005315
Pfam:PF01384 PHO4 > GO:phosphate ion transport ; GO:0006817
Pfam:PF01384 PHO4 > GO:membrane ; GO:0016020
Pfam:PF01386 Ribosomal_L25p > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01386 Ribosomal_L25p > GO:5S rRNA binding ; GO:0008097
Pfam:PF01386 Ribosomal_L25p > GO:translation ; GO:0006412
Pfam:PF01386 Ribosomal_L25p > GO:ribosome ; GO:0005840
Pfam:PF01388 ARID > GO:DNA binding ; GO:0003677
Pfam:PF01388 ARID > GO:intracellular ; GO:0005622
Pfam:PF01389 OmpA_membrane > GO:cell outer membrane ; GO:0009279
Pfam:PF01389 OmpA_membrane > GO:integral component of membrane ; GO:0016021
Pfam:PF01392 Fz > GO:protein binding ; GO:0005515
Pfam:PF01393 Chromo_shadow > GO:nucleus ; GO:0005634
Pfam:PF01395 PBP_GOBP > GO:odorant binding ; GO:0005549
Pfam:PF01396 zf-C4_Topoisom > GO:DNA binding ; GO:0003677
Pfam:PF01396 zf-C4_Topoisom > GO:DNA topoisomerase activity ; GO:0003916
Pfam:PF01396 zf-C4_Topoisom > GO:DNA topological change ; GO:0006265
Pfam:PF01396 zf-C4_Topoisom > GO:chromosome ; GO:0005694
Pfam:PF01397 Terpene_synth > GO:terpene synthase activity ; GO:0010333
Pfam:PF01397 Terpene_synth > GO:lyase activity ; GO:0016829
Pfam:PF01397 Terpene_synth > GO:metabolic process ; GO:0008152
Pfam:PF01398 JAB > GO:protein binding ; GO:0005515
Pfam:PF01399 PCI > GO:protein binding ; GO:0005515
Pfam:PF01400 Astacin > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF01400 Astacin > GO:proteolysis ; GO:0006508
Pfam:PF01401 Peptidase_M2 > GO:metallopeptidase activity ; GO:0008237
Pfam:PF01401 Peptidase_M2 > GO:peptidyl-dipeptidase activity ; GO:0008241
Pfam:PF01401 Peptidase_M2 > GO:proteolysis ; GO:0006508
Pfam:PF01401 Peptidase_M2 > GO:membrane ; GO:0016020
Pfam:PF01402 RHH_1 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01403 Sema > GO:protein binding ; GO:0005515
Pfam:PF01404 Ephrin_lbd > GO:ephrin receptor signaling pathway ; GO:0048013
Pfam:PF01405 PsbT > GO:photosynthesis ; GO:0015979
Pfam:PF01405 PsbT > GO:photosystem II ; GO:0009523
Pfam:PF01405 PsbT > GO:photosystem II reaction center ; GO:0009539
Pfam:PF01405 PsbT > GO:membrane ; GO:0016020
Pfam:PF01407 Gemini_AL3 > GO:viral process ; GO:0016032
Pfam:PF01408 GFO_IDH_MocA > GO:oxidoreductase activity ; GO:0016491
Pfam:PF01409 tRNA-synt_2d > GO:tRNA binding ; GO:0000049
Pfam:PF01409 tRNA-synt_2d > GO:aminoacyl-tRNA ligase activity ; GO:0004812
Pfam:PF01409 tRNA-synt_2d > GO:ATP binding ; GO:0005524
Pfam:PF01409 tRNA-synt_2d > GO:tRNA aminoacylation ; GO:0043039
Pfam:PF01409 tRNA-synt_2d > GO:cytoplasm ; GO:0005737
Pfam:PF01410 COLFI > GO:extracellular matrix structural constituent ; GO:0005201
Pfam:PF01410 COLFI > GO:collagen trimer ; GO:0005581
Pfam:PF01411 tRNA-synt_2c > GO:nucleotide binding ; GO:0000166
Pfam:PF01411 tRNA-synt_2c > GO:alanine-tRNA ligase activity ; GO:0004813
Pfam:PF01411 tRNA-synt_2c > GO:ATP binding ; GO:0005524
Pfam:PF01411 tRNA-synt_2c > GO:alanyl-tRNA aminoacylation ; GO:0006419
Pfam:PF01412 ArfGap > GO:ARF GTPase activator activity ; GO:0008060
Pfam:PF01412 ArfGap > GO:zinc ion binding ; GO:0008270
Pfam:PF01412 ArfGap > GO:regulation of ARF GTPase activity ; GO:0032312
Pfam:PF01413 C4 > GO:extracellular matrix structural constituent ; GO:0005201
Pfam:PF01413 C4 > GO:collagen trimer ; GO:0005581
Pfam:PF01414 DSL > GO:cell communication ; GO:0007154
Pfam:PF01414 DSL > GO:membrane ; GO:0016020
Pfam:PF01415 IL7 > GO:cytokine receptor binding ; GO:0005126
Pfam:PF01415 IL7 > GO:growth factor activity ; GO:0008083
Pfam:PF01415 IL7 > GO:immune response ; GO:0006955
Pfam:PF01415 IL7 > GO:extracellular region ; GO:0005576
Pfam:PF01416 PseudoU_synth_1 > GO:RNA binding ; GO:0003723
Pfam:PF01416 PseudoU_synth_1 > GO:pseudouridine synthase activity ; GO:0009982
Pfam:PF01416 PseudoU_synth_1 > GO:pseudouridine synthesis ; GO:0001522
Pfam:PF01416 PseudoU_synth_1 > GO:RNA modification ; GO:0009451
Pfam:PF01418 HTH_6 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF01418 HTH_6 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01420 Methylase_S > GO:DNA binding ; GO:0003677
Pfam:PF01420 Methylase_S > GO:DNA modification ; GO:0006304
Pfam:PF01421 Reprolysin > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF01421 Reprolysin > GO:proteolysis ; GO:0006508
Pfam:PF01422 zf-NF-X1 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF01422 zf-NF-X1 > GO:zinc ion binding ; GO:0008270
Pfam:PF01422 zf-NF-X1 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01422 zf-NF-X1 > GO:nucleus ; GO:0005634
Pfam:PF01424 R3H > GO:nucleic acid binding ; GO:0003676
Pfam:PF01425 Amidase > GO:carbon-nitrogen ligase activity, with glutamine as amido-N-donor ; GO:0016884
Pfam:PF01426 BAH > GO:chromatin binding ; GO:0003682
Pfam:PF01427 Peptidase_M15 > GO:metallopeptidase activity ; GO:0008237
Pfam:PF01427 Peptidase_M15 > GO:dipeptidase activity ; GO:0016805
Pfam:PF01427 Peptidase_M15 > GO:proteolysis ; GO:0006508
Pfam:PF01427 Peptidase_M15 > GO:cell wall ; GO:0005618
Pfam:PF01428 zf-AN1 > GO:zinc ion binding ; GO:0008270
Pfam:PF01429 MBD > GO:DNA binding ; GO:0003677
Pfam:PF01429 MBD > GO:nucleus ; GO:0005634
Pfam:PF01430 HSP33 > GO:unfolded protein binding ; GO:0051082
Pfam:PF01430 HSP33 > GO:protein folding ; GO:0006457
Pfam:PF01430 HSP33 > GO:cytoplasm ; GO:0005737
Pfam:PF01431 Peptidase_M13 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF01431 Peptidase_M13 > GO:proteolysis ; GO:0006508
Pfam:PF01432 Peptidase_M3 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF01432 Peptidase_M3 > GO:proteolysis ; GO:0006508
Pfam:PF01433 Peptidase_M1 > GO:metallopeptidase activity ; GO:0008237
Pfam:PF01433 Peptidase_M1 > GO:zinc ion binding ; GO:0008270
Pfam:PF01434 Peptidase_M41 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF01434 Peptidase_M41 > GO:ATP binding ; GO:0005524
Pfam:PF01434 Peptidase_M41 > GO:proteolysis ; GO:0006508
Pfam:PF01435 Peptidase_M48 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF01435 Peptidase_M48 > GO:proteolysis ; GO:0006508
Pfam:PF01435 Peptidase_M48 > GO:membrane ; GO:0016020
Pfam:PF01436 NHL > GO:protein binding ; GO:0005515
Pfam:PF01437 PSI > GO:membrane ; GO:0016020
Pfam:PF01439 Metallothio_2 > GO:metal ion binding ; GO:0046872
Pfam:PF01440 Gemini_AL2 > GO:structural molecule activity ; GO:0005198
Pfam:PF01440 Gemini_AL2 > GO:viral capsid ; GO:0019028
Pfam:PF01441 Lipoprotein_6 > GO:defense response ; GO:0006952
Pfam:PF01441 Lipoprotein_6 > GO:cell outer membrane ; GO:0009279
Pfam:PF01442 Apolipoprotein > GO:lipid binding ; GO:0008289
Pfam:PF01442 Apolipoprotein > GO:lipid transport ; GO:0006869
Pfam:PF01442 Apolipoprotein > GO:lipoprotein metabolic process ; GO:0042157
Pfam:PF01442 Apolipoprotein > GO:extracellular region ; GO:0005576
Pfam:PF01443 Viral_helicase1 > GO:ATP binding ; GO:0005524
Pfam:PF01445 SH > GO:membrane ; GO:0016020
Pfam:PF01446 Rep_1 > GO:DNA binding ; GO:0003677
Pfam:PF01446 Rep_1 > GO:DNA replication ; GO:0006260
Pfam:PF01446 Rep_1 > GO:extrachromosomal circular DNA ; GO:0005727
Pfam:PF01447 Peptidase_M4 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF01450 IlvC > GO:ketol-acid reductoisomerase activity ; GO:0004455
Pfam:PF01450 IlvC > GO:branched-chain amino acid biosynthetic process ; GO:0009082
Pfam:PF01450 IlvC > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01457 Peptidase_M8 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF01457 Peptidase_M8 > GO:proteolysis ; GO:0006508
Pfam:PF01457 Peptidase_M8 > GO:cell adhesion ; GO:0007155
Pfam:PF01457 Peptidase_M8 > GO:membrane ; GO:0016020
Pfam:PF01458 UPF0051 > GO:iron-sulfur cluster assembly ; GO:0016226
Pfam:PF01459 Porin_3 > GO:transmembrane transport ; GO:0055085
Pfam:PF01459 Porin_3 > GO:mitochondrial outer membrane ; GO:0005741
Pfam:PF01465 GRIP > GO:protein binding ; GO:0005515
Pfam:PF01465 GRIP > GO:protein targeting to Golgi ; GO:0000042
Pfam:PF01466 Skp1 > GO:ubiquitin-dependent protein catabolic process ; GO:0006511
Pfam:PF01467 CTP_transf_2 > GO:catalytic activity ; GO:0003824
Pfam:PF01467 CTP_transf_2 > GO:biosynthetic process ; GO:0009058
Pfam:PF01468 GA > GO:pathogenesis ; GO:0009405
Pfam:PF01472 PUA > GO:RNA binding ; GO:0003723
Pfam:PF01474 DAHP_synth_2 > GO:3-deoxy-7-phosphoheptulonate synthase activity ; GO:0003849
Pfam:PF01474 DAHP_synth_2 > GO:aromatic amino acid family biosynthetic process ; GO:0009073
Pfam:PF01475 FUR > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF01475 FUR > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01477 PLAT > GO:protein binding ; GO:0005515
Pfam:PF01478 Peptidase_A24 > GO:aspartic-type endopeptidase activity ; GO:0004190
Pfam:PF01478 Peptidase_A24 > GO:membrane ; GO:0016020
Pfam:PF01479 S4 > GO:RNA binding ; GO:0003723
Pfam:PF01480 PWI > GO:mRNA processing ; GO:0006397
Pfam:PF01481 Arteri_nucleo > GO:viral nucleocapsid ; GO:0019013
Pfam:PF01483 P_proprotein > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF01483 P_proprotein > GO:proteolysis ; GO:0006508
Pfam:PF01484 Col_cuticle_N > GO:structural constituent of cuticle ; GO:0042302
Pfam:PF01485 IBR > GO:zinc ion binding ; GO:0008270
Pfam:PF01486 K-box > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF01486 K-box > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01486 K-box > GO:nucleus ; GO:0005634
Pfam:PF01487 DHquinase_I > GO:3-dehydroquinate dehydratase activity ; GO:0003855
Pfam:PF01491 Frataxin_Cyay > GO:ferric iron binding ; GO:0008199
Pfam:PF01491 Frataxin_Cyay > GO:iron-sulfur cluster assembly ; GO:0016226
Pfam:PF01493 GXGXG > GO:oxidoreductase activity ; GO:0016491
Pfam:PF01493 GXGXG > GO:metabolic process ; GO:0008152
Pfam:PF01493 GXGXG > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01496 V_ATPase_I > GO:hydrogen ion transmembrane transporter activity ; GO:0015078
Pfam:PF01496 V_ATPase_I > GO:ATP hydrolysis coupled proton transport ; GO:0015991
Pfam:PF01496 V_ATPase_I > GO:proton-transporting V-type ATPase, V0 domain ; GO:0033179
Pfam:PF01497 Peripla_BP_2 > GO:binding ; GO:0005488
Pfam:PF01498 HTH_Tnp_Tc3_2 > GO:DNA binding ; GO:0003677
Pfam:PF01498 HTH_Tnp_Tc3_2 > GO:transposase activity ; GO:0004803
Pfam:PF01498 HTH_Tnp_Tc3_2 > GO:transposition, DNA-mediated ; GO:0006313
Pfam:PF01498 HTH_Tnp_Tc3_2 > GO:DNA integration ; GO:0015074
Pfam:PF01499 Herpes_UL25 > GO:viral genome packaging ; GO:0019072
Pfam:PF01499 Herpes_UL25 > GO:host cell nucleus ; GO:0042025
Pfam:PF01500 Keratin_B2 > GO:keratin filament ; GO:0045095
Pfam:PF01501 Glyco_transf_8 > GO:transferase activity, transferring glycosyl groups ; GO:0016757
Pfam:PF01502 PRA-CH > GO:phosphoribosyl-AMP cyclohydrolase activity ; GO:0004635
Pfam:PF01502 PRA-CH > GO:histidine biosynthetic process ; GO:0000105
Pfam:PF01504 PIP5K > GO:phosphatidylinositol phosphate kinase activity ; GO:0016307
Pfam:PF01504 PIP5K > GO:phosphatidylinositol metabolic process ; GO:0046488
Pfam:PF01506 HCV_NS5a > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF01506 HCV_NS5a > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF01506 HCV_NS5a > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF01506 HCV_NS5a > GO:nucleoside-triphosphatase activity ; GO:0017111
Pfam:PF01507 PAPS_reduct > GO:catalytic activity ; GO:0003824
Pfam:PF01507 PAPS_reduct > GO:metabolic process ; GO:0008152
Pfam:PF01509 TruB_N > GO:RNA processing ; GO:0006396
Pfam:PF01510 Amidase_2 > GO:N-acetylmuramoyl-L-alanine amidase activity ; GO:0008745
Pfam:PF01510 Amidase_2 > GO:peptidoglycan catabolic process ; GO:0009253
Pfam:PF01512 Complex1_51K > GO:oxidoreductase activity, acting on NAD(P)H ; GO:0016651
Pfam:PF01512 Complex1_51K > GO:4 iron, 4 sulfur cluster binding ; GO:0051539
Pfam:PF01513 NAD_kinase > GO:NAD+ kinase activity ; GO:0003951
Pfam:PF01513 NAD_kinase > GO:NADP biosynthetic process ; GO:0006741
Pfam:PF01513 NAD_kinase > GO:metabolic process ; GO:0008152
Pfam:PF01515 PTA_PTB > GO:transferase activity, transferring acyl groups ; GO:0016746
Pfam:PF01515 PTA_PTB > GO:metabolic process ; GO:0008152
Pfam:PF01516 Orbi_VP6 > GO:structural molecule activity ; GO:0005198
Pfam:PF01516 Orbi_VP6 > GO:viral capsid ; GO:0019028
Pfam:PF01517 HDV_ag > GO:RNA binding ; GO:0003723
Pfam:PF01517 HDV_ag > GO:host cell nucleus ; GO:0042025
Pfam:PF01518 PolyG_pol > GO:single-stranded RNA binding ; GO:0003727
Pfam:PF01518 PolyG_pol > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF01520 Amidase_3 > GO:N-acetylmuramoyl-L-alanine amidase activity ; GO:0008745
Pfam:PF01520 Amidase_3 > GO:peptidoglycan catabolic process ; GO:0009253
Pfam:PF01522 Polysacc_deac_1 > GO:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds ; GO:0016810
Pfam:PF01522 Polysacc_deac_1 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF01524 Gemini_V1 > GO:modulation by virus of host morphology or physiology ; GO:0019048
Pfam:PF01524 Gemini_V1 > GO:negative regulation of gene silencing by RNA ; GO:0060967
Pfam:PF01524 Gemini_V1 > GO:host cell cytoplasm ; GO:0030430
Pfam:PF01525 Rota_NS26 > GO:magnesium ion binding ; GO:0000287
Pfam:PF01525 Rota_NS26 > GO:ATPase activity ; GO:0016887
Pfam:PF01525 Rota_NS26 > GO:ATP catabolic process ; GO:0006200
Pfam:PF01525 Rota_NS26 > GO:viral genome replication ; GO:0019079
Pfam:PF01525 Rota_NS26 > GO:host cell cytoplasm ; GO:0030430
Pfam:PF01526 DDE_Tnp_Tn3 > GO:transposase activity ; GO:0004803
Pfam:PF01526 DDE_Tnp_Tn3 > GO:transposition, DNA-mediated ; GO:0006313
Pfam:PF01527 HTH_Tnp_1 > GO:DNA binding ; GO:0003677
Pfam:PF01527 HTH_Tnp_1 > GO:transposase activity ; GO:0004803
Pfam:PF01527 HTH_Tnp_1 > GO:transposition, DNA-mediated ; GO:0006313
Pfam:PF01528 Herpes_glycop > GO:membrane ; GO:0016020
Pfam:PF01529 zf-DHHC > GO:zinc ion binding ; GO:0008270
Pfam:PF01530 zf-C2HC > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF01530 zf-C2HC > GO:zinc ion binding ; GO:0008270
Pfam:PF01530 zf-C2HC > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01530 zf-C2HC > GO:nucleus ; GO:0005634
Pfam:PF01531 Glyco_transf_11 > GO:galactoside 2-alpha-L-fucosyltransferase activity ; GO:0008107
Pfam:PF01531 Glyco_transf_11 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF01531 Glyco_transf_11 > GO:membrane ; GO:0016020
Pfam:PF01532 Glyco_hydro_47 > GO:mannosyl-oligosaccharide 1,2-alpha-mannosidase activity ; GO:0004571
Pfam:PF01532 Glyco_hydro_47 > GO:calcium ion binding ; GO:0005509
Pfam:PF01532 Glyco_hydro_47 > GO:membrane ; GO:0016020
Pfam:PF01533 Tospo_nucleocap > GO:viral nucleocapsid ; GO:0019013
Pfam:PF01534 Frizzled > GO:cell surface receptor signaling pathway ; GO:0007166
Pfam:PF01534 Frizzled > GO:membrane ; GO:0016020
Pfam:PF01536 SAM_decarbox > GO:adenosylmethionine decarboxylase activity ; GO:0004014
Pfam:PF01536 SAM_decarbox > GO:spermine biosynthetic process ; GO:0006597
Pfam:PF01536 SAM_decarbox > GO:spermidine biosynthetic process ; GO:0008295
Pfam:PF01537 Herpes_glycop_D > GO:integral component of membrane ; GO:0016021
Pfam:PF01538 HCV_NS2 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF01538 HCV_NS2 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF01538 HCV_NS2 > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF01538 HCV_NS2 > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF01538 HCV_NS2 > GO:nucleoside-triphosphatase activity ; GO:0017111
Pfam:PF01538 HCV_NS2 > GO:serine-type exopeptidase activity ; GO:0070008
Pfam:PF01539 HCV_env > GO:viral envelope ; GO:0019031
Pfam:PF01542 HCV_core > GO:structural molecule activity ; GO:0005198
Pfam:PF01543 HCV_capsid > GO:structural molecule activity ; GO:0005198
Pfam:PF01543 HCV_capsid > GO:viral capsid ; GO:0019028
Pfam:PF01544 CorA > GO:metal ion transmembrane transporter activity ; GO:0046873
Pfam:PF01544 CorA > GO:metal ion transport ; GO:0030001
Pfam:PF01544 CorA > GO:transmembrane transport ; GO:0055085
Pfam:PF01544 CorA > GO:membrane ; GO:0016020
Pfam:PF01545 Cation_efflux > GO:cation transmembrane transporter activity ; GO:0008324
Pfam:PF01545 Cation_efflux > GO:cation transport ; GO:0006812
Pfam:PF01545 Cation_efflux > GO:transmembrane transport ; GO:0055085
Pfam:PF01545 Cation_efflux > GO:integral component of membrane ; GO:0016021
Pfam:PF01546 Peptidase_M20 > GO:hydrolase activity ; GO:0016787
Pfam:PF01546 Peptidase_M20 > GO:metabolic process ; GO:0008152
Pfam:PF01547 SBP_bac_1 > GO:transporter activity ; GO:0005215
Pfam:PF01547 SBP_bac_1 > GO:transport ; GO:0006810
Pfam:PF01548 DEDD_Tnp_IS110 > GO:DNA binding ; GO:0003677
Pfam:PF01548 DEDD_Tnp_IS110 > GO:transposase activity ; GO:0004803
Pfam:PF01548 DEDD_Tnp_IS110 > GO:transposition, DNA-mediated ; GO:0006313
Pfam:PF01552 Pico_P2B > GO:nucleotide binding ; GO:0000166
Pfam:PF01552 Pico_P2B > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF01552 Pico_P2B > GO:structural molecule activity ; GO:0005198
Pfam:PF01552 Pico_P2B > GO:peptidase activity ; GO:0008233
Pfam:PF01552 Pico_P2B > GO:cysteine-type peptidase activity ; GO:0008234
Pfam:PF01552 Pico_P2B > GO:transferase activity ; GO:0016740
Pfam:PF01552 Pico_P2B > GO:nucleotidyltransferase activity ; GO:0016779
Pfam:PF01552 Pico_P2B > GO:hydrolase activity ; GO:0016787
Pfam:PF01552 Pico_P2B > GO:RNA-protein covalent cross-linking ; GO:0018144
Pfam:PF01552 Pico_P2B > GO:virion ; GO:0019012
Pfam:PF01553 Acyltransferase > GO:transferase activity, transferring acyl groups ; GO:0016746
Pfam:PF01553 Acyltransferase > GO:metabolic process ; GO:0008152
Pfam:PF01554 MatE > GO:drug transmembrane transporter activity ; GO:0015238
Pfam:PF01554 MatE > GO:antiporter activity ; GO:0015297
Pfam:PF01554 MatE > GO:drug transmembrane transport ; GO:0006855
Pfam:PF01554 MatE > GO:transmembrane transport ; GO:0055085
Pfam:PF01554 MatE > GO:membrane ; GO:0016020
Pfam:PF01555 N6_N4_Mtase > GO:DNA binding ; GO:0003677
Pfam:PF01555 N6_N4_Mtase > GO:N-methyltransferase activity ; GO:0008170
Pfam:PF01555 N6_N4_Mtase > GO:DNA methylation ; GO:0006306
Pfam:PF01557 FAA_hydrolase > GO:catalytic activity ; GO:0003824
Pfam:PF01557 FAA_hydrolase > GO:metabolic process ; GO:0008152
Pfam:PF01558 POR > GO:oxidoreductase activity, acting on the aldehyde or oxo group of donors ; GO:0016903
Pfam:PF01558 POR > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01559 Zein > GO:nutrient reservoir activity ; GO:0045735
Pfam:PF01561 Hanta_G2 > GO:evasion or tolerance by virus of host immune response ; GO:0030683
Pfam:PF01561 Hanta_G2 > GO:virion ; GO:0019012
Pfam:PF01562 Pep_M12B_propep > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF01562 Pep_M12B_propep > GO:zinc ion binding ; GO:0008270
Pfam:PF01562 Pep_M12B_propep > GO:proteolysis ; GO:0006508
Pfam:PF01563 Alpha_E3_glycop > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF01563 Alpha_E3_glycop > GO:viral capsid ; GO:0019028
Pfam:PF01563 Alpha_E3_glycop > GO:virion membrane ; GO:0055036
Pfam:PF01564 Spermine_synth > GO:catalytic activity ; GO:0003824
Pfam:PF01565 FAD_binding_4 > GO:UDP-N-acetylmuramate dehydrogenase activity ; GO:0008762
Pfam:PF01565 FAD_binding_4 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF01565 FAD_binding_4 > GO:flavin adenine dinucleotide binding ; GO:0050660
Pfam:PF01565 FAD_binding_4 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01566 Nramp > GO:transporter activity ; GO:0005215
Pfam:PF01566 Nramp > GO:transport ; GO:0006810
Pfam:PF01566 Nramp > GO:membrane ; GO:0016020
Pfam:PF01567 Hanta_G1 > GO:evasion or tolerance by virus of host immune response ; GO:0030683
Pfam:PF01567 Hanta_G1 > GO:virion ; GO:0019012
Pfam:PF01568 Molydop_binding > GO:oxidoreductase activity ; GO:0016491
Pfam:PF01568 Molydop_binding > GO:molybdenum ion binding ; GO:0030151
Pfam:PF01568 Molydop_binding > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01569 PAP2 > GO:catalytic activity ; GO:0003824
Pfam:PF01569 PAP2 > GO:membrane ; GO:0016020
Pfam:PF01571 GCV_T > GO:aminomethyltransferase activity ; GO:0004047
Pfam:PF01571 GCV_T > GO:glycine catabolic process ; GO:0006546
Pfam:PF01571 GCV_T > GO:cytoplasm ; GO:0005737
Pfam:PF01573 Bromo_MP > GO:transport of virus in host, cell to cell ; GO:0046740
Pfam:PF01573 Bromo_MP > GO:host cell junction ; GO:0044156
Pfam:PF01576 Myosin_tail_1 > GO:motor activity ; GO:0003774
Pfam:PF01576 Myosin_tail_1 > GO:myosin complex ; GO:0016459
Pfam:PF01577 Peptidase_S30 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF01577 Peptidase_S30 > GO:proteolysis ; GO:0006508
Pfam:PF01578 Cytochrom_C_asm > GO:heme binding ; GO:0020037
Pfam:PF01578 Cytochrom_C_asm > GO:cytochrome complex assembly ; GO:0017004
Pfam:PF01580 FtsK_SpoIIIE > GO:nucleotide binding ; GO:0000166
Pfam:PF01580 FtsK_SpoIIIE > GO:DNA binding ; GO:0003677
Pfam:PF01580 FtsK_SpoIIIE > GO:ATP binding ; GO:0005524
Pfam:PF01580 FtsK_SpoIIIE > GO:cell cycle ; GO:0007049
Pfam:PF01580 FtsK_SpoIIIE > GO:chromosome segregation ; GO:0007059
Pfam:PF01580 FtsK_SpoIIIE > GO:cell division ; GO:0051301
Pfam:PF01580 FtsK_SpoIIIE > GO:integral component of membrane ; GO:0016021
Pfam:PF01581 FARP > GO:neuropeptide signaling pathway ; GO:0007218
Pfam:PF01582 TIR > GO:protein binding ; GO:0005515
Pfam:PF01582 TIR > GO:signal transduction ; GO:0007165
Pfam:PF01583 APS_kinase > GO:adenylylsulfate kinase activity ; GO:0004020
Pfam:PF01583 APS_kinase > GO:ATP binding ; GO:0005524
Pfam:PF01583 APS_kinase > GO:sulfate assimilation ; GO:0000103
Pfam:PF01584 CheW > GO:signal transducer activity ; GO:0004871
Pfam:PF01584 CheW > GO:chemotaxis ; GO:0006935
Pfam:PF01584 CheW > GO:signal transduction ; GO:0007165
Pfam:PF01584 CheW > GO:intracellular ; GO:0005622
Pfam:PF01585 G-patch > GO:nucleic acid binding ; GO:0003676
Pfam:PF01586 Basic > GO:DNA binding ; GO:0003677
Pfam:PF01586 Basic > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01586 Basic > GO:muscle organ development ; GO:0007517
Pfam:PF01586 Basic > GO:nucleus ; GO:0005634
Pfam:PF01588 tRNA_bind > GO:tRNA binding ; GO:0000049
Pfam:PF01589 Alpha_E1_glycop > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF01589 Alpha_E1_glycop > GO:viral capsid ; GO:0019028
Pfam:PF01589 Alpha_E1_glycop > GO:virion membrane ; GO:0055036
Pfam:PF01590 GAF > GO:protein binding ; GO:0005515
Pfam:PF01591 6PF2K > GO:6-phosphofructo-2-kinase activity ; GO:0003873
Pfam:PF01591 6PF2K > GO:ATP binding ; GO:0005524
Pfam:PF01591 6PF2K > GO:fructose metabolic process ; GO:0006000
Pfam:PF01592 NifU_N > GO:iron ion binding ; GO:0005506
Pfam:PF01592 NifU_N > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF01592 NifU_N > GO:iron-sulfur cluster assembly ; GO:0016226
Pfam:PF01593 Amino_oxidase > GO:oxidoreductase activity ; GO:0016491
Pfam:PF01593 Amino_oxidase > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01596 Methyltransf_3 > GO:O-methyltransferase activity ; GO:0008171
Pfam:PF01599 Ribosomal_S27 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01599 Ribosomal_S27 > GO:translation ; GO:0006412
Pfam:PF01599 Ribosomal_S27 > GO:intracellular ; GO:0005622
Pfam:PF01599 Ribosomal_S27 > GO:ribosome ; GO:0005840
Pfam:PF01600 Corona_S1 > GO:fusion of virus membrane with host plasma membrane ; GO:0019064
Pfam:PF01600 Corona_S1 > GO:membrane ; GO:0016020
Pfam:PF01601 Corona_S2 > GO:receptor-mediated virion attachment to host cell ; GO:0046813
Pfam:PF01601 Corona_S2 > GO:membrane fusion ; GO:0061025
Pfam:PF01601 Corona_S2 > GO:integral component of membrane ; GO:0016021
Pfam:PF01601 Corona_S2 > GO:viral envelope ; GO:0019031
Pfam:PF01602 Adaptin_N > GO:intracellular protein transport ; GO:0006886
Pfam:PF01602 Adaptin_N > GO:vesicle-mediated transport ; GO:0016192
Pfam:PF01602 Adaptin_N > GO:membrane coat ; GO:0030117
Pfam:PF01603 B56 > GO:protein phosphatase type 2A regulator activity ; GO:0008601
Pfam:PF01603 B56 > GO:signal transduction ; GO:0007165
Pfam:PF01603 B56 > GO:protein phosphatase type 2A complex ; GO:0000159
Pfam:PF01607 CBM_14 > GO:chitin binding ; GO:0008061
Pfam:PF01607 CBM_14 > GO:chitin metabolic process ; GO:0006030
Pfam:PF01607 CBM_14 > GO:extracellular region ; GO:0005576
Pfam:PF01608 I_LWEQ > GO:actin binding ; GO:0003779
Pfam:PF01609 DDE_Tnp_1 > GO:DNA binding ; GO:0003677
Pfam:PF01609 DDE_Tnp_1 > GO:transposase activity ; GO:0004803
Pfam:PF01609 DDE_Tnp_1 > GO:transposition, DNA-mediated ; GO:0006313
Pfam:PF01610 DDE_Tnp_ISL3 > GO:DNA binding ; GO:0003677
Pfam:PF01610 DDE_Tnp_ISL3 > GO:transposase activity ; GO:0004803
Pfam:PF01610 DDE_Tnp_ISL3 > GO:transposition, DNA-mediated ; GO:0006313
Pfam:PF01612 DNA_pol_A_exo1 > GO:nucleic acid binding ; GO:0003676
Pfam:PF01612 DNA_pol_A_exo1 > GO:3'-5' exonuclease activity ; GO:0008408
Pfam:PF01612 DNA_pol_A_exo1 > GO:nucleobase-containing compound metabolic process ; GO:0006139
Pfam:PF01613 Flavin_Reduct > GO:FMN binding ; GO:0010181
Pfam:PF01613 Flavin_Reduct > GO:oxidoreductase activity ; GO:0016491
Pfam:PF01613 Flavin_Reduct > GO:riboflavin reductase (NADPH) activity ; GO:0042602
Pfam:PF01613 Flavin_Reduct > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01618 MotA_ExbB > GO:protein transporter activity ; GO:0008565
Pfam:PF01618 MotA_ExbB > GO:transport ; GO:0006810
Pfam:PF01618 MotA_ExbB > GO:membrane ; GO:0016020
Pfam:PF01620 Pollen_allerg_2 > GO:type I hypersensitivity ; GO:0016068
Pfam:PF01621 Fusion_gly_K > GO:cell adhesion ; GO:0007155
Pfam:PF01621 Fusion_gly_K > GO:membrane ; GO:0016020
Pfam:PF01623 Carla_C4 > GO:nucleic acid binding ; GO:0003676
Pfam:PF01623 Carla_C4 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01624 MutS_I > GO:ATP binding ; GO:0005524
Pfam:PF01624 MutS_I > GO:mismatched DNA binding ; GO:0030983
Pfam:PF01624 MutS_I > GO:mismatch repair ; GO:0006298
Pfam:PF01625 PMSR > GO:peptide-methionine (S)-S-oxide reductase activity ; GO:0008113
Pfam:PF01625 PMSR > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01627 Hpt > GO:signal transducer activity ; GO:0004871
Pfam:PF01627 Hpt > GO:phosphorelay signal transduction system ; GO:0000160
Pfam:PF01628 HrcA > GO:DNA binding ; GO:0003677
Pfam:PF01628 HrcA > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01630 Glyco_hydro_56 > GO:hyalurononglucosaminidase activity ; GO:0004415
Pfam:PF01630 Glyco_hydro_56 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF01632 Ribosomal_L35p > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01632 Ribosomal_L35p > GO:translation ; GO:0006412
Pfam:PF01632 Ribosomal_L35p > GO:intracellular ; GO:0005622
Pfam:PF01632 Ribosomal_L35p > GO:ribosome ; GO:0005840
Pfam:PF01634 HisG > GO:ATP phosphoribosyltransferase activity ; GO:0003879
Pfam:PF01634 HisG > GO:histidine biosynthetic process ; GO:0000105
Pfam:PF01634 HisG > GO:cytoplasm ; GO:0005737
Pfam:PF01635 Corona_M > GO:viral life cycle ; GO:0019058
Pfam:PF01637 Arch_ATPase > GO:ATP binding ; GO:0005524
Pfam:PF01640 Peptidase_C10 > GO:cysteine-type peptidase activity ; GO:0008234
Pfam:PF01640 Peptidase_C10 > GO:proteolysis ; GO:0006508
Pfam:PF01641 SelR > GO:peptide-methionine (R)-S-oxide reductase activity ; GO:0033743
Pfam:PF01641 SelR > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01642 MM_CoA_mutase > GO:intramolecular transferase activity ; GO:0016866
Pfam:PF01642 MM_CoA_mutase > GO:cobalamin binding ; GO:0031419
Pfam:PF01642 MM_CoA_mutase > GO:metabolic process ; GO:0008152
Pfam:PF01643 Acyl-ACP_TE > GO:thiolester hydrolase activity ; GO:0016790
Pfam:PF01643 Acyl-ACP_TE > GO:fatty acid biosynthetic process ; GO:0006633
Pfam:PF01644 Chitin_synth_1 > GO:chitin synthase activity ; GO:0004100
Pfam:PF01644 Chitin_synth_1 > GO:chitin biosynthetic process ; GO:0006031
Pfam:PF01645 Glu_synthase > GO:glutamate synthase activity ; GO:0015930
Pfam:PF01645 Glu_synthase > GO:oxidoreductase activity, acting on the CH-NH2 group of donors ; GO:0016638
Pfam:PF01645 Glu_synthase > GO:glutamate biosynthetic process ; GO:0006537
Pfam:PF01645 Glu_synthase > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01648 ACPS > GO:magnesium ion binding ; GO:0000287
Pfam:PF01648 ACPS > GO:holo-[acyl-carrier-protein] synthase activity ; GO:0008897
Pfam:PF01648 ACPS > GO:macromolecule biosynthetic process ; GO:0009059
Pfam:PF01649 Ribosomal_S20p > GO:RNA binding ; GO:0003723
Pfam:PF01649 Ribosomal_S20p > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01649 Ribosomal_S20p > GO:translation ; GO:0006412
Pfam:PF01649 Ribosomal_S20p > GO:intracellular ; GO:0005622
Pfam:PF01649 Ribosomal_S20p > GO:ribosome ; GO:0005840
Pfam:PF01650 Peptidase_C13 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF01650 Peptidase_C13 > GO:proteolysis ; GO:0006508
Pfam:PF01652 IF4E > GO:RNA binding ; GO:0003723
Pfam:PF01652 IF4E > GO:translation initiation factor activity ; GO:0003743
Pfam:PF01652 IF4E > GO:translational initiation ; GO:0006413
Pfam:PF01652 IF4E > GO:cytoplasm ; GO:0005737
Pfam:PF01653 DNA_ligase_aden > GO:DNA ligase (NAD+) activity ; GO:0003911
Pfam:PF01654 Bac_Ubq_Cox > GO:membrane ; GO:0016020
Pfam:PF01655 Ribosomal_L32e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01655 Ribosomal_L32e > GO:translation ; GO:0006412
Pfam:PF01655 Ribosomal_L32e > GO:intracellular ; GO:0005622
Pfam:PF01655 Ribosomal_L32e > GO:ribosome ; GO:0005840
Pfam:PF01660 Vmethyltransf > GO:RNA binding ; GO:0003723
Pfam:PF01660 Vmethyltransf > GO:mRNA methyltransferase activity ; GO:0008174
Pfam:PF01660 Vmethyltransf > GO:RNA processing ; GO:0006396
Pfam:PF01660 Vmethyltransf > GO:mRNA methylation ; GO:0080009
Pfam:PF01663 Phosphodiest > GO:catalytic activity ; GO:0003824
Pfam:PF01664 Reo_sigma1 > GO:cell adhesion ; GO:0007155
Pfam:PF01664 Reo_sigma1 > GO:viral life cycle ; GO:0019058
Pfam:PF01664 Reo_sigma1 > GO:virion attachment to host cell ; GO:0019062
Pfam:PF01665 Rota_NSP3 > GO:RNA binding ; GO:0003723
Pfam:PF01667 Ribosomal_S27e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01667 Ribosomal_S27e > GO:translation ; GO:0006412
Pfam:PF01667 Ribosomal_S27e > GO:intracellular ; GO:0005622
Pfam:PF01667 Ribosomal_S27e > GO:ribosome ; GO:0005840
Pfam:PF01668 SmpB > GO:RNA binding ; GO:0003723
Pfam:PF01669 Myelin_MBP > GO:structural constituent of myelin sheath ; GO:0019911
Pfam:PF01670 Glyco_hydro_12 > GO:cellulase activity ; GO:0008810
Pfam:PF01670 Glyco_hydro_12 > GO:polysaccharide catabolic process ; GO:0000272
Pfam:PF01671 ASFV_360 > GO:taxis ; GO:0042330
Pfam:PF01673 Herpes_env > GO:viral envelope ; GO:0019031
Pfam:PF01674 Lipase_2 > GO:hydrolase activity ; GO:0016787
Pfam:PF01676 Metalloenzyme > GO:catalytic activity ; GO:0003824
Pfam:PF01676 Metalloenzyme > GO:metal ion binding ; GO:0046872
Pfam:PF01678 DAP_epimerase > GO:diaminopimelate epimerase activity ; GO:0008837
Pfam:PF01678 DAP_epimerase > GO:lysine biosynthetic process via diaminopimelate ; GO:0009089
Pfam:PF01679 Pmp3 > GO:integral component of membrane ; GO:0016021
Pfam:PF01680 SOR_SNZ > GO:pyridoxal phosphate biosynthetic process ; GO:0042823
Pfam:PF01686 Adeno_Penton_B > GO:structural molecule activity ; GO:0005198
Pfam:PF01687 Flavokinase > GO:riboflavin kinase activity ; GO:0008531
Pfam:PF01687 Flavokinase > GO:riboflavin biosynthetic process ; GO:0009231
Pfam:PF01688 Herpes_gI > GO:host cell ; GO:0043657
Pfam:PF01690 PLRV_ORF5 > GO:viral capsid ; GO:0019028
Pfam:PF01691 Adeno_E1B_19K > GO:lamin binding ; GO:0005521
Pfam:PF01691 Adeno_E1B_19K > GO:negative regulation of apoptotic process ; GO:0043066
Pfam:PF01692 Paramyxo_C > GO:evasion or tolerance by virus of host immune response ; GO:0030683
Pfam:PF01694 Rhomboid > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF01694 Rhomboid > GO:integral component of membrane ; GO:0016021
Pfam:PF01695 IstB_IS21 > GO:ATP binding ; GO:0005524
Pfam:PF01698 FLO_LFY > GO:DNA binding ; GO:0003677
Pfam:PF01698 FLO_LFY > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01699 Na_Ca_ex > GO:transmembrane transport ; GO:0055085
Pfam:PF01699 Na_Ca_ex > GO:integral component of membrane ; GO:0016021
Pfam:PF01700 Orbi_VP3 > GO:structural molecule activity ; GO:0005198
Pfam:PF01701 PSI_PsaJ > GO:photosynthesis ; GO:0015979
Pfam:PF01701 PSI_PsaJ > GO:photosystem I ; GO:0009522
Pfam:PF01702 TGT > GO:queuine tRNA-ribosyltransferase activity ; GO:0008479
Pfam:PF01702 TGT > GO:tRNA modification ; GO:0006400
Pfam:PF01702 TGT > GO:queuosine biosynthetic process ; GO:0008616
Pfam:PF01704 UDPGP > GO:uridylyltransferase activity ; GO:0070569
Pfam:PF01704 UDPGP > GO:metabolic process ; GO:0008152
Pfam:PF01708 Gemini_mov > GO:transport of virus in host, cell to cell ; GO:0046740
Pfam:PF01708 Gemini_mov > GO:integral component of membrane ; GO:0016021
Pfam:PF01712 dNK > GO:ATP binding ; GO:0005524
Pfam:PF01712 dNK > GO:nucleoside kinase activity ; GO:0019206
Pfam:PF01712 dNK > GO:nucleobase-containing compound metabolic process ; GO:0006139
Pfam:PF01715 IPPT > GO:ATP binding ; GO:0005524
Pfam:PF01715 IPPT > GO:tRNA processing ; GO:0008033
Pfam:PF01716 MSP > GO:calcium ion binding ; GO:0005509
Pfam:PF01716 MSP > GO:photosynthesis ; GO:0015979
Pfam:PF01716 MSP > GO:photosystem II stabilization ; GO:0042549
Pfam:PF01716 MSP > GO:photosystem II ; GO:0009523
Pfam:PF01716 MSP > GO:photosystem II oxygen evolving complex ; GO:0009654
Pfam:PF01716 MSP > GO:extrinsic component of membrane ; GO:0019898
Pfam:PF01717 Meth_synt_2 > GO:5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity ; GO:0003871
Pfam:PF01717 Meth_synt_2 > GO:zinc ion binding ; GO:0008270
Pfam:PF01717 Meth_synt_2 > GO:methionine biosynthetic process ; GO:0009086
Pfam:PF01719 Rep_2 > GO:DNA binding ; GO:0003677
Pfam:PF01719 Rep_2 > GO:DNA topoisomerase activity ; GO:0003916
Pfam:PF01719 Rep_2 > GO:DNA replication ; GO:0006260
Pfam:PF01719 Rep_2 > GO:extrachromosomal circular DNA ; GO:0005727
Pfam:PF01721 Bacteriocin_II > GO:defense response to bacterium ; GO:0042742
Pfam:PF01721 Bacteriocin_II > GO:extracellular region ; GO:0005576
Pfam:PF01723 Chorion_1 > GO:structural constituent of chorion ; GO:0005213
Pfam:PF01723 Chorion_1 > GO:multicellular organismal development ; GO:0007275
Pfam:PF01723 Chorion_1 > GO:chorion-containing eggshell formation ; GO:0007304
Pfam:PF01723 Chorion_1 > GO:chorion ; GO:0042600
Pfam:PF01725 Ham1p_like > GO:hydrolase activity ; GO:0016787
Pfam:PF01726 LexA_DNA_bind > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF01726 LexA_DNA_bind > GO:proteolysis ; GO:0006508
Pfam:PF01728 FtsJ > GO:methyltransferase activity ; GO:0008168
Pfam:PF01728 FtsJ > GO:methylation ; GO:0032259
Pfam:PF01729 QRPTase_C > GO:nicotinate-nucleotide diphosphorylase (carboxylating) activity ; GO:0004514
Pfam:PF01729 QRPTase_C > GO:NAD biosynthetic process ; GO:0009435
Pfam:PF01730 UreF > GO:nickel cation binding ; GO:0016151
Pfam:PF01730 UreF > GO:nitrogen compound metabolic process ; GO:0006807
Pfam:PF01731 Arylesterase > GO:arylesterase activity ; GO:0004064
Pfam:PF01733 Nucleoside_tran > GO:nucleoside transmembrane transporter activity ; GO:0005337
Pfam:PF01733 Nucleoside_tran > GO:transport ; GO:0006810
Pfam:PF01733 Nucleoside_tran > GO:integral component of membrane ; GO:0016021
Pfam:PF01734 Patatin > GO:lipid metabolic process ; GO:0006629
Pfam:PF01735 PLA2_B > GO:phospholipase activity ; GO:0004620
Pfam:PF01735 PLA2_B > GO:phospholipid catabolic process ; GO:0009395
Pfam:PF01736 Polyoma_agno > GO:DNA binding ; GO:0003677
Pfam:PF01737 Ycf9 > GO:photosynthesis ; GO:0015979
Pfam:PF01737 Ycf9 > GO:photosystem II stabilization ; GO:0042549
Pfam:PF01737 Ycf9 > GO:photosystem II ; GO:0009523
Pfam:PF01737 Ycf9 > GO:photosystem II reaction center ; GO:0009539
Pfam:PF01738 DLH > GO:hydrolase activity ; GO:0016787
Pfam:PF01741 MscL > GO:ion channel activity ; GO:0005216
Pfam:PF01741 MscL > GO:transport ; GO:0006810
Pfam:PF01741 MscL > GO:integral component of membrane ; GO:0016021
Pfam:PF01742 Peptidase_M27 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF01742 Peptidase_M27 > GO:proteolysis ; GO:0006508
Pfam:PF01742 Peptidase_M27 > GO:pathogenesis ; GO:0009405
Pfam:PF01743 PolyA_pol > GO:RNA binding ; GO:0003723
Pfam:PF01743 PolyA_pol > GO:nucleotidyltransferase activity ; GO:0016779
Pfam:PF01743 PolyA_pol > GO:RNA processing ; GO:0006396
Pfam:PF01745 IPT > GO:dimethylallyltranstransferase activity ; GO:0004161
Pfam:PF01745 IPT > GO:biosynthetic process ; GO:0009058
Pfam:PF01747 ATP-sulfurylase > GO:sulfate adenylyltransferase (ATP) activity ; GO:0004781
Pfam:PF01749 IBB > GO:protein transporter activity ; GO:0008565
Pfam:PF01749 IBB > GO:protein import into nucleus ; GO:0006606
Pfam:PF01749 IBB > GO:nucleus ; GO:0005634
Pfam:PF01749 IBB > GO:cytoplasm ; GO:0005737
Pfam:PF01750 HycI > GO:enzyme activator activity ; GO:0008047
Pfam:PF01750 HycI > GO:peptidase activity ; GO:0008233
Pfam:PF01752 Peptidase_M9 > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF01752 Peptidase_M9 > GO:zinc ion binding ; GO:0008270
Pfam:PF01752 Peptidase_M9 > GO:proteolysis ; GO:0006508
Pfam:PF01752 Peptidase_M9 > GO:extracellular region ; GO:0005576
Pfam:PF01754 zf-A20 > GO:DNA binding ; GO:0003677
Pfam:PF01754 zf-A20 > GO:zinc ion binding ; GO:0008270
Pfam:PF01755 Glyco_transf_25 > GO:lipopolysaccharide biosynthetic process ; GO:0009103
Pfam:PF01756 ACOX > GO:acyl-CoA oxidase activity ; GO:0003997
Pfam:PF01756 ACOX > GO:fatty acid beta-oxidation ; GO:0006635
Pfam:PF01756 ACOX > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01756 ACOX > GO:peroxisome ; GO:0005777
Pfam:PF01757 Acyl_transf_3 > GO:transferase activity, transferring acyl groups other than amino-acyl groups ; GO:0016747
Pfam:PF01758 SBF > GO:bile acid:sodium symporter activity ; GO:0008508
Pfam:PF01758 SBF > GO:sodium ion transport ; GO:0006814
Pfam:PF01758 SBF > GO:membrane ; GO:0016020
Pfam:PF01761 DHQ_synthase > GO:3-dehydroquinate synthase activity ; GO:0003856
Pfam:PF01761 DHQ_synthase > GO:aromatic amino acid family biosynthetic process ; GO:0009073
Pfam:PF01762 Galactosyl_T > GO:galactosyltransferase activity ; GO:0008378
Pfam:PF01762 Galactosyl_T > GO:protein glycosylation ; GO:0006486
Pfam:PF01762 Galactosyl_T > GO:membrane ; GO:0016020
Pfam:PF01763 Herpes_UL6 > GO:DNA packaging ; GO:0006323
Pfam:PF01764 Lipase_3 > GO:lipid metabolic process ; GO:0006629
Pfam:PF01766 Birna_VP2 > GO:structural molecule activity ; GO:0005198
Pfam:PF01767 Birna_VP3 > GO:structural molecule activity ; GO:0005198
Pfam:PF01769 MgtE > GO:cation transmembrane transporter activity ; GO:0008324
Pfam:PF01769 MgtE > GO:cation transport ; GO:0006812
Pfam:PF01770 Folate_carrier > GO:transport ; GO:0006810
Pfam:PF01770 Folate_carrier > GO:membrane ; GO:0016020
Pfam:PF01771 Herpes_alk_exo > GO:DNA binding ; GO:0003677
Pfam:PF01771 Herpes_alk_exo > GO:exonuclease activity ; GO:0004527
Pfam:PF01774 UreD > GO:nickel cation binding ; GO:0016151
Pfam:PF01774 UreD > GO:nitrogen compound metabolic process ; GO:0006807
Pfam:PF01775 Ribosomal_L18ae > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01775 Ribosomal_L18ae > GO:translation ; GO:0006412
Pfam:PF01775 Ribosomal_L18ae > GO:ribosome ; GO:0005840
Pfam:PF01776 Ribosomal_L22e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01776 Ribosomal_L22e > GO:translation ; GO:0006412
Pfam:PF01776 Ribosomal_L22e > GO:intracellular ; GO:0005622
Pfam:PF01776 Ribosomal_L22e > GO:ribosome ; GO:0005840
Pfam:PF01777 Ribosomal_L27e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01777 Ribosomal_L27e > GO:translation ; GO:0006412
Pfam:PF01777 Ribosomal_L27e > GO:intracellular ; GO:0005622
Pfam:PF01777 Ribosomal_L27e > GO:ribosome ; GO:0005840
Pfam:PF01779 Ribosomal_L29e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01779 Ribosomal_L29e > GO:translation ; GO:0006412
Pfam:PF01779 Ribosomal_L29e > GO:intracellular ; GO:0005622
Pfam:PF01779 Ribosomal_L29e > GO:ribosome ; GO:0005840
Pfam:PF01780 Ribosomal_L37ae > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01780 Ribosomal_L37ae > GO:translation ; GO:0006412
Pfam:PF01780 Ribosomal_L37ae > GO:intracellular ; GO:0005622
Pfam:PF01780 Ribosomal_L37ae > GO:ribosome ; GO:0005840
Pfam:PF01781 Ribosomal_L38e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01781 Ribosomal_L38e > GO:translation ; GO:0006412
Pfam:PF01781 Ribosomal_L38e > GO:intracellular ; GO:0005622
Pfam:PF01781 Ribosomal_L38e > GO:ribosome ; GO:0005840
Pfam:PF01782 RimM > GO:rRNA processing ; GO:0006364
Pfam:PF01783 Ribosomal_L32p > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01783 Ribosomal_L32p > GO:translation ; GO:0006412
Pfam:PF01783 Ribosomal_L32p > GO:large ribosomal subunit ; GO:0015934
Pfam:PF01785 Closter_coat > GO:virion ; GO:0019012
Pfam:PF01786 AOX > GO:alternative oxidase activity ; GO:0009916
Pfam:PF01786 AOX > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01787 Ilar_coat > GO:RNA binding ; GO:0003723
Pfam:PF01787 Ilar_coat > GO:translational initiation ; GO:0006413
Pfam:PF01787 Ilar_coat > GO:virion ; GO:0019012
Pfam:PF01788 PsbJ > GO:photosynthesis ; GO:0015979
Pfam:PF01788 PsbJ > GO:photosystem II ; GO:0009523
Pfam:PF01788 PsbJ > GO:photosystem II reaction center ; GO:0009539
Pfam:PF01788 PsbJ > GO:membrane ; GO:0016020
Pfam:PF01789 PsbP > GO:calcium ion binding ; GO:0005509
Pfam:PF01789 PsbP > GO:photosynthesis ; GO:0015979
Pfam:PF01789 PsbP > GO:photosystem II ; GO:0009523
Pfam:PF01789 PsbP > GO:photosystem II oxygen evolving complex ; GO:0009654
Pfam:PF01789 PsbP > GO:extrinsic component of membrane ; GO:0019898
Pfam:PF01790 LGT > GO:transferase activity, transferring glycosyl groups ; GO:0016757
Pfam:PF01790 LGT > GO:protein lipoylation ; GO:0009249
Pfam:PF01790 LGT > GO:lipoprotein biosynthetic process ; GO:0042158
Pfam:PF01790 LGT > GO:membrane ; GO:0016020
Pfam:PF01791 DeoC > GO:lyase activity ; GO:0016829
Pfam:PF01793 Glyco_transf_15 > GO:mannosyltransferase activity ; GO:0000030
Pfam:PF01793 Glyco_transf_15 > GO:protein glycosylation ; GO:0006486
Pfam:PF01793 Glyco_transf_15 > GO:membrane ; GO:0016020
Pfam:PF01795 Methyltransf_5 > GO:methyltransferase activity ; GO:0008168
Pfam:PF01797 Y1_Tnp > GO:DNA binding ; GO:0003677
Pfam:PF01797 Y1_Tnp > GO:transposase activity ; GO:0004803
Pfam:PF01797 Y1_Tnp > GO:transposition, DNA-mediated ; GO:0006313
Pfam:PF01799 Fer2_2 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF01799 Fer2_2 > GO:metal ion binding ; GO:0046872
Pfam:PF01799 Fer2_2 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01801 Cytomega_gL > GO:viral process ; GO:0016032
Pfam:PF01801 Cytomega_gL > GO:viral envelope ; GO:0019031
Pfam:PF01802 Herpes_V23 > GO:structural molecule activity ; GO:0005198
Pfam:PF01802 Herpes_V23 > GO:viral capsid ; GO:0019028
Pfam:PF01804 Penicil_amidase > GO:hydrolase activity ; GO:0016787
Pfam:PF01804 Penicil_amidase > GO:antibiotic biosynthetic process ; GO:0017000
Pfam:PF01805 Surp > GO:RNA binding ; GO:0003723
Pfam:PF01805 Surp > GO:RNA processing ; GO:0006396
Pfam:PF01806 Paramyxo_P > GO:RNA binding ; GO:0003723
Pfam:PF01806 Paramyxo_P > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF01806 Paramyxo_P > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF01806 Paramyxo_P > GO:viral genome replication ; GO:0019079
Pfam:PF01807 zf-CHC2 > GO:DNA binding ; GO:0003677
Pfam:PF01807 zf-CHC2 > GO:DNA primase activity ; GO:0003896
Pfam:PF01807 zf-CHC2 > GO:zinc ion binding ; GO:0008270
Pfam:PF01807 zf-CHC2 > GO:DNA replication ; GO:0006260
Pfam:PF01808 AICARFT_IMPCHas > GO:IMP cyclohydrolase activity ; GO:0003937
Pfam:PF01808 AICARFT_IMPCHas > GO:phosphoribosylaminoimidazolecarboxamide formyltransferase activity ; GO:0004643
Pfam:PF01808 AICARFT_IMPCHas > GO:purine nucleotide biosynthetic process ; GO:0006164
Pfam:PF01810 LysE > GO:amino acid transport ; GO:0006865
Pfam:PF01810 LysE > GO:membrane ; GO:0016020
Pfam:PF01813 ATP-synt_D > GO:ATPase activity, coupled to transmembrane movement of substances ; GO:0042626
Pfam:PF01817 CM_2 > GO:chorismate metabolic process ; GO:0046417
Pfam:PF01818 Translat_reg > GO:RNA binding ; GO:0003723
Pfam:PF01819 Levi_coat > GO:structural molecule activity ; GO:0005198
Pfam:PF01819 Levi_coat > GO:viral capsid ; GO:0019028
Pfam:PF01821 ANATO > GO:extracellular region ; GO:0005576
Pfam:PF01825 GPS > GO:neuropeptide signaling pathway ; GO:0007218
Pfam:PF01825 GPS > GO:membrane ; GO:0016020
Pfam:PF01828 Peptidase_A4 > GO:aspartic-type endopeptidase activity ; GO:0004190
Pfam:PF01828 Peptidase_A4 > GO:proteolysis ; GO:0006508
Pfam:PF01829 Peptidase_A6 > GO:aspartic-type endopeptidase activity ; GO:0004190
Pfam:PF01829 Peptidase_A6 > GO:proteolysis ; GO:0006508
Pfam:PF01830 Peptidase_C7 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF01830 Peptidase_C7 > GO:proteolysis ; GO:0006508
Pfam:PF01831 Peptidase_C16 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF01831 Peptidase_C16 > GO:cysteine-type peptidase activity ; GO:0008234
Pfam:PF01831 Peptidase_C16 > GO:proteolysis ; GO:0006508
Pfam:PF01832 Glucosaminidase > GO:amidase activity ; GO:0004040
Pfam:PF01833 TIG > GO:protein binding ; GO:0005515
Pfam:PF01834 XRCC1_N > GO:damaged DNA binding ; GO:0003684
Pfam:PF01834 XRCC1_N > GO:single strand break repair ; GO:0000012
Pfam:PF01834 XRCC1_N > GO:nucleus ; GO:0005634
Pfam:PF01835 A2M_N > GO:endopeptidase inhibitor activity ; GO:0004866
Pfam:PF01842 ACT > GO:amino acid binding ; GO:0016597
Pfam:PF01842 ACT > GO:metabolic process ; GO:0008152
Pfam:PF01844 HNH > GO:nucleic acid binding ; GO:0003676
Pfam:PF01844 HNH > GO:endonuclease activity ; GO:0004519
Pfam:PF01845 CcdB > GO:DNA topoisomerase (ATP-hydrolyzing) inhibitor activity ; GO:0008657
Pfam:PF01845 CcdB > GO:plasmid maintenance ; GO:0006276
Pfam:PF01848 HOK_GEF > GO:membrane ; GO:0016020
Pfam:PF01852 START > GO:lipid binding ; GO:0008289
Pfam:PF01853 MOZ_SAS > GO:transferase activity, transferring acyl groups other than amino-acyl groups ; GO:0016747
Pfam:PF01853 MOZ_SAS > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF01853 MOZ_SAS > GO:nucleus ; GO:0005634
Pfam:PF01855 POR_N > GO:oxidoreductase activity ; GO:0016491
Pfam:PF01855 POR_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01857 RB_B > GO:regulation of cell cycle ; GO:0051726
Pfam:PF01857 RB_B > GO:nucleus ; GO:0005634
Pfam:PF01858 RB_A > GO:regulation of cell cycle ; GO:0051726
Pfam:PF01858 RB_A > GO:nucleus ; GO:0005634
Pfam:PF01862 PvlArgDC > GO:arginine decarboxylase activity ; GO:0008792
Pfam:PF01862 PvlArgDC > GO:arginine catabolic process ; GO:0006527
Pfam:PF01866 Diphthamide_syn > GO:peptidyl-diphthamide biosynthetic process from peptidyl-histidine ; GO:0017183
Pfam:PF01866 Diphthamide_syn > GO:cytoplasm ; GO:0005737
Pfam:PF01868 UPF0086 > GO:RNA binding ; GO:0003723
Pfam:PF01868 UPF0086 > GO:ribonuclease activity ; GO:0004540
Pfam:PF01868 UPF0086 > GO:rRNA processing ; GO:0006364
Pfam:PF01868 UPF0086 > GO:mRNA cleavage ; GO:0006379
Pfam:PF01868 UPF0086 > GO:tRNA processing ; GO:0008033
Pfam:PF01868 UPF0086 > GO:ribonuclease MRP complex ; GO:0000172
Pfam:PF01868 UPF0086 > GO:ribonuclease P complex ; GO:0030677
Pfam:PF01872 RibD_C > GO:5-amino-6-(5-phosphoribosylamino)uracil reductase activity ; GO:0008703
Pfam:PF01872 RibD_C > GO:riboflavin biosynthetic process ; GO:0009231
Pfam:PF01872 RibD_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01873 eIF-5_eIF-2B > GO:translation initiation factor activity ; GO:0003743
Pfam:PF01873 eIF-5_eIF-2B > GO:translational initiation ; GO:0006413
Pfam:PF01874 CitG > GO:ATP binding ; GO:0005524
Pfam:PF01874 CitG > GO:triphosphoribosyl-dephospho-CoA synthase activity ; GO:0046917
Pfam:PF01874 CitG > GO:phosphorylation ; GO:0016310
Pfam:PF01876 RNase_P_p30 > GO:ribonuclease activity ; GO:0004540
Pfam:PF01876 RNase_P_p30 > GO:tRNA processing ; GO:0008033
Pfam:PF01880 Desulfoferrodox > GO:iron ion binding ; GO:0005506
Pfam:PF01880 Desulfoferrodox > GO:oxidoreductase activity ; GO:0016491
Pfam:PF01880 Desulfoferrodox > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01884 PcrB > GO:transferase activity, transferring alkyl or aryl (other than methyl) groups ; GO:0016765
Pfam:PF01885 PTS_2-RNA > GO:transferase activity, transferring phosphorus-containing groups ; GO:0016772
Pfam:PF01885 PTS_2-RNA > GO:tRNA splicing, via endonucleolytic cleavage and ligation ; GO:0006388
Pfam:PF01888 CbiD > GO:transferase activity ; GO:0016740
Pfam:PF01888 CbiD > GO:cobalamin biosynthetic process ; GO:0009236
Pfam:PF01890 CbiG_C > GO:cobalamin biosynthetic process ; GO:0009236
Pfam:PF01891 CbiM > GO:transition metal ion transport ; GO:0000041
Pfam:PF01891 CbiM > GO:integral component of membrane ; GO:0016021
Pfam:PF01896 DNA_primase_S > GO:DNA primase activity ; GO:0003896
Pfam:PF01896 DNA_primase_S > GO:DNA replication, synthesis of RNA primer ; GO:0006269
Pfam:PF01899 MNHE > GO:cation transmembrane transporter activity ; GO:0008324
Pfam:PF01899 MNHE > GO:cation transport ; GO:0006812
Pfam:PF01899 MNHE > GO:integral component of membrane ; GO:0016021
Pfam:PF01900 RNase_P_Rpp14 > GO:ribonuclease activity ; GO:0004540
Pfam:PF01900 RNase_P_Rpp14 > GO:tRNA processing ; GO:0008033
Pfam:PF01903 CbiX > GO:sirohydrochlorin cobaltochelatase activity ; GO:0016852
Pfam:PF01903 CbiX > GO:cobalamin biosynthetic process ; GO:0009236
Pfam:PF01907 Ribosomal_L37e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01907 Ribosomal_L37e > GO:translation ; GO:0006412
Pfam:PF01907 Ribosomal_L37e > GO:intracellular ; GO:0005622
Pfam:PF01907 Ribosomal_L37e > GO:ribosome ; GO:0005840
Pfam:PF01909 NTP_transf_2 > GO:nucleotidyltransferase activity ; GO:0016779
Pfam:PF01912 eIF-6 > GO:ribosome binding ; GO:0043022
Pfam:PF01912 eIF-6 > GO:mature ribosome assembly ; GO:0042256
Pfam:PF01913 FTR > GO:transferase activity ; GO:0016740
Pfam:PF01913 FTR > GO:one-carbon metabolic process ; GO:0006730
Pfam:PF01914 MarC > GO:integral component of membrane ; GO:0016021
Pfam:PF01915 Glyco_hydro_3_C > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF01915 Glyco_hydro_3_C > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF01916 DS > GO:peptidyl-lysine modification to peptidyl-hypusine ; GO:0008612
Pfam:PF01917 Arch_flagellin > GO:structural molecule activity ; GO:0005198
Pfam:PF01917 Arch_flagellin > GO:cellular component movement ; GO:0006928
Pfam:PF01918 Alba > GO:nucleic acid binding ; GO:0003676
Pfam:PF01920 Prefoldin_2 > GO:unfolded protein binding ; GO:0051082
Pfam:PF01920 Prefoldin_2 > GO:protein folding ; GO:0006457
Pfam:PF01920 Prefoldin_2 > GO:prefoldin complex ; GO:0016272
Pfam:PF01921 tRNA-synt_1f > GO:nucleotide binding ; GO:0000166
Pfam:PF01921 tRNA-synt_1f > GO:lysine-tRNA ligase activity ; GO:0004824
Pfam:PF01921 tRNA-synt_1f > GO:ATP binding ; GO:0005524
Pfam:PF01921 tRNA-synt_1f > GO:lysyl-tRNA aminoacylation ; GO:0006430
Pfam:PF01921 tRNA-synt_1f > GO:cytoplasm ; GO:0005737
Pfam:PF01922 SRP19 > GO:7S RNA binding ; GO:0008312
Pfam:PF01922 SRP19 > GO:SRP-dependent cotranslational protein targeting to membrane ; GO:0006614
Pfam:PF01922 SRP19 > GO:signal recognition particle ; GO:0048500
Pfam:PF01924 HypD > GO:metal ion binding ; GO:0046872
Pfam:PF01925 TauE > GO:integral component of membrane ; GO:0016021
Pfam:PF01926 MMR_HSR1 > GO:GTP binding ; GO:0005525
Pfam:PF01929 Ribosomal_L14e > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF01929 Ribosomal_L14e > GO:translation ; GO:0006412
Pfam:PF01929 Ribosomal_L14e > GO:intracellular ; GO:0005622
Pfam:PF01929 Ribosomal_L14e > GO:ribosome ; GO:0005840
Pfam:PF01940 DUF92 > GO:integral component of membrane ; GO:0016021
Pfam:PF01943 Polysacc_synt > GO:polysaccharide biosynthetic process ; GO:0000271
Pfam:PF01943 Polysacc_synt > GO:membrane ; GO:0016020
Pfam:PF01956 DUF106 > GO:membrane ; GO:0016020
Pfam:PF01958 DUF108 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF01958 DUF108 > GO:NADP catabolic process ; GO:0006742
Pfam:PF01958 DUF108 > GO:pyridine nucleotide biosynthetic process ; GO:0019363
Pfam:PF01958 DUF108 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01959 DHQS > GO:3-dehydroquinate synthase activity ; GO:0003856
Pfam:PF01959 DHQS > GO:oxidoreductase activity ; GO:0016491
Pfam:PF01959 DHQS > GO:aromatic amino acid family biosynthetic process ; GO:0009073
Pfam:PF01959 DHQS > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01960 ArgJ > GO:glutamate N-acetyltransferase activity ; GO:0004358
Pfam:PF01960 ArgJ > GO:arginine biosynthetic process ; GO:0006526
Pfam:PF01964 ThiC > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF01964 ThiC > GO:thiamine biosynthetic process ; GO:0009228
Pfam:PF01967 MoaC > GO:Mo-molybdopterin cofactor biosynthetic process ; GO:0006777
Pfam:PF01968 Hydantoinase_A > GO:hydrolase activity ; GO:0016787
Pfam:PF01972 SDH_sah > GO:integral component of membrane ; GO:0016021
Pfam:PF01974 tRNA_int_endo > GO:tRNA-intron endonuclease activity ; GO:0000213
Pfam:PF01974 tRNA_int_endo > GO:tRNA splicing, via endonucleolytic cleavage and ligation ; GO:0006388
Pfam:PF01975 SurE > GO:hydrolase activity ; GO:0016787
Pfam:PF01977 UbiD > GO:carboxy-lyase activity ; GO:0016831
Pfam:PF01977 UbiD > GO:ubiquinone biosynthetic process ; GO:0006744
Pfam:PF01977 UbiD > GO:plasma membrane ; GO:0005886
Pfam:PF01979 Amidohydro_1 > GO:hydrolase activity ; GO:0016787
Pfam:PF01981 PTH2 > GO:aminoacyl-tRNA hydrolase activity ; GO:0004045
Pfam:PF01982 CTP-dep_RFKase > GO:phosphotransferase activity, alcohol group as acceptor ; GO:0016773
Pfam:PF01983 CofC > GO:nucleotidyltransferase activity ; GO:0016779
Pfam:PF01984 dsDNA_bind > GO:DNA binding ; GO:0003677
Pfam:PF01985 CRS1_YhbY > GO:RNA binding ; GO:0003723
Pfam:PF01990 ATP-synt_F > GO:ion transmembrane transport ; GO:0034220
Pfam:PF01991 vATP-synt_E > GO:proton-transporting ATPase activity, rotational mechanism ; GO:0046961
Pfam:PF01991 vATP-synt_E > GO:ATP hydrolysis coupled proton transport ; GO:0015991
Pfam:PF01991 vATP-synt_E > GO:proton-transporting two-sector ATPase complex, catalytic domain ; GO:0033178
Pfam:PF01993 MTD > GO:ferredoxin hydrogenase activity ; GO:0008901
Pfam:PF01993 MTD > GO:methanogenesis ; GO:0015948
Pfam:PF01993 MTD > GO:oxidation-reduction process ; GO:0055114
Pfam:PF01994 Trm56 > GO:tRNA methyltransferase activity ; GO:0008175
Pfam:PF01994 Trm56 > GO:tRNA nucleoside ribose methylation ; GO:0002128
Pfam:PF01994 Trm56 > GO:cytoplasm ; GO:0005737
Pfam:PF01997 Translin > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF02005 TRM > GO:RNA binding ; GO:0003723
Pfam:PF02005 TRM > GO:tRNA (guanine-N2-)-methyltransferase activity ; GO:0004809
Pfam:PF02005 TRM > GO:tRNA processing ; GO:0008033
Pfam:PF02007 MtrH > GO:methyltransferase activity ; GO:0008168
Pfam:PF02007 MtrH > GO:one-carbon metabolic process ; GO:0006730
Pfam:PF02008 zf-CXXC > GO:DNA binding ; GO:0003677
Pfam:PF02008 zf-CXXC > GO:zinc ion binding ; GO:0008270
Pfam:PF02011 Glyco_hydro_48 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF02011 Glyco_hydro_48 > GO:cellulase activity ; GO:0008810
Pfam:PF02011 Glyco_hydro_48 > GO:cellulose catabolic process ; GO:0030245
Pfam:PF02015 Glyco_hydro_45 > GO:cellulase activity ; GO:0008810
Pfam:PF02015 Glyco_hydro_45 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02017 CIDE-N > GO:apoptotic process ; GO:0006915
Pfam:PF02017 CIDE-N > GO:intracellular ; GO:0005622
Pfam:PF02018 CBM_4_9 > GO:hydrolase activity, acting on glycosyl bonds ; GO:0016798
Pfam:PF02020 W2 > GO:protein binding ; GO:0005515
Pfam:PF02022 Integrase_Zn > GO:zinc ion binding ; GO:0008270
Pfam:PF02023 SCAN > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF02023 SCAN > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02023 SCAN > GO:nucleus ; GO:0005634
Pfam:PF02024 Leptin > GO:hormone activity ; GO:0005179
Pfam:PF02024 Leptin > GO:signal transduction ; GO:0007165
Pfam:PF02024 Leptin > GO:extracellular region ; GO:0005576
Pfam:PF02025 IL5 > GO:interleukin-5 receptor binding ; GO:0005137
Pfam:PF02025 IL5 > GO:growth factor activity ; GO:0008083
Pfam:PF02025 IL5 > GO:immune response ; GO:0006955
Pfam:PF02025 IL5 > GO:extracellular region ; GO:0005576
Pfam:PF02028 BCCT > GO:transporter activity ; GO:0005215
Pfam:PF02028 BCCT > GO:transport ; GO:0006810
Pfam:PF02028 BCCT > GO:membrane ; GO:0016020
Pfam:PF02031 Peptidase_M7 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF02031 Peptidase_M7 > GO:zinc ion binding ; GO:0008270
Pfam:PF02031 Peptidase_M7 > GO:proteolysis ; GO:0006508
Pfam:PF02031 Peptidase_M7 > GO:extracellular region ; GO:0005576
Pfam:PF02033 RBFA > GO:rRNA processing ; GO:0006364
Pfam:PF02035 Coagulin > GO:hemolymph coagulation ; GO:0042381
Pfam:PF02035 Coagulin > GO:extracellular region ; GO:0005576
Pfam:PF02037 SAP > GO:nucleic acid binding ; GO:0003676
Pfam:PF02038 ATP1G1_PLM_MAT8 > GO:ion channel activity ; GO:0005216
Pfam:PF02038 ATP1G1_PLM_MAT8 > GO:ion transport ; GO:0006811
Pfam:PF02038 ATP1G1_PLM_MAT8 > GO:membrane ; GO:0016020
Pfam:PF02040 ArsB > GO:arsenite transmembrane transporter activity ; GO:0015105
Pfam:PF02040 ArsB > GO:arsenite transport ; GO:0015700
Pfam:PF02040 ArsB > GO:integral component of membrane ; GO:0016021
Pfam:PF02041 Auxin_BP > GO:receptor activity ; GO:0004872
Pfam:PF02041 Auxin_BP > GO:endoplasmic reticulum lumen ; GO:0005788
Pfam:PF02043 Bac_chlorC > GO:photosynthesis ; GO:0015979
Pfam:PF02044 Bombesin > GO:neuropeptide signaling pathway ; GO:0007218
Pfam:PF02045 CBFB_NFYA > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF02045 CBFB_NFYA > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02046 COX6A > GO:cytochrome-c oxidase activity ; GO:0004129
Pfam:PF02046 COX6A > GO:mitochondrial inner membrane ; GO:0005743
Pfam:PF02046 COX6A > GO:mitochondrial respiratory chain complex IV ; GO:0005751
Pfam:PF02048 Enterotoxin_ST > GO:pathogenesis ; GO:0009405
Pfam:PF02048 Enterotoxin_ST > GO:extracellular region ; GO:0005576
Pfam:PF02049 FliE > GO:motor activity ; GO:0003774
Pfam:PF02049 FliE > GO:structural molecule activity ; GO:0005198
Pfam:PF02049 FliE > GO:bacterial-type flagellum-dependent cell motility ; GO:0071973
Pfam:PF02049 FliE > GO:bacterial-type flagellum ; GO:0009288
Pfam:PF02052 Gallidermin > GO:defense response to bacterium ; GO:0042742
Pfam:PF02052 Gallidermin > GO:extracellular region ; GO:0005576
Pfam:PF02053 Gene66 > GO:zinc ion binding ; GO:0008270
Pfam:PF02055 Glyco_hydro_30 > GO:glucosylceramidase activity ; GO:0004348
Pfam:PF02055 Glyco_hydro_30 > GO:sphingolipid metabolic process ; GO:0006665
Pfam:PF02056 Glyco_hydro_4 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF02056 Glyco_hydro_4 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02057 Glyco_hydro_59 > GO:galactosylceramidase activity ; GO:0004336
Pfam:PF02057 Glyco_hydro_59 > GO:galactosylceramide catabolic process ; GO:0006683
Pfam:PF02058 Guanylin > GO:guanylate cyclase activator activity ; GO:0030250
Pfam:PF02058 Guanylin > GO:extracellular region ; GO:0005576
Pfam:PF02059 IL3 > GO:interleukin-3 receptor binding ; GO:0005135
Pfam:PF02059 IL3 > GO:growth factor activity ; GO:0008083
Pfam:PF02059 IL3 > GO:immune response ; GO:0006955
Pfam:PF02059 IL3 > GO:extracellular region ; GO:0005576
Pfam:PF02060 ISK_Channel > GO:voltage-gated potassium channel activity ; GO:0005249
Pfam:PF02060 ISK_Channel > GO:ion transport ; GO:0006811
Pfam:PF02060 ISK_Channel > GO:membrane ; GO:0016020
Pfam:PF02063 MARCKS > GO:calmodulin binding ; GO:0005516
Pfam:PF02064 MAS20 > GO:protein targeting ; GO:0006605
Pfam:PF02064 MAS20 > GO:intracellular protein transport ; GO:0006886
Pfam:PF02064 MAS20 > GO:mitochondrial outer membrane translocase complex ; GO:0005742
Pfam:PF02065 Melibiase > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF02065 Melibiase > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02066 Metallothio_11 > GO:copper ion binding ; GO:0005507
Pfam:PF02067 Metallothio_5 > GO:metal ion binding ; GO:0046872
Pfam:PF02068 Metallothio_PEC > GO:zinc ion binding ; GO:0008270
Pfam:PF02069 Metallothio_Pro > GO:metal ion binding ; GO:0046872
Pfam:PF02070 NMU > GO:regulation of smooth muscle contraction ; GO:0006940
Pfam:PF02071 NSF > GO:intracellular protein transport ; GO:0006886
Pfam:PF02072 Orexin > GO:neuropeptide signaling pathway ; GO:0007218
Pfam:PF02072 Orexin > GO:feeding behavior ; GO:0007631
Pfam:PF02073 Peptidase_M29 > GO:aminopeptidase activity ; GO:0004177
Pfam:PF02073 Peptidase_M29 > GO:proteolysis ; GO:0006508
Pfam:PF02074 Peptidase_M32 > GO:metallocarboxypeptidase activity ; GO:0004181
Pfam:PF02074 Peptidase_M32 > GO:proteolysis ; GO:0006508
Pfam:PF02075 RuvC > GO:endodeoxyribonuclease activity ; GO:0004520
Pfam:PF02075 RuvC > GO:DNA repair ; GO:0006281
Pfam:PF02075 RuvC > GO:DNA recombination ; GO:0006310
Pfam:PF02076 STE3 > GO:mating-type factor pheromone receptor activity ; GO:0004932
Pfam:PF02076 STE3 > GO:G-protein coupled receptor signaling pathway ; GO:0007186
Pfam:PF02076 STE3 > GO:integral component of membrane ; GO:0016021
Pfam:PF02077 SURF4 > GO:integral component of membrane ; GO:0016021
Pfam:PF02079 TP1 > GO:DNA binding ; GO:0003677
Pfam:PF02079 TP1 > GO:spermatogenesis ; GO:0007283
Pfam:PF02079 TP1 > GO:nucleosome ; GO:0000786
Pfam:PF02079 TP1 > GO:nucleus ; GO:0005634
Pfam:PF02080 TrkA_C > GO:cation transmembrane transporter activity ; GO:0008324
Pfam:PF02080 TrkA_C > GO:potassium ion transport ; GO:0006813
Pfam:PF02083 Urotensin_II > GO:hormone activity ; GO:0005179
Pfam:PF02083 Urotensin_II > GO:regulation of blood pressure ; GO:0008217
Pfam:PF02083 Urotensin_II > GO:regulation of vasodilation ; GO:0042312
Pfam:PF02083 Urotensin_II > GO:extracellular region ; GO:0005576
Pfam:PF02084 Bindin > GO:fusion of sperm to egg plasma membrane ; GO:0007342
Pfam:PF02085 Cytochrom_CIII > GO:electron carrier activity ; GO:0009055
Pfam:PF02085 Cytochrom_CIII > GO:heme binding ; GO:0020037
Pfam:PF02086 MethyltransfD12 > GO:site-specific DNA-methyltransferase (adenine-specific) activity ; GO:0009007
Pfam:PF02086 MethyltransfD12 > GO:DNA methylation on adenine ; GO:0032775
Pfam:PF02087 Nitrophorin > GO:histamine binding ; GO:0051381
Pfam:PF02087 Nitrophorin > GO:nitric oxide binding ; GO:0070026
Pfam:PF02088 Ornatin > GO:cell adhesion ; GO:0007155
Pfam:PF02088 Ornatin > GO:regulation of blood coagulation ; GO:0030193
Pfam:PF02088 Ornatin > GO:extracellular region ; GO:0005576
Pfam:PF02089 Palm_thioest > GO:palmitoyl-(protein) hydrolase activity ; GO:0008474
Pfam:PF02089 Palm_thioest > GO:cellular protein modification process ; GO:0006464
Pfam:PF02091 tRNA-synt_2e > GO:nucleotide binding ; GO:0000166
Pfam:PF02091 tRNA-synt_2e > GO:glycine-tRNA ligase activity ; GO:0004820
Pfam:PF02091 tRNA-synt_2e > GO:ATP binding ; GO:0005524
Pfam:PF02091 tRNA-synt_2e > GO:glycyl-tRNA aminoacylation ; GO:0006426
Pfam:PF02091 tRNA-synt_2e > GO:cytoplasm ; GO:0005737
Pfam:PF02092 tRNA_synt_2f > GO:nucleotide binding ; GO:0000166
Pfam:PF02092 tRNA_synt_2f > GO:glycine-tRNA ligase activity ; GO:0004820
Pfam:PF02092 tRNA_synt_2f > GO:ATP binding ; GO:0005524
Pfam:PF02092 tRNA_synt_2f > GO:glycyl-tRNA aminoacylation ; GO:0006426
Pfam:PF02092 tRNA_synt_2f > GO:cytoplasm ; GO:0005737
Pfam:PF02093 Gag_p30 > GO:virion assembly ; GO:0019068
Pfam:PF02095 Extensin_1 > GO:structural constituent of cell wall ; GO:0005199
Pfam:PF02096 60KD_IMP > GO:protein insertion into membrane ; GO:0051205
Pfam:PF02096 60KD_IMP > GO:integral component of membrane ; GO:0016021
Pfam:PF02099 Josephin > GO:omega peptidase activity ; GO:0008242
Pfam:PF02100 ODC_AZ > GO:enzyme inhibitor activity ; GO:0004857
Pfam:PF02100 ODC_AZ > GO:ornithine decarboxylase inhibitor activity ; GO:0008073
Pfam:PF02101 Ocular_alb > GO:membrane ; GO:0016020
Pfam:PF02102 Peptidase_M35 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF02102 Peptidase_M35 > GO:proteolysis ; GO:0006508
Pfam:PF02104 SURF1 > GO:membrane ; GO:0016020
Pfam:PF02106 Fanconi_C > GO:DNA repair ; GO:0006281
Pfam:PF02107 FlgH > GO:motor activity ; GO:0003774
Pfam:PF02107 FlgH > GO:bacterial-type flagellum-dependent cell motility ; GO:0071973
Pfam:PF02107 FlgH > GO:bacterial-type flagellum basal body, distal rod, L ring ; GO:0009427
Pfam:PF02109 DAD > GO:dolichyl-diphosphooligosaccharide-protein glycotransferase activity ; GO:0004579
Pfam:PF02109 DAD > GO:oligosaccharyltransferase complex ; GO:0008250
Pfam:PF02109 DAD > GO:integral component of membrane ; GO:0016021
Pfam:PF02110 HK > GO:hydroxyethylthiazole kinase activity ; GO:0004417
Pfam:PF02110 HK > GO:thiamine biosynthetic process ; GO:0009228
Pfam:PF02112 PDEase_II > GO:3',5'-cyclic-AMP phosphodiesterase activity ; GO:0004115
Pfam:PF02112 PDEase_II > GO:cAMP catabolic process ; GO:0006198
Pfam:PF02113 Peptidase_S13 > GO:serine-type carboxypeptidase activity ; GO:0004185
Pfam:PF02113 Peptidase_S13 > GO:proteolysis ; GO:0006508
Pfam:PF02115 Rho_GDI > GO:Rho GDP-dissociation inhibitor activity ; GO:0005094
Pfam:PF02115 Rho_GDI > GO:cytoplasm ; GO:0005737
Pfam:PF02116 STE2 > GO:mating-type factor pheromone receptor activity ; GO:0004932
Pfam:PF02116 STE2 > GO:G-protein coupled receptor signaling pathway ; GO:0007186
Pfam:PF02116 STE2 > GO:membrane ; GO:0016020
Pfam:PF02117 7TM_GPCR_Sra > GO:G-protein coupled receptor activity ; GO:0004930
Pfam:PF02117 7TM_GPCR_Sra > GO:sensory perception of chemical stimulus ; GO:0007606
Pfam:PF02117 7TM_GPCR_Sra > GO:integral component of membrane ; GO:0016021
Pfam:PF02118 Srg > GO:transmembrane signaling receptor activity ; GO:0004888
Pfam:PF02118 Srg > GO:sensory perception of chemical stimulus ; GO:0007606
Pfam:PF02118 Srg > GO:membrane ; GO:0016020
Pfam:PF02119 FlgI > GO:structural molecule activity ; GO:0005198
Pfam:PF02119 FlgI > GO:bacterial-type flagellum-dependent cell motility ; GO:0071973
Pfam:PF02119 FlgI > GO:bacterial-type flagellum basal body, distal rod, P ring ; GO:0009428
Pfam:PF02119 FlgI > GO:outer membrane-bounded periplasmic space ; GO:0030288
Pfam:PF02121 IP_trans > GO:transport ; GO:0006810
Pfam:PF02121 IP_trans > GO:intracellular ; GO:0005622
Pfam:PF02122 Peptidase_S39 > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF02122 Peptidase_S39 > GO:viral process ; GO:0016032
Pfam:PF02122 Peptidase_S39 > GO:integral component of membrane ; GO:0016021
Pfam:PF02123 RdRP_4 > GO:RNA binding ; GO:0003723
Pfam:PF02123 RdRP_4 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF02123 RdRP_4 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF02126 PTE > GO:zinc ion binding ; GO:0008270
Pfam:PF02126 PTE > GO:catabolic process ; GO:0009056
Pfam:PF02127 Peptidase_M18 > GO:aminopeptidase activity ; GO:0004177
Pfam:PF02127 Peptidase_M18 > GO:zinc ion binding ; GO:0008270
Pfam:PF02127 Peptidase_M18 > GO:proteolysis ; GO:0006508
Pfam:PF02128 Peptidase_M36 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF02128 Peptidase_M36 > GO:zinc ion binding ; GO:0008270
Pfam:PF02128 Peptidase_M36 > GO:extracellular space ; GO:0005615
Pfam:PF02129 Peptidase_S15 > GO:hydrolase activity ; GO:0016787
Pfam:PF02130 UPF0054 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF02130 UPF0054 > GO:rRNA processing ; GO:0006364
Pfam:PF02133 Transp_cyt_pur > GO:nucleobase transmembrane transporter activity ; GO:0015205
Pfam:PF02133 Transp_cyt_pur > GO:nucleobase transport ; GO:0015851
Pfam:PF02133 Transp_cyt_pur > GO:membrane ; GO:0016020
Pfam:PF02134 UBACT > GO:ATP binding ; GO:0005524
Pfam:PF02134 UBACT > GO:small protein activating enzyme activity ; GO:0008641
Pfam:PF02134 UBACT > GO:cellular protein modification process ; GO:0006464
Pfam:PF02135 zf-TAZ > GO:transcription cofactor activity ; GO:0003712
Pfam:PF02135 zf-TAZ > GO:histone acetyltransferase activity ; GO:0004402
Pfam:PF02135 zf-TAZ > GO:zinc ion binding ; GO:0008270
Pfam:PF02135 zf-TAZ > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02135 zf-TAZ > GO:nucleus ; GO:0005634
Pfam:PF02136 NTF2 > GO:transport ; GO:0006810
Pfam:PF02136 NTF2 > GO:intracellular ; GO:0005622
Pfam:PF02137 A_deamin > GO:RNA binding ; GO:0003723
Pfam:PF02137 A_deamin > GO:adenosine deaminase activity ; GO:0004000
Pfam:PF02137 A_deamin > GO:RNA processing ; GO:0006396
Pfam:PF02140 Gal_Lectin > GO:carbohydrate binding ; GO:0030246
Pfam:PF02144 Rad1 > GO:DNA repair ; GO:0006281
Pfam:PF02144 Rad1 > GO:nucleus ; GO:0005634
Pfam:PF02145 Rap_GAP > GO:GTPase activator activity ; GO:0005096
Pfam:PF02145 Rap_GAP > GO:regulation of small GTPase mediated signal transduction ; GO:0051056
Pfam:PF02146 SIR2 > GO:NAD+ binding ; GO:0070403
Pfam:PF02148 zf-UBP > GO:zinc ion binding ; GO:0008270
Pfam:PF02150 RNA_POL_M_15KD > GO:DNA binding ; GO:0003677
Pfam:PF02150 RNA_POL_M_15KD > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF02150 RNA_POL_M_15KD > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF02151 UVR > GO:protein binding ; GO:0005515
Pfam:PF02152 FolB > GO:dihydroneopterin aldolase activity ; GO:0004150
Pfam:PF02152 FolB > GO:folic acid-containing compound metabolic process ; GO:0006760
Pfam:PF02153 PDH > GO:prephenate dehydrogenase (NADP+) activity ; GO:0004665
Pfam:PF02153 PDH > GO:prephenate dehydrogenase activity ; GO:0008977
Pfam:PF02153 PDH > GO:tyrosine biosynthetic process ; GO:0006571
Pfam:PF02153 PDH > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02154 FliM > GO:motor activity ; GO:0003774
Pfam:PF02154 FliM > GO:bacterial-type flagellum-dependent cell motility ; GO:0071973
Pfam:PF02154 FliM > GO:bacterial-type flagellum basal body ; GO:0009425
Pfam:PF02155 GCR > GO:DNA binding ; GO:0003677
Pfam:PF02155 GCR > GO:glucocorticoid receptor activity ; GO:0004883
Pfam:PF02155 GCR > GO:steroid binding ; GO:0005496
Pfam:PF02155 GCR > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02155 GCR > GO:glucocorticoid receptor signaling pathway ; GO:0042921
Pfam:PF02155 GCR > GO:glucocorticoid mediated signaling pathway ; GO:0043402
Pfam:PF02155 GCR > GO:nucleus ; GO:0005634
Pfam:PF02156 Glyco_hydro_26 > GO:cellulase activity ; GO:0008810
Pfam:PF02156 Glyco_hydro_26 > GO:mannan endo-1,4-beta-mannosidase activity ; GO:0016985
Pfam:PF02156 Glyco_hydro_26 > GO:substituted mannan metabolic process ; GO:0006080
Pfam:PF02158 Neuregulin > GO:receptor binding ; GO:0005102
Pfam:PF02158 Neuregulin > GO:embryo development ; GO:0009790
Pfam:PF02159 Oest_recep > GO:DNA binding ; GO:0003677
Pfam:PF02159 Oest_recep > GO:steroid binding ; GO:0005496
Pfam:PF02159 Oest_recep > GO:estrogen receptor activity ; GO:0030284
Pfam:PF02159 Oest_recep > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02159 Oest_recep > GO:steroid hormone mediated signaling pathway ; GO:0043401
Pfam:PF02159 Oest_recep > GO:nucleus ; GO:0005634
Pfam:PF02160 Peptidase_A3 > GO:aspartic-type endopeptidase activity ; GO:0004190
Pfam:PF02160 Peptidase_A3 > GO:proteolysis ; GO:0006508
Pfam:PF02161 Prog_receptor > GO:DNA binding ; GO:0003677
Pfam:PF02161 Prog_receptor > GO:steroid hormone receptor activity ; GO:0003707
Pfam:PF02161 Prog_receptor > GO:steroid binding ; GO:0005496
Pfam:PF02161 Prog_receptor > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02161 Prog_receptor > GO:steroid hormone mediated signaling pathway ; GO:0043401
Pfam:PF02161 Prog_receptor > GO:nucleus ; GO:0005634
Pfam:PF02163 Peptidase_M50 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF02163 Peptidase_M50 > GO:proteolysis ; GO:0006508
Pfam:PF02165 WT1 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02165 WT1 > GO:nucleus ; GO:0005634
Pfam:PF02166 Androgen_recep > GO:DNA binding ; GO:0003677
Pfam:PF02166 Androgen_recep > GO:androgen receptor activity ; GO:0004882
Pfam:PF02166 Androgen_recep > GO:steroid binding ; GO:0005496
Pfam:PF02166 Androgen_recep > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02166 Androgen_recep > GO:androgen receptor signaling pathway ; GO:0030521
Pfam:PF02166 Androgen_recep > GO:nucleus ; GO:0005634
Pfam:PF02167 Cytochrom_C1 > GO:iron ion binding ; GO:0005506
Pfam:PF02167 Cytochrom_C1 > GO:electron carrier activity ; GO:0009055
Pfam:PF02167 Cytochrom_C1 > GO:heme binding ; GO:0020037
Pfam:PF02170 PAZ > GO:protein binding ; GO:0005515
Pfam:PF02171 Piwi > GO:protein binding ; GO:0005515
Pfam:PF02172 KIX > GO:transcription cofactor activity ; GO:0003712
Pfam:PF02172 KIX > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02173 pKID > GO:protein binding ; GO:0005515
Pfam:PF02173 pKID > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02174 IRS > GO:insulin receptor binding ; GO:0005158
Pfam:PF02175 7TM_GPCR_Srb > GO:transmembrane signaling receptor activity ; GO:0004888
Pfam:PF02175 7TM_GPCR_Srb > GO:sensory perception of chemical stimulus ; GO:0007606
Pfam:PF02175 7TM_GPCR_Srb > GO:integral component of membrane ; GO:0016021
Pfam:PF02177 APP_N > GO:heparin binding ; GO:0008201
Pfam:PF02178 AT_hook > GO:DNA binding ; GO:0003677
Pfam:PF02179 BAG > GO:chaperone binding ; GO:0051087
Pfam:PF02180 BH4 > GO:regulation of apoptotic process ; GO:0042981
Pfam:PF02182 SAD_SRA > GO:histone binding ; GO:0042393
Pfam:PF02183 HALZ > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF02183 HALZ > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF02183 HALZ > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02183 HALZ > GO:nucleus ; GO:0005634
Pfam:PF02184 HAT > GO:RNA processing ; GO:0006396
Pfam:PF02184 HAT > GO:intracellular ; GO:0005622
Pfam:PF02185 HR1 > GO:signal transduction ; GO:0007165
Pfam:PF02186 TFIIE_beta > GO:transcription initiation from RNA polymerase II promoter ; GO:0006367
Pfam:PF02186 TFIIE_beta > GO:transcription factor TFIIE complex ; GO:0005673
Pfam:PF02187 GAS2 > GO:cell cycle arrest ; GO:0007050
Pfam:PF02188 GoLoco > GO:GTPase regulator activity ; GO:0030695
Pfam:PF02189 ITAM > GO:transmembrane signaling receptor activity ; GO:0004888
Pfam:PF02189 ITAM > GO:cell surface receptor signaling pathway ; GO:0007166
Pfam:PF02189 ITAM > GO:membrane ; GO:0016020
Pfam:PF02190 LON > GO:ATP-dependent peptidase activity ; GO:0004176
Pfam:PF02190 LON > GO:proteolysis ; GO:0006508
Pfam:PF02191 OLF > GO:protein binding ; GO:0005515
Pfam:PF02196 RBD > GO:receptor signaling protein activity ; GO:0005057
Pfam:PF02196 RBD > GO:signal transduction ; GO:0007165
Pfam:PF02198 SAM_PNT > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF02198 SAM_PNT > GO:nucleus ; GO:0005634
Pfam:PF02200 STE > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF02200 STE > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02200 STE > GO:nucleus ; GO:0005634
Pfam:PF02201 SWIB > GO:protein binding ; GO:0005515
Pfam:PF02202 Tachykinin > GO:tachykinin receptor signaling pathway ; GO:0007217
Pfam:PF02202 Tachykinin > GO:synaptic transmission ; GO:0007268
Pfam:PF02203 TarH > GO:transmembrane signaling receptor activity ; GO:0004888
Pfam:PF02203 TarH > GO:chemotaxis ; GO:0006935
Pfam:PF02203 TarH > GO:signal transduction ; GO:0007165
Pfam:PF02203 TarH > GO:membrane ; GO:0016020
Pfam:PF02205 WH2 > GO:actin binding ; GO:0003779
Pfam:PF02207 zf-UBR > GO:ubiquitin-protein transferase activity ; GO:0004842
Pfam:PF02207 zf-UBR > GO:zinc ion binding ; GO:0008270
Pfam:PF02209 VHP > GO:actin binding ; GO:0003779
Pfam:PF02209 VHP > GO:cytoskeleton organization ; GO:0007010
Pfam:PF02211 NHase_beta > GO:nitrile hydratase activity ; GO:0018822
Pfam:PF02212 GED > GO:GTPase activity ; GO:0003924
Pfam:PF02212 GED > GO:GTP binding ; GO:0005525
Pfam:PF02213 GYF > GO:protein binding ; GO:0005515
Pfam:PF02214 BTB_2 > GO:protein homooligomerization ; GO:0051260
Pfam:PF02216 B > GO:immunoglobulin binding ; GO:0019865
Pfam:PF02216 B > GO:pathogenesis ; GO:0009405
Pfam:PF02217 T_Ag_DNA_bind > GO:DNA replication origin binding ; GO:0003688
Pfam:PF02217 T_Ag_DNA_bind > GO:DNA replication ; GO:0006260
Pfam:PF02219 MTHFR > GO:methylenetetrahydrofolate reductase (NAD(P)H) activity ; GO:0004489
Pfam:PF02219 MTHFR > GO:methionine metabolic process ; GO:0006555
Pfam:PF02219 MTHFR > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02224 Cytidylate_kin > GO:cytidylate kinase activity ; GO:0004127
Pfam:PF02224 Cytidylate_kin > GO:ATP binding ; GO:0005524
Pfam:PF02224 Cytidylate_kin > GO:nucleobase-containing compound metabolic process ; GO:0006139
Pfam:PF02226 Pico_P1A > GO:structural molecule activity ; GO:0005198
Pfam:PF02226 Pico_P1A > GO:viral capsid ; GO:0019028
Pfam:PF02228 Gag_p19 > GO:structural molecule activity ; GO:0005198
Pfam:PF02228 Gag_p19 > GO:viral nucleocapsid ; GO:0019013
Pfam:PF02229 PC4 > GO:DNA binding ; GO:0003677
Pfam:PF02229 PC4 > GO:transcription coactivator activity ; GO:0003713
Pfam:PF02229 PC4 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02230 Abhydrolase_2 > GO:hydrolase activity ; GO:0016787
Pfam:PF02232 Alpha_TIF > GO:DNA binding ; GO:0003677
Pfam:PF02232 Alpha_TIF > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02233 PNTB > GO:NAD(P)+ transhydrogenase (AB-specific) activity ; GO:0008750
Pfam:PF02233 PNTB > GO:NADP binding ; GO:0050661
Pfam:PF02233 PNTB > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02233 PNTB > GO:integral component of membrane ; GO:0016021
Pfam:PF02234 CDI > GO:cyclin-dependent protein serine/threonine kinase inhibitor activity ; GO:0004861
Pfam:PF02234 CDI > GO:cell cycle arrest ; GO:0007050
Pfam:PF02234 CDI > GO:nucleus ; GO:0005634
Pfam:PF02236 Viral_DNA_bi > GO:DNA binding ; GO:0003677
Pfam:PF02236 Viral_DNA_bi > GO:DNA replication ; GO:0006260
Pfam:PF02236 Viral_DNA_bi > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF02236 Viral_DNA_bi > GO:host cell nucleus ; GO:0042025
Pfam:PF02237 BPL_C > GO:cellular protein modification process ; GO:0006464
Pfam:PF02238 COX7a > GO:cytochrome-c oxidase activity ; GO:0004129
Pfam:PF02238 COX7a > GO:electron carrier activity ; GO:0009055
Pfam:PF02238 COX7a > GO:mitochondrial respiratory chain ; GO:0005746
Pfam:PF02240 MCR_gamma > GO:coenzyme-B sulfoethylthiotransferase activity ; GO:0050524
Pfam:PF02240 MCR_gamma > GO:methanogenesis ; GO:0015948
Pfam:PF02241 MCR_beta > GO:coenzyme-B sulfoethylthiotransferase activity ; GO:0050524
Pfam:PF02244 Propep_M14 > GO:carboxypeptidase activity ; GO:0004180
Pfam:PF02244 Propep_M14 > GO:proteolysis ; GO:0006508
Pfam:PF02245 Pur_DNA_glyco > GO:DNA binding ; GO:0003677
Pfam:PF02245 Pur_DNA_glyco > GO:alkylbase DNA N-glycosylase activity ; GO:0003905
Pfam:PF02245 Pur_DNA_glyco > GO:base-excision repair ; GO:0006284
Pfam:PF02247 Como_LCP > GO:structural molecule activity ; GO:0005198
Pfam:PF02247 Como_LCP > GO:viral capsid ; GO:0019028
Pfam:PF02248 Como_SCP > GO:transport of virus in host, cell to cell ; GO:0046740
Pfam:PF02248 Como_SCP > GO:viral capsid ; GO:0019028
Pfam:PF02248 Como_SCP > GO:host cell plasmodesma ; GO:0044219
Pfam:PF02249 MCR_alpha > GO:coenzyme-B sulfoethylthiotransferase activity ; GO:0050524
Pfam:PF02249 MCR_alpha > GO:methanogenesis ; GO:0015948
Pfam:PF02251 PA28_alpha > GO:proteasome activator complex ; GO:0008537
Pfam:PF02252 PA28_beta > GO:proteasome activator complex ; GO:0008537
Pfam:PF02253 PLA1 > GO:phospholipase activity ; GO:0004620
Pfam:PF02253 PLA1 > GO:lipid metabolic process ; GO:0006629
Pfam:PF02253 PLA1 > GO:membrane ; GO:0016020
Pfam:PF02254 TrkA_N > GO:potassium ion transport ; GO:0006813
Pfam:PF02255 PTS_IIA > GO:phosphoenolpyruvate-dependent sugar phosphotransferase system ; GO:0009401
Pfam:PF02257 RFX_DNA_binding > GO:DNA binding ; GO:0003677
Pfam:PF02257 RFX_DNA_binding > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02258 SLT_beta > GO:hemolysis by symbiont of host erythrocytes ; GO:0019836
Pfam:PF02258 SLT_beta > GO:extracellular region ; GO:0005576
Pfam:PF02259 FAT > GO:protein binding ; GO:0005515
Pfam:PF02260 FATC > GO:protein binding ; GO:0005515
Pfam:PF02261 Asp_decarbox > GO:aspartate 1-decarboxylase activity ; GO:0004068
Pfam:PF02261 Asp_decarbox > GO:alanine biosynthetic process ; GO:0006523
Pfam:PF02262 Cbl_N > GO:signal transducer activity ; GO:0004871
Pfam:PF02262 Cbl_N > GO:cell surface receptor signaling pathway ; GO:0007166
Pfam:PF02262 Cbl_N > GO:nucleus ; GO:0005634
Pfam:PF02263 GBP > GO:GTPase activity ; GO:0003924
Pfam:PF02263 GBP > GO:GTP binding ; GO:0005525
Pfam:PF02264 LamB > GO:transport ; GO:0006810
Pfam:PF02264 LamB > GO:membrane ; GO:0016020
Pfam:PF02265 S1-P1_nuclease > GO:nucleic acid binding ; GO:0003676
Pfam:PF02265 S1-P1_nuclease > GO:endonuclease activity ; GO:0004519
Pfam:PF02265 S1-P1_nuclease > GO:DNA catabolic process ; GO:0006308
Pfam:PF02267 Rib_hydrolayse > GO:NAD+ nucleosidase activity ; GO:0003953
Pfam:PF02268 TFIIA_gamma_N > GO:transcription initiation from RNA polymerase II promoter ; GO:0006367
Pfam:PF02268 TFIIA_gamma_N > GO:transcription factor TFIIA complex ; GO:0005672
Pfam:PF02269 TFIID-18kDa > GO:transcription from RNA polymerase II promoter ; GO:0006366
Pfam:PF02270 TFIIF_beta > GO:ATP binding ; GO:0005524
Pfam:PF02270 TFIIF_beta > GO:transcription initiation from RNA polymerase II promoter ; GO:0006367
Pfam:PF02270 TFIIF_beta > GO:transcription factor TFIIF complex ; GO:0005674
Pfam:PF02271 UCR_14kD > GO:mitochondrial electron transport, ubiquinol to cytochrome c ; GO:0006122
Pfam:PF02271 UCR_14kD > GO:mitochondrial respiratory chain complex III ; GO:0005750
Pfam:PF02272 DHHA1 > GO:nucleic acid binding ; GO:0003676
Pfam:PF02273 Acyl_transf_2 > GO:transferase activity, transferring acyl groups ; GO:0016746
Pfam:PF02273 Acyl_transf_2 > GO:fatty acid metabolic process ; GO:0006631
Pfam:PF02274 Amidinotransf > GO:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines ; GO:0016813
Pfam:PF02274 Amidinotransf > GO:cytoplasm ; GO:0005737
Pfam:PF02276 CytoC_RC > GO:iron ion binding ; GO:0005506
Pfam:PF02276 CytoC_RC > GO:electron carrier activity ; GO:0009055
Pfam:PF02276 CytoC_RC > GO:heme binding ; GO:0020037
Pfam:PF02276 CytoC_RC > GO:photosynthesis, light reaction ; GO:0019684
Pfam:PF02276 CytoC_RC > GO:plasma membrane light-harvesting complex ; GO:0030077
Pfam:PF02277 DBI_PRT > GO:nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity ; GO:0008939
Pfam:PF02277 DBI_PRT > GO:cobalamin biosynthetic process ; GO:0009236
Pfam:PF02278 Lyase_8 > GO:lyase activity ; GO:0016829
Pfam:PF02278 Lyase_8 > GO:extracellular region ; GO:0005576
Pfam:PF02282 Herpes_UL42 > GO:DNA binding ; GO:0003677
Pfam:PF02282 Herpes_UL42 > GO:DNA replication ; GO:0006260
Pfam:PF02283 CobU > GO:nucleotide binding ; GO:0000166
Pfam:PF02283 CobU > GO:adenosylcobinamide kinase activity ; GO:0043752
Pfam:PF02283 CobU > GO:cobalamin biosynthetic process ; GO:0009236
Pfam:PF02283 CobU > GO:cofactor biosynthetic process ; GO:0051188
Pfam:PF02284 COX5A > GO:cytochrome-c oxidase activity ; GO:0004129
Pfam:PF02284 COX5A > GO:mitochondrial inner membrane ; GO:0005743
Pfam:PF02285 COX8 > GO:cytochrome-c oxidase activity ; GO:0004129
Pfam:PF02286 Dehydratase_LU > GO:hydro-lyase activity ; GO:0016836
Pfam:PF02286 Dehydratase_LU > GO:cobalamin binding ; GO:0031419
Pfam:PF02286 Dehydratase_LU > GO:propanediol dehydratase activity ; GO:0050215
Pfam:PF02286 Dehydratase_LU > GO:metabolic process ; GO:0008152
Pfam:PF02289 MCH > GO:methenyltetrahydromethanopterin cyclohydrolase activity ; GO:0018759
Pfam:PF02289 MCH > GO:one-carbon metabolic process ; GO:0006730
Pfam:PF02290 SRP14 > GO:7S RNA binding ; GO:0008312
Pfam:PF02290 SRP14 > GO:endoplasmic reticulum signal peptide binding ; GO:0030942
Pfam:PF02290 SRP14 > GO:SRP-dependent cotranslational protein targeting to membrane ; GO:0006614
Pfam:PF02290 SRP14 > GO:signal recognition particle, endoplasmic reticulum targeting ; GO:0005786
Pfam:PF02291 TFIID-31kDa > GO:DNA-templated transcription, initiation ; GO:0006352
Pfam:PF02293 AmiS_UreI > GO:transport ; GO:0006810
Pfam:PF02293 AmiS_UreI > GO:membrane ; GO:0016020
Pfam:PF02294 7kD_DNA_binding > GO:DNA binding ; GO:0003677
Pfam:PF02294 7kD_DNA_binding > GO:endoribonuclease activity ; GO:0004521
Pfam:PF02295 z-alpha > GO:RNA binding ; GO:0003723
Pfam:PF02295 z-alpha > GO:double-stranded RNA adenosine deaminase activity ; GO:0003726
Pfam:PF02296 Alpha_adaptin_C > GO:intracellular protein transport ; GO:0006886
Pfam:PF02296 Alpha_adaptin_C > GO:vesicle-mediated transport ; GO:0016192
Pfam:PF02296 Alpha_adaptin_C > GO:clathrin adaptor complex ; GO:0030131
Pfam:PF02297 COX6B > GO:cytochrome-c oxidase activity ; GO:0004129
Pfam:PF02297 COX6B > GO:mitochondrion ; GO:0005739
Pfam:PF02298 Cu_bind_like > GO:copper ion binding ; GO:0005507
Pfam:PF02298 Cu_bind_like > GO:electron carrier activity ; GO:0009055
Pfam:PF02300 Fumarate_red_C > GO:membrane ; GO:0016020
Pfam:PF02302 PTS_IIB > GO:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity ; GO:0008982
Pfam:PF02302 PTS_IIB > GO:phosphoenolpyruvate-dependent sugar phosphotransferase system ; GO:0009401
Pfam:PF02303 Phage_DNA_bind > GO:single-stranded DNA binding ; GO:0003697
Pfam:PF02303 Phage_DNA_bind > GO:DNA replication ; GO:0006260
Pfam:PF02304 Phage_B > GO:viral capsid assembly ; GO:0019069
Pfam:PF02304 Phage_B > GO:viral procapsid ; GO:0046729
Pfam:PF02305 Phage_F > GO:structural molecule activity ; GO:0005198
Pfam:PF02305 Phage_F > GO:viral capsid ; GO:0019028
Pfam:PF02306 Phage_G > GO:modulation by virus of host morphology or physiology ; GO:0019048
Pfam:PF02308 MgtC > GO:membrane ; GO:0016020
Pfam:PF02309 AUX_IAA > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02309 AUX_IAA > GO:nucleus ; GO:0005634
Pfam:PF02310 B12-binding > GO:cobalamin binding ; GO:0031419
Pfam:PF02310 B12-binding > GO:metal ion binding ; GO:0046872
Pfam:PF02311 AraC_binding > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02312 CBF_beta > GO:transcription coactivator activity ; GO:0003713
Pfam:PF02312 CBF_beta > GO:nucleus ; GO:0005634
Pfam:PF02313 Fumarate_red_D > GO:fumarate metabolic process ; GO:0006106
Pfam:PF02313 Fumarate_red_D > GO:membrane ; GO:0016020
Pfam:PF02315 MDH > GO:alcohol dehydrogenase (NAD) activity ; GO:0004022
Pfam:PF02315 MDH > GO:methanol oxidation ; GO:0015946
Pfam:PF02315 MDH > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02316 HTH_Tnp_Mu_1 > GO:DNA binding ; GO:0003677
Pfam:PF02317 Octopine_DH > GO:oxidoreductase activity ; GO:0016491
Pfam:PF02317 Octopine_DH > GO:coenzyme binding ; GO:0050662
Pfam:PF02317 Octopine_DH > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02318 FYVE_2 > GO:Rab GTPase binding ; GO:0017137
Pfam:PF02318 FYVE_2 > GO:intracellular protein transport ; GO:0006886
Pfam:PF02319 E2F_TDP > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF02319 E2F_TDP > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02319 E2F_TDP > GO:transcription factor complex ; GO:0005667
Pfam:PF02321 OEP > GO:transporter activity ; GO:0005215
Pfam:PF02321 OEP > GO:transport ; GO:0006810
Pfam:PF02322 Cyto_ox_2 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02322 Cyto_ox_2 > GO:membrane ; GO:0016020
Pfam:PF02323 ELH > GO:hormone activity ; GO:0005179
Pfam:PF02323 ELH > GO:multicellular organismal development ; GO:0007275
Pfam:PF02323 ELH > GO:extracellular region ; GO:0005576
Pfam:PF02324 Glyco_hydro_70 > GO:glucosyltransferase activity ; GO:0046527
Pfam:PF02324 Glyco_hydro_70 > GO:glucan biosynthetic process ; GO:0009250
Pfam:PF02325 YGGT > GO:membrane ; GO:0016020
Pfam:PF02327 BChl_A > GO:photosynthesis ; GO:0015979
Pfam:PF02329 HDC > GO:histidine decarboxylase activity ; GO:0004398
Pfam:PF02329 HDC > GO:histidine metabolic process ; GO:0006547
Pfam:PF02330 MAM33 > GO:mitochondrial matrix ; GO:0005759
Pfam:PF02331 P35 > GO:cysteine-type endopeptidase inhibitor activity involved in apoptotic process ; GO:0043027
Pfam:PF02331 P35 > GO:negative regulation of apoptotic process ; GO:0043066
Pfam:PF02332 Phenol_Hydrox > GO:cellular aromatic compound metabolic process ; GO:0006725
Pfam:PF02332 Phenol_Hydrox > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02333 Phytase > GO:3-phytase activity ; GO:0016158
Pfam:PF02334 RTP > GO:DNA binding ; GO:0003677
Pfam:PF02334 RTP > GO:DNA replication termination ; GO:0006274
Pfam:PF02335 Cytochrom_C552 > GO:nitrite reductase (cytochrome, ammonia-forming) activity ; GO:0042279
Pfam:PF02335 Cytochrom_C552 > GO:nitrogen compound metabolic process ; GO:0006807
Pfam:PF02335 Cytochrom_C552 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02335 Cytochrom_C552 > GO:periplasmic space ; GO:0042597
Pfam:PF02336 Denso_VP4 > GO:structural molecule activity ; GO:0005198
Pfam:PF02336 Denso_VP4 > GO:viral capsid ; GO:0019028
Pfam:PF02337 Gag_p10 > GO:structural molecule activity ; GO:0005198
Pfam:PF02337 Gag_p10 > GO:viral capsid ; GO:0019028
Pfam:PF02342 TerD > GO:response to stress ; GO:0006950
Pfam:PF02344 Myc-LZ > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF02344 Myc-LZ > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02344 Myc-LZ > GO:nucleus ; GO:0005634
Pfam:PF02346 Vac_Fusion > GO:fusion of virus membrane with host plasma membrane ; GO:0019064
Pfam:PF02346 Vac_Fusion > GO:viral envelope ; GO:0019031
Pfam:PF02347 GDC-P > GO:glycine dehydrogenase (decarboxylating) activity ; GO:0004375
Pfam:PF02347 GDC-P > GO:glycine catabolic process ; GO:0006546
Pfam:PF02347 GDC-P > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02348 CTP_transf_3 > GO:lipopolysaccharide biosynthetic process ; GO:0009103
Pfam:PF02350 Epimerase_2 > GO:UDP-N-acetylglucosamine metabolic process ; GO:0006047
Pfam:PF02353 CMAS > GO:lipid biosynthetic process ; GO:0008610
Pfam:PF02354 Latrophilin > GO:G-protein coupled receptor activity ; GO:0004930
Pfam:PF02354 Latrophilin > GO:G-protein coupled receptor signaling pathway ; GO:0007186
Pfam:PF02354 Latrophilin > GO:membrane ; GO:0016020
Pfam:PF02357 NusG > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02358 Trehalose_PPase > GO:catalytic activity ; GO:0003824
Pfam:PF02358 Trehalose_PPase > GO:trehalose biosynthetic process ; GO:0005992
Pfam:PF02362 B3 > GO:DNA binding ; GO:0003677
Pfam:PF02364 Glucan_synthase > GO:1,3-beta-D-glucan synthase activity ; GO:0003843
Pfam:PF02364 Glucan_synthase > GO:(1->3)-beta-D-glucan biosynthetic process ; GO:0006075
Pfam:PF02364 Glucan_synthase > GO:1,3-beta-D-glucan synthase complex ; GO:0000148
Pfam:PF02364 Glucan_synthase > GO:membrane ; GO:0016020
Pfam:PF02365 NAM > GO:DNA binding ; GO:0003677
Pfam:PF02365 NAM > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02366 PMT > GO:mannosyltransferase activity ; GO:0000030
Pfam:PF02366 PMT > GO:protein O-linked glycosylation ; GO:0006493
Pfam:PF02366 PMT > GO:membrane ; GO:0016020
Pfam:PF02367 UPF0079 > GO:threonylcarbamoyladenosine biosynthetic process ; GO:0070526
Pfam:PF02371 Transposase_20 > GO:DNA binding ; GO:0003677
Pfam:PF02371 Transposase_20 > GO:transposase activity ; GO:0004803
Pfam:PF02371 Transposase_20 > GO:transposition, DNA-mediated ; GO:0006313
Pfam:PF02372 IL15 > GO:cytokine receptor binding ; GO:0005126
Pfam:PF02372 IL15 > GO:immune response ; GO:0006955
Pfam:PF02372 IL15 > GO:extracellular region ; GO:0005576
Pfam:PF02376 CUT > GO:DNA binding ; GO:0003677
Pfam:PF02378 PTS_EIIC > GO:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity ; GO:0008982
Pfam:PF02378 PTS_EIIC > GO:phosphoenolpyruvate-dependent sugar phosphotransferase system ; GO:0009401
Pfam:PF02378 PTS_EIIC > GO:membrane ; GO:0016020
Pfam:PF02382 RTX > GO:calcium ion binding ; GO:0005509
Pfam:PF02382 RTX > GO:pathogenesis ; GO:0009405
Pfam:PF02382 RTX > GO:extracellular region ; GO:0005576
Pfam:PF02383 Syja_N > GO:phosphoric ester hydrolase activity ; GO:0042578
Pfam:PF02384 N6_Mtase > GO:DNA binding ; GO:0003677
Pfam:PF02384 N6_Mtase > GO:N-methyltransferase activity ; GO:0008170
Pfam:PF02384 N6_Mtase > GO:DNA methylation ; GO:0006306
Pfam:PF02386 TrkH > GO:cation transmembrane transporter activity ; GO:0008324
Pfam:PF02386 TrkH > GO:cation transport ; GO:0006812
Pfam:PF02386 TrkH > GO:transmembrane transport ; GO:0055085
Pfam:PF02387 IncFII_repA > GO:plasmid maintenance ; GO:0006276
Pfam:PF02388 FemAB > GO:transferase activity, transferring amino-acyl groups ; GO:0016755
Pfam:PF02388 FemAB > GO:peptidoglycan biosynthetic process ; GO:0009252
Pfam:PF02389 Cornifin > GO:peptide cross-linking ; GO:0018149
Pfam:PF02389 Cornifin > GO:cytoplasm ; GO:0005737
Pfam:PF02390 Methyltransf_4 > GO:tRNA (guanine-N7-)-methyltransferase activity ; GO:0008176
Pfam:PF02390 Methyltransf_4 > GO:tRNA modification ; GO:0006400
Pfam:PF02391 MoaE > GO:Mo-molybdopterin cofactor biosynthetic process ; GO:0006777
Pfam:PF02392 Ycf4 > GO:photosynthesis ; GO:0015979
Pfam:PF02392 Ycf4 > GO:photosystem I ; GO:0009522
Pfam:PF02392 Ycf4 > GO:thylakoid ; GO:0009579
Pfam:PF02392 Ycf4 > GO:integral component of membrane ; GO:0016021
Pfam:PF02394 IL1_propep > GO:interleukin-1 receptor binding ; GO:0005149
Pfam:PF02394 IL1_propep > GO:inflammatory response ; GO:0006954
Pfam:PF02394 IL1_propep > GO:immune response ; GO:0006955
Pfam:PF02395 Peptidase_S6 > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF02395 Peptidase_S6 > GO:proteolysis ; GO:0006508
Pfam:PF02399 Herpes_ori_bp > GO:DNA replication origin binding ; GO:0003688
Pfam:PF02399 Herpes_ori_bp > GO:ATP binding ; GO:0005524
Pfam:PF02399 Herpes_ori_bp > GO:DNA replication ; GO:0006260
Pfam:PF02401 LYTB > GO:metal ion binding ; GO:0046872
Pfam:PF02401 LYTB > GO:4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity ; GO:0051745
Pfam:PF02401 LYTB > GO:isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway ; GO:0019288
Pfam:PF02401 LYTB > GO:dimethylallyl diphosphate biosynthetic process ; GO:0050992
Pfam:PF02402 Lysis_col > GO:pathogenesis ; GO:0009405
Pfam:PF02402 Lysis_col > GO:cytolysis ; GO:0019835
Pfam:PF02402 Lysis_col > GO:outer membrane ; GO:0019867
Pfam:PF02404 SCF > GO:stem cell factor receptor binding ; GO:0005173
Pfam:PF02404 SCF > GO:cell adhesion ; GO:0007155
Pfam:PF02404 SCF > GO:membrane ; GO:0016020
Pfam:PF02406 MmoB_DmpM > GO:monooxygenase activity ; GO:0004497
Pfam:PF02406 MmoB_DmpM > GO:cellular aromatic compound metabolic process ; GO:0006725
Pfam:PF02407 Viral_Rep > GO:nucleotidyltransferase activity ; GO:0016779
Pfam:PF02407 Viral_Rep > GO:endodeoxyribonuclease activity, producing 5'-phosphomonoesters ; GO:0016888
Pfam:PF02407 Viral_Rep > GO:ATPase activity, uncoupled ; GO:0042624
Pfam:PF02407 Viral_Rep > GO:DNA replication ; GO:0006260
Pfam:PF02407 Viral_Rep > GO:protein-DNA covalent cross-linking ; GO:0018142
Pfam:PF02411 MerT > GO:mercury ion transmembrane transporter activity ; GO:0015097
Pfam:PF02411 MerT > GO:mercury ion transport ; GO:0015694
Pfam:PF02411 MerT > GO:membrane ; GO:0016020
Pfam:PF02412 TSP_3 > GO:calcium ion binding ; GO:0005509
Pfam:PF02412 TSP_3 > GO:cell adhesion ; GO:0007155
Pfam:PF02416 MttA_Hcf106 > GO:protein transporter activity ; GO:0008565
Pfam:PF02416 MttA_Hcf106 > GO:protein transport ; GO:0015031
Pfam:PF02417 Chromate_transp > GO:chromate transmembrane transporter activity ; GO:0015109
Pfam:PF02417 Chromate_transp > GO:chromate transport ; GO:0015703
Pfam:PF02419 PsbL > GO:photosynthesis ; GO:0015979
Pfam:PF02419 PsbL > GO:photosystem II ; GO:0009523
Pfam:PF02419 PsbL > GO:photosystem II reaction center ; GO:0009539
Pfam:PF02419 PsbL > GO:membrane ; GO:0016020
Pfam:PF02421 FeoB_N > GO:GTP binding ; GO:0005525
Pfam:PF02421 FeoB_N > GO:ferrous iron transmembrane transporter activity ; GO:0015093
Pfam:PF02421 FeoB_N > GO:ferrous iron transport ; GO:0015684
Pfam:PF02421 FeoB_N > GO:integral component of membrane ; GO:0016021
Pfam:PF02422 Keratin > GO:structural constituent of cytoskeleton ; GO:0005200
Pfam:PF02422 Keratin > GO:intermediate filament ; GO:0005882
Pfam:PF02427 PSI_PsaE > GO:photosynthesis ; GO:0015979
Pfam:PF02427 PSI_PsaE > GO:photosystem I ; GO:0009522
Pfam:PF02427 PSI_PsaE > GO:photosystem I reaction center ; GO:0009538
Pfam:PF02428 Prot_inhib_II > GO:serine-type endopeptidase inhibitor activity ; GO:0004867
Pfam:PF02429 PCP > GO:protein-chromophore linkage ; GO:0018298
Pfam:PF02429 PCP > GO:light-harvesting complex ; GO:0030076
Pfam:PF02430 AMA-1 > GO:pathogenesis ; GO:0009405
Pfam:PF02430 AMA-1 > GO:membrane ; GO:0016020
Pfam:PF02431 Chalcone > GO:intramolecular lyase activity ; GO:0016872
Pfam:PF02432 Fimbrial_K88 > GO:cell adhesion ; GO:0007155
Pfam:PF02432 Fimbrial_K88 > GO:pilus ; GO:0009289
Pfam:PF02434 Fringe > GO:transferase activity, transferring glycosyl groups ; GO:0016757
Pfam:PF02434 Fringe > GO:membrane ; GO:0016020
Pfam:PF02435 Glyco_hydro_68 > GO:levansucrase activity ; GO:0050053
Pfam:PF02435 Glyco_hydro_68 > GO:carbohydrate utilization ; GO:0009758
Pfam:PF02437 Ski_Sno > GO:nucleus ; GO:0005634
Pfam:PF02438 Adeno_100 > GO:intracellular transport of viral protein in host cell ; GO:0019060
Pfam:PF02441 Flavoprotein > GO:catalytic activity ; GO:0003824
Pfam:PF02443 Circo_capsid > GO:viral capsid assembly ; GO:0019069
Pfam:PF02443 Circo_capsid > GO:host cell nucleus ; GO:0042025
Pfam:PF02444 HEV_ORF1 > GO:host cell cytoplasm ; GO:0030430
Pfam:PF02445 NadA > GO:quinolinate synthetase A activity ; GO:0008987
Pfam:PF02445 NadA > GO:4 iron, 4 sulfur cluster binding ; GO:0051539
Pfam:PF02445 NadA > GO:NAD biosynthetic process ; GO:0009435
Pfam:PF02446 Glyco_hydro_77 > GO:4-alpha-glucanotransferase activity ; GO:0004134
Pfam:PF02446 Glyco_hydro_77 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02447 GntP_permease > GO:gluconate transmembrane transporter activity ; GO:0015128
Pfam:PF02447 GntP_permease > GO:gluconate transmembrane transport ; GO:0035429
Pfam:PF02447 GntP_permease > GO:membrane ; GO:0016020
Pfam:PF02449 Glyco_hydro_42 > GO:beta-galactosidase activity ; GO:0004565
Pfam:PF02449 Glyco_hydro_42 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02449 Glyco_hydro_42 > GO:beta-galactosidase complex ; GO:0009341
Pfam:PF02450 LCAT > GO:O-acyltransferase activity ; GO:0008374
Pfam:PF02450 LCAT > GO:lipid metabolic process ; GO:0006629
Pfam:PF02452 PemK > GO:DNA binding ; GO:0003677
Pfam:PF02454 Sigma_1s > GO:modulation by virus of host morphology or physiology ; GO:0019048
Pfam:PF02456 Adeno_IVa2 > GO:viral transcription ; GO:0019083
Pfam:PF02458 Transferase > GO:transferase activity, transferring acyl groups other than amino-acyl groups ; GO:0016747
Pfam:PF02459 Adeno_terminal > GO:DNA binding ; GO:0003677
Pfam:PF02459 Adeno_terminal > GO:DNA replication ; GO:0006260
Pfam:PF02460 Patched > GO:hedgehog receptor activity ; GO:0008158
Pfam:PF02460 Patched > GO:membrane ; GO:0016020
Pfam:PF02462 Opacity > GO:porin activity ; GO:0015288
Pfam:PF02462 Opacity > GO:membrane ; GO:0016020
Pfam:PF02465 FliD_N > GO:bacterial-type flagellum hook ; GO:0009424
Pfam:PF02468 PsbN > GO:photosynthesis ; GO:0015979
Pfam:PF02468 PsbN > GO:photosystem II ; GO:0009523
Pfam:PF02468 PsbN > GO:photosystem II reaction center ; GO:0009539
Pfam:PF02468 PsbN > GO:membrane ; GO:0016020
Pfam:PF02472 ExbD > GO:transporter activity ; GO:0005215
Pfam:PF02472 ExbD > GO:transport ; GO:0006810
Pfam:PF02472 ExbD > GO:membrane ; GO:0016020
Pfam:PF02474 NodA > GO:transferase activity, transferring acyl groups ; GO:0016746
Pfam:PF02474 NodA > GO:nodulation ; GO:0009877
Pfam:PF02474 NodA > GO:cytosol ; GO:0005829
Pfam:PF02475 Met_10 > GO:transferase activity ; GO:0016740
Pfam:PF02477 Nairo_nucleo > GO:viral nucleocapsid ; GO:0019013
Pfam:PF02478 Pneumo_phosprot > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF02480 Herpes_gE > GO:membrane ; GO:0016020
Pfam:PF02481 DNA_processg_A > GO:DNA mediated transformation ; GO:0009294
Pfam:PF02482 Ribosomal_S30AE > GO:primary metabolic process ; GO:0044238
Pfam:PF02485 Branch > GO:acetylglucosaminyltransferase activity ; GO:0008375
Pfam:PF02485 Branch > GO:membrane ; GO:0016020
Pfam:PF02486 Rep_trans > GO:DNA binding ; GO:0003677
Pfam:PF02486 Rep_trans > GO:DNA topoisomerase activity ; GO:0003916
Pfam:PF02486 Rep_trans > GO:DNA replication initiation ; GO:0006270
Pfam:PF02487 CLN3 > GO:membrane ; GO:0016020
Pfam:PF02491 SHS2_FTSA > GO:protein binding ; GO:0005515
Pfam:PF02491 SHS2_FTSA > GO:cell cycle ; GO:0007049
Pfam:PF02496 ABA_WDS > GO:response to stress ; GO:0006950
Pfam:PF02499 DNA_pack_C > GO:DNA packaging ; GO:0006323
Pfam:PF02500 DNA_pack_N > GO:DNA packaging ; GO:0006323
Pfam:PF02501 T2SI > GO:protein transporter activity ; GO:0008565
Pfam:PF02501 T2SI > GO:protein secretion by the type II secretion system ; GO:0015628
Pfam:PF02501 T2SI > GO:type II protein secretion system complex ; GO:0015627
Pfam:PF02502 LacAB_rpiB > GO:isomerase activity ; GO:0016853
Pfam:PF02502 LacAB_rpiB > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02504 FA_synthesis > GO:catalytic activity ; GO:0003824
Pfam:PF02504 FA_synthesis > GO:transferase activity, transferring acyl groups other than amino-acyl groups ; GO:0016747
Pfam:PF02504 FA_synthesis > GO:fatty acid biosynthetic process ; GO:0006633
Pfam:PF02505 MCR_D > GO:methanogenesis ; GO:0015948
Pfam:PF02507 PSI_PsaF > GO:photosynthesis ; GO:0015979
Pfam:PF02507 PSI_PsaF > GO:photosystem I ; GO:0009522
Pfam:PF02507 PSI_PsaF > GO:photosystem I reaction center ; GO:0009538
Pfam:PF02508 Rnf-Nqr > GO:membrane ; GO:0016020
Pfam:PF02509 Rota_NS35 > GO:RNA binding ; GO:0003723
Pfam:PF02509 Rota_NS35 > GO:viral genome replication ; GO:0019079
Pfam:PF02511 Thy1 > GO:flavin adenine dinucleotide binding ; GO:0050660
Pfam:PF02511 Thy1 > GO:thymidylate synthase (FAD) activity ; GO:0050797
Pfam:PF02511 Thy1 > GO:dTMP biosynthetic process ; GO:0006231
Pfam:PF02513 Spin-Ssty > GO:gamete generation ; GO:0007276
Pfam:PF02514 CobN-Mg_chel > GO:biosynthetic process ; GO:0009058
Pfam:PF02515 CoA_transf_3 > GO:catalytic activity ; GO:0003824
Pfam:PF02516 STT3 > GO:oligosaccharyl transferase activity ; GO:0004576
Pfam:PF02516 STT3 > GO:protein glycosylation ; GO:0006486
Pfam:PF02516 STT3 > GO:membrane ; GO:0016020
Pfam:PF02517 Abi > GO:membrane ; GO:0016020
Pfam:PF02522 Antibiotic_NAT > GO:aminoglycoside 3-N-acetyltransferase activity ; GO:0046353
Pfam:PF02522 Antibiotic_NAT > GO:response to antibiotic ; GO:0046677
Pfam:PF02527 GidB > GO:rRNA methyltransferase activity ; GO:0008649
Pfam:PF02527 GidB > GO:rRNA processing ; GO:0006364
Pfam:PF02527 GidB > GO:cytoplasm ; GO:0005737
Pfam:PF02529 PetG > GO:cytochrome b6f complex ; GO:0009512
Pfam:PF02530 Porin_2 > GO:porin activity ; GO:0015288
Pfam:PF02530 Porin_2 > GO:transport ; GO:0006810
Pfam:PF02530 Porin_2 > GO:membrane ; GO:0016020
Pfam:PF02531 PsaD > GO:photosynthesis ; GO:0015979
Pfam:PF02531 PsaD > GO:photosystem I ; GO:0009522
Pfam:PF02531 PsaD > GO:photosystem I reaction center ; GO:0009538
Pfam:PF02532 PsbI > GO:photosynthesis ; GO:0015979
Pfam:PF02532 PsbI > GO:photosystem II ; GO:0009523
Pfam:PF02532 PsbI > GO:photosystem II reaction center ; GO:0009539
Pfam:PF02532 PsbI > GO:membrane ; GO:0016020
Pfam:PF02533 PsbK > GO:photosynthesis ; GO:0015979
Pfam:PF02533 PsbK > GO:photosystem II ; GO:0009523
Pfam:PF02533 PsbK > GO:photosystem II reaction center ; GO:0009539
Pfam:PF02534 T4SS-DNA_transf > GO:unidirectional conjugation ; GO:0009291
Pfam:PF02534 T4SS-DNA_transf > GO:membrane ; GO:0016020
Pfam:PF02535 Zip > GO:metal ion transmembrane transporter activity ; GO:0046873
Pfam:PF02535 Zip > GO:metal ion transport ; GO:0030001
Pfam:PF02535 Zip > GO:transmembrane transport ; GO:0055085
Pfam:PF02535 Zip > GO:membrane ; GO:0016020
Pfam:PF02537 CRCB > GO:integral component of membrane ; GO:0016021
Pfam:PF02538 Hydantoinase_B > GO:catalytic activity ; GO:0003824
Pfam:PF02542 YgbB > GO:2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity ; GO:0008685
Pfam:PF02542 YgbB > GO:terpenoid biosynthetic process ; GO:0016114
Pfam:PF02543 CmcH_NodU > GO:catalytic activity ; GO:0003824
Pfam:PF02543 CmcH_NodU > GO:biosynthetic process ; GO:0009058
Pfam:PF02544 Steroid_dh > GO:oxidoreductase activity, acting on the CH-CH group of donors ; GO:0016627
Pfam:PF02544 Steroid_dh > GO:lipid metabolic process ; GO:0006629
Pfam:PF02544 Steroid_dh > GO:cytoplasm ; GO:0005737
Pfam:PF02544 Steroid_dh > GO:integral component of membrane ; GO:0016021
Pfam:PF02545 Maf > GO:cytoplasm ; GO:0005737
Pfam:PF02547 Queuosine_synth > GO:transferase activity ; GO:0016740
Pfam:PF02547 Queuosine_synth > GO:isomerase activity ; GO:0016853
Pfam:PF02547 Queuosine_synth > GO:queuosine biosynthetic process ; GO:0008616
Pfam:PF02548 Pantoate_transf > GO:3-methyl-2-oxobutanoate hydroxymethyltransferase activity ; GO:0003864
Pfam:PF02548 Pantoate_transf > GO:pantothenate biosynthetic process ; GO:0015940
Pfam:PF02550 AcetylCoA_hydro > GO:catalytic activity ; GO:0003824
Pfam:PF02550 AcetylCoA_hydro > GO:acetyl-CoA metabolic process ; GO:0006084
Pfam:PF02552 CO_dh > GO:methanogenesis, from acetate ; GO:0019385
Pfam:PF02553 CbiN > GO:cobalt ion transmembrane transporter activity ; GO:0015087
Pfam:PF02553 CbiN > GO:cobalt ion transport ; GO:0006824
Pfam:PF02553 CbiN > GO:cobalamin biosynthetic process ; GO:0009236
Pfam:PF02553 CbiN > GO:membrane ; GO:0016020
Pfam:PF02554 CstA > GO:cellular response to starvation ; GO:0009267
Pfam:PF02554 CstA > GO:membrane ; GO:0016020
Pfam:PF02556 SecB > GO:unfolded protein binding ; GO:0051082
Pfam:PF02556 SecB > GO:protein transport ; GO:0015031
Pfam:PF02556 SecB > GO:protein tetramerization ; GO:0051262
Pfam:PF02557 VanY > GO:peptidase activity ; GO:0008233
Pfam:PF02557 VanY > GO:proteolysis ; GO:0006508
Pfam:PF02558 ApbA > GO:2-dehydropantoate 2-reductase activity ; GO:0008677
Pfam:PF02558 ApbA > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02560 Cyanate_lyase > GO:cyanate metabolic process ; GO:0009439
Pfam:PF02561 FliS > GO:bacterial-type flagellum ; GO:0009288
Pfam:PF02562 PhoH > GO:ATP binding ; GO:0005524
Pfam:PF02563 Poly_export > GO:polysaccharide transmembrane transporter activity ; GO:0015159
Pfam:PF02563 Poly_export > GO:polysaccharide transport ; GO:0015774
Pfam:PF02563 Poly_export > GO:membrane ; GO:0016020
Pfam:PF02565 RecO_C > GO:DNA repair ; GO:0006281
Pfam:PF02565 RecO_C > GO:DNA recombination ; GO:0006310
Pfam:PF02566 OsmC > GO:response to oxidative stress ; GO:0006979
Pfam:PF02567 PhzC-PhzF > GO:catalytic activity ; GO:0003824
Pfam:PF02567 PhzC-PhzF > GO:biosynthetic process ; GO:0009058
Pfam:PF02568 ThiI > GO:tRNA adenylyltransferase activity ; GO:0004810
Pfam:PF02569 Pantoate_ligase > GO:pantoate-beta-alanine ligase activity ; GO:0004592
Pfam:PF02569 Pantoate_ligase > GO:pantothenate biosynthetic process ; GO:0015940
Pfam:PF02570 CbiC > GO:precorrin-8X methylmutase activity ; GO:0016993
Pfam:PF02570 CbiC > GO:cobalamin biosynthetic process ; GO:0009236
Pfam:PF02571 CbiJ > GO:precorrin-6A reductase activity ; GO:0016994
Pfam:PF02571 CbiJ > GO:cobalamin biosynthetic process ; GO:0009236
Pfam:PF02571 CbiJ > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02572 CobA_CobO_BtuR > GO:ATP binding ; GO:0005524
Pfam:PF02572 CobA_CobO_BtuR > GO:cob(I)yrinic acid a,c-diamide adenosyltransferase activity ; GO:0008817
Pfam:PF02572 CobA_CobO_BtuR > GO:cobalamin biosynthetic process ; GO:0009236
Pfam:PF02574 S-methyl_trans > GO:S-adenosylmethionine-homocysteine S-methyltransferase activity ; GO:0008898
Pfam:PF02577 DNase-RNase > GO:nuclease activity ; GO:0004518
Pfam:PF02580 Tyr_Deacylase > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF02580 Tyr_Deacylase > GO:D-amino acid catabolic process ; GO:0019478
Pfam:PF02580 Tyr_Deacylase > GO:cytoplasm ; GO:0005737
Pfam:PF02581 TMP-TENI > GO:thiamine-phosphate diphosphorylase activity ; GO:0004789
Pfam:PF02581 TMP-TENI > GO:thiamine biosynthetic process ; GO:0009228
Pfam:PF02590 SPOUT_MTase > GO:methyltransferase activity ; GO:0008168
Pfam:PF02590 SPOUT_MTase > GO:rRNA processing ; GO:0006364
Pfam:PF02590 SPOUT_MTase > GO:cytoplasm ; GO:0005737
Pfam:PF02595 Gly_kinase > GO:glycerate kinase activity ; GO:0008887
Pfam:PF02595 Gly_kinase > GO:organic acid phosphorylation ; GO:0031388
Pfam:PF02599 CsrA > GO:RNA binding ; GO:0003723
Pfam:PF02599 CsrA > GO:regulation of carbohydrate metabolic process ; GO:0006109
Pfam:PF02599 CsrA > GO:mRNA catabolic process ; GO:0006402
Pfam:PF02600 DsbB > GO:protein disulfide oxidoreductase activity ; GO:0015035
Pfam:PF02600 DsbB > GO:membrane ; GO:0016020
Pfam:PF02601 Exonuc_VII_L > GO:exodeoxyribonuclease VII activity ; GO:0008855
Pfam:PF02602 HEM4 > GO:uroporphyrinogen-III synthase activity ; GO:0004852
Pfam:PF02602 HEM4 > GO:tetrapyrrole biosynthetic process ; GO:0033014
Pfam:PF02603 Hpr_kinase_N > GO:phosphorelay sensor kinase activity ; GO:0000155
Pfam:PF02603 Hpr_kinase_N > GO:protein kinase activity ; GO:0004672
Pfam:PF02603 Hpr_kinase_N > GO:ATP binding ; GO:0005524
Pfam:PF02603 Hpr_kinase_N > GO:phosphorelay signal transduction system ; GO:0000160
Pfam:PF02603 Hpr_kinase_N > GO:regulation of carbohydrate metabolic process ; GO:0006109
Pfam:PF02605 PsaL > GO:photosynthesis ; GO:0015979
Pfam:PF02605 PsaL > GO:photosystem I ; GO:0009522
Pfam:PF02605 PsaL > GO:photosystem I reaction center ; GO:0009538
Pfam:PF02606 LpxK > GO:ATP binding ; GO:0005524
Pfam:PF02606 LpxK > GO:tetraacyldisaccharide 4'-kinase activity ; GO:0009029
Pfam:PF02606 LpxK > GO:lipid A biosynthetic process ; GO:0009245
Pfam:PF02607 B12-binding_2 > GO:methionine synthase activity ; GO:0008705
Pfam:PF02607 B12-binding_2 > GO:cobalamin binding ; GO:0031419
Pfam:PF02607 B12-binding_2 > GO:metal ion binding ; GO:0046872
Pfam:PF02607 B12-binding_2 > GO:methionine biosynthetic process ; GO:0009086
Pfam:PF02608 Bmp > GO:plasma membrane ; GO:0005886
Pfam:PF02609 Exonuc_VII_S > GO:exodeoxyribonuclease VII activity ; GO:0008855
Pfam:PF02609 Exonuc_VII_S > GO:DNA catabolic process ; GO:0006308
Pfam:PF02609 Exonuc_VII_S > GO:exodeoxyribonuclease VII complex ; GO:0009318
Pfam:PF02610 Arabinose_Isome > GO:L-arabinose isomerase activity ; GO:0008733
Pfam:PF02610 Arabinose_Isome > GO:metabolic process ; GO:0008152
Pfam:PF02611 CDH > GO:CDP-diacylglycerol diphosphatase activity ; GO:0008715
Pfam:PF02611 CDH > GO:phospholipid biosynthetic process ; GO:0008654
Pfam:PF02611 CDH > GO:membrane ; GO:0016020
Pfam:PF02614 UxaC > GO:glucuronate isomerase activity ; GO:0008880
Pfam:PF02614 UxaC > GO:glucuronate catabolic process ; GO:0006064
Pfam:PF02615 Ldh_2 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF02615 Ldh_2 > GO:metabolic process ; GO:0008152
Pfam:PF02615 Ldh_2 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02617 ClpS > GO:protein catabolic process ; GO:0030163
Pfam:PF02623 FliW > GO:bacterial-type flagellum assembly ; GO:0044780
Pfam:PF02627 CMD > GO:peroxiredoxin activity ; GO:0051920
Pfam:PF02627 CMD > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02628 COX15-CtaA > GO:oxidoreductase activity, acting on the CH-CH group of donors ; GO:0016627
Pfam:PF02628 COX15-CtaA > GO:heme a biosynthetic process ; GO:0006784
Pfam:PF02628 COX15-CtaA > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02628 COX15-CtaA > GO:integral component of membrane ; GO:0016021
Pfam:PF02629 CoA_binding > GO:cofactor binding ; GO:0048037
Pfam:PF02631 RecX > GO:regulation of DNA repair ; GO:0006282
Pfam:PF02632 BioY > GO:biotin transporter activity ; GO:0015225
Pfam:PF02632 BioY > GO:biotin transport ; GO:0015878
Pfam:PF02632 BioY > GO:plasma membrane ; GO:0005886
Pfam:PF02634 FdhD-NarQ > GO:formate dehydrogenase (NAD+) activity ; GO:0008863
Pfam:PF02634 FdhD-NarQ > GO:formate dehydrogenase complex ; GO:0009326
Pfam:PF02637 GatB_Yqey > GO:carbon-nitrogen ligase activity, with glutamine as amido-N-donor ; GO:0016884
Pfam:PF02649 GCHY-1 > GO:GTP cyclohydrolase activity ; GO:0003933
Pfam:PF02652 Lactate_perm > GO:lactate transmembrane transporter activity ; GO:0015129
Pfam:PF02652 Lactate_perm > GO:lactate transport ; GO:0015727
Pfam:PF02652 Lactate_perm > GO:integral component of plasma membrane ; GO:0005887
Pfam:PF02653 BPD_transp_2 > GO:transporter activity ; GO:0005215
Pfam:PF02653 BPD_transp_2 > GO:transport ; GO:0006810
Pfam:PF02653 BPD_transp_2 > GO:membrane ; GO:0016020
Pfam:PF02654 CobS > GO:cobalamin 5'-phosphate synthase activity ; GO:0008818
Pfam:PF02654 CobS > GO:cobalamin biosynthetic process ; GO:0009236
Pfam:PF02655 ATP-grasp_3 > GO:ATP binding ; GO:0005524
Pfam:PF02655 ATP-grasp_3 > GO:metal ion binding ; GO:0046872
Pfam:PF02660 G3P_acyltransf > GO:acyl-phosphate glycerol-3-phosphate acyltransferase activity ; GO:0043772
Pfam:PF02660 G3P_acyltransf > GO:phospholipid biosynthetic process ; GO:0008654
Pfam:PF02660 G3P_acyltransf > GO:plasma membrane ; GO:0005886
Pfam:PF02662 FlpD > GO:methanogenesis ; GO:0015948
Pfam:PF02662 FlpD > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02664 LuxS > GO:iron ion binding ; GO:0005506
Pfam:PF02664 LuxS > GO:S-ribosylhomocysteine lyase activity ; GO:0043768
Pfam:PF02664 LuxS > GO:quorum sensing ; GO:0009372
Pfam:PF02665 Nitrate_red_gam > GO:nitrate reductase activity ; GO:0008940
Pfam:PF02665 Nitrate_red_gam > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02665 Nitrate_red_gam > GO:nitrate reductase complex ; GO:0009325
Pfam:PF02666 PS_Dcarbxylase > GO:phosphatidylserine decarboxylase activity ; GO:0004609
Pfam:PF02666 PS_Dcarbxylase > GO:phospholipid biosynthetic process ; GO:0008654
Pfam:PF02668 TauD > GO:oxidoreductase activity ; GO:0016491
Pfam:PF02668 TauD > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02669 KdpC > GO:potassium-transporting ATPase activity ; GO:0008556
Pfam:PF02669 KdpC > GO:potassium ion transport ; GO:0006813
Pfam:PF02669 KdpC > GO:integral component of membrane ; GO:0016021
Pfam:PF02670 DXP_reductoisom > GO:NADPH binding ; GO:0070402
Pfam:PF02670 DXP_reductoisom > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02671 PAH > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02671 PAH > GO:nucleus ; GO:0005634
Pfam:PF02673 BacA > GO:undecaprenyl-diphosphatase activity ; GO:0050380
Pfam:PF02673 BacA > GO:dephosphorylation ; GO:0016311
Pfam:PF02673 BacA > GO:membrane ; GO:0016020
Pfam:PF02674 Colicin_V > GO:toxin biosynthetic process ; GO:0009403
Pfam:PF02674 Colicin_V > GO:membrane ; GO:0016020
Pfam:PF02675 AdoMet_dc > GO:adenosylmethionine decarboxylase activity ; GO:0004014
Pfam:PF02675 AdoMet_dc > GO:spermidine biosynthetic process ; GO:0008295
Pfam:PF02679 ComA > GO:coenzyme M biosynthetic process ; GO:0019295
Pfam:PF02683 DsbD > GO:cytochrome complex assembly ; GO:0017004
Pfam:PF02683 DsbD > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02683 DsbD > GO:membrane ; GO:0016020
Pfam:PF02684 LpxB > GO:lipid-A-disaccharide synthase activity ; GO:0008915
Pfam:PF02684 LpxB > GO:lipid A biosynthetic process ; GO:0009245
Pfam:PF02685 Glucokinase > GO:glucokinase activity ; GO:0004340
Pfam:PF02685 Glucokinase > GO:ATP binding ; GO:0005524
Pfam:PF02685 Glucokinase > GO:glycolytic process ; GO:0006096
Pfam:PF02685 Glucokinase > GO:glucose 6-phosphate metabolic process ; GO:0051156
Pfam:PF02686 Glu-tRNAGln > GO:regulation of translational fidelity ; GO:0006450
Pfam:PF02687 FtsX > GO:membrane ; GO:0016020
Pfam:PF02689 Herpes_Helicase > GO:helicase activity ; GO:0004386
Pfam:PF02689 Herpes_Helicase > GO:ATP binding ; GO:0005524
Pfam:PF02690 Na_Pi_cotrans > GO:sodium-dependent phosphate transmembrane transporter activity ; GO:0015321
Pfam:PF02690 Na_Pi_cotrans > GO:sodium-dependent phosphate transport ; GO:0044341
Pfam:PF02690 Na_Pi_cotrans > GO:membrane ; GO:0016020
Pfam:PF02691 VacA > GO:pathogenesis ; GO:0009405
Pfam:PF02691 VacA > GO:extracellular region ; GO:0005576
Pfam:PF02694 UPF0060 > GO:membrane ; GO:0016020
Pfam:PF02701 zf-Dof > GO:DNA binding ; GO:0003677
Pfam:PF02701 zf-Dof > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02702 KdpD > GO:phosphorelay sensor kinase activity ; GO:0000155
Pfam:PF02702 KdpD > GO:protein histidine kinase activity ; GO:0004673
Pfam:PF02702 KdpD > GO:phosphorelay signal transduction system ; GO:0000160
Pfam:PF02702 KdpD > GO:membrane ; GO:0016020
Pfam:PF02703 Adeno_E1A > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02705 K_trans > GO:potassium ion transmembrane transporter activity ; GO:0015079
Pfam:PF02705 K_trans > GO:potassium ion transmembrane transport ; GO:0071805
Pfam:PF02705 K_trans > GO:membrane ; GO:0016020
Pfam:PF02706 Wzz > GO:lipopolysaccharide biosynthetic process ; GO:0009103
Pfam:PF02706 Wzz > GO:membrane ; GO:0016020
Pfam:PF02710 Hema_HEFG > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF02710 Hema_HEFG > GO:host cell surface receptor binding ; GO:0046789
Pfam:PF02710 Hema_HEFG > GO:fusion of virus membrane with host plasma membrane ; GO:0019064
Pfam:PF02710 Hema_HEFG > GO:viral envelope ; GO:0019031
Pfam:PF02714 DUF221 > GO:membrane ; GO:0016020
Pfam:PF02719 Polysacc_synt_2 > GO:biosynthetic process ; GO:0009058
Pfam:PF02723 NS3_envE > GO:membrane ; GO:0016020
Pfam:PF02724 CDC45 > GO:DNA replication initiation ; GO:0006270
Pfam:PF02727 Cu_amine_oxidN2 > GO:copper ion binding ; GO:0005507
Pfam:PF02727 Cu_amine_oxidN2 > GO:primary amine oxidase activity ; GO:0008131
Pfam:PF02727 Cu_amine_oxidN2 > GO:quinone binding ; GO:0048038
Pfam:PF02727 Cu_amine_oxidN2 > GO:amine metabolic process ; GO:0009308
Pfam:PF02727 Cu_amine_oxidN2 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02728 Cu_amine_oxidN3 > GO:copper ion binding ; GO:0005507
Pfam:PF02728 Cu_amine_oxidN3 > GO:primary amine oxidase activity ; GO:0008131
Pfam:PF02728 Cu_amine_oxidN3 > GO:quinone binding ; GO:0048038
Pfam:PF02728 Cu_amine_oxidN3 > GO:amine metabolic process ; GO:0009308
Pfam:PF02728 Cu_amine_oxidN3 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02729 OTCace_N > GO:carboxyl- or carbamoyltransferase activity ; GO:0016743
Pfam:PF02729 OTCace_N > GO:cellular amino acid metabolic process ; GO:0006520
Pfam:PF02730 AFOR_N > GO:oxidoreductase activity ; GO:0016491
Pfam:PF02730 AFOR_N > GO:oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor ; GO:0016625
Pfam:PF02730 AFOR_N > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF02730 AFOR_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02731 SKIP_SNW > GO:mRNA splicing, via spliceosome ; GO:0000398
Pfam:PF02731 SKIP_SNW > GO:spliceosomal complex ; GO:0005681
Pfam:PF02732 ERCC4 > GO:DNA binding ; GO:0003677
Pfam:PF02732 ERCC4 > GO:nuclease activity ; GO:0004518
Pfam:PF02733 Dak1 > GO:glycerone kinase activity ; GO:0004371
Pfam:PF02733 Dak1 > GO:glycerol metabolic process ; GO:0006071
Pfam:PF02734 Dak2 > GO:glycerone kinase activity ; GO:0004371
Pfam:PF02734 Dak2 > GO:glycerol metabolic process ; GO:0006071
Pfam:PF02735 Ku > GO:DNA binding ; GO:0003677
Pfam:PF02735 Ku > GO:double-strand break repair via nonhomologous end joining ; GO:0006303
Pfam:PF02736 Myosin_N > GO:motor activity ; GO:0003774
Pfam:PF02736 Myosin_N > GO:ATP binding ; GO:0005524
Pfam:PF02736 Myosin_N > GO:myosin complex ; GO:0016459
Pfam:PF02737 3HCDH_N > GO:3-hydroxyacyl-CoA dehydrogenase activity ; GO:0003857
Pfam:PF02737 3HCDH_N > GO:oxidoreductase activity ; GO:0016491
Pfam:PF02737 3HCDH_N > GO:fatty acid metabolic process ; GO:0006631
Pfam:PF02737 3HCDH_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02738 Ald_Xan_dh_C2 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF02738 Ald_Xan_dh_C2 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02739 5_3_exonuc_N > GO:DNA binding ; GO:0003677
Pfam:PF02740 Colipase_C > GO:enzyme activator activity ; GO:0008047
Pfam:PF02740 Colipase_C > GO:digestion ; GO:0007586
Pfam:PF02740 Colipase_C > GO:lipid catabolic process ; GO:0016042
Pfam:PF02740 Colipase_C > GO:extracellular region ; GO:0005576
Pfam:PF02741 FTR_C > GO:transferase activity ; GO:0016740
Pfam:PF02741 FTR_C > GO:one-carbon metabolic process ; GO:0006730
Pfam:PF02742 Fe_dep_repr_C > GO:transition metal ion binding ; GO:0046914
Pfam:PF02742 Fe_dep_repr_C > GO:protein dimerization activity ; GO:0046983
Pfam:PF02742 Fe_dep_repr_C > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02744 GalP_UDP_tr_C > GO:UDP-glucose:hexose-1-phosphate uridylyltransferase activity ; GO:0008108
Pfam:PF02744 GalP_UDP_tr_C > GO:galactose metabolic process ; GO:0006012
Pfam:PF02745 MCR_alpha_N > GO:coenzyme-B sulfoethylthiotransferase activity ; GO:0050524
Pfam:PF02745 MCR_alpha_N > GO:methanogenesis ; GO:0015948
Pfam:PF02747 PCNA_C > GO:DNA binding ; GO:0003677
Pfam:PF02747 PCNA_C > GO:regulation of DNA replication ; GO:0006275
Pfam:PF02749 QRPTase_N > GO:transferase activity, transferring pentosyl groups ; GO:0016763
Pfam:PF02751 TFIIA_gamma_C > GO:transcription initiation from RNA polymerase II promoter ; GO:0006367
Pfam:PF02751 TFIIA_gamma_C > GO:transcription factor TFIIA complex ; GO:0005672
Pfam:PF02761 Cbl_N2 > GO:calcium ion binding ; GO:0005509
Pfam:PF02765 POT1 > GO:DNA binding ; GO:0003677
Pfam:PF02765 POT1 > GO:telomere maintenance ; GO:0000723
Pfam:PF02765 POT1 > GO:nuclear chromosome, telomeric region ; GO:0000784
Pfam:PF02767 DNA_pol3_beta_2 > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF02767 DNA_pol3_beta_2 > GO:3'-5' exonuclease activity ; GO:0008408
Pfam:PF02767 DNA_pol3_beta_2 > GO:DNA replication ; GO:0006260
Pfam:PF02767 DNA_pol3_beta_2 > GO:DNA polymerase III complex ; GO:0009360
Pfam:PF02768 DNA_pol3_beta_3 > GO:DNA binding ; GO:0003677
Pfam:PF02768 DNA_pol3_beta_3 > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF02768 DNA_pol3_beta_3 > GO:3'-5' exonuclease activity ; GO:0008408
Pfam:PF02768 DNA_pol3_beta_3 > GO:DNA replication ; GO:0006260
Pfam:PF02768 DNA_pol3_beta_3 > GO:DNA polymerase III complex ; GO:0009360
Pfam:PF02770 Acyl-CoA_dh_M > GO:acyl-CoA dehydrogenase activity ; GO:0003995
Pfam:PF02770 Acyl-CoA_dh_M > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02771 Acyl-CoA_dh_N > GO:oxidoreductase activity, acting on the CH-CH group of donors ; GO:0016627
Pfam:PF02771 Acyl-CoA_dh_N > GO:flavin adenine dinucleotide binding ; GO:0050660
Pfam:PF02771 Acyl-CoA_dh_N > GO:metabolic process ; GO:0008152
Pfam:PF02771 Acyl-CoA_dh_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02772 S-AdoMet_synt_M > GO:methionine adenosyltransferase activity ; GO:0004478
Pfam:PF02772 S-AdoMet_synt_M > GO:S-adenosylmethionine biosynthetic process ; GO:0006556
Pfam:PF02773 S-AdoMet_synt_C > GO:methionine adenosyltransferase activity ; GO:0004478
Pfam:PF02773 S-AdoMet_synt_C > GO:S-adenosylmethionine biosynthetic process ; GO:0006556
Pfam:PF02774 Semialdhyde_dhC > GO:N-acetyl-gamma-glutamyl-phosphate reductase activity ; GO:0003942
Pfam:PF02774 Semialdhyde_dhC > GO:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor ; GO:0016620
Pfam:PF02774 Semialdhyde_dhC > GO:protein dimerization activity ; GO:0046983
Pfam:PF02774 Semialdhyde_dhC > GO:cellular amino acid biosynthetic process ; GO:0008652
Pfam:PF02774 Semialdhyde_dhC > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02774 Semialdhyde_dhC > GO:cytoplasm ; GO:0005737
Pfam:PF02775 TPP_enzyme_C > GO:catalytic activity ; GO:0003824
Pfam:PF02775 TPP_enzyme_C > GO:thiamine pyrophosphate binding ; GO:0030976
Pfam:PF02776 TPP_enzyme_N > GO:thiamine pyrophosphate binding ; GO:0030976
Pfam:PF02777 Sod_Fe_C > GO:superoxide dismutase activity ; GO:0004784
Pfam:PF02777 Sod_Fe_C > GO:metal ion binding ; GO:0046872
Pfam:PF02777 Sod_Fe_C > GO:superoxide metabolic process ; GO:0006801
Pfam:PF02777 Sod_Fe_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02778 tRNA_int_endo_N > GO:tRNA-intron endonuclease activity ; GO:0000213
Pfam:PF02778 tRNA_int_endo_N > GO:tRNA splicing, via endonucleolytic cleavage and ligation ; GO:0006388
Pfam:PF02780 Transketolase_C > GO:catalytic activity ; GO:0003824
Pfam:PF02780 Transketolase_C > GO:metabolic process ; GO:0008152
Pfam:PF02781 G6PD_C > GO:glucose-6-phosphate dehydrogenase activity ; GO:0004345
Pfam:PF02781 G6PD_C > GO:NADP binding ; GO:0050661
Pfam:PF02781 G6PD_C > GO:glucose metabolic process ; GO:0006006
Pfam:PF02781 G6PD_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02782 FGGY_C > GO:phosphotransferase activity, alcohol group as acceptor ; GO:0016773
Pfam:PF02782 FGGY_C > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02783 MCR_beta_N > GO:coenzyme-B sulfoethylthiotransferase activity ; GO:0050524
Pfam:PF02784 Orn_Arg_deC_N > GO:catalytic activity ; GO:0003824
Pfam:PF02785 Biotin_carb_C > GO:ligase activity ; GO:0016874
Pfam:PF02786 CPSase_L_D2 > GO:ATP binding ; GO:0005524
Pfam:PF02788 RuBisCO_large_N > GO:magnesium ion binding ; GO:0000287
Pfam:PF02788 RuBisCO_large_N > GO:ribulose-bisphosphate carboxylase activity ; GO:0016984
Pfam:PF02788 RuBisCO_large_N > GO:carbon fixation ; GO:0015977
Pfam:PF02789 Peptidase_M17_N > GO:aminopeptidase activity ; GO:0004177
Pfam:PF02789 Peptidase_M17_N > GO:proteolysis ; GO:0006508
Pfam:PF02789 Peptidase_M17_N > GO:intracellular ; GO:0005622
Pfam:PF02790 COX2_TM > GO:electron transport chain ; GO:0022900
Pfam:PF02790 COX2_TM > GO:integral component of membrane ; GO:0016021
Pfam:PF02792 Mago_nashi > GO:nucleus ; GO:0005634
Pfam:PF02793 HRM > GO:G-protein coupled receptor activity ; GO:0004930
Pfam:PF02793 HRM > GO:membrane ; GO:0016020
Pfam:PF02794 HlyC > GO:transferase activity, transferring acyl groups ; GO:0016746
Pfam:PF02794 HlyC > GO:toxin metabolic process ; GO:0009404
Pfam:PF02794 HlyC > GO:cytoplasm ; GO:0005737
Pfam:PF02796 HTH_7 > GO:recombinase activity ; GO:0000150
Pfam:PF02796 HTH_7 > GO:DNA binding ; GO:0003677
Pfam:PF02796 HTH_7 > GO:DNA recombination ; GO:0006310
Pfam:PF02797 Chal_sti_synt_C > GO:transferase activity, transferring acyl groups ; GO:0016746
Pfam:PF02798 GST_N > GO:protein binding ; GO:0005515
Pfam:PF02799 NMT_C > GO:glycylpeptide N-tetradecanoyltransferase activity ; GO:0004379
Pfam:PF02800 Gp_dh_C > GO:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor ; GO:0016620
Pfam:PF02800 Gp_dh_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02803 Thiolase_C > GO:transferase activity, transferring acyl groups other than amino-acyl groups ; GO:0016747
Pfam:PF02803 Thiolase_C > GO:metabolic process ; GO:0008152
Pfam:PF02805 Ada_Zn_binding > GO:DNA binding ; GO:0003677
Pfam:PF02805 Ada_Zn_binding > GO:methyltransferase activity ; GO:0008168
Pfam:PF02805 Ada_Zn_binding > GO:zinc ion binding ; GO:0008270
Pfam:PF02805 Ada_Zn_binding > GO:DNA repair ; GO:0006281
Pfam:PF02805 Ada_Zn_binding > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02806 Alpha-amylase_C > GO:catalytic activity ; GO:0003824
Pfam:PF02806 Alpha-amylase_C > GO:cation binding ; GO:0043169
Pfam:PF02806 Alpha-amylase_C > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02807 ATP-gua_PtransN > GO:kinase activity ; GO:0016301
Pfam:PF02807 ATP-gua_PtransN > GO:transferase activity, transferring phosphorus-containing groups ; GO:0016772
Pfam:PF02811 PHP > GO:catalytic activity ; GO:0003824
Pfam:PF02812 ELFV_dehydrog_N > GO:oxidoreductase activity ; GO:0016491
Pfam:PF02812 ELFV_dehydrog_N > GO:cellular amino acid metabolic process ; GO:0006520
Pfam:PF02812 ELFV_dehydrog_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02815 MIR > GO:membrane ; GO:0016020
Pfam:PF02816 Alpha_kinase > GO:protein serine/threonine kinase activity ; GO:0004674
Pfam:PF02816 Alpha_kinase > GO:ATP binding ; GO:0005524
Pfam:PF02816 Alpha_kinase > GO:protein phosphorylation ; GO:0006468
Pfam:PF02817 E3_binding > GO:transferase activity, transferring acyl groups ; GO:0016746
Pfam:PF02817 E3_binding > GO:metabolic process ; GO:0008152
Pfam:PF02819 Toxin_9 > GO:ion channel inhibitor activity ; GO:0008200
Pfam:PF02819 Toxin_9 > GO:pathogenesis ; GO:0009405
Pfam:PF02819 Toxin_9 > GO:extracellular region ; GO:0005576
Pfam:PF02820 MBT > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02820 MBT > GO:nucleus ; GO:0005634
Pfam:PF02821 Staphylokinase > GO:pathogenesis ; GO:0009405
Pfam:PF02821 Staphylokinase > GO:plasminogen activation ; GO:0031639
Pfam:PF02821 Staphylokinase > GO:extracellular region ; GO:0005576
Pfam:PF02822 Antistasin > GO:serine-type endopeptidase inhibitor activity ; GO:0004867
Pfam:PF02823 ATP-synt_DE_N > GO:proton-transporting ATP synthase activity, rotational mechanism ; GO:0046933
Pfam:PF02823 ATP-synt_DE_N > GO:proton-transporting ATPase activity, rotational mechanism ; GO:0046961
Pfam:PF02823 ATP-synt_DE_N > GO:ATP synthesis coupled proton transport ; GO:0015986
Pfam:PF02823 ATP-synt_DE_N > GO:proton-transporting ATP synthase complex, catalytic core F(1) ; GO:0045261
Pfam:PF02826 2-Hacid_dh_C > GO:NAD binding ; GO:0051287
Pfam:PF02826 2-Hacid_dh_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02827 PKI > GO:cAMP-dependent protein kinase inhibitor activity ; GO:0004862
Pfam:PF02827 PKI > GO:negative regulation of protein kinase activity ; GO:0006469
Pfam:PF02829 3H > GO:small molecule binding ; GO:0036094
Pfam:PF02831 gpW > GO:viral life cycle ; GO:0019058
Pfam:PF02833 DHHA2 > GO:pyrophosphatase activity ; GO:0016462
Pfam:PF02833 DHHA2 > GO:cytoplasm ; GO:0005737
Pfam:PF02836 Glyco_hydro_2_C > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF02836 Glyco_hydro_2_C > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02837 Glyco_hydro_2_N > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF02837 Glyco_hydro_2_N > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02839 CBM_5_12 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF02839 CBM_5_12 > GO:carbohydrate binding ; GO:0030246
Pfam:PF02839 CBM_5_12 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02839 CBM_5_12 > GO:extracellular region ; GO:0005576
Pfam:PF02840 Prp18 > GO:RNA splicing ; GO:0008380
Pfam:PF02840 Prp18 > GO:spliceosomal complex ; GO:0005681
Pfam:PF02841 GBP_C > GO:GTPase activity ; GO:0003924
Pfam:PF02841 GBP_C > GO:GTP binding ; GO:0005525
Pfam:PF02843 GARS_C > GO:phosphoribosylamine-glycine ligase activity ; GO:0004637
Pfam:PF02843 GARS_C > GO:purine nucleobase biosynthetic process ; GO:0009113
Pfam:PF02844 GARS_N > GO:phosphoribosylamine-glycine ligase activity ; GO:0004637
Pfam:PF02844 GARS_N > GO:purine nucleobase biosynthetic process ; GO:0009113
Pfam:PF02845 CUE > GO:protein binding ; GO:0005515
Pfam:PF02852 Pyr_redox_dim > GO:cell redox homeostasis ; GO:0045454
Pfam:PF02852 Pyr_redox_dim > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02854 MIF4G > GO:RNA binding ; GO:0003723
Pfam:PF02854 MIF4G > GO:protein binding ; GO:0005515
Pfam:PF02861 Clp_N > GO:protein metabolic process ; GO:0019538
Pfam:PF02862 DDHD > GO:metal ion binding ; GO:0046872
Pfam:PF02863 Arg_repressor_C > GO:arginine binding ; GO:0034618
Pfam:PF02863 Arg_repressor_C > GO:protein oligomerization ; GO:0051259
Pfam:PF02864 STAT_bind > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF02864 STAT_bind > GO:signal transducer activity ; GO:0004871
Pfam:PF02864 STAT_bind > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02864 STAT_bind > GO:signal transduction ; GO:0007165
Pfam:PF02864 STAT_bind > GO:nucleus ; GO:0005634
Pfam:PF02865 STAT_int > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF02865 STAT_int > GO:signal transducer activity ; GO:0004871
Pfam:PF02865 STAT_int > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF02865 STAT_int > GO:signal transduction ; GO:0007165
Pfam:PF02866 Ldh_1_C > GO:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ; GO:0016616
Pfam:PF02866 Ldh_1_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02867 Ribonuc_red_lgC > GO:DNA replication ; GO:0006260
Pfam:PF02867 Ribonuc_red_lgC > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02868 Peptidase_M4_C > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF02870 Methyltransf_1N > GO:methylated-DNA-[protein]-cysteine S-methyltransferase activity ; GO:0003908
Pfam:PF02870 Methyltransf_1N > GO:DNA repair ; GO:0006281
Pfam:PF02872 5_nucleotid_C > GO:hydrolase activity ; GO:0016787
Pfam:PF02872 5_nucleotid_C > GO:nucleotide catabolic process ; GO:0009166
Pfam:PF02873 MurB_C > GO:UDP-N-acetylmuramate dehydrogenase activity ; GO:0008762
Pfam:PF02873 MurB_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02874 ATP-synt_ab_N > GO:proton transport ; GO:0015992
Pfam:PF02874 ATP-synt_ab_N > GO:ATP metabolic process ; GO:0046034
Pfam:PF02875 Mur_ligase_C > GO:ATP binding ; GO:0005524
Pfam:PF02875 Mur_ligase_C > GO:ligase activity ; GO:0016874
Pfam:PF02875 Mur_ligase_C > GO:biosynthetic process ; GO:0009058
Pfam:PF02876 Stap_Strp_tox_C > GO:pathogenesis ; GO:0009405
Pfam:PF02876 Stap_Strp_tox_C > GO:extracellular region ; GO:0005576
Pfam:PF02877 PARP_reg > GO:NAD+ ADP-ribosyltransferase activity ; GO:0003950
Pfam:PF02877 PARP_reg > GO:protein ADP-ribosylation ; GO:0006471
Pfam:PF02878 PGM_PMM_I > GO:intramolecular transferase activity, phosphotransferases ; GO:0016868
Pfam:PF02878 PGM_PMM_I > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02879 PGM_PMM_II > GO:intramolecular transferase activity, phosphotransferases ; GO:0016868
Pfam:PF02879 PGM_PMM_II > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02880 PGM_PMM_III > GO:intramolecular transferase activity, phosphotransferases ; GO:0016868
Pfam:PF02880 PGM_PMM_III > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02881 SRP54_N > GO:GTP binding ; GO:0005525
Pfam:PF02881 SRP54_N > GO:SRP-dependent cotranslational protein targeting to membrane ; GO:0006614
Pfam:PF02882 THF_DHG_CYH_C > GO:catalytic activity ; GO:0003824
Pfam:PF02882 THF_DHG_CYH_C > GO:methylenetetrahydrofolate dehydrogenase (NADP+) activity ; GO:0004488
Pfam:PF02882 THF_DHG_CYH_C > GO:folic acid-containing compound biosynthetic process ; GO:0009396
Pfam:PF02882 THF_DHG_CYH_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02883 Alpha_adaptinC2 > GO:intracellular protein transport ; GO:0006886
Pfam:PF02883 Alpha_adaptinC2 > GO:vesicle-mediated transport ; GO:0016192
Pfam:PF02883 Alpha_adaptinC2 > GO:clathrin adaptor complex ; GO:0030131
Pfam:PF02884 Lyase_8_C > GO:lyase activity ; GO:0016829
Pfam:PF02884 Lyase_8_C > GO:extracellular region ; GO:0005576
Pfam:PF02886 LBP_BPI_CETP_C > GO:lipid binding ; GO:0008289
Pfam:PF02888 CaMBD > GO:calmodulin binding ; GO:0005516
Pfam:PF02888 CaMBD > GO:calcium-activated potassium channel activity ; GO:0015269
Pfam:PF02888 CaMBD > GO:potassium ion transport ; GO:0006813
Pfam:PF02888 CaMBD > GO:integral component of membrane ; GO:0016021
Pfam:PF02891 zf-MIZ > GO:zinc ion binding ; GO:0008270
Pfam:PF02892 zf-BED > GO:DNA binding ; GO:0003677
Pfam:PF02894 GFO_IDH_MocA_C > GO:oxidoreductase activity ; GO:0016491
Pfam:PF02894 GFO_IDH_MocA_C > GO:metabolic process ; GO:0008152
Pfam:PF02894 GFO_IDH_MocA_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02895 H-kinase_dim > GO:phosphorelay sensor kinase activity ; GO:0000155
Pfam:PF02895 H-kinase_dim > GO:protein histidine kinase activity ; GO:0004673
Pfam:PF02895 H-kinase_dim > GO:phosphorelay signal transduction system ; GO:0000160
Pfam:PF02895 H-kinase_dim > GO:chemotaxis ; GO:0006935
Pfam:PF02895 H-kinase_dim > GO:cytoplasm ; GO:0005737
Pfam:PF02896 PEP-utilizers_C > GO:transferase activity, transferring phosphorus-containing groups ; GO:0016772
Pfam:PF02896 PEP-utilizers_C > GO:phosphorylation ; GO:0016310
Pfam:PF02897 Peptidase_S9_N > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF02897 Peptidase_S9_N > GO:serine-type exopeptidase activity ; GO:0070008
Pfam:PF02898 NO_synthase > GO:nitric-oxide synthase activity ; GO:0004517
Pfam:PF02898 NO_synthase > GO:nitric oxide biosynthetic process ; GO:0006809
Pfam:PF02898 NO_synthase > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02899 Phage_int_SAM_1 > GO:DNA binding ; GO:0003677
Pfam:PF02899 Phage_int_SAM_1 > GO:DNA integration ; GO:0015074
Pfam:PF02900 LigB > GO:ferrous iron binding ; GO:0008198
Pfam:PF02900 LigB > GO:oxidoreductase activity ; GO:0016491
Pfam:PF02900 LigB > GO:cellular aromatic compound metabolic process ; GO:0006725
Pfam:PF02901 PFL > GO:catalytic activity ; GO:0003824
Pfam:PF02902 Peptidase_C48 > GO:cysteine-type peptidase activity ; GO:0008234
Pfam:PF02902 Peptidase_C48 > GO:proteolysis ; GO:0006508
Pfam:PF02903 Alpha-amylase_N > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF02903 Alpha-amylase_N > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02905 EBV-NA1 > GO:DNA binding ; GO:0003677
Pfam:PF02905 EBV-NA1 > GO:DNA replication origin binding ; GO:0003688
Pfam:PF02905 EBV-NA1 > GO:DNA replication ; GO:0006260
Pfam:PF02905 EBV-NA1 > GO:regulation of DNA replication ; GO:0006275
Pfam:PF02905 EBV-NA1 > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF02905 EBV-NA1 > GO:host cell nucleus ; GO:0042025
Pfam:PF02907 Peptidase_S29 > GO:serine-type peptidase activity ; GO:0008236
Pfam:PF02907 Peptidase_S29 > GO:proteolysis ; GO:0006508
Pfam:PF02907 Peptidase_S29 > GO:transformation of host cell by virus ; GO:0019087
Pfam:PF02909 TetR_C > GO:negative regulation of transcription, DNA-templated ; GO:0045892
Pfam:PF02910 Succ_DH_flav_C > GO:oxidoreductase activity ; GO:0016491
Pfam:PF02910 Succ_DH_flav_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02911 Formyl_trans_C > GO:hydroxymethyl-, formyl- and related transferase activity ; GO:0016742
Pfam:PF02911 Formyl_trans_C > GO:biosynthetic process ; GO:0009058
Pfam:PF02912 Phe_tRNA-synt_N > GO:nucleotide binding ; GO:0000166
Pfam:PF02912 Phe_tRNA-synt_N > GO:phenylalanine-tRNA ligase activity ; GO:0004826
Pfam:PF02912 Phe_tRNA-synt_N > GO:ATP binding ; GO:0005524
Pfam:PF02912 Phe_tRNA-synt_N > GO:phenylalanyl-tRNA aminoacylation ; GO:0006432
Pfam:PF02912 Phe_tRNA-synt_N > GO:cytoplasm ; GO:0005737
Pfam:PF02913 FAD-oxidase_C > GO:catalytic activity ; GO:0003824
Pfam:PF02913 FAD-oxidase_C > GO:flavin adenine dinucleotide binding ; GO:0050660
Pfam:PF02914 DDE_2 > GO:DNA binding ; GO:0003677
Pfam:PF02914 DDE_2 > GO:transposase activity ; GO:0004803
Pfam:PF02914 DDE_2 > GO:transposition, DNA-mediated ; GO:0006313
Pfam:PF02914 DDE_2 > GO:DNA integration ; GO:0015074
Pfam:PF02915 Rubrerythrin > GO:oxidoreductase activity ; GO:0016491
Pfam:PF02915 Rubrerythrin > GO:metal ion binding ; GO:0046872
Pfam:PF02915 Rubrerythrin > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02916 DNA_PPF > GO:DNA replication ; GO:0006260
Pfam:PF02917 Pertussis_S1 > GO:NAD+ ADP-ribosyltransferase activity ; GO:0003950
Pfam:PF02917 Pertussis_S1 > GO:pathogenesis ; GO:0009405
Pfam:PF02917 Pertussis_S1 > GO:extracellular region ; GO:0005576
Pfam:PF02918 Pertussis_S2S3 > GO:pathogenesis ; GO:0009405
Pfam:PF02918 Pertussis_S2S3 > GO:extracellular region ; GO:0005576
Pfam:PF02919 Topoisom_I_N > GO:DNA binding ; GO:0003677
Pfam:PF02919 Topoisom_I_N > GO:DNA topoisomerase type I activity ; GO:0003917
Pfam:PF02919 Topoisom_I_N > GO:DNA topological change ; GO:0006265
Pfam:PF02919 Topoisom_I_N > GO:chromosome ; GO:0005694
Pfam:PF02920 Integrase_DNA > GO:DNA binding ; GO:0003677
Pfam:PF02920 Integrase_DNA > GO:integrase activity ; GO:0008907
Pfam:PF02920 Integrase_DNA > GO:DNA integration ; GO:0015074
Pfam:PF02921 UCR_TM > GO:ubiquinol-cytochrome-c reductase activity ; GO:0008121
Pfam:PF02921 UCR_TM > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02922 CBM_48 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF02922 CBM_48 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02924 HDPD > GO:viral capsid ; GO:0019028
Pfam:PF02925 gpD > GO:viral procapsid maturation ; GO:0046797
Pfam:PF02926 THUMP > GO:RNA binding ; GO:0003723
Pfam:PF02927 CelD_N > GO:cellulase activity ; GO:0008810
Pfam:PF02927 CelD_N > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02928 zf-C5HC2 > GO:nucleus ; GO:0005634
Pfam:PF02929 Bgal_small_N > GO:beta-galactosidase activity ; GO:0004565
Pfam:PF02929 Bgal_small_N > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02929 Bgal_small_N > GO:beta-galactosidase complex ; GO:0009341
Pfam:PF02931 Neur_chan_LBD > GO:extracellular ligand-gated ion channel activity ; GO:0005230
Pfam:PF02931 Neur_chan_LBD > GO:transport ; GO:0006810
Pfam:PF02931 Neur_chan_LBD > GO:membrane ; GO:0016020
Pfam:PF02932 Neur_chan_memb > GO:ion transport ; GO:0006811
Pfam:PF02932 Neur_chan_memb > GO:membrane ; GO:0016020
Pfam:PF02934 GatB_N > GO:ligase activity ; GO:0016874
Pfam:PF02935 COX7C > GO:cytochrome-c oxidase activity ; GO:0004129
Pfam:PF02936 COX4 > GO:cytochrome-c oxidase activity ; GO:0004129
Pfam:PF02937 COX6C > GO:cytochrome-c oxidase activity ; GO:0004129
Pfam:PF02939 UcrQ > GO:ubiquinol-cytochrome-c reductase activity ; GO:0008121
Pfam:PF02940 mRNA_triPase > GO:polynucleotide 5'-phosphatase activity ; GO:0004651
Pfam:PF02940 mRNA_triPase > GO:transferase activity ; GO:0016740
Pfam:PF02941 FeThRed_A > GO:photosynthesis ; GO:0015979
Pfam:PF02943 FeThRed_B > GO:oxidoreductase activity, acting on iron-sulfur proteins as donors ; GO:0016730
Pfam:PF02943 FeThRed_B > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02944 BESS > GO:DNA binding ; GO:0003677
Pfam:PF02947 Flt3_lig > GO:cytokine activity ; GO:0005125
Pfam:PF02947 Flt3_lig > GO:membrane ; GO:0016020
Pfam:PF02948 Amelogenin > GO:multicellular organismal development ; GO:0007275
Pfam:PF02948 Amelogenin > GO:proteinaceous extracellular matrix ; GO:0005578
Pfam:PF02949 7tm_6 > GO:olfactory receptor activity ; GO:0004984
Pfam:PF02949 7tm_6 > GO:odorant binding ; GO:0005549
Pfam:PF02949 7tm_6 > GO:sensory perception of smell ; GO:0007608
Pfam:PF02949 7tm_6 > GO:membrane ; GO:0016020
Pfam:PF02950 Conotoxin > GO:ion channel inhibitor activity ; GO:0008200
Pfam:PF02950 Conotoxin > GO:pathogenesis ; GO:0009405
Pfam:PF02950 Conotoxin > GO:extracellular region ; GO:0005576
Pfam:PF02951 GSH-S_N > GO:glutathione synthase activity ; GO:0004363
Pfam:PF02951 GSH-S_N > GO:glutathione biosynthetic process ; GO:0006750
Pfam:PF02952 Fucose_iso_C > GO:L-fucose isomerase activity ; GO:0008736
Pfam:PF02952 Fucose_iso_C > GO:fucose metabolic process ; GO:0006004
Pfam:PF02952 Fucose_iso_C > GO:cytoplasm ; GO:0005737
Pfam:PF02954 HTH_8 > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF02955 GSH-S_ATP > GO:glutathione synthase activity ; GO:0004363
Pfam:PF02955 GSH-S_ATP > GO:ATP binding ; GO:0005524
Pfam:PF02955 GSH-S_ATP > GO:glutathione biosynthetic process ; GO:0006750
Pfam:PF02959 Tax > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF02961 BAF > GO:DNA binding ; GO:0003677
Pfam:PF02962 CHMI > GO:5-carboxymethyl-2-hydroxymuconate delta-isomerase activity ; GO:0008704
Pfam:PF02962 CHMI > GO:aromatic compound catabolic process ; GO:0019439
Pfam:PF02963 EcoRI > GO:magnesium ion binding ; GO:0000287
Pfam:PF02963 EcoRI > GO:DNA binding ; GO:0003677
Pfam:PF02963 EcoRI > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF02963 EcoRI > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF02964 MeMO_Hyd_G > GO:methane monooxygenase activity ; GO:0015049
Pfam:PF02964 MeMO_Hyd_G > GO:methane metabolic process ; GO:0015947
Pfam:PF02965 Met_synt_B12 > GO:methionine synthase activity ; GO:0008705
Pfam:PF02965 Met_synt_B12 > GO:methionine biosynthetic process ; GO:0009086
Pfam:PF02965 Met_synt_B12 > GO:intracellular ; GO:0005622
Pfam:PF02966 DIM1 > GO:mitotic nuclear division ; GO:0007067
Pfam:PF02966 DIM1 > GO:spliceosomal complex ; GO:0005681
Pfam:PF02969 TAF > GO:DNA-templated transcription, initiation ; GO:0006352
Pfam:PF02969 TAF > GO:nucleus ; GO:0005634
Pfam:PF02970 TBCA > GO:unfolded protein binding ; GO:0051082
Pfam:PF02970 TBCA > GO:tubulin complex assembly ; GO:0007021
Pfam:PF02970 TBCA > GO:microtubule ; GO:0005874
Pfam:PF02971 FTCD > GO:folic acid binding ; GO:0005542
Pfam:PF02971 FTCD > GO:transferase activity ; GO:0016740
Pfam:PF02971 FTCD > GO:metabolic process ; GO:0008152
Pfam:PF02972 Phycoerythr_ab > GO:phycobilisome ; GO:0030089
Pfam:PF02973 Sialidase > GO:exo-alpha-sialidase activity ; GO:0004308
Pfam:PF02973 Sialidase > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF02975 Me-amine-dh_L > GO:oxidoreductase activity, acting on the CH-NH2 group of donors ; GO:0016638
Pfam:PF02975 Me-amine-dh_L > GO:amine metabolic process ; GO:0009308
Pfam:PF02975 Me-amine-dh_L > GO:oxidation-reduction process ; GO:0055114
Pfam:PF02975 Me-amine-dh_L > GO:periplasmic space ; GO:0042597
Pfam:PF02976 MutH > GO:DNA binding ; GO:0003677
Pfam:PF02976 MutH > GO:endonuclease activity ; GO:0004519
Pfam:PF02978 SRP_SPB > GO:7S RNA binding ; GO:0008312
Pfam:PF02978 SRP_SPB > GO:SRP-dependent cotranslational protein targeting to membrane ; GO:0006614
Pfam:PF02978 SRP_SPB > GO:signal recognition particle ; GO:0048500
Pfam:PF02979 NHase_alpha > GO:catalytic activity ; GO:0003824
Pfam:PF02979 NHase_alpha > GO:transition metal ion binding ; GO:0046914
Pfam:PF02979 NHase_alpha > GO:nitrogen compound metabolic process ; GO:0006807
Pfam:PF02980 FokI_C > GO:DNA binding ; GO:0003677
Pfam:PF02980 FokI_C > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF02980 FokI_C > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF02981 FokI_N > GO:DNA binding ; GO:0003677
Pfam:PF02981 FokI_N > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF02981 FokI_N > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF02982 Scytalone_dh > GO:scytalone dehydratase activity ; GO:0030411
Pfam:PF02982 Scytalone_dh > GO:melanin metabolic process ; GO:0006582
Pfam:PF02983 Pro_Al_protease > GO:serine-type peptidase activity ; GO:0008236
Pfam:PF02983 Pro_Al_protease > GO:proteolysis ; GO:0006508
Pfam:PF02983 Pro_Al_protease > GO:extracellular region ; GO:0005576
Pfam:PF02984 Cyclin_C > GO:nucleus ; GO:0005634
Pfam:PF02985 HEAT > GO:protein binding ; GO:0005515
Pfam:PF02988 PLA2_inh > GO:phospholipase inhibitor activity ; GO:0004859
Pfam:PF02988 PLA2_inh > GO:extracellular region ; GO:0005576
Pfam:PF02990 EMP70 > GO:integral component of membrane ; GO:0016021
Pfam:PF02993 MCPVI > GO:viral capsid ; GO:0019028
Pfam:PF02996 Prefoldin > GO:unfolded protein binding ; GO:0051082
Pfam:PF02996 Prefoldin > GO:protein folding ; GO:0006457
Pfam:PF02996 Prefoldin > GO:prefoldin complex ; GO:0016272
Pfam:PF02998 Lentiviral_Tat > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF03002 Somatostatin > GO:hormone activity ; GO:0005179
Pfam:PF03002 Somatostatin > GO:extracellular region ; GO:0005576
Pfam:PF03006 HlyIII > GO:integral component of membrane ; GO:0016021
Pfam:PF03007 WES_acyltransf > GO:diacylglycerol O-acyltransferase activity ; GO:0004144
Pfam:PF03007 WES_acyltransf > GO:glycerolipid biosynthetic process ; GO:0045017
Pfam:PF03012 PP_M1 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF03012 PP_M1 > GO:viral transcription ; GO:0019083
Pfam:PF03014 SP2 > GO:structural molecule activity ; GO:0005198
Pfam:PF03015 Sterile > GO:fatty-acyl-CoA reductase (alcohol-forming) activity ; GO:0080019
Pfam:PF03026 CM1 > GO:viral capsid ; GO:0019028
Pfam:PF03028 Dynein_heavy > GO:microtubule motor activity ; GO:0003777
Pfam:PF03028 Dynein_heavy > GO:microtubule-based movement ; GO:0007018
Pfam:PF03028 Dynein_heavy > GO:dynein complex ; GO:0030286
Pfam:PF03029 ATP_bind_1 > GO:nucleotide binding ; GO:0000166
Pfam:PF03030 H_PPase > GO:inorganic diphosphatase activity ; GO:0004427
Pfam:PF03030 H_PPase > GO:hydrogen-translocating pyrophosphatase activity ; GO:0009678
Pfam:PF03030 H_PPase > GO:proton transport ; GO:0015992
Pfam:PF03030 H_PPase > GO:membrane ; GO:0016020
Pfam:PF03031 NIF > GO:protein binding ; GO:0005515
Pfam:PF03032 Brevenin > GO:defense response ; GO:0006952
Pfam:PF03032 Brevenin > GO:defense response to bacterium ; GO:0042742
Pfam:PF03032 Brevenin > GO:extracellular region ; GO:0005576
Pfam:PF03033 Glyco_transf_28 > GO:transferase activity, transferring hexosyl groups ; GO:0016758
Pfam:PF03033 Glyco_transf_28 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF03033 Glyco_transf_28 > GO:lipid glycosylation ; GO:0030259
Pfam:PF03034 PSS > GO:phosphatidylserine biosynthetic process ; GO:0006659
Pfam:PF03037 KMP11 > GO:defense response ; GO:0006952
Pfam:PF03037 KMP11 > GO:positive regulation of cell proliferation ; GO:0008284
Pfam:PF03039 IL12 > GO:interleukin-12 receptor binding ; GO:0005143
Pfam:PF03039 IL12 > GO:growth factor activity ; GO:0008083
Pfam:PF03039 IL12 > GO:immune response ; GO:0006955
Pfam:PF03039 IL12 > GO:extracellular region ; GO:0005576
Pfam:PF03040 CemA > GO:integral component of membrane ; GO:0016021
Pfam:PF03041 Baculo_LEF-2 > GO:viral transcription ; GO:0019083
Pfam:PF03047 ComC > GO:pheromone activity ; GO:0005186
Pfam:PF03051 Peptidase_C1_2 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF03051 Peptidase_C1_2 > GO:proteolysis ; GO:0006508
Pfam:PF03052 Adeno_52K > GO:virion assembly ; GO:0019068
Pfam:PF03054 tRNA_Me_trans > GO:transferase activity ; GO:0016740
Pfam:PF03054 tRNA_Me_trans > GO:tRNA processing ; GO:0008033
Pfam:PF03054 tRNA_Me_trans > GO:cytoplasm ; GO:0005737
Pfam:PF03059 NAS > GO:nicotianamine synthase activity ; GO:0030410
Pfam:PF03059 NAS > GO:nicotianamine biosynthetic process ; GO:0030418
Pfam:PF03060 NMO > GO:nitronate monooxygenase activity ; GO:0018580
Pfam:PF03060 NMO > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03063 Prismane > GO:oxidoreductase activity ; GO:0016491
Pfam:PF03063 Prismane > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03065 Glyco_hydro_57 > GO:catalytic activity ; GO:0003824
Pfam:PF03065 Glyco_hydro_57 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF03067 Chitin_bind_3 > GO:viral capsid ; GO:0019028
Pfam:PF03068 PAD > GO:protein-arginine deiminase activity ; GO:0004668
Pfam:PF03068 PAD > GO:calcium ion binding ; GO:0005509
Pfam:PF03068 PAD > GO:cytoplasm ; GO:0005737
Pfam:PF03069 FmdA_AmdA > GO:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides ; GO:0016811
Pfam:PF03071 GNT-I > GO:acetylglucosaminyltransferase activity ; GO:0008375
Pfam:PF03071 GNT-I > GO:protein glycosylation ; GO:0006486
Pfam:PF03073 TspO_MBR > GO:integral component of membrane ; GO:0016021
Pfam:PF03074 GCS > GO:glutamate-cysteine ligase activity ; GO:0004357
Pfam:PF03074 GCS > GO:glutathione biosynthetic process ; GO:0006750
Pfam:PF03079 ARD > GO:acireductone dioxygenase [iron(II)-requiring] activity ; GO:0010309
Pfam:PF03079 ARD > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03081 Exo70 > GO:exocytosis ; GO:0006887
Pfam:PF03081 Exo70 > GO:exocyst ; GO:0000145
Pfam:PF03082 MAGSP > GO:mating ; GO:0007618
Pfam:PF03082 MAGSP > GO:extracellular region ; GO:0005576
Pfam:PF03088 Str_synth > GO:strictosidine synthase activity ; GO:0016844
Pfam:PF03088 Str_synth > GO:biosynthetic process ; GO:0009058
Pfam:PF03089 RAG2 > GO:DNA binding ; GO:0003677
Pfam:PF03089 RAG2 > GO:DNA recombination ; GO:0006310
Pfam:PF03089 RAG2 > GO:nucleus ; GO:0005634
Pfam:PF03091 CutA1 > GO:response to metal ion ; GO:0010038
Pfam:PF03094 Mlo > GO:defense response ; GO:0006952
Pfam:PF03094 Mlo > GO:integral component of membrane ; GO:0016021
Pfam:PF03095 PTPA > GO:phosphatase activator activity ; GO:0019211
Pfam:PF03099 BPL_LplA_LipB > GO:cellular protein modification process ; GO:0006464
Pfam:PF03100 CcmE > GO:protein-heme linkage ; GO:0017003
Pfam:PF03100 CcmE > GO:cytochrome complex assembly ; GO:0017004
Pfam:PF03100 CcmE > GO:plasma membrane ; GO:0005886
Pfam:PF03102 NeuB > GO:carbohydrate biosynthetic process ; GO:0016051
Pfam:PF03104 DNA_pol_B_exo1 > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF03106 WRKY > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF03106 WRKY > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF03106 WRKY > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF03110 SBP > GO:DNA binding ; GO:0003677
Pfam:PF03110 SBP > GO:nucleus ; GO:0005634
Pfam:PF03114 BAR > GO:protein binding ; GO:0005515
Pfam:PF03114 BAR > GO:cytoplasm ; GO:0005737
Pfam:PF03116 NQR2_RnfD_RnfE > GO:transport ; GO:0006810
Pfam:PF03116 NQR2_RnfD_RnfE > GO:membrane ; GO:0016020
Pfam:PF03117 Herpes_UL49_1 > GO:viral process ; GO:0016032
Pfam:PF03117 Herpes_UL49_1 > GO:viral tegument ; GO:0019033
Pfam:PF03118 RNA_pol_A_CTD > GO:DNA binding ; GO:0003677
Pfam:PF03118 RNA_pol_A_CTD > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF03118 RNA_pol_A_CTD > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF03119 DNA_ligase_ZBD > GO:DNA ligase (NAD+) activity ; GO:0003911
Pfam:PF03119 DNA_ligase_ZBD > GO:DNA replication ; GO:0006260
Pfam:PF03119 DNA_ligase_ZBD > GO:DNA repair ; GO:0006281
Pfam:PF03120 DNA_ligase_OB > GO:DNA ligase (NAD+) activity ; GO:0003911
Pfam:PF03120 DNA_ligase_OB > GO:DNA replication ; GO:0006260
Pfam:PF03120 DNA_ligase_OB > GO:DNA repair ; GO:0006281
Pfam:PF03121 Herpes_UL52 > GO:DNA primase activity ; GO:0003896
Pfam:PF03121 Herpes_UL52 > GO:DNA replication ; GO:0006260
Pfam:PF03122 Herpes_MCP > GO:structural molecule activity ; GO:0005198
Pfam:PF03122 Herpes_MCP > GO:viral capsid ; GO:0019028
Pfam:PF03123 CAT_RBD > GO:RNA binding ; GO:0003723
Pfam:PF03124 EXS > GO:integral component of membrane ; GO:0016021
Pfam:PF03125 Sre > GO:sensory perception of chemical stimulus ; GO:0007606
Pfam:PF03125 Sre > GO:integral component of membrane ; GO:0016021
Pfam:PF03126 Plus-3 > GO:DNA binding ; GO:0003677
Pfam:PF03126 Plus-3 > GO:DNA-templated transcription, initiation ; GO:0006352
Pfam:PF03126 Plus-3 > GO:histone modification ; GO:0016570
Pfam:PF03126 Plus-3 > GO:nucleus ; GO:0005634
Pfam:PF03127 GAT > GO:intracellular protein transport ; GO:0006886
Pfam:PF03127 GAT > GO:intracellular ; GO:0005622
Pfam:PF03131 bZIP_Maf > GO:DNA binding ; GO:0003677
Pfam:PF03131 bZIP_Maf > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF03131 bZIP_Maf > GO:nucleus ; GO:0005634
Pfam:PF03133 TTL > GO:cellular protein modification process ; GO:0006464
Pfam:PF03135 CagE_TrbE_VirB > GO:ATP binding ; GO:0005524
Pfam:PF03136 Pup_ligase > GO:proteasomal protein catabolic process ; GO:0010498
Pfam:PF03136 Pup_ligase > GO:modification-dependent protein catabolic process ; GO:0019941
Pfam:PF03137 OATP > GO:transporter activity ; GO:0005215
Pfam:PF03137 OATP > GO:transport ; GO:0006810
Pfam:PF03137 OATP > GO:membrane ; GO:0016020
Pfam:PF03139 AnfG_VnfG > GO:nitrogenase activity ; GO:0016163
Pfam:PF03139 AnfG_VnfG > GO:nitrogen fixation ; GO:0009399
Pfam:PF03139 AnfG_VnfG > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03141 Methyltransf_29 > GO:methyltransferase activity ; GO:0008168
Pfam:PF03143 GTP_EFTU_D3 > GO:GTP binding ; GO:0005525
Pfam:PF03144 GTP_EFTU_D2 > GO:GTP binding ; GO:0005525
Pfam:PF03145 Sina > GO:ubiquitin-dependent protein catabolic process ; GO:0006511
Pfam:PF03145 Sina > GO:multicellular organismal development ; GO:0007275
Pfam:PF03145 Sina > GO:nucleus ; GO:0005634
Pfam:PF03146 NtA > GO:laminin binding ; GO:0043236
Pfam:PF03146 NtA > GO:G-protein coupled acetylcholine receptor signaling pathway ; GO:0007213
Pfam:PF03146 NtA > GO:receptor clustering ; GO:0043113
Pfam:PF03147 FDX-ACB > GO:tRNA binding ; GO:0000049
Pfam:PF03147 FDX-ACB > GO:magnesium ion binding ; GO:0000287
Pfam:PF03147 FDX-ACB > GO:phenylalanine-tRNA ligase activity ; GO:0004826
Pfam:PF03147 FDX-ACB > GO:ATP binding ; GO:0005524
Pfam:PF03147 FDX-ACB > GO:phenylalanyl-tRNA aminoacylation ; GO:0006432
Pfam:PF03147 FDX-ACB > GO:tRNA processing ; GO:0008033
Pfam:PF03150 CCP_MauG > GO:oxidoreductase activity ; GO:0016491
Pfam:PF03150 CCP_MauG > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03152 UFD1 > GO:ubiquitin-dependent protein catabolic process ; GO:0006511
Pfam:PF03153 TFIIA > GO:transcription initiation from RNA polymerase II promoter ; GO:0006367
Pfam:PF03153 TFIIA > GO:transcription factor TFIIA complex ; GO:0005672
Pfam:PF03155 Alg6_Alg8 > GO:transferase activity, transferring hexosyl groups ; GO:0016758
Pfam:PF03155 Alg6_Alg8 > GO:endoplasmic reticulum membrane ; GO:0005789
Pfam:PF03157 Glutenin_hmw > GO:nutrient reservoir activity ; GO:0045735
Pfam:PF03159 XRN_N > GO:nucleic acid binding ; GO:0003676
Pfam:PF03159 XRN_N > GO:exonuclease activity ; GO:0004527
Pfam:PF03160 Calx-beta > GO:cell communication ; GO:0007154
Pfam:PF03160 Calx-beta > GO:integral component of membrane ; GO:0016021
Pfam:PF03161 LAGLIDADG_2 > GO:endonuclease activity ; GO:0004519
Pfam:PF03165 MH1 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF03165 MH1 > GO:intracellular ; GO:0005622
Pfam:PF03166 MH2 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF03166 MH2 > GO:intracellular ; GO:0005622
Pfam:PF03169 OPT > GO:transmembrane transport ; GO:0055085
Pfam:PF03170 BcsB > GO:UDP-glucose metabolic process ; GO:0006011
Pfam:PF03170 BcsB > GO:membrane ; GO:0016020
Pfam:PF03171 2OG-FeII_Oxy > GO:oxidoreductase activity ; GO:0016491
Pfam:PF03171 2OG-FeII_Oxy > GO:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors ; GO:0016706
Pfam:PF03171 2OG-FeII_Oxy > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03172 Sp100 > GO:nucleus ; GO:0005634
Pfam:PF03175 DNA_pol_B_2 > GO:nucleotide binding ; GO:0000166
Pfam:PF03175 DNA_pol_B_2 > GO:DNA binding ; GO:0003677
Pfam:PF03175 DNA_pol_B_2 > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF03175 DNA_pol_B_2 > GO:3'-5' exonuclease activity ; GO:0008408
Pfam:PF03175 DNA_pol_B_2 > GO:DNA replication ; GO:0006260
Pfam:PF03176 MMPL > GO:membrane ; GO:0016020
Pfam:PF03178 CPSF_A > GO:nucleic acid binding ; GO:0003676
Pfam:PF03178 CPSF_A > GO:nucleus ; GO:0005634
Pfam:PF03184 DDE_1 > GO:nucleic acid binding ; GO:0003676
Pfam:PF03185 CaKB > GO:calcium-activated potassium channel activity ; GO:0015269
Pfam:PF03185 CaKB > GO:potassium ion transport ; GO:0006813
Pfam:PF03185 CaKB > GO:membrane ; GO:0016020
Pfam:PF03186 CobD_Cbib > GO:threonine-phosphate decarboxylase activity ; GO:0048472
Pfam:PF03186 CobD_Cbib > GO:cobalamin biosynthetic process ; GO:0009236
Pfam:PF03186 CobD_Cbib > GO:integral component of membrane ; GO:0016021
Pfam:PF03188 Cytochrom_B561 > GO:integral component of membrane ; GO:0016021
Pfam:PF03193 DUF258 > GO:GTPase activity ; GO:0003924
Pfam:PF03193 DUF258 > GO:GTP binding ; GO:0005525
Pfam:PF03194 LUC7 > GO:mRNA binding ; GO:0003729
Pfam:PF03194 LUC7 > GO:mRNA splice site selection ; GO:0006376
Pfam:PF03194 LUC7 > GO:U1 snRNP ; GO:0005685
Pfam:PF03199 GSH_synthase > GO:glutathione synthase activity ; GO:0004363
Pfam:PF03199 GSH_synthase > GO:ATP binding ; GO:0005524
Pfam:PF03199 GSH_synthase > GO:glutathione biosynthetic process ; GO:0006750
Pfam:PF03200 Glyco_hydro_63 > GO:mannosyl-oligosaccharide glucosidase activity ; GO:0004573
Pfam:PF03200 Glyco_hydro_63 > GO:oligosaccharide metabolic process ; GO:0009311
Pfam:PF03201 HMD > GO:coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase activity ; GO:0018537
Pfam:PF03201 HMD > GO:N5,N10-methenyltetrahydromethanopterin hydrogenase activity ; GO:0047068
Pfam:PF03201 HMD > GO:methanogenesis ; GO:0015948
Pfam:PF03201 HMD > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03206 NifW > GO:nitrogen fixation ; GO:0009399
Pfam:PF03211 Pectate_lyase > GO:pectate lyase activity ; GO:0030570
Pfam:PF03211 Pectate_lyase > GO:extracellular region ; GO:0005576
Pfam:PF03213 Pox_P35 > GO:viral envelope ; GO:0019031
Pfam:PF03214 RGP > GO:intramolecular transferase activity ; GO:0016866
Pfam:PF03214 RGP > GO:cellulose biosynthetic process ; GO:0030244
Pfam:PF03216 Rhabdo_ncap_2 > GO:viral nucleocapsid ; GO:0019013
Pfam:PF03219 TLC > GO:ATP:ADP antiporter activity ; GO:0005471
Pfam:PF03219 TLC > GO:ATP binding ; GO:0005524
Pfam:PF03219 TLC > GO:transport ; GO:0006810
Pfam:PF03219 TLC > GO:integral component of membrane ; GO:0016021
Pfam:PF03220 Tombus_P19 > GO:virion ; GO:0019012
Pfam:PF03222 Trp_Tyr_perm > GO:amino acid transmembrane transport ; GO:0003333
Pfam:PF03223 V-ATPase_C > GO:hydrogen ion transmembrane transporter activity ; GO:0015078
Pfam:PF03223 V-ATPase_C > GO:ATP hydrolysis coupled proton transport ; GO:0015991
Pfam:PF03223 V-ATPase_C > GO:proton-transporting V-type ATPase, V1 domain ; GO:0033180
Pfam:PF03224 V-ATPase_H_N > GO:proton-transporting ATPase activity, rotational mechanism ; GO:0046961
Pfam:PF03224 V-ATPase_H_N > GO:ATP hydrolysis coupled proton transport ; GO:0015991
Pfam:PF03224 V-ATPase_H_N > GO:vacuolar proton-transporting V-type ATPase, V1 domain ; GO:0000221
Pfam:PF03228 Adeno_VII > GO:viral capsid ; GO:0019028
Pfam:PF03229 Alpha_GJ > GO:suppression by virus of host apoptotic process ; GO:0019050
Pfam:PF03232 COQ7 > GO:ubiquinone biosynthetic process ; GO:0006744
Pfam:PF03232 COQ7 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03233 Cauli_AT > GO:transmission of virus ; GO:0019089
Pfam:PF03234 CDC37_N > GO:protein kinase binding ; GO:0019901
Pfam:PF03239 FTR1 > GO:iron ion transmembrane transporter activity ; GO:0005381
Pfam:PF03239 FTR1 > GO:high-affinity iron ion transport ; GO:0006827
Pfam:PF03239 FTR1 > GO:membrane ; GO:0016020
Pfam:PF03239 FTR1 > GO:high affinity iron permease complex ; GO:0033573
Pfam:PF03242 LEA_3 > GO:response to stress ; GO:0006950
Pfam:PF03243 MerB > GO:alkylmercury lyase activity ; GO:0018836
Pfam:PF03243 MerB > GO:organomercury catabolic process ; GO:0046413
Pfam:PF03244 PSI_PsaH > GO:photosynthesis ; GO:0015979
Pfam:PF03244 PSI_PsaH > GO:photosystem I ; GO:0009522
Pfam:PF03244 PSI_PsaH > GO:photosystem I reaction center ; GO:0009538
Pfam:PF03246 Pneumo_ncap > GO:RNA binding ; GO:0003723
Pfam:PF03246 Pneumo_ncap > GO:viral nucleocapsid ; GO:0019013
Pfam:PF03248 Rer1 > GO:integral component of membrane ; GO:0016021
Pfam:PF03249 TSA > GO:integral component of membrane ; GO:0016021
Pfam:PF03250 Tropomodulin > GO:tropomyosin binding ; GO:0005523
Pfam:PF03250 Tropomodulin > GO:cytoskeleton ; GO:0005856
Pfam:PF03253 UT > GO:urea transmembrane transporter activity ; GO:0015204
Pfam:PF03253 UT > GO:urea transmembrane transport ; GO:0071918
Pfam:PF03253 UT > GO:integral component of membrane ; GO:0016021
Pfam:PF03254 XG_FTase > GO:galactoside 2-alpha-L-fucosyltransferase activity ; GO:0008107
Pfam:PF03254 XG_FTase > GO:cell wall biogenesis ; GO:0042546
Pfam:PF03254 XG_FTase > GO:membrane ; GO:0016020
Pfam:PF03255 ACCA > GO:acetyl-CoA carboxylase activity ; GO:0003989
Pfam:PF03255 ACCA > GO:fatty acid biosynthetic process ; GO:0006633
Pfam:PF03255 ACCA > GO:acetyl-CoA carboxylase complex ; GO:0009317
Pfam:PF03260 Lipoprotein_11 > GO:extracellular region ; GO:0005576
Pfam:PF03261 CDK5_activator > GO:cyclin-dependent protein kinase 5 activator activity ; GO:0016534
Pfam:PF03261 CDK5_activator > GO:cyclin-dependent protein kinase 5 holoenzyme complex ; GO:0016533
Pfam:PF03265 DNase_II > GO:deoxyribonuclease II activity ; GO:0004531
Pfam:PF03265 DNase_II > GO:DNA metabolic process ; GO:0006259
Pfam:PF03266 NTPase_1 > GO:nucleotide phosphatase activity, acting on free nucleotides ; GO:0098519
Pfam:PF03271 EB1 > GO:microtubule binding ; GO:0008017
Pfam:PF03272 Enhancin > GO:viral process ; GO:0016032
Pfam:PF03273 Baculo_gp64 > GO:modulation by virus of host morphology or physiology ; GO:0019048
Pfam:PF03273 Baculo_gp64 > GO:viral envelope ; GO:0019031
Pfam:PF03274 Foamy_BEL > GO:viral process ; GO:0016032
Pfam:PF03274 Foamy_BEL > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF03275 GLF > GO:UDP-galactopyranose mutase activity ; GO:0008767
Pfam:PF03276 Gag_spuma > GO:viral release from host cell ; GO:0019076
Pfam:PF03276 Gag_spuma > GO:viral entry into host cell ; GO:0046718
Pfam:PF03276 Gag_spuma > GO:microtubule-dependent intracellular transport of viral material towards nucleus ; GO:0075521
Pfam:PF03276 Gag_spuma > GO:viral capsid ; GO:0019028
Pfam:PF03276 Gag_spuma > GO:host cell cytoplasm ; GO:0030430
Pfam:PF03276 Gag_spuma > GO:host cell nucleus ; GO:0042025
Pfam:PF03276 Gag_spuma > GO:host cytoskeleton ; GO:0044163
Pfam:PF03278 IpaB_EvcA > GO:pathogenesis ; GO:0009405
Pfam:PF03279 Lip_A_acyltrans > GO:transferase activity, transferring acyl groups ; GO:0016746
Pfam:PF03279 Lip_A_acyltrans > GO:lipopolysaccharide core region biosynthetic process ; GO:0009244
Pfam:PF03279 Lip_A_acyltrans > GO:integral component of membrane ; GO:0016021
Pfam:PF03280 Lipase_chap > GO:unfolded protein binding ; GO:0051082
Pfam:PF03280 Lipase_chap > GO:protein folding ; GO:0006457
Pfam:PF03280 Lipase_chap > GO:membrane ; GO:0016020
Pfam:PF03284 PHZA_PHZB > GO:antibiotic biosynthetic process ; GO:0017000
Pfam:PF03285 Paralemmin > GO:regulation of cell shape ; GO:0008360
Pfam:PF03285 Paralemmin > GO:membrane ; GO:0016020
Pfam:PF03286 Pox_Ag35 > GO:viral envelope ; GO:0019031
Pfam:PF03287 Pox_C7_F8A > GO:viral process ; GO:0016032
Pfam:PF03293 Pox_RNA_pol > GO:DNA binding ; GO:0003677
Pfam:PF03293 Pox_RNA_pol > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF03293 Pox_RNA_pol > GO:viral transcription ; GO:0019083
Pfam:PF03294 Pox_Rap94 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF03298 Stanniocalcin > GO:hormone activity ; GO:0005179
Pfam:PF03298 Stanniocalcin > GO:extracellular region ; GO:0005576
Pfam:PF03301 Trp_dioxygenase > GO:tryptophan 2,3-dioxygenase activity ; GO:0004833
Pfam:PF03301 Trp_dioxygenase > GO:heme binding ; GO:0020037
Pfam:PF03301 Trp_dioxygenase > GO:tryptophan catabolic process to kynurenine ; GO:0019441
Pfam:PF03306 AAL_decarboxy > GO:acetolactate decarboxylase activity ; GO:0047605
Pfam:PF03306 AAL_decarboxy > GO:acetoin biosynthetic process ; GO:0045151
Pfam:PF03307 Adeno_E3_15_3 > GO:evasion or tolerance of host defenses by virus ; GO:0019049
Pfam:PF03309 Pan_kinase > GO:pantothenate kinase activity ; GO:0004594
Pfam:PF03310 Cauli_DNA-bind > GO:DNA binding ; GO:0003677
Pfam:PF03311 Cornichon > GO:intracellular signal transduction ; GO:0035556
Pfam:PF03311 Cornichon > GO:membrane ; GO:0016020
Pfam:PF03315 SDH_beta > GO:L-serine ammonia-lyase activity ; GO:0003941
Pfam:PF03315 SDH_beta > GO:4 iron, 4 sulfur cluster binding ; GO:0051539
Pfam:PF03315 SDH_beta > GO:gluconeogenesis ; GO:0006094
Pfam:PF03320 FBPase_glpX > GO:fructose 1,6-bisphosphate 1-phosphatase activity ; GO:0042132
Pfam:PF03320 FBPase_glpX > GO:glycerol metabolic process ; GO:0006071
Pfam:PF03320 FBPase_glpX > GO:gluconeogenesis ; GO:0006094
Pfam:PF03323 GerA > GO:spore germination ; GO:0009847
Pfam:PF03323 GerA > GO:integral component of membrane ; GO:0016021
Pfam:PF03324 Herpes_HEPA > GO:viral genome replication ; GO:0019079
Pfam:PF03325 Herpes_PAP > GO:DNA polymerase processivity factor activity ; GO:0030337
Pfam:PF03325 Herpes_PAP > GO:viral genome replication ; GO:0019079
Pfam:PF03326 Herpes_TAF50 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF03327 Herpes_VP19C > GO:DNA binding ; GO:0003677
Pfam:PF03327 Herpes_VP19C > GO:viral capsid assembly ; GO:0019069
Pfam:PF03328 HpcH_HpaI > GO:catalytic activity ; GO:0003824
Pfam:PF03331 LpxC > GO:UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity ; GO:0008759
Pfam:PF03331 LpxC > GO:lipid A biosynthetic process ; GO:0009245
Pfam:PF03332 PMM > GO:phosphomannomutase activity ; GO:0004615
Pfam:PF03332 PMM > GO:mannose biosynthetic process ; GO:0019307
Pfam:PF03332 PMM > GO:cytoplasm ; GO:0005737
Pfam:PF03333 PapB > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF03334 PhaG_MnhG_YufB > GO:monovalent cation:proton antiporter activity ; GO:0005451
Pfam:PF03334 PhaG_MnhG_YufB > GO:monovalent inorganic cation transport ; GO:0015672
Pfam:PF03334 PhaG_MnhG_YufB > GO:proton transport ; GO:0015992
Pfam:PF03335 Phage_fiber > GO:structural molecule activity ; GO:0005198
Pfam:PF03337 Pox_F12L > GO:viral process ; GO:0016032
Pfam:PF03340 Pox_Rif > GO:response to antibiotic ; GO:0046677
Pfam:PF03341 Pox_mRNA-cap > GO:mRNA (guanine-N7-)-methyltransferase activity ; GO:0004482
Pfam:PF03341 Pox_mRNA-cap > GO:7-methylguanosine mRNA capping ; GO:0006370
Pfam:PF03345 DDOST_48kD > GO:dolichyl-diphosphooligosaccharide-protein glycotransferase activity ; GO:0004579
Pfam:PF03345 DDOST_48kD > GO:protein N-linked glycosylation via asparagine ; GO:0018279
Pfam:PF03345 DDOST_48kD > GO:endoplasmic reticulum membrane ; GO:0005789
Pfam:PF03347 TDH > GO:hemolysis by symbiont of host erythrocytes ; GO:0019836
Pfam:PF03347 TDH > GO:extracellular region ; GO:0005576
Pfam:PF03348 Serinc > GO:membrane ; GO:0016020
Pfam:PF03352 Adenine_glyco > GO:DNA-3-methyladenine glycosylase activity ; GO:0008725
Pfam:PF03352 Adenine_glyco > GO:base-excision repair ; GO:0006284
Pfam:PF03355 Pox_TAP > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF03357 Snf7 > GO:protein transport ; GO:0015031
Pfam:PF03358 FMN_red > GO:oxidoreductase activity ; GO:0016491
Pfam:PF03359 GKAP > GO:cell-cell signaling ; GO:0007267
Pfam:PF03360 Glyco_transf_43 > GO:galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity ; GO:0015018
Pfam:PF03360 Glyco_transf_43 > GO:membrane ; GO:0016020
Pfam:PF03361 Herpes_IE2_3 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF03362 Herpes_UL47 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF03366 YEATS > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF03366 YEATS > GO:nucleus ; GO:0005634
Pfam:PF03367 zf-ZPR1 > GO:zinc ion binding ; GO:0008270
Pfam:PF03368 Dicer_dimer > GO:endoribonuclease activity, producing 5'-phosphomonoesters ; GO:0016891
Pfam:PF03370 CBM_21 > GO:protein binding ; GO:0005515
Pfam:PF03373 Octapeptide > GO:immunoglobulin binding ; GO:0019865
Pfam:PF03374 ANT > GO:DNA binding ; GO:0003677
Pfam:PF03376 Adeno_E3B > GO:membrane ; GO:0016020
Pfam:PF03378 CAS_CSE1 > GO:protein binding ; GO:0005515
Pfam:PF03379 CcmB > GO:heme transporter activity ; GO:0015232
Pfam:PF03379 CcmB > GO:heme transport ; GO:0015886
Pfam:PF03379 CcmB > GO:cytochrome complex assembly ; GO:0017004
Pfam:PF03379 CcmB > GO:membrane ; GO:0016020
Pfam:PF03381 CDC50 > GO:membrane ; GO:0016020
Pfam:PF03387 Herpes_UL46 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF03388 Lectin_leg-like > GO:membrane ; GO:0016020
Pfam:PF03390 2HCT > GO:organic anion transmembrane transporter activity ; GO:0008514
Pfam:PF03390 2HCT > GO:organic anion transport ; GO:0015711
Pfam:PF03390 2HCT > GO:integral component of membrane ; GO:0016021
Pfam:PF03391 Nepo_coat > GO:structural molecule activity ; GO:0005198
Pfam:PF03391 Nepo_coat > GO:viral capsid ; GO:0019028
Pfam:PF03393 Pneumo_matrix > GO:virion assembly ; GO:0019068
Pfam:PF03393 Pneumo_matrix > GO:viral envelope ; GO:0019031
Pfam:PF03395 Pox_P4A > GO:structural molecule activity ; GO:0005198
Pfam:PF03395 Pox_P4A > GO:virion ; GO:0019012
Pfam:PF03396 Pox_RNA_pol_35 > GO:DNA binding ; GO:0003677
Pfam:PF03396 Pox_RNA_pol_35 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF03396 Pox_RNA_pol_35 > GO:viral transcription ; GO:0019083
Pfam:PF03400 DDE_Tnp_IS1 > GO:DNA binding ; GO:0003677
Pfam:PF03400 DDE_Tnp_IS1 > GO:transposase activity ; GO:0004803
Pfam:PF03400 DDE_Tnp_IS1 > GO:transposition, DNA-mediated ; GO:0006313
Pfam:PF03401 TctC > GO:outer membrane-bounded periplasmic space ; GO:0030288
Pfam:PF03402 V1R > GO:pheromone receptor activity ; GO:0016503
Pfam:PF03402 V1R > GO:G-protein coupled receptor signaling pathway ; GO:0007186
Pfam:PF03402 V1R > GO:integral component of membrane ; GO:0016021
Pfam:PF03403 PAF-AH_p_II > GO:1-alkyl-2-acetylglycerophosphocholine esterase activity ; GO:0003847
Pfam:PF03403 PAF-AH_p_II > GO:lipid catabolic process ; GO:0016042
Pfam:PF03404 Mo-co_dimer > GO:oxidoreductase activity ; GO:0016491
Pfam:PF03404 Mo-co_dimer > GO:molybdenum ion binding ; GO:0030151
Pfam:PF03404 Mo-co_dimer > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03405 FA_desaturase_2 > GO:acyl-[acyl-carrier-protein] desaturase activity ; GO:0045300
Pfam:PF03405 FA_desaturase_2 > GO:fatty acid metabolic process ; GO:0006631
Pfam:PF03405 FA_desaturase_2 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03408 Foamy_virus_ENV > GO:viral envelope ; GO:0019031
Pfam:PF03410 Peptidase_M44 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF03410 Peptidase_M44 > GO:zinc ion binding ; GO:0008270
Pfam:PF03410 Peptidase_M44 > GO:viral life cycle ; GO:0019058
Pfam:PF03411 Peptidase_M74 > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF03411 Peptidase_M74 > GO:proteolysis ; GO:0006508
Pfam:PF03411 Peptidase_M74 > GO:outer membrane-bounded periplasmic space ; GO:0030288
Pfam:PF03412 Peptidase_C39 > GO:ATP binding ; GO:0005524
Pfam:PF03412 Peptidase_C39 > GO:peptidase activity ; GO:0008233
Pfam:PF03412 Peptidase_C39 > GO:proteolysis ; GO:0006508
Pfam:PF03412 Peptidase_C39 > GO:integral component of membrane ; GO:0016021
Pfam:PF03414 Glyco_transf_6 > GO:transferase activity, transferring hexosyl groups ; GO:0016758
Pfam:PF03414 Glyco_transf_6 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF03414 Glyco_transf_6 > GO:membrane ; GO:0016020
Pfam:PF03418 Peptidase_A25 > GO:peptidase activity ; GO:0008233
Pfam:PF03418 Peptidase_A25 > GO:proteolysis ; GO:0006508
Pfam:PF03418 Peptidase_A25 > GO:spore germination ; GO:0009847
Pfam:PF03419 Peptidase_U4 > GO:aspartic-type endopeptidase activity ; GO:0004190
Pfam:PF03419 Peptidase_U4 > GO:proteolysis ; GO:0006508
Pfam:PF03419 Peptidase_U4 > GO:asexual sporulation ; GO:0030436
Pfam:PF03422 CBM_6 > GO:carbohydrate binding ; GO:0030246
Pfam:PF03423 CBM_25 > GO:starch binding ; GO:2001070
Pfam:PF03424 CBM_17_28 > GO:cellulase activity ; GO:0008810
Pfam:PF03424 CBM_17_28 > GO:cellulose catabolic process ; GO:0030245
Pfam:PF03425 CBM_11 > GO:cellulase activity ; GO:0008810
Pfam:PF03425 CBM_11 > GO:cellulose catabolic process ; GO:0030245
Pfam:PF03427 CBM_19 > GO:chitinase activity ; GO:0004568
Pfam:PF03427 CBM_19 > GO:chitin catabolic process ; GO:0006032
Pfam:PF03431 RNA_replicase_B > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF03431 RNA_replicase_B > GO:viral genome replication ; GO:0019079
Pfam:PF03435 Saccharop_dh > GO:oxidoreductase activity ; GO:0016491
Pfam:PF03435 Saccharop_dh > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03441 FAD_binding_7 > GO:DNA photolyase activity ; GO:0003913
Pfam:PF03441 FAD_binding_7 > GO:DNA repair ; GO:0006281
Pfam:PF03444 HrcA_DNA-bdg > GO:DNA binding ; GO:0003677
Pfam:PF03444 HrcA_DNA-bdg > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF03445 DUF294 > GO:[protein-PII] uridylyltransferase activity ; GO:0008773
Pfam:PF03446 NAD_binding_2 > GO:phosphogluconate dehydrogenase (decarboxylating) activity ; GO:0004616
Pfam:PF03446 NAD_binding_2 > GO:pentose-phosphate shunt ; GO:0006098
Pfam:PF03446 NAD_binding_2 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03447 NAD_binding_3 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF03447 NAD_binding_3 > GO:NADP binding ; GO:0050661
Pfam:PF03447 NAD_binding_3 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03449 GreA_GreB_N > GO:DNA binding ; GO:0003677
Pfam:PF03449 GreA_GreB_N > GO:regulation of DNA-templated transcription, elongation ; GO:0032784
Pfam:PF03453 MoeA_N > GO:molybdopterin cofactor biosynthetic process ; GO:0032324
Pfam:PF03454 MoeA_C > GO:molybdopterin cofactor biosynthetic process ; GO:0032324
Pfam:PF03459 TOBE > GO:transporter activity ; GO:0005215
Pfam:PF03459 TOBE > GO:ATP binding ; GO:0005524
Pfam:PF03459 TOBE > GO:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances ; GO:0016820
Pfam:PF03459 TOBE > GO:transport ; GO:0006810
Pfam:PF03459 TOBE > GO:ATP-binding cassette (ABC) transporter complex ; GO:0043190
Pfam:PF03460 NIR_SIR_ferr > GO:oxidoreductase activity ; GO:0016491
Pfam:PF03460 NIR_SIR_ferr > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03461 TRCF > GO:DNA repair ; GO:0006281
Pfam:PF03462 PCRF > GO:translation release factor activity, codon specific ; GO:0016149
Pfam:PF03462 PCRF > GO:translational termination ; GO:0006415
Pfam:PF03462 PCRF > GO:cytoplasm ; GO:0005737
Pfam:PF03468 XS > GO:gene silencing by RNA ; GO:0031047
Pfam:PF03470 zf-XS > GO:gene silencing by RNA ; GO:0031047
Pfam:PF03473 MOSC > GO:catalytic activity ; GO:0003824
Pfam:PF03473 MOSC > GO:molybdenum ion binding ; GO:0030151
Pfam:PF03473 MOSC > GO:pyridoxal phosphate binding ; GO:0030170
Pfam:PF03480 SBP_bac_7 > GO:transport ; GO:0006810
Pfam:PF03480 SBP_bac_7 > GO:outer membrane-bounded periplasmic space ; GO:0030288
Pfam:PF03483 B3_4 > GO:RNA binding ; GO:0003723
Pfam:PF03483 B3_4 > GO:phenylalanine-tRNA ligase activity ; GO:0004826
Pfam:PF03484 B5 > GO:magnesium ion binding ; GO:0000287
Pfam:PF03484 B5 > GO:RNA binding ; GO:0003723
Pfam:PF03484 B5 > GO:ATP binding ; GO:0005524
Pfam:PF03484 B5 > GO:phenylalanyl-tRNA aminoacylation ; GO:0006432
Pfam:PF03485 Arg_tRNA_synt_N > GO:nucleotide binding ; GO:0000166
Pfam:PF03485 Arg_tRNA_synt_N > GO:arginine-tRNA ligase activity ; GO:0004814
Pfam:PF03485 Arg_tRNA_synt_N > GO:ATP binding ; GO:0005524
Pfam:PF03485 Arg_tRNA_synt_N > GO:arginyl-tRNA aminoacylation ; GO:0006420
Pfam:PF03485 Arg_tRNA_synt_N > GO:cytoplasm ; GO:0005737
Pfam:PF03488 Ins_beta > GO:hormone activity ; GO:0005179
Pfam:PF03488 Ins_beta > GO:extracellular region ; GO:0005576
Pfam:PF03490 Varsurf_PPLC > GO:glycosylphosphatidylinositol diacylglycerol-lyase activity ; GO:0047396
Pfam:PF03490 Varsurf_PPLC > GO:glycerophospholipid metabolic process ; GO:0006650
Pfam:PF03491 5HT_transporter > GO:serotonin:sodium symporter activity ; GO:0005335
Pfam:PF03491 5HT_transporter > GO:neurotransmitter transport ; GO:0006836
Pfam:PF03491 5HT_transporter > GO:integral component of plasma membrane ; GO:0005887
Pfam:PF03492 Methyltransf_7 > GO:methyltransferase activity ; GO:0008168
Pfam:PF03493 BK_channel_a > GO:calcium-activated potassium channel activity ; GO:0015269
Pfam:PF03493 BK_channel_a > GO:potassium ion transport ; GO:0006813
Pfam:PF03493 BK_channel_a > GO:membrane ; GO:0016020
Pfam:PF03494 Beta-APP > GO:integral component of membrane ; GO:0016021
Pfam:PF03495 Binary_toxB > GO:pathogenesis ; GO:0009405
Pfam:PF03495 Binary_toxB > GO:extracellular region ; GO:0005576
Pfam:PF03496 ADPrib_exo_Tox > GO:pathogenesis ; GO:0009405
Pfam:PF03496 ADPrib_exo_Tox > GO:extracellular region ; GO:0005576
Pfam:PF03497 Anthrax_toxA > GO:calcium- and calmodulin-responsive adenylate cyclase activity ; GO:0008294
Pfam:PF03497 Anthrax_toxA > GO:pathogenesis ; GO:0009405
Pfam:PF03497 Anthrax_toxA > GO:extracellular region ; GO:0005576
Pfam:PF03498 CDtoxinA > GO:pathogenesis ; GO:0009405
Pfam:PF03502 Channel_Tsx > GO:cell outer membrane ; GO:0009279
Pfam:PF03503 Chlam_OMP3 > GO:extracellular matrix structural constituent ; GO:0005201
Pfam:PF03504 Chlam_OMP6 > GO:extracellular matrix structural constituent ; GO:0005201
Pfam:PF03505 Clenterotox > GO:pathogenesis ; GO:0009405
Pfam:PF03505 Clenterotox > GO:extracellular region ; GO:0005576
Pfam:PF03509 Connexin50 > GO:cell communication ; GO:0007154
Pfam:PF03509 Connexin50 > GO:connexon complex ; GO:0005922
Pfam:PF03510 Peptidase_C24 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF03510 Peptidase_C24 > GO:proteolysis ; GO:0006508
Pfam:PF03512 Glyco_hydro_52 > GO:xylan 1,4-beta-xylosidase activity ; GO:0009044
Pfam:PF03512 Glyco_hydro_52 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF03513 Cloacin_immun > GO:toxic substance binding ; GO:0015643
Pfam:PF03513 Cloacin_immun > GO:bacteriocin immunity ; GO:0030153
Pfam:PF03515 Cloacin > GO:pathogenesis ; GO:0009405
Pfam:PF03516 Filaggrin > GO:structural molecule activity ; GO:0005198
Pfam:PF03521 Kv2channel > GO:voltage-gated potassium channel activity ; GO:0005249
Pfam:PF03521 Kv2channel > GO:potassium ion transport ; GO:0006813
Pfam:PF03521 Kv2channel > GO:voltage-gated potassium channel complex ; GO:0008076
Pfam:PF03522 KCl_Cotrans_1 > GO:transporter activity ; GO:0005215
Pfam:PF03522 KCl_Cotrans_1 > GO:ion transport ; GO:0006811
Pfam:PF03522 KCl_Cotrans_1 > GO:membrane ; GO:0016020
Pfam:PF03523 Macscav_rec > GO:scavenger receptor activity ; GO:0005044
Pfam:PF03523 Macscav_rec > GO:receptor-mediated endocytosis ; GO:0006898
Pfam:PF03523 Macscav_rec > GO:membrane ; GO:0016020
Pfam:PF03525 Meiotic_rec114 > GO:reciprocal meiotic recombination ; GO:0007131
Pfam:PF03526 Microcin > GO:toxic substance binding ; GO:0015643
Pfam:PF03526 Microcin > GO:bacteriocin immunity ; GO:0030153
Pfam:PF03528 Rabaptin > GO:GTPase activator activity ; GO:0005096
Pfam:PF03528 Rabaptin > GO:growth factor activity ; GO:0008083
Pfam:PF03529 TF_Otx > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF03529 TF_Otx > GO:multicellular organismal development ; GO:0007275
Pfam:PF03529 TF_Otx > GO:nucleus ; GO:0005634
Pfam:PF03530 SK_channel > GO:small conductance calcium-activated potassium channel activity ; GO:0016286
Pfam:PF03530 SK_channel > GO:potassium ion transport ; GO:0006813
Pfam:PF03530 SK_channel > GO:integral component of membrane ; GO:0016021
Pfam:PF03533 SPO11_like > GO:DNA binding ; GO:0003677
Pfam:PF03533 SPO11_like > GO:reciprocal meiotic recombination ; GO:0007131
Pfam:PF03539 Spuma_A9PTase > GO:aspartic-type endopeptidase activity ; GO:0004190
Pfam:PF03539 Spuma_A9PTase > GO:proteolysis ; GO:0006508
Pfam:PF03540 TFIID_30kDa > GO:DNA-templated transcription, initiation ; GO:0006352
Pfam:PF03540 TFIID_30kDa > GO:nucleus ; GO:0005634
Pfam:PF03542 Tuberin > GO:GTPase activator activity ; GO:0005096
Pfam:PF03542 Tuberin > GO:positive regulation of GTPase activity ; GO:0043547
Pfam:PF03543 Peptidase_C58 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF03543 Peptidase_C58 > GO:pathogenesis ; GO:0009405
Pfam:PF03544 TonB_C > GO:transport ; GO:0006810
Pfam:PF03547 Mem_trans > GO:transmembrane transport ; GO:0055085
Pfam:PF03547 Mem_trans > GO:integral component of membrane ; GO:0016021
Pfam:PF03549 Tir_receptor_M > GO:protein binding ; GO:0005515
Pfam:PF03550 LolB > GO:protein transport ; GO:0015031
Pfam:PF03550 LolB > GO:cell outer membrane ; GO:0009279
Pfam:PF03552 Cellulose_synt > GO:cellulose synthase (UDP-forming) activity ; GO:0016760
Pfam:PF03552 Cellulose_synt > GO:cellulose biosynthetic process ; GO:0030244
Pfam:PF03552 Cellulose_synt > GO:membrane ; GO:0016020
Pfam:PF03553 Na_H_antiporter > GO:integral component of membrane ; GO:0016021
Pfam:PF03554 Herpes_UL73 > GO:viral envelope ; GO:0019031
Pfam:PF03557 Bunya_G1 > GO:modulation by virus of host morphology or physiology ; GO:0019048
Pfam:PF03558 TBSV_P22 > GO:viral capsid ; GO:0019028
Pfam:PF03561 Allantoicase > GO:allantoicase activity ; GO:0004037
Pfam:PF03561 Allantoicase > GO:allantoin catabolic process ; GO:0000256
Pfam:PF03562 MltA > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF03567 Sulfotransfer_2 > GO:sulfotransferase activity ; GO:0008146
Pfam:PF03567 Sulfotransfer_2 > GO:integral component of membrane ; GO:0016021
Pfam:PF03568 Peptidase_C50 > GO:peptidase activity ; GO:0008233
Pfam:PF03568 Peptidase_C50 > GO:proteolysis ; GO:0006508
Pfam:PF03568 Peptidase_C50 > GO:nucleus ; GO:0005634
Pfam:PF03572 Peptidase_S41 > GO:serine-type peptidase activity ; GO:0008236
Pfam:PF03572 Peptidase_S41 > GO:proteolysis ; GO:0006508
Pfam:PF03573 OprD > GO:porin activity ; GO:0015288
Pfam:PF03573 OprD > GO:transport ; GO:0006810
Pfam:PF03573 OprD > GO:integral component of membrane ; GO:0016021
Pfam:PF03574 Peptidase_S48 > GO:DNA binding ; GO:0003677
Pfam:PF03574 Peptidase_S48 > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF03574 Peptidase_S48 > GO:heterocyst differentiation ; GO:0043158
Pfam:PF03575 Peptidase_S51 > GO:serine-type peptidase activity ; GO:0008236
Pfam:PF03575 Peptidase_S51 > GO:proteolysis ; GO:0006508
Pfam:PF03577 Peptidase_C69 > GO:dipeptidase activity ; GO:0016805
Pfam:PF03577 Peptidase_C69 > GO:proteolysis ; GO:0006508
Pfam:PF03581 Herpes_UL33 > GO:viral DNA genome packaging ; GO:0019073
Pfam:PF03583 LIP > GO:triglyceride lipase activity ; GO:0004806
Pfam:PF03583 LIP > GO:lipid catabolic process ; GO:0016042
Pfam:PF03584 Herpes_ICP4_N > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF03584 Herpes_ICP4_N > GO:host cell nucleus ; GO:0042025
Pfam:PF03585 Herpes_ICP4_C > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF03585 Herpes_ICP4_C > GO:host cell nucleus ; GO:0042025
Pfam:PF03586 Herpes_UL36 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF03586 Herpes_UL36 > GO:omega peptidase activity ; GO:0008242
Pfam:PF03587 EMG1 > GO:methyltransferase activity ; GO:0008168
Pfam:PF03588 Leu_Phe_trans > GO:leucyltransferase activity ; GO:0008914
Pfam:PF03588 Leu_Phe_trans > GO:protein catabolic process ; GO:0030163
Pfam:PF03589 Antiterm > GO:DNA binding ; GO:0003677
Pfam:PF03589 Antiterm > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF03590 AsnA > GO:aspartate-ammonia ligase activity ; GO:0004071
Pfam:PF03590 AsnA > GO:asparagine biosynthetic process ; GO:0006529
Pfam:PF03590 AsnA > GO:cytoplasm ; GO:0005737
Pfam:PF03592 Terminase_2 > GO:DNA packaging ; GO:0006323
Pfam:PF03594 BenE > GO:benzoate transporter activity ; GO:0042925
Pfam:PF03594 BenE > GO:benzoate transport ; GO:0042919
Pfam:PF03594 BenE > GO:integral component of membrane ; GO:0016021
Pfam:PF03595 SLAC1 > GO:transmembrane transport ; GO:0055085
Pfam:PF03595 SLAC1 > GO:integral component of membrane ; GO:0016021
Pfam:PF03598 CdhC > GO:carbon-monoxide dehydrogenase (acceptor) activity ; GO:0018492
Pfam:PF03598 CdhC > GO:acetyl-CoA metabolic process ; GO:0006084
Pfam:PF03600 CitMHS > GO:transmembrane transport ; GO:0055085
Pfam:PF03600 CitMHS > GO:integral component of membrane ; GO:0016021
Pfam:PF03601 Cons_hypoth698 > GO:integral component of membrane ; GO:0016021
Pfam:PF03602 Cons_hypoth95 > GO:methyltransferase activity ; GO:0008168
Pfam:PF03602 Cons_hypoth95 > GO:rRNA methylation ; GO:0031167
Pfam:PF03603 DNA_III_psi > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF03603 DNA_III_psi > GO:3'-5' exonuclease activity ; GO:0008408
Pfam:PF03603 DNA_III_psi > GO:DNA replication ; GO:0006260
Pfam:PF03604 DNA_RNApol_7kD > GO:DNA binding ; GO:0003677
Pfam:PF03604 DNA_RNApol_7kD > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF03604 DNA_RNApol_7kD > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF03605 DcuA_DcuB > GO:C4-dicarboxylate transmembrane transporter activity ; GO:0015556
Pfam:PF03605 DcuA_DcuB > GO:C4-dicarboxylate transport ; GO:0015740
Pfam:PF03605 DcuA_DcuB > GO:integral component of membrane ; GO:0016021
Pfam:PF03606 DcuC > GO:integral component of membrane ; GO:0016021
Pfam:PF03607 DCX > GO:intracellular signal transduction ; GO:0035556
Pfam:PF03608 EII-GUT > GO:phosphoenolpyruvate-dependent sugar phosphotransferase system ; GO:0009401
Pfam:PF03608 EII-GUT > GO:integral component of membrane ; GO:0016021
Pfam:PF03609 EII-Sor > GO:phosphoenolpyruvate-dependent sugar phosphotransferase system ; GO:0009401
Pfam:PF03609 EII-Sor > GO:integral component of membrane ; GO:0016021
Pfam:PF03610 EIIA-man > GO:phosphoenolpyruvate-dependent sugar phosphotransferase system ; GO:0009401
Pfam:PF03610 EIIA-man > GO:integral component of membrane ; GO:0016021
Pfam:PF03611 EIIC-GAT > GO:phosphoenolpyruvate-dependent sugar phosphotransferase system ; GO:0009401
Pfam:PF03611 EIIC-GAT > GO:integral component of membrane ; GO:0016021
Pfam:PF03612 EIIBC-GUT_N > GO:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity ; GO:0008982
Pfam:PF03612 EIIBC-GUT_N > GO:phosphoenolpyruvate-dependent sugar phosphotransferase system ; GO:0009401
Pfam:PF03612 EIIBC-GUT_N > GO:integral component of membrane ; GO:0016021
Pfam:PF03613 EIID-AGA > GO:phosphoenolpyruvate-dependent sugar phosphotransferase system ; GO:0009401
Pfam:PF03613 EIID-AGA > GO:integral component of membrane ; GO:0016021
Pfam:PF03614 Flag1_repress > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF03614 Flag1_repress > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF03615 GCM > GO:DNA binding ; GO:0003677
Pfam:PF03615 GCM > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF03616 Glt_symporter > GO:glutamate:sodium symporter activity ; GO:0015501
Pfam:PF03616 Glt_symporter > GO:L-glutamate transport ; GO:0015813
Pfam:PF03616 Glt_symporter > GO:integral component of membrane ; GO:0016021
Pfam:PF03618 Kinase-PPPase > GO:ATP binding ; GO:0005524
Pfam:PF03618 Kinase-PPPase > GO:transferase activity, transferring phosphorus-containing groups ; GO:0016772
Pfam:PF03623 Focal_AT > GO:protein tyrosine kinase activity ; GO:0004713
Pfam:PF03623 Focal_AT > GO:signal transducer activity ; GO:0004871
Pfam:PF03623 Focal_AT > GO:protein phosphorylation ; GO:0006468
Pfam:PF03623 Focal_AT > GO:signal complex assembly ; GO:0007172
Pfam:PF03623 Focal_AT > GO:focal adhesion ; GO:0005925
Pfam:PF03626 COX4_pro > GO:integral component of membrane ; GO:0016021
Pfam:PF03627 PapG_N > GO:carbohydrate binding ; GO:0030246
Pfam:PF03627 PapG_N > GO:cell adhesion ; GO:0007155
Pfam:PF03630 Fumble > GO:pantothenate kinase activity ; GO:0004594
Pfam:PF03630 Fumble > GO:ATP binding ; GO:0005524
Pfam:PF03630 Fumble > GO:coenzyme A biosynthetic process ; GO:0015937
Pfam:PF03632 Glyco_hydro_65m > GO:catalytic activity ; GO:0003824
Pfam:PF03632 Glyco_hydro_65m > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF03635 Vps35 > GO:protein transport ; GO:0015031
Pfam:PF03635 Vps35 > GO:retrograde transport, endosome to Golgi ; GO:0042147
Pfam:PF03635 Vps35 > GO:retromer complex ; GO:0030904
Pfam:PF03636 Glyco_hydro_65N > GO:catalytic activity ; GO:0003824
Pfam:PF03636 Glyco_hydro_65N > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF03639 Glyco_hydro_81 > GO:glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group ; GO:0052861
Pfam:PF03639 Glyco_hydro_81 > GO:glucan endo-1,4-beta-glucanase activity, C-3 substituted reducing group ; GO:0052862
Pfam:PF03639 Glyco_hydro_81 > GO:cell wall macromolecule catabolic process ; GO:0016998
Pfam:PF03644 Glyco_hydro_85 > GO:mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity ; GO:0033925
Pfam:PF03644 Glyco_hydro_85 > GO:cytoplasm ; GO:0005737
Pfam:PF03647 Tmemb_14 > GO:membrane ; GO:0016020
Pfam:PF03648 Glyco_hydro_67N > GO:alpha-glucuronidase activity ; GO:0046559
Pfam:PF03648 Glyco_hydro_67N > GO:xylan catabolic process ; GO:0045493
Pfam:PF03650 MPC > GO:mitochondrial pyruvate transport ; GO:0006850
Pfam:PF03650 MPC > GO:mitochondrial inner membrane ; GO:0005743
Pfam:PF03652 UPF0081 > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF03652 UPF0081 > GO:DNA repair ; GO:0006281
Pfam:PF03652 UPF0081 > GO:DNA recombination ; GO:0006310
Pfam:PF03652 UPF0081 > GO:cellular response to DNA damage stimulus ; GO:0006974
Pfam:PF03652 UPF0081 > GO:cytoplasm ; GO:0005737
Pfam:PF03661 UPF0121 > GO:integral component of membrane ; GO:0016021
Pfam:PF03662 Glyco_hydro_79n > GO:hydrolase activity, acting on glycosyl bonds ; GO:0016798
Pfam:PF03662 Glyco_hydro_79n > GO:membrane ; GO:0016020
Pfam:PF03664 Glyco_hydro_62 > GO:alpha-L-arabinofuranosidase activity ; GO:0046556
Pfam:PF03664 Glyco_hydro_62 > GO:L-arabinose metabolic process ; GO:0046373
Pfam:PF03668 ATP_bind_2 > GO:ATP binding ; GO:0005524
Pfam:PF03678 Adeno_hexon_C > GO:structural molecule activity ; GO:0005198
Pfam:PF03678 Adeno_hexon_C > GO:viral capsid ; GO:0019028
Pfam:PF03688 Nepo_coat_C > GO:viral capsid ; GO:0019028
Pfam:PF03689 Nepo_coat_N > GO:viral capsid ; GO:0019028
Pfam:PF03694 Erg28 > GO:integral component of membrane ; GO:0016021
Pfam:PF03699 UPF0182 > GO:integral component of membrane ; GO:0016021
Pfam:PF03700 Sorting_nexin > GO:intracellular protein transport ; GO:0006886
Pfam:PF03702 UPF0075 > GO:ATP binding ; GO:0005524
Pfam:PF03702 UPF0075 > GO:phosphotransferase activity, alcohol group as acceptor ; GO:0016773
Pfam:PF03702 UPF0075 > GO:amino sugar metabolic process ; GO:0006040
Pfam:PF03702 UPF0075 > GO:peptidoglycan turnover ; GO:0009254
Pfam:PF03708 Avian_gp85 > GO:viral envelope ; GO:0019031
Pfam:PF03709 OKR_DC_1_N > GO:carboxy-lyase activity ; GO:0016831
Pfam:PF03710 GlnE > GO:[glutamate-ammonia-ligase] adenylyltransferase activity ; GO:0008882
Pfam:PF03711 OKR_DC_1_C > GO:catalytic activity ; GO:0003824
Pfam:PF03714 PUD > GO:carbohydrate binding ; GO:0030246
Pfam:PF03714 PUD > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF03717 PBP_dimer > GO:penicillin binding ; GO:0008658
Pfam:PF03718 Glyco_hydro_49 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF03719 Ribosomal_S5_C > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF03719 Ribosomal_S5_C > GO:translation ; GO:0006412
Pfam:PF03719 Ribosomal_S5_C > GO:ribosome ; GO:0005840
Pfam:PF03720 UDPG_MGDP_dh_C > GO:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ; GO:0016616
Pfam:PF03720 UDPG_MGDP_dh_C > GO:NAD binding ; GO:0051287
Pfam:PF03720 UDPG_MGDP_dh_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03721 UDPG_MGDP_dh_N > GO:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ; GO:0016616
Pfam:PF03721 UDPG_MGDP_dh_N > GO:NAD binding ; GO:0051287
Pfam:PF03721 UDPG_MGDP_dh_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03726 PNPase > GO:3'-5'-exoribonuclease activity ; GO:0000175
Pfam:PF03726 PNPase > GO:RNA binding ; GO:0003723
Pfam:PF03726 PNPase > GO:RNA processing ; GO:0006396
Pfam:PF03727 Hexokinase_2 > GO:ATP binding ; GO:0005524
Pfam:PF03727 Hexokinase_2 > GO:phosphotransferase activity, alcohol group as acceptor ; GO:0016773
Pfam:PF03727 Hexokinase_2 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF03728 Viral_DNA_Zn_bi > GO:DNA binding ; GO:0003677
Pfam:PF03728 Viral_DNA_Zn_bi > GO:zinc ion binding ; GO:0008270
Pfam:PF03728 Viral_DNA_Zn_bi > GO:DNA replication ; GO:0006260
Pfam:PF03730 Ku_C > GO:DNA binding ; GO:0003677
Pfam:PF03730 Ku_C > GO:ATP-dependent DNA helicase activity ; GO:0004003
Pfam:PF03730 Ku_C > GO:double-strand break repair via nonhomologous end joining ; GO:0006303
Pfam:PF03734 YkuD > GO:transferase activity ; GO:0016740
Pfam:PF03739 YjgP_YjgQ > GO:integral component of membrane ; GO:0016021
Pfam:PF03740 PdxJ > GO:pyridoxine 5'-phosphate synthase activity ; GO:0033856
Pfam:PF03740 PdxJ > GO:pyridoxine biosynthetic process ; GO:0008615
Pfam:PF03740 PdxJ > GO:cytoplasm ; GO:0005737
Pfam:PF03741 TerC > GO:integral component of membrane ; GO:0016021
Pfam:PF03742 PetN > GO:electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity ; GO:0045158
Pfam:PF03742 PetN > GO:cytochrome complex assembly ; GO:0017004
Pfam:PF03742 PetN > GO:cytochrome b6f complex ; GO:0009512
Pfam:PF03744 BioW > GO:ATP binding ; GO:0005524
Pfam:PF03744 BioW > GO:6-carboxyhexanoate-CoA ligase activity ; GO:0042410
Pfam:PF03744 BioW > GO:biotin biosynthetic process ; GO:0009102
Pfam:PF03748 FliL > GO:chemotaxis ; GO:0006935
Pfam:PF03748 FliL > GO:bacterial-type flagellum-dependent cell motility ; GO:0071973
Pfam:PF03748 FliL > GO:bacterial-type flagellum basal body ; GO:0009425
Pfam:PF03759 PRONE > GO:Rho guanyl-nucleotide exchange factor activity ; GO:0005089
Pfam:PF03760 LEA_1 > GO:embryo development ; GO:0009790
Pfam:PF03764 EFG_IV > GO:GTP binding ; GO:0005525
Pfam:PF03767 Acid_phosphat_B > GO:acid phosphatase activity ; GO:0003993
Pfam:PF03768 Attacin_N > GO:extracellular region ; GO:0005576
Pfam:PF03769 Attacin_C > GO:extracellular region ; GO:0005576
Pfam:PF03770 IPK > GO:inositol-1,4,5-trisphosphate 3-kinase activity ; GO:0008440
Pfam:PF03775 MinC_C > GO:cell morphogenesis ; GO:0000902
Pfam:PF03776 MinE > GO:regulation of barrier septum assembly ; GO:0032955
Pfam:PF03776 MinE > GO:cell division ; GO:0051301
Pfam:PF03783 CsgG > GO:outer membrane-bounded periplasmic space ; GO:0030288
Pfam:PF03784 Cyclotide > GO:defense response ; GO:0006952
Pfam:PF03785 Peptidase_C25_C > GO:peptidase activity ; GO:0008233
Pfam:PF03785 Peptidase_C25_C > GO:proteolysis ; GO:0006508
Pfam:PF03786 UxuA > GO:mannonate dehydratase activity ; GO:0008927
Pfam:PF03786 UxuA > GO:glucuronate catabolic process ; GO:0006064
Pfam:PF03788 LrgA > GO:integral component of membrane ; GO:0016021
Pfam:PF03789 ELK > GO:DNA binding ; GO:0003677
Pfam:PF03789 ELK > GO:nucleus ; GO:0005634
Pfam:PF03790 KNOX1 > GO:DNA binding ; GO:0003677
Pfam:PF03790 KNOX1 > GO:nucleus ; GO:0005634
Pfam:PF03791 KNOX2 > GO:DNA binding ; GO:0003677
Pfam:PF03791 KNOX2 > GO:nucleus ; GO:0005634
Pfam:PF03792 PBC > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF03792 PBC > GO:nucleus ; GO:0005634
Pfam:PF03793 PASTA > GO:penicillin binding ; GO:0008658
Pfam:PF03796 DnaB_C > GO:DNA helicase activity ; GO:0003678
Pfam:PF03796 DnaB_C > GO:ATP binding ; GO:0005524
Pfam:PF03796 DnaB_C > GO:DNA replication ; GO:0006260
Pfam:PF03798 TRAM_LAG1_CLN8 > GO:integral component of membrane ; GO:0016021
Pfam:PF03800 Nuf2 > GO:mitotic nuclear division ; GO:0007067
Pfam:PF03800 Nuf2 > GO:chromosome, centromeric region ; GO:0000775
Pfam:PF03802 CitX > GO:prosthetic group biosynthetic process ; GO:0051191
Pfam:PF03806 ABG_transport > GO:p-aminobenzoyl-glutamate uptake transmembrane transporter activity ; GO:0015558
Pfam:PF03806 ABG_transport > GO:p-aminobenzoyl-glutamate transmembrane transport ; GO:1902604
Pfam:PF03808 Glyco_tran_WecB > GO:biosynthetic process ; GO:0009058
Pfam:PF03810 IBN_N > GO:Ran GTPase binding ; GO:0008536
Pfam:PF03810 IBN_N > GO:intracellular protein transport ; GO:0006886
Pfam:PF03811 Zn_Tnp_IS1 > GO:transposition, DNA-mediated ; GO:0006313
Pfam:PF03812 KdgT > GO:2-keto-3-deoxygluconate:proton symporter activity ; GO:0015649
Pfam:PF03812 KdgT > GO:carbohydrate transport ; GO:0008643
Pfam:PF03812 KdgT > GO:2-keto-3-deoxygluconate transport ; GO:0046411
Pfam:PF03812 KdgT > GO:integral component of membrane ; GO:0016021
Pfam:PF03814 KdpA > GO:potassium-transporting ATPase activity ; GO:0008556
Pfam:PF03814 KdpA > GO:potassium ion transport ; GO:0006813
Pfam:PF03814 KdpA > GO:plasma membrane ; GO:0005886
Pfam:PF03817 MadL > GO:membrane ; GO:0016020
Pfam:PF03820 Mtc > GO:cation transmembrane transporter activity ; GO:0008324
Pfam:PF03820 Mtc > GO:cation transport ; GO:0006812
Pfam:PF03820 Mtc > GO:transmembrane transport ; GO:0055085
Pfam:PF03820 Mtc > GO:membrane ; GO:0016020
Pfam:PF03821 Mtp > GO:integral component of membrane ; GO:0016021
Pfam:PF03822 NAF > GO:signal transduction ; GO:0007165
Pfam:PF03823 Neurokinin_B > GO:tachykinin receptor signaling pathway ; GO:0007217
Pfam:PF03824 NicO > GO:nickel cation transmembrane transporter activity ; GO:0015099
Pfam:PF03824 NicO > GO:metal ion binding ; GO:0046872
Pfam:PF03824 NicO > GO:nickel cation transmembrane transport ; GO:0035444
Pfam:PF03824 NicO > GO:integral component of membrane ; GO:0016021
Pfam:PF03827 Orexin_rec2 > GO:orexin receptor activity ; GO:0016499
Pfam:PF03827 Orexin_rec2 > GO:G-protein coupled receptor signaling pathway ; GO:0007186
Pfam:PF03827 Orexin_rec2 > GO:feeding behavior ; GO:0007631
Pfam:PF03827 Orexin_rec2 > GO:circadian sleep/wake cycle process ; GO:0022410
Pfam:PF03827 Orexin_rec2 > GO:integral component of membrane ; GO:0016021
Pfam:PF03829 PTSIIA_gutA > GO:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity ; GO:0008982
Pfam:PF03829 PTSIIA_gutA > GO:phosphoenolpyruvate-dependent sugar phosphotransferase system ; GO:0009401
Pfam:PF03829 PTSIIA_gutA > GO:cytoplasm ; GO:0005737
Pfam:PF03830 PTSIIB_sorb > GO:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity ; GO:0008982
Pfam:PF03830 PTSIIB_sorb > GO:phosphoenolpyruvate-dependent sugar phosphotransferase system ; GO:0009401
Pfam:PF03830 PTSIIB_sorb > GO:cytoplasm ; GO:0005737
Pfam:PF03832 WSK > GO:protein targeting ; GO:0006605
Pfam:PF03832 WSK > GO:signal transduction ; GO:0007165
Pfam:PF03834 Rad10 > GO:damaged DNA binding ; GO:0003684
Pfam:PF03834 Rad10 > GO:endonuclease activity ; GO:0004519
Pfam:PF03834 Rad10 > GO:DNA repair ; GO:0006281
Pfam:PF03834 Rad10 > GO:nucleus ; GO:0005634
Pfam:PF03835 Rad4 > GO:damaged DNA binding ; GO:0003684
Pfam:PF03835 Rad4 > GO:nucleotide-excision repair ; GO:0006289
Pfam:PF03835 Rad4 > GO:nucleus ; GO:0005634
Pfam:PF03836 RasGAP_C > GO:Ras GTPase activator activity ; GO:0005099
Pfam:PF03836 RasGAP_C > GO:small GTPase mediated signal transduction ; GO:0007264
Pfam:PF03836 RasGAP_C > GO:intracellular ; GO:0005622
Pfam:PF03837 RecT > GO:DNA binding ; GO:0003677
Pfam:PF03837 RecT > GO:DNA metabolic process ; GO:0006259
Pfam:PF03838 RecU > GO:DNA repair ; GO:0006281
Pfam:PF03838 RecU > GO:DNA recombination ; GO:0006310
Pfam:PF03838 RecU > GO:cytoplasm ; GO:0005737
Pfam:PF03839 Sec62 > GO:protein transporter activity ; GO:0008565
Pfam:PF03839 Sec62 > GO:protein transport ; GO:0015031
Pfam:PF03839 Sec62 > GO:integral component of membrane ; GO:0016021
Pfam:PF03840 SecG > GO:P-P-bond-hydrolysis-driven protein transmembrane transporter activity ; GO:0015450
Pfam:PF03840 SecG > GO:protein secretion ; GO:0009306
Pfam:PF03840 SecG > GO:integral component of membrane ; GO:0016021
Pfam:PF03842 Silic_transp > GO:silicate transport ; GO:0015708
Pfam:PF03843 Slp > GO:outer membrane ; GO:0019867
Pfam:PF03845 Spore_permease > GO:spore germination ; GO:0009847
Pfam:PF03845 Spore_permease > GO:integral component of membrane ; GO:0016021
Pfam:PF03846 SulA > GO:SOS response ; GO:0009432
Pfam:PF03846 SulA > GO:negative regulation of cell division ; GO:0051782
Pfam:PF03846 SulA > GO:Gram-negative-bacterium-type cell wall ; GO:0009276
Pfam:PF03847 TFIID_20kDa > GO:DNA-templated transcription, initiation ; GO:0006352
Pfam:PF03847 TFIID_20kDa > GO:transcription factor TFIID complex ; GO:0005669
Pfam:PF03849 Tfb2 > GO:ATP-dependent DNA helicase activity ; GO:0004003
Pfam:PF03849 Tfb2 > GO:nucleotide-excision repair ; GO:0006289
Pfam:PF03849 Tfb2 > GO:core TFIIH complex ; GO:0000439
Pfam:PF03849 Tfb2 > GO:nucleus ; GO:0005634
Pfam:PF03850 Tfb4 > GO:nucleotide-excision repair ; GO:0006289
Pfam:PF03850 Tfb4 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF03850 Tfb4 > GO:core TFIIH complex ; GO:0000439
Pfam:PF03851 UvdE > GO:endonuclease activity ; GO:0004519
Pfam:PF03851 UvdE > GO:nucleotide-excision repair ; GO:0006289
Pfam:PF03851 UvdE > GO:response to UV ; GO:0009411
Pfam:PF03852 Vsr > GO:endonuclease activity ; GO:0004519
Pfam:PF03852 Vsr > GO:mismatch repair ; GO:0006298
Pfam:PF03854 zf-P11 > GO:RNA binding ; GO:0003723
Pfam:PF03854 zf-P11 > GO:zinc ion binding ; GO:0008270
Pfam:PF03857 Colicin_im > GO:toxic substance binding ; GO:0015643
Pfam:PF03857 Colicin_im > GO:bacteriocin immunity ; GO:0030153
Pfam:PF03859 CG-1 > GO:DNA binding ; GO:0003677
Pfam:PF03859 CG-1 > GO:nucleus ; GO:0005634
Pfam:PF03861 ANTAR > GO:RNA binding ; GO:0003723
Pfam:PF03863 Phage_mat-A > GO:viral entry into host cell ; GO:0046718
Pfam:PF03868 Ribosomal_L6e_N > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF03868 Ribosomal_L6e_N > GO:translation ; GO:0006412
Pfam:PF03868 Ribosomal_L6e_N > GO:intracellular ; GO:0005622
Pfam:PF03868 Ribosomal_L6e_N > GO:ribosome ; GO:0005840
Pfam:PF03869 Arc > GO:DNA binding ; GO:0003677
Pfam:PF03870 RNA_pol_Rpb8 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF03871 RNA_pol_Rpb5_N > GO:DNA binding ; GO:0003677
Pfam:PF03871 RNA_pol_Rpb5_N > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF03871 RNA_pol_Rpb5_N > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF03871 RNA_pol_Rpb5_N > GO:nucleus ; GO:0005634
Pfam:PF03872 RseA_N > GO:sigma factor antagonist activity ; GO:0016989
Pfam:PF03874 RNA_pol_Rpb4 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF03874 RNA_pol_Rpb4 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF03876 SHS2_Rpb7-N > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF03876 SHS2_Rpb7-N > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF03882 KicB > GO:calcium ion binding ; GO:0005509
Pfam:PF03882 KicB > GO:DNA replication ; GO:0006260
Pfam:PF03882 KicB > GO:chromosome segregation ; GO:0007059
Pfam:PF03882 KicB > GO:cytoplasm ; GO:0005737
Pfam:PF03884 DUF329 > GO:zinc ion binding ; GO:0008270
Pfam:PF03893 Lipase3_N > GO:lipid catabolic process ; GO:0016042
Pfam:PF03894 XFP > GO:aldehyde-lyase activity ; GO:0016832
Pfam:PF03894 XFP > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF03896 TRAP_alpha > GO:endoplasmic reticulum membrane ; GO:0005789
Pfam:PF03898 TNV_CP > GO:viral capsid ; GO:0019028
Pfam:PF03900 Porphobil_deamC > GO:hydroxymethylbilane synthase activity ; GO:0004418
Pfam:PF03900 Porphobil_deamC > GO:tetrapyrrole biosynthetic process ; GO:0033014
Pfam:PF03901 Glyco_transf_22 > GO:transferase activity, transferring glycosyl groups ; GO:0016757
Pfam:PF03910 Adeno_PV > GO:virion ; GO:0019012
Pfam:PF03912 Psb28 > GO:photosynthesis ; GO:0015979
Pfam:PF03912 Psb28 > GO:photosystem II ; GO:0009523
Pfam:PF03912 Psb28 > GO:photosystem II oxygen evolving complex ; GO:0009654
Pfam:PF03912 Psb28 > GO:membrane ; GO:0016020
Pfam:PF03917 GSH_synth_ATP > GO:glutathione synthase activity ; GO:0004363
Pfam:PF03917 GSH_synth_ATP > GO:ATP binding ; GO:0005524
Pfam:PF03917 GSH_synth_ATP > GO:glutathione biosynthetic process ; GO:0006750
Pfam:PF03919 mRNA_cap_C > GO:mRNA guanylyltransferase activity ; GO:0004484
Pfam:PF03920 TLE_N > GO:protein binding ; GO:0005515
Pfam:PF03922 OmpW > GO:outer membrane ; GO:0019867
Pfam:PF03925 SeqA > GO:DNA binding ; GO:0003677
Pfam:PF03925 SeqA > GO:negative regulation of DNA-dependent DNA replication initiation ; GO:0032297
Pfam:PF03931 Skp1_POZ > GO:ubiquitin-dependent protein catabolic process ; GO:0006511
Pfam:PF03932 CutC > GO:copper ion binding ; GO:0005507
Pfam:PF03932 CutC > GO:copper ion homeostasis ; GO:0055070
Pfam:PF03934 T2SK > GO:protein secretion ; GO:0009306
Pfam:PF03934 T2SK > GO:integral component of membrane ; GO:0016021
Pfam:PF03936 Terpene_synth_C > GO:magnesium ion binding ; GO:0000287
Pfam:PF03936 Terpene_synth_C > GO:terpene synthase activity ; GO:0010333
Pfam:PF03936 Terpene_synth_C > GO:lyase activity ; GO:0016829
Pfam:PF03938 OmpH > GO:unfolded protein binding ; GO:0051082
Pfam:PF03943 TAP_C > GO:mRNA transport ; GO:0051028
Pfam:PF03943 TAP_C > GO:nucleus ; GO:0005634
Pfam:PF03945 Endotoxin_N > GO:pathogenesis ; GO:0009405
Pfam:PF03947 Ribosomal_L2_C > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF03947 Ribosomal_L2_C > GO:translation ; GO:0006412
Pfam:PF03947 Ribosomal_L2_C > GO:ribosome ; GO:0005840
Pfam:PF03949 Malic_M > GO:malate dehydrogenase (decarboxylating) (NAD+) activity ; GO:0004471
Pfam:PF03949 Malic_M > GO:NAD binding ; GO:0051287
Pfam:PF03949 Malic_M > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03950 tRNA-synt_1c_C > GO:nucleotide binding ; GO:0000166
Pfam:PF03950 tRNA-synt_1c_C > GO:aminoacyl-tRNA ligase activity ; GO:0004812
Pfam:PF03950 tRNA-synt_1c_C > GO:ATP binding ; GO:0005524
Pfam:PF03950 tRNA-synt_1c_C > GO:tRNA aminoacylation for protein translation ; GO:0006418
Pfam:PF03950 tRNA-synt_1c_C > GO:cytoplasm ; GO:0005737
Pfam:PF03951 Gln-synt_N > GO:glutamate-ammonia ligase activity ; GO:0004356
Pfam:PF03951 Gln-synt_N > GO:glutamine biosynthetic process ; GO:0006542
Pfam:PF03951 Gln-synt_N > GO:nitrogen compound metabolic process ; GO:0006807
Pfam:PF03952 Enolase_N > GO:magnesium ion binding ; GO:0000287
Pfam:PF03952 Enolase_N > GO:phosphopyruvate hydratase activity ; GO:0004634
Pfam:PF03952 Enolase_N > GO:glycolytic process ; GO:0006096
Pfam:PF03952 Enolase_N > GO:phosphopyruvate hydratase complex ; GO:0000015
Pfam:PF03953 Tubulin_C > GO:GTPase activity ; GO:0003924
Pfam:PF03953 Tubulin_C > GO:GTP binding ; GO:0005525
Pfam:PF03953 Tubulin_C > GO:GTP catabolic process ; GO:0006184
Pfam:PF03953 Tubulin_C > GO:protein polymerization ; GO:0051258
Pfam:PF03953 Tubulin_C > GO:protein complex ; GO:0043234
Pfam:PF03955 Adeno_PIX > GO:hexon binding ; GO:0031423
Pfam:PF03955 Adeno_PIX > GO:virion ; GO:0019012
Pfam:PF03964 Chorion_2 > GO:multicellular organismal development ; GO:0007275
Pfam:PF03964 Chorion_2 > GO:chorion ; GO:0042600
Pfam:PF03965 Penicillinase_R > GO:DNA binding ; GO:0003677
Pfam:PF03965 Penicillinase_R > GO:negative regulation of transcription, DNA-templated ; GO:0045892
Pfam:PF03967 PRCH > GO:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ; GO:0045156
Pfam:PF03967 PRCH > GO:photosynthesis, light reaction ; GO:0019684
Pfam:PF03967 PRCH > GO:plasma membrane light-harvesting complex ; GO:0030077
Pfam:PF03969 AFG1_ATPase > GO:ATP binding ; GO:0005524
Pfam:PF03970 Herpes_UL37_1 > GO:virion assembly ; GO:0019068
Pfam:PF03971 IDH > GO:isocitrate dehydrogenase (NADP+) activity ; GO:0004450
Pfam:PF03971 IDH > GO:tricarboxylic acid cycle ; GO:0006099
Pfam:PF03971 IDH > GO:oxidation-reduction process ; GO:0055114
Pfam:PF03972 MmgE_PrpD > GO:2-methylcitrate dehydratase activity ; GO:0047547
Pfam:PF03972 MmgE_PrpD > GO:propionate catabolic process ; GO:0019543
Pfam:PF03973 Triabin > GO:evasion or tolerance of host defense response ; GO:0030682
Pfam:PF03975 CheD > GO:protein-glutamine glutaminase activity ; GO:0050568
Pfam:PF03975 CheD > GO:chemotaxis ; GO:0006935
Pfam:PF03977 OAD_beta > GO:lyase activity ; GO:0016829
Pfam:PF03977 OAD_beta > GO:sodium ion transport ; GO:0006814
Pfam:PF03979 Sigma70_r1_1 > GO:DNA binding ; GO:0003677
Pfam:PF03979 Sigma70_r1_1 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF03982 DAGAT > GO:transferase activity, transferring acyl groups other than amino-acyl groups ; GO:0016747
Pfam:PF03983 SHD1 > GO:cytoskeletal protein binding ; GO:0008092
Pfam:PF03983 SHD1 > GO:protein binding, bridging ; GO:0030674
Pfam:PF03983 SHD1 > GO:identical protein binding ; GO:0042802
Pfam:PF03983 SHD1 > GO:ubiquitin binding ; GO:0043130
Pfam:PF03989 DNA_gyraseA_C > GO:DNA binding ; GO:0003677
Pfam:PF03989 DNA_gyraseA_C > GO:DNA topoisomerase activity ; GO:0003916
Pfam:PF03989 DNA_gyraseA_C > GO:ATP binding ; GO:0005524
Pfam:PF03989 DNA_gyraseA_C > GO:DNA topological change ; GO:0006265
Pfam:PF03989 DNA_gyraseA_C > GO:chromosome ; GO:0005694
Pfam:PF03996 Hema_esterase > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF03996 Hema_esterase > GO:host cell surface receptor binding ; GO:0046789
Pfam:PF03996 Hema_esterase > GO:fusion of virus membrane with host plasma membrane ; GO:0019064
Pfam:PF03996 Hema_esterase > GO:viral envelope ; GO:0019031
Pfam:PF03998 Utp11 > GO:rRNA processing ; GO:0006364
Pfam:PF03998 Utp11 > GO:small-subunit processome ; GO:0032040
Pfam:PF03999 MAP65_ASE1 > GO:microtubule binding ; GO:0008017
Pfam:PF03999 MAP65_ASE1 > GO:microtubule cytoskeleton organization ; GO:0000226
Pfam:PF03999 MAP65_ASE1 > GO:cytokinesis ; GO:0000910
Pfam:PF04005 Hus1 > GO:DNA damage checkpoint ; GO:0000077
Pfam:PF04005 Hus1 > GO:DNA repair ; GO:0006281
Pfam:PF04005 Hus1 > GO:checkpoint clamp complex ; GO:0030896
Pfam:PF04013 Methyltrn_RNA_2 > GO:tRNA methyltransferase activity ; GO:0008175
Pfam:PF04023 FeoA > GO:transition metal ion binding ; GO:0046914
Pfam:PF04026 SpoVG > GO:sporulation resulting in formation of a cellular spore ; GO:0030435
Pfam:PF04029 2-ph_phosp > GO:magnesium ion binding ; GO:0000287
Pfam:PF04029 2-ph_phosp > GO:2-phosphosulfolactate phosphatase activity ; GO:0050532
Pfam:PF04030 ALO > GO:D-arabinono-1,4-lactone oxidase activity ; GO:0003885
Pfam:PF04030 ALO > GO:oxidation-reduction process ; GO:0055114
Pfam:PF04030 ALO > GO:membrane ; GO:0016020
Pfam:PF04037 DUF382 > GO:nucleus ; GO:0005634
Pfam:PF04042 DNA_pol_E_B > GO:DNA binding ; GO:0003677
Pfam:PF04042 DNA_pol_E_B > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF04042 DNA_pol_E_B > GO:DNA replication ; GO:0006260
Pfam:PF04043 PMEI > GO:enzyme inhibitor activity ; GO:0004857
Pfam:PF04043 PMEI > GO:pectinesterase activity ; GO:0030599
Pfam:PF04045 P34-Arc > GO:regulation of actin filament polymerization ; GO:0030833
Pfam:PF04045 P34-Arc > GO:cytoskeleton ; GO:0005856
Pfam:PF04048 Sec8_exocyst > GO:vesicle docking involved in exocytosis ; GO:0006904
Pfam:PF04048 Sec8_exocyst > GO:protein transport ; GO:0015031
Pfam:PF04048 Sec8_exocyst > GO:exocyst ; GO:0000145
Pfam:PF04049 APC8 > GO:regulation of mitotic metaphase/anaphase transition ; GO:0030071
Pfam:PF04049 APC8 > GO:anaphase-promoting complex ; GO:0005680
Pfam:PF04052 TolB_N > GO:protein transport ; GO:0015031
Pfam:PF04052 TolB_N > GO:periplasmic space ; GO:0042597
Pfam:PF04053 Coatomer_WDAD > GO:structural molecule activity ; GO:0005198
Pfam:PF04053 Coatomer_WDAD > GO:intracellular protein transport ; GO:0006886
Pfam:PF04053 Coatomer_WDAD > GO:vesicle-mediated transport ; GO:0016192
Pfam:PF04053 Coatomer_WDAD > GO:membrane coat ; GO:0030117
Pfam:PF04055 Radical_SAM > GO:catalytic activity ; GO:0003824
Pfam:PF04055 Radical_SAM > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF04057 Rep-A_N > GO:DNA binding ; GO:0003677
Pfam:PF04057 Rep-A_N > GO:DNA replication ; GO:0006260
Pfam:PF04057 Rep-A_N > GO:nucleus ; GO:0005634
Pfam:PF04060 FeS > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF04061 ORMDL > GO:integral component of membrane ; GO:0016021
Pfam:PF04062 P21-Arc > GO:regulation of actin filament polymerization ; GO:0030833
Pfam:PF04062 P21-Arc > GO:Arp2/3 complex-mediated actin nucleation ; GO:0034314
Pfam:PF04062 P21-Arc > GO:cytoskeleton ; GO:0005856
Pfam:PF04062 P21-Arc > GO:Arp2/3 protein complex ; GO:0005885
Pfam:PF04065 Not3 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04065 Not3 > GO:nucleus ; GO:0005634
Pfam:PF04066 MrpF_PhaF > GO:ion transmembrane transporter activity ; GO:0015075
Pfam:PF04066 MrpF_PhaF > GO:ion transmembrane transport ; GO:0034220
Pfam:PF04066 MrpF_PhaF > GO:integral component of membrane ; GO:0016021
Pfam:PF04069 OpuAC > GO:transporter activity ; GO:0005215
Pfam:PF04069 OpuAC > GO:transport ; GO:0006810
Pfam:PF04072 LCM > GO:methyltransferase activity ; GO:0008168
Pfam:PF04072 LCM > GO:methylation ; GO:0032259
Pfam:PF04073 tRNA_edit > GO:aminoacyl-tRNA editing activity ; GO:0002161
Pfam:PF04075 DUF385 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF04075 DUF385 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF04077 DsrH > GO:tRNA wobble position uridine thiolation ; GO:0002143
Pfam:PF04077 DsrH > GO:cytoplasm ; GO:0005737
Pfam:PF04079 DUF387 > GO:chromosome separation ; GO:0051304
Pfam:PF04081 DNA_pol_delta_4 > GO:DNA replication ; GO:0006260
Pfam:PF04081 DNA_pol_delta_4 > GO:nucleus ; GO:0005634
Pfam:PF04082 Fungal_trans > GO:DNA binding ; GO:0003677
Pfam:PF04082 Fungal_trans > GO:zinc ion binding ; GO:0008270
Pfam:PF04082 Fungal_trans > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04082 Fungal_trans > GO:nucleus ; GO:0005634
Pfam:PF04083 Abhydro_lipase > GO:lipid metabolic process ; GO:0006629
Pfam:PF04084 ORC2 > GO:DNA replication ; GO:0006260
Pfam:PF04084 ORC2 > GO:origin recognition complex ; GO:0000808
Pfam:PF04084 ORC2 > GO:nucleus ; GO:0005634
Pfam:PF04085 MreC > GO:regulation of cell shape ; GO:0008360
Pfam:PF04086 SRP-alpha_N > GO:GTPase activity ; GO:0003924
Pfam:PF04086 SRP-alpha_N > GO:signal recognition particle binding ; GO:0005047
Pfam:PF04086 SRP-alpha_N > GO:GTP binding ; GO:0005525
Pfam:PF04086 SRP-alpha_N > GO:GTP catabolic process ; GO:0006184
Pfam:PF04086 SRP-alpha_N > GO:intracellular protein transport ; GO:0006886
Pfam:PF04086 SRP-alpha_N > GO:signal recognition particle receptor complex ; GO:0005785
Pfam:PF04088 Peroxin-13_N > GO:protein import into peroxisome matrix, docking ; GO:0016560
Pfam:PF04088 Peroxin-13_N > GO:peroxisome ; GO:0005777
Pfam:PF04088 Peroxin-13_N > GO:integral component of membrane ; GO:0016021
Pfam:PF04091 Sec15 > GO:vesicle docking involved in exocytosis ; GO:0006904
Pfam:PF04091 Sec15 > GO:exocyst ; GO:0000145
Pfam:PF04092 SAG > GO:membrane ; GO:0016020
Pfam:PF04093 MreD > GO:regulation of cell shape ; GO:0008360
Pfam:PF04093 MreD > GO:integral component of membrane ; GO:0016021
Pfam:PF04096 Nucleoporin2 > GO:transport ; GO:0006810
Pfam:PF04096 Nucleoporin2 > GO:nuclear pore ; GO:0005643
Pfam:PF04097 Nic96 > GO:transport ; GO:0006810
Pfam:PF04097 Nic96 > GO:nuclear pore ; GO:0005643
Pfam:PF04098 Rad52_Rad22 > GO:DNA repair ; GO:0006281
Pfam:PF04098 Rad52_Rad22 > GO:DNA recombination ; GO:0006310
Pfam:PF04099 Sybindin > GO:ER to Golgi vesicle-mediated transport ; GO:0006888
Pfam:PF04099 Sybindin > GO:cis-Golgi network ; GO:0005801
Pfam:PF04101 Glyco_tran_28_C > GO:transferase activity, transferring hexosyl groups ; GO:0016758
Pfam:PF04101 Glyco_tran_28_C > GO:carbohydrate binding ; GO:0030246
Pfam:PF04101 Glyco_tran_28_C > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF04101 Glyco_tran_28_C > GO:lipid glycosylation ; GO:0030259
Pfam:PF04103 CD20 > GO:integral component of membrane ; GO:0016021
Pfam:PF04104 DNA_primase_lrg > GO:DNA primase activity ; GO:0003896
Pfam:PF04104 DNA_primase_lrg > GO:DNA replication, synthesis of RNA primer ; GO:0006269
Pfam:PF04106 APG5 > GO:autophagy ; GO:0006914
Pfam:PF04106 APG5 > GO:cytoplasm ; GO:0005737
Pfam:PF04107 GCS2 > GO:glutamate-cysteine ligase activity ; GO:0004357
Pfam:PF04107 GCS2 > GO:cellular modified amino acid biosynthetic process ; GO:0042398
Pfam:PF04108 APG17 > GO:autophagy ; GO:0006914
Pfam:PF04110 APG12 > GO:autophagic vacuole assembly ; GO:0000045
Pfam:PF04110 APG12 > GO:cytoplasm ; GO:0005737
Pfam:PF04111 APG6 > GO:autophagy ; GO:0006914
Pfam:PF04113 Gpi16 > GO:attachment of GPI anchor to protein ; GO:0016255
Pfam:PF04113 Gpi16 > GO:GPI-anchor transamidase complex ; GO:0042765
Pfam:PF04114 Gaa1 > GO:integral component of membrane ; GO:0016021
Pfam:PF04114 Gaa1 > GO:GPI-anchor transamidase complex ; GO:0042765
Pfam:PF04115 Ureidogly_hydro > GO:ureidoglycolate hydrolase activity ; GO:0004848
Pfam:PF04115 Ureidogly_hydro > GO:allantoin catabolic process ; GO:0000256
Pfam:PF04116 FA_hydroxylase > GO:iron ion binding ; GO:0005506
Pfam:PF04116 FA_hydroxylase > GO:oxidoreductase activity ; GO:0016491
Pfam:PF04116 FA_hydroxylase > GO:fatty acid biosynthetic process ; GO:0006633
Pfam:PF04116 FA_hydroxylase > GO:oxidation-reduction process ; GO:0055114
Pfam:PF04117 Mpv17_PMP22 > GO:integral component of membrane ; GO:0016021
Pfam:PF04119 HSP9_HSP12 > GO:response to stress ; GO:0006950
Pfam:PF04120 Iron_permease > GO:transmembrane transport ; GO:0055085
Pfam:PF04121 Nup84_Nup100 > GO:transport ; GO:0006810
Pfam:PF04121 Nup84_Nup100 > GO:nuclear pore ; GO:0005643
Pfam:PF04124 Dor1 > GO:Golgi transport complex ; GO:0017119
Pfam:PF04130 Spc97_Spc98 > GO:microtubule cytoskeleton organization ; GO:0000226
Pfam:PF04130 Spc97_Spc98 > GO:spindle pole ; GO:0000922
Pfam:PF04130 Spc97_Spc98 > GO:microtubule organizing center ; GO:0005815
Pfam:PF04131 NanE > GO:N-acylglucosamine-6-phosphate 2-epimerase activity ; GO:0047465
Pfam:PF04131 NanE > GO:N-acetylmannosamine metabolic process ; GO:0006051
Pfam:PF04135 Nop10p > GO:snoRNA binding ; GO:0030515
Pfam:PF04135 Nop10p > GO:pseudouridine synthesis ; GO:0001522
Pfam:PF04135 Nop10p > GO:ribosome biogenesis ; GO:0042254
Pfam:PF04135 Nop10p > GO:box H/ACA RNP complex ; GO:0072588
Pfam:PF04136 Sec34 > GO:intracellular protein transport ; GO:0006886
Pfam:PF04136 Sec34 > GO:cis-Golgi network ; GO:0005801
Pfam:PF04136 Sec34 > GO:membrane ; GO:0016020
Pfam:PF04137 ERO1 > GO:protein disulfide isomerase activity ; GO:0003756
Pfam:PF04137 ERO1 > GO:oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor ; GO:0016671
Pfam:PF04137 ERO1 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF04137 ERO1 > GO:endoplasmic reticulum ; GO:0005783
Pfam:PF04138 GtrA > GO:polysaccharide biosynthetic process ; GO:0000271
Pfam:PF04138 GtrA > GO:transport ; GO:0006810
Pfam:PF04138 GtrA > GO:integral component of membrane ; GO:0016021
Pfam:PF04139 Rad9 > GO:DNA damage checkpoint ; GO:0000077
Pfam:PF04139 Rad9 > GO:checkpoint clamp complex ; GO:0030896
Pfam:PF04140 ICMT > GO:protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity ; GO:0004671
Pfam:PF04140 ICMT > GO:C-terminal protein methylation ; GO:0006481
Pfam:PF04140 ICMT > GO:integral component of membrane ; GO:0016021
Pfam:PF04142 Nuc_sug_transp > GO:sugar:proton symporter activity ; GO:0005351
Pfam:PF04142 Nuc_sug_transp > GO:carbohydrate transport ; GO:0008643
Pfam:PF04142 Nuc_sug_transp > GO:Golgi membrane ; GO:0000139
Pfam:PF04142 Nuc_sug_transp > GO:integral component of membrane ; GO:0016021
Pfam:PF04144 SCAMP > GO:protein transport ; GO:0015031
Pfam:PF04144 SCAMP > GO:integral component of membrane ; GO:0016021
Pfam:PF04145 Ctr > GO:copper ion transmembrane transporter activity ; GO:0005375
Pfam:PF04145 Ctr > GO:copper ion transmembrane transport ; GO:0035434
Pfam:PF04145 Ctr > GO:integral component of membrane ; GO:0016021
Pfam:PF04147 Nop14 > GO:small-subunit processome ; GO:0032040
Pfam:PF04152 Mre11_DNA_bind > GO:endonuclease activity ; GO:0004519
Pfam:PF04152 Mre11_DNA_bind > GO:manganese ion binding ; GO:0030145
Pfam:PF04152 Mre11_DNA_bind > GO:double-strand break repair ; GO:0006302
Pfam:PF04152 Mre11_DNA_bind > GO:nucleus ; GO:0005634
Pfam:PF04153 NOT2_3_5 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04153 NOT2_3_5 > GO:nucleus ; GO:0005634
Pfam:PF04159 NB > GO:integral component of membrane ; GO:0016021
Pfam:PF04162 Gyro_capsid > GO:viral capsid ; GO:0019028
Pfam:PF04166 PdxA > GO:4-hydroxythreonine-4-phosphate dehydrogenase activity ; GO:0050570
Pfam:PF04166 PdxA > GO:NAD binding ; GO:0051287
Pfam:PF04166 PdxA > GO:pyridoxine biosynthetic process ; GO:0008615
Pfam:PF04166 PdxA > GO:oxidation-reduction process ; GO:0055114
Pfam:PF04177 TAP42 > GO:regulation of signal transduction ; GO:0009966
Pfam:PF04178 Got1 > GO:vesicle-mediated transport ; GO:0016192
Pfam:PF04179 Init_tRNA_PT > GO:transferase activity, transferring pentosyl groups ; GO:0016763
Pfam:PF04183 IucA_IucC > GO:siderophore transmembrane transporter activity ; GO:0015343
Pfam:PF04183 IucA_IucC > GO:siderophore biosynthetic process ; GO:0019290
Pfam:PF04185 Phosphoesterase > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF04186 FxsA > GO:membrane ; GO:0016020
Pfam:PF04188 Mannosyl_trans2 > GO:transferase activity, transferring hexosyl groups ; GO:0016758
Pfam:PF04188 Mannosyl_trans2 > GO:GPI anchor biosynthetic process ; GO:0006506
Pfam:PF04189 Gcd10p > GO:translation initiation factor activity ; GO:0003743
Pfam:PF04189 Gcd10p > GO:translational initiation ; GO:0006413
Pfam:PF04192 Utp21 > GO:rRNA processing ; GO:0006364
Pfam:PF04192 Utp21 > GO:small-subunit processome ; GO:0032040
Pfam:PF04194 PDCD2_C > GO:cytoplasm ; GO:0005737
Pfam:PF04196 Bunya_RdRp > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF04196 Bunya_RdRp > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04196 Bunya_RdRp > GO:viral genome replication ; GO:0019079
Pfam:PF04197 Birna_RdRp > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF04197 Birna_RdRp > GO:viral genome replication ; GO:0019079
Pfam:PF04198 Sugar-bind > GO:carbohydrate binding ; GO:0030246
Pfam:PF04199 Cyclase > GO:arylformamidase activity ; GO:0004061
Pfam:PF04199 Cyclase > GO:tryptophan catabolic process to kynurenine ; GO:0019441
Pfam:PF04204 HTS > GO:homoserine O-succinyltransferase activity ; GO:0008899
Pfam:PF04204 HTS > GO:L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine ; GO:0019281
Pfam:PF04204 HTS > GO:cytoplasm ; GO:0005737
Pfam:PF04205 FMN_bind > GO:FMN binding ; GO:0010181
Pfam:PF04205 FMN_bind > GO:membrane ; GO:0016020
Pfam:PF04206 MtrE > GO:tetrahydromethanopterin S-methyltransferase activity ; GO:0030269
Pfam:PF04206 MtrE > GO:sodium ion transport ; GO:0006814
Pfam:PF04206 MtrE > GO:cytoplasm ; GO:0005737
Pfam:PF04206 MtrE > GO:vesicle membrane ; GO:0012506
Pfam:PF04207 MtrD > GO:tetrahydromethanopterin S-methyltransferase activity ; GO:0030269
Pfam:PF04207 MtrD > GO:sodium ion transport ; GO:0006814
Pfam:PF04207 MtrD > GO:cytoplasm ; GO:0005737
Pfam:PF04207 MtrD > GO:vesicle membrane ; GO:0012506
Pfam:PF04208 MtrA > GO:tetrahydromethanopterin S-methyltransferase activity ; GO:0030269
Pfam:PF04208 MtrA > GO:cobalt ion binding ; GO:0050897
Pfam:PF04208 MtrA > GO:sodium ion transport ; GO:0006814
Pfam:PF04209 HgmA > GO:homogentisate 1,2-dioxygenase activity ; GO:0004411
Pfam:PF04209 HgmA > GO:L-phenylalanine catabolic process ; GO:0006559
Pfam:PF04209 HgmA > GO:tyrosine metabolic process ; GO:0006570
Pfam:PF04209 HgmA > GO:oxidation-reduction process ; GO:0055114
Pfam:PF04210 MtrG > GO:tetrahydromethanopterin S-methyltransferase activity ; GO:0030269
Pfam:PF04210 MtrG > GO:methanogenesis ; GO:0015948
Pfam:PF04210 MtrG > GO:integral component of membrane ; GO:0016021
Pfam:PF04211 MtrC > GO:tetrahydromethanopterin S-methyltransferase activity ; GO:0030269
Pfam:PF04211 MtrC > GO:methanogenesis ; GO:0015948
Pfam:PF04211 MtrC > GO:integral component of membrane ; GO:0016021
Pfam:PF04216 FdhE > GO:cytoplasm ; GO:0005737
Pfam:PF04218 CENP-B_N > GO:DNA binding ; GO:0003677
Pfam:PF04223 CitF > GO:citrate CoA-transferase activity ; GO:0008814
Pfam:PF04223 CitF > GO:acetyl-CoA metabolic process ; GO:0006084
Pfam:PF04223 CitF > GO:cytoplasm ; GO:0005737
Pfam:PF04223 CitF > GO:citrate lyase complex ; GO:0009346
Pfam:PF04226 Transgly_assoc > GO:integral component of membrane ; GO:0016021
Pfam:PF04227 Indigoidine_A > GO:hydrolase activity, acting on glycosyl bonds ; GO:0016798
Pfam:PF04231 Endonuclease_1 > GO:nuclease activity ; GO:0004518
Pfam:PF04234 CopC > GO:copper ion binding ; GO:0005507
Pfam:PF04234 CopC > GO:response to copper ion ; GO:0046688
Pfam:PF04234 CopC > GO:periplasmic space ; GO:0042597
Pfam:PF04245 NA37 > GO:nucleoid ; GO:0009295
Pfam:PF04258 Peptidase_A22B > GO:aspartic-type endopeptidase activity ; GO:0004190
Pfam:PF04258 Peptidase_A22B > GO:integral component of membrane ; GO:0016021
Pfam:PF04259 SASP_gamma > GO:sporulation resulting in formation of a cellular spore ; GO:0030435
Pfam:PF04261 Dyp_perox > GO:peroxidase activity ; GO:0004601
Pfam:PF04261 Dyp_perox > GO:heme binding ; GO:0020037
Pfam:PF04261 Dyp_perox > GO:oxidation-reduction process ; GO:0055114
Pfam:PF04262 Glu_cys_ligase > GO:glutamate-cysteine ligase activity ; GO:0004357
Pfam:PF04262 Glu_cys_ligase > GO:glutathione biosynthetic process ; GO:0006750
Pfam:PF04263 TPK_catalytic > GO:thiamine diphosphokinase activity ; GO:0004788
Pfam:PF04263 TPK_catalytic > GO:ATP binding ; GO:0005524
Pfam:PF04263 TPK_catalytic > GO:thiamine diphosphate biosynthetic process ; GO:0009229
Pfam:PF04265 TPK_B1_binding > GO:thiamine binding ; GO:0030975
Pfam:PF04265 TPK_B1_binding > GO:thiamine diphosphate biosynthetic process ; GO:0009229
Pfam:PF04267 SoxD > GO:sarcosine oxidase activity ; GO:0008115
Pfam:PF04267 SoxD > GO:tetrahydrofolate metabolic process ; GO:0046653
Pfam:PF04272 Phospholamban > GO:calcium channel regulator activity ; GO:0005246
Pfam:PF04272 Phospholamban > GO:ATPase inhibitor activity ; GO:0042030
Pfam:PF04272 Phospholamban > GO:calcium ion transport ; GO:0006816
Pfam:PF04272 Phospholamban > GO:membrane ; GO:0016020
Pfam:PF04273 DUF442 > GO:hydrolase activity ; GO:0016787
Pfam:PF04275 P-mevalo_kinase > GO:phosphomevalonate kinase activity ; GO:0004631
Pfam:PF04275 P-mevalo_kinase > GO:cholesterol biosynthetic process ; GO:0006695
Pfam:PF04275 P-mevalo_kinase > GO:cytoplasm ; GO:0005737
Pfam:PF04277 OAD_gamma > GO:oxaloacetate decarboxylase activity ; GO:0008948
Pfam:PF04277 OAD_gamma > GO:sodium ion transmembrane transporter activity ; GO:0015081
Pfam:PF04277 OAD_gamma > GO:sodium ion export ; GO:0071436
Pfam:PF04277 OAD_gamma > GO:membrane ; GO:0016020
Pfam:PF04279 IspA > GO:integral component of membrane ; GO:0016021
Pfam:PF04281 Tom22 > GO:intracellular protein transport ; GO:0006886
Pfam:PF04281 Tom22 > GO:mitochondrial outer membrane ; GO:0005741
Pfam:PF04288 MukE > GO:chromosome segregation ; GO:0007059
Pfam:PF04288 MukE > GO:chromosome condensation ; GO:0030261
Pfam:PF04288 MukE > GO:cytoplasm ; GO:0005737
Pfam:PF04295 GD_AH_C > GO:hydro-lyase activity ; GO:0016836
Pfam:PF04309 G3P_antiterm > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04309 G3P_antiterm > GO:response to biotic stimulus ; GO:0009607
Pfam:PF04310 MukB > GO:DNA binding ; GO:0003677
Pfam:PF04310 MukB > GO:ATP binding ; GO:0005524
Pfam:PF04310 MukB > GO:chromosome segregation ; GO:0007059
Pfam:PF04310 MukB > GO:chromosome condensation ; GO:0030261
Pfam:PF04310 MukB > GO:nucleoid ; GO:0009295
Pfam:PF04313 HSDR_N > GO:DNA binding ; GO:0003677
Pfam:PF04313 HSDR_N > GO:endonuclease activity ; GO:0004519
Pfam:PF04313 HSDR_N > GO:DNA modification ; GO:0006304
Pfam:PF04316 FlgM > GO:negative regulation of transcription, DNA-templated ; GO:0045892
Pfam:PF04319 NifZ > GO:nitrogen fixation ; GO:0009399
Pfam:PF04321 RmlD_sub_bind > GO:dTDP-4-dehydrorhamnose reductase activity ; GO:0008831
Pfam:PF04321 RmlD_sub_bind > GO:extracellular polysaccharide biosynthetic process ; GO:0045226
Pfam:PF04326 AAA_4 > GO:ATP binding ; GO:0005524
Pfam:PF04333 VacJ > GO:membrane ; GO:0016020
Pfam:PF04335 VirB8 > GO:membrane ; GO:0016020
Pfam:PF04336 DUF479 > GO:[acyl-carrier-protein] phosphodiesterase activity ; GO:0008770
Pfam:PF04336 DUF479 > GO:fatty acid biosynthetic process ; GO:0006633
Pfam:PF04344 CheZ > GO:catalytic activity ; GO:0003824
Pfam:PF04344 CheZ > GO:regulation of chemotaxis ; GO:0050920
Pfam:PF04344 CheZ > GO:bacterial-type flagellum ; GO:0009288
Pfam:PF04345 Chor_lyase > GO:chorismate lyase activity ; GO:0008813
Pfam:PF04345 Chor_lyase > GO:ubiquinone biosynthetic process ; GO:0006744
Pfam:PF04345 Chor_lyase > GO:cytoplasm ; GO:0005737
Pfam:PF04346 EutH > GO:ethanolamine transmembrane transporter activity ; GO:0034228
Pfam:PF04346 EutH > GO:ethanolamine transport ; GO:0034229
Pfam:PF04346 EutH > GO:integral component of membrane ; GO:0016021
Pfam:PF04347 FliO > GO:bacterial-type flagellum organization ; GO:0044781
Pfam:PF04347 FliO > GO:integral component of membrane ; GO:0016021
Pfam:PF04349 MdoG > GO:carbohydrate biosynthetic process ; GO:0016051
Pfam:PF04349 MdoG > GO:periplasmic space ; GO:0042597
Pfam:PF04353 Rsd_AlgQ > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04354 ZipA_C > GO:barrier septum assembly ; GO:0000917
Pfam:PF04354 ZipA_C > GO:integral component of membrane ; GO:0016021
Pfam:PF04355 SmpA_OmlA > GO:outer membrane ; GO:0019867
Pfam:PF04362 Iron_traffic > GO:iron ion binding ; GO:0005506
Pfam:PF04364 DNA_pol3_chi > GO:DNA binding ; GO:0003677
Pfam:PF04364 DNA_pol3_chi > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF04364 DNA_pol3_chi > GO:DNA replication ; GO:0006260
Pfam:PF04369 Lactococcin > GO:defense response to bacterium ; GO:0042742
Pfam:PF04369 Lactococcin > GO:extracellular region ; GO:0005576
Pfam:PF04371 PAD_porph > GO:protein-arginine deiminase activity ; GO:0004668
Pfam:PF04371 PAD_porph > GO:putrescine biosynthetic process ; GO:0009446
Pfam:PF04376 ATE_N > GO:arginyltransferase activity ; GO:0004057
Pfam:PF04376 ATE_N > GO:protein arginylation ; GO:0016598
Pfam:PF04377 ATE_C > GO:arginyltransferase activity ; GO:0004057
Pfam:PF04377 ATE_C > GO:protein arginylation ; GO:0016598
Pfam:PF04378 RsmJ > GO:rRNA methyltransferase activity ; GO:0008649
Pfam:PF04378 RsmJ > GO:rRNA base methylation ; GO:0070475
Pfam:PF04381 RdgC > GO:DNA recombination ; GO:0006310
Pfam:PF04382 SAB > GO:cytoskeletal protein binding ; GO:0008092
Pfam:PF04382 SAB > GO:cortical actin cytoskeleton organization ; GO:0030866
Pfam:PF04382 SAB > GO:cytoskeleton ; GO:0005856
Pfam:PF04384 Fe-S_assembly > GO:iron-sulfur cluster assembly ; GO:0016226
Pfam:PF04390 LptE > GO:Gram-negative-bacterium-type cell outer membrane assembly ; GO:0043165
Pfam:PF04390 LptE > GO:outer membrane ; GO:0019867
Pfam:PF04397 LytTR > GO:DNA binding ; GO:0003677
Pfam:PF04406 TP6A_N > GO:DNA binding ; GO:0003677
Pfam:PF04406 TP6A_N > GO:catalytic activity ; GO:0003824
Pfam:PF04406 TP6A_N > GO:ATP binding ; GO:0005524
Pfam:PF04406 TP6A_N > GO:DNA metabolic process ; GO:0006259
Pfam:PF04406 TP6A_N > GO:chromosome ; GO:0005694
Pfam:PF04408 HA2 > GO:helicase activity ; GO:0004386
Pfam:PF04410 Gar1 > GO:pseudouridine synthesis ; GO:0001522
Pfam:PF04410 Gar1 > GO:ribosome biogenesis ; GO:0042254
Pfam:PF04414 tRNA_deacylase > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF04414 tRNA_deacylase > GO:D-aminoacyl-tRNA deacylase activity ; GO:0051499
Pfam:PF04420 CHD5 > GO:tail-anchored membrane protein insertion into ER membrane ; GO:0071816
Pfam:PF04421 Mss4 > GO:guanyl-nucleotide exchange factor activity ; GO:0005085
Pfam:PF04421 Mss4 > GO:small GTPase mediated signal transduction ; GO:0007264
Pfam:PF04423 Rad50_zn_hook > GO:nuclease activity ; GO:0004518
Pfam:PF04423 Rad50_zn_hook > GO:ATP binding ; GO:0005524
Pfam:PF04423 Rad50_zn_hook > GO:zinc ion binding ; GO:0008270
Pfam:PF04423 Rad50_zn_hook > GO:DNA repair ; GO:0006281
Pfam:PF04428 Choline_kin_N > GO:phosphotransferase activity, alcohol group as acceptor ; GO:0016773
Pfam:PF04431 Pec_lyase_N > GO:pectate lyase activity ; GO:0030570
Pfam:PF04433 SWIRM > GO:protein binding ; GO:0005515
Pfam:PF04434 SWIM > GO:zinc ion binding ; GO:0008270
Pfam:PF04440 Dysbindin > GO:cytoplasm ; GO:0005737
Pfam:PF04441 Pox_VERT_large > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF04442 CtaG_Cox11 > GO:copper ion binding ; GO:0005507
Pfam:PF04443 LuxE > GO:long-chain fatty acid luciferin component ligase activity ; GO:0047474
Pfam:PF04443 LuxE > GO:bioluminescence ; GO:0008218
Pfam:PF04444 Dioxygenase_N > GO:iron ion binding ; GO:0005506
Pfam:PF04444 Dioxygenase_N > GO:catechol 1,2-dioxygenase activity ; GO:0018576
Pfam:PF04444 Dioxygenase_N > GO:catechol-containing compound metabolic process ; GO:0009712
Pfam:PF04444 Dioxygenase_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF04446 Thg1 > GO:magnesium ion binding ; GO:0000287
Pfam:PF04446 Thg1 > GO:tRNA guanylyltransferase activity ; GO:0008193
Pfam:PF04446 Thg1 > GO:tRNA modification ; GO:0006400
Pfam:PF04449 Fimbrial_CS1 > GO:pilus ; GO:0009289
Pfam:PF04451 Capsid_NCLDV > GO:structural molecule activity ; GO:0005198
Pfam:PF04451 Capsid_NCLDV > GO:viral capsid ; GO:0019028
Pfam:PF04452 Methyltrans_RNA > GO:methyltransferase activity ; GO:0008168
Pfam:PF04452 Methyltrans_RNA > GO:rRNA processing ; GO:0006364
Pfam:PF04453 OstA_C > GO:response to organic substance ; GO:0010033
Pfam:PF04453 OstA_C > GO:membrane organization ; GO:0061024
Pfam:PF04453 OstA_C > GO:outer membrane ; GO:0019867
Pfam:PF04454 Linocin_M18 > GO:peptidase activity ; GO:0008233
Pfam:PF04454 Linocin_M18 > GO:defense response to bacterium ; GO:0042742
Pfam:PF04464 Glyphos_transf > GO:CDP-glycerol glycerophosphotransferase activity ; GO:0047355
Pfam:PF04464 Glyphos_transf > GO:membrane ; GO:0016020
Pfam:PF04466 Terminase_3 > GO:DNA packaging ; GO:0006323
Pfam:PF04471 Mrr_cat > GO:DNA binding ; GO:0003677
Pfam:PF04471 Mrr_cat > GO:endonuclease activity ; GO:0004519
Pfam:PF04471 Mrr_cat > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF04472 DUF552 > GO:barrier septum assembly ; GO:0000917
Pfam:PF04479 RTA1 > GO:response to stress ; GO:0006950
Pfam:PF04479 RTA1 > GO:integral component of membrane ; GO:0016021
Pfam:PF04487 CITED > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04487 CITED > GO:nucleus ; GO:0005634
Pfam:PF04492 Phage_rep_O > GO:DNA replication ; GO:0006260
Pfam:PF04493 Endonuclease_5 > GO:endonuclease activity ; GO:0004519
Pfam:PF04493 Endonuclease_5 > GO:DNA repair ; GO:0006281
Pfam:PF04494 TFIID_90kDa > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04494 TFIID_90kDa > GO:nucleus ; GO:0005634
Pfam:PF04496 Herpes_UL35 > GO:viral capsid ; GO:0019028
Pfam:PF04498 Pox_VP8_L4R > GO:structural molecule activity ; GO:0005198
Pfam:PF04498 Pox_VP8_L4R > GO:viral capsid ; GO:0019028
Pfam:PF04501 Baculo_VP39 > GO:structural molecule activity ; GO:0005198
Pfam:PF04501 Baculo_VP39 > GO:viral capsid ; GO:0019028
Pfam:PF04503 SSDP > GO:DNA binding ; GO:0003677
Pfam:PF04503 SSDP > GO:nucleus ; GO:0005634
Pfam:PF04505 Dispanin > GO:response to biotic stimulus ; GO:0009607
Pfam:PF04505 Dispanin > GO:integral component of membrane ; GO:0016021
Pfam:PF04506 Rft-1 > GO:lipid transporter activity ; GO:0005319
Pfam:PF04506 Rft-1 > GO:lipid transport ; GO:0006869
Pfam:PF04506 Rft-1 > GO:integral component of membrane ; GO:0016021
Pfam:PF04508 Pox_A_type_inc > GO:viral process ; GO:0016032
Pfam:PF04509 CheC > GO:hydrolase activity ; GO:0016787
Pfam:PF04512 Baculo_PEP_N > GO:structural molecule activity ; GO:0005198
Pfam:PF04512 Baculo_PEP_N > GO:viral capsid ; GO:0019028
Pfam:PF04512 Baculo_PEP_N > GO:viral envelope ; GO:0019031
Pfam:PF04513 Baculo_PEP_C > GO:structural molecule activity ; GO:0005198
Pfam:PF04513 Baculo_PEP_C > GO:viral capsid ; GO:0019028
Pfam:PF04513 Baculo_PEP_C > GO:viral envelope ; GO:0019031
Pfam:PF04514 BTV_NS2 > GO:RNA binding ; GO:0003723
Pfam:PF04517 Microvir_lysis > GO:enzyme inhibitor activity ; GO:0004857
Pfam:PF04517 Microvir_lysis > GO:modulation by virus of host process ; GO:0019054
Pfam:PF04522 DUF585 > GO:RNA binding ; GO:0003723
Pfam:PF04522 DUF585 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF04522 DUF585 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04523 Herpes_U30 > GO:virion assembly ; GO:0019068
Pfam:PF04537 Herpes_UL55 > GO:viral life cycle ; GO:0019058
Pfam:PF04539 Sigma70_r3 > GO:DNA binding ; GO:0003677
Pfam:PF04539 Sigma70_r3 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF04539 Sigma70_r3 > GO:sigma factor activity ; GO:0016987
Pfam:PF04539 Sigma70_r3 > GO:DNA-templated transcription, initiation ; GO:0006352
Pfam:PF04539 Sigma70_r3 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04542 Sigma70_r2 > GO:DNA binding ; GO:0003677
Pfam:PF04542 Sigma70_r2 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF04542 Sigma70_r2 > GO:sigma factor activity ; GO:0016987
Pfam:PF04542 Sigma70_r2 > GO:DNA-templated transcription, initiation ; GO:0006352
Pfam:PF04542 Sigma70_r2 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04544 Herpes_UL20 > GO:viral life cycle ; GO:0019058
Pfam:PF04545 Sigma70_r4 > GO:DNA binding ; GO:0003677
Pfam:PF04545 Sigma70_r4 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF04545 Sigma70_r4 > GO:sigma factor activity ; GO:0016987
Pfam:PF04545 Sigma70_r4 > GO:DNA-templated transcription, initiation ; GO:0006352
Pfam:PF04545 Sigma70_r4 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04546 Sigma70_ner > GO:DNA binding ; GO:0003677
Pfam:PF04546 Sigma70_ner > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF04546 Sigma70_ner > GO:sigma factor activity ; GO:0016987
Pfam:PF04546 Sigma70_ner > GO:DNA-templated transcription, initiation ; GO:0006352
Pfam:PF04546 Sigma70_ner > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04548 AIG1 > GO:GTP binding ; GO:0005525
Pfam:PF04551 GcpE > GO:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity ; GO:0046429
Pfam:PF04551 GcpE > GO:terpenoid biosynthetic process ; GO:0016114
Pfam:PF04551 GcpE > GO:oxidation-reduction process ; GO:0055114
Pfam:PF04554 Extensin_2 > GO:structural constituent of cell wall ; GO:0005199
Pfam:PF04554 Extensin_2 > GO:plant-type cell wall organization ; GO:0009664
Pfam:PF04555 XhoI > GO:DNA binding ; GO:0003677
Pfam:PF04555 XhoI > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF04555 XhoI > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF04556 DpnII > GO:DNA binding ; GO:0003677
Pfam:PF04556 DpnII > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF04556 DpnII > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF04557 tRNA_synt_1c_R2 > GO:nucleotide binding ; GO:0000166
Pfam:PF04557 tRNA_synt_1c_R2 > GO:glutamine-tRNA ligase activity ; GO:0004819
Pfam:PF04557 tRNA_synt_1c_R2 > GO:ATP binding ; GO:0005524
Pfam:PF04557 tRNA_synt_1c_R2 > GO:glutaminyl-tRNA aminoacylation ; GO:0006425
Pfam:PF04557 tRNA_synt_1c_R2 > GO:cytoplasm ; GO:0005737
Pfam:PF04558 tRNA_synt_1c_R1 > GO:nucleotide binding ; GO:0000166
Pfam:PF04558 tRNA_synt_1c_R1 > GO:aminoacyl-tRNA ligase activity ; GO:0004812
Pfam:PF04558 tRNA_synt_1c_R1 > GO:ATP binding ; GO:0005524
Pfam:PF04558 tRNA_synt_1c_R1 > GO:tRNA aminoacylation for protein translation ; GO:0006418
Pfam:PF04558 tRNA_synt_1c_R1 > GO:cytoplasm ; GO:0005737
Pfam:PF04559 Herpes_UL17 > GO:DNA packaging ; GO:0006323
Pfam:PF04559 Herpes_UL17 > GO:virion ; GO:0019012
Pfam:PF04560 RNA_pol_Rpb2_7 > GO:DNA binding ; GO:0003677
Pfam:PF04560 RNA_pol_Rpb2_7 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF04560 RNA_pol_Rpb2_7 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04561 RNA_pol_Rpb2_2 > GO:DNA binding ; GO:0003677
Pfam:PF04561 RNA_pol_Rpb2_2 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF04561 RNA_pol_Rpb2_2 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04563 RNA_pol_Rpb2_1 > GO:DNA binding ; GO:0003677
Pfam:PF04563 RNA_pol_Rpb2_1 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF04563 RNA_pol_Rpb2_1 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04564 U-box > GO:ubiquitin-protein transferase activity ; GO:0004842
Pfam:PF04564 U-box > GO:protein ubiquitination ; GO:0016567
Pfam:PF04565 RNA_pol_Rpb2_3 > GO:DNA binding ; GO:0003677
Pfam:PF04565 RNA_pol_Rpb2_3 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF04565 RNA_pol_Rpb2_3 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04566 RNA_pol_Rpb2_4 > GO:DNA binding ; GO:0003677
Pfam:PF04566 RNA_pol_Rpb2_4 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF04566 RNA_pol_Rpb2_4 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04567 RNA_pol_Rpb2_5 > GO:DNA binding ; GO:0003677
Pfam:PF04567 RNA_pol_Rpb2_5 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF04567 RNA_pol_Rpb2_5 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04568 IATP > GO:enzyme inhibitor activity ; GO:0004857
Pfam:PF04568 IATP > GO:negative regulation of nucleotide metabolic process ; GO:0045980
Pfam:PF04568 IATP > GO:mitochondrion ; GO:0005739
Pfam:PF04573 SPC22 > GO:peptidase activity ; GO:0008233
Pfam:PF04573 SPC22 > GO:signal peptide processing ; GO:0006465
Pfam:PF04573 SPC22 > GO:signal peptidase complex ; GO:0005787
Pfam:PF04573 SPC22 > GO:integral component of membrane ; GO:0016021
Pfam:PF04574 DUF592 > GO:zinc ion binding ; GO:0008270
Pfam:PF04574 DUF592 > GO:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides ; GO:0016811
Pfam:PF04574 DUF592 > GO:NAD-dependent histone deacetylase activity ; GO:0017136
Pfam:PF04574 DUF592 > GO:NAD binding ; GO:0051287
Pfam:PF04574 DUF592 > GO:chromatin silencing ; GO:0006342
Pfam:PF04574 DUF592 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04574 DUF592 > GO:protein deacetylation ; GO:0006476
Pfam:PF04577 DUF563 > GO:transferase activity, transferring glycosyl groups ; GO:0016757
Pfam:PF04579 Keratin_matx > GO:structural molecule activity ; GO:0005198
Pfam:PF04579 Keratin_matx > GO:keratin filament ; GO:0045095
Pfam:PF04583 Baculo_p74 > GO:viral life cycle ; GO:0019058
Pfam:PF04584 Pox_A28 > GO:viral process ; GO:0016032
Pfam:PF04584 Pox_A28 > GO:viral envelope ; GO:0019031
Pfam:PF04587 ADP_PFK_GK > GO:phosphotransferase activity, alcohol group as acceptor ; GO:0016773
Pfam:PF04587 ADP_PFK_GK > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF04589 RFX1_trans_act > GO:DNA binding ; GO:0003677
Pfam:PF04589 RFX1_trans_act > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04589 RFX1_trans_act > GO:nucleus ; GO:0005634
Pfam:PF04592 SelP_N > GO:selenium binding ; GO:0008430
Pfam:PF04593 SelP_C > GO:selenium binding ; GO:0008430
Pfam:PF04595 Pox_I6 > GO:viral process ; GO:0016032
Pfam:PF04597 Ribophorin_I > GO:dolichyl-diphosphooligosaccharide-protein glycotransferase activity ; GO:0004579
Pfam:PF04597 Ribophorin_I > GO:protein glycosylation ; GO:0006486
Pfam:PF04597 Ribophorin_I > GO:endoplasmic reticulum ; GO:0005783
Pfam:PF04597 Ribophorin_I > GO:integral component of membrane ; GO:0016021
Pfam:PF04602 Arabinose_trans > GO:arabinosyltransferase activity ; GO:0052636
Pfam:PF04602 Arabinose_trans > GO:Actinobacterium-type cell wall biogenesis ; GO:0071766
Pfam:PF04604 L_biotic_typeA > GO:defense response to bacterium ; GO:0042742
Pfam:PF04604 L_biotic_typeA > GO:extracellular region ; GO:0005576
Pfam:PF04607 RelA_SpoT > GO:guanosine tetraphosphate metabolic process ; GO:0015969
Pfam:PF04608 PgpA > GO:phosphatidylglycerophosphatase activity ; GO:0008962
Pfam:PF04608 PgpA > GO:lipid metabolic process ; GO:0006629
Pfam:PF04610 TrbL > GO:protein secretion by the type IV secretion system ; GO:0030255
Pfam:PF04611 AalphaY_MDB > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04611 AalphaY_MDB > GO:sexual reproduction ; GO:0019953
Pfam:PF04612 T2SM > GO:extracellular transport ; GO:0006858
Pfam:PF04613 LpxD > GO:transferase activity, transferring acyl groups other than amino-acyl groups ; GO:0016747
Pfam:PF04613 LpxD > GO:lipid A biosynthetic process ; GO:0009245
Pfam:PF04614 Pex19 > GO:peroxisome ; GO:0005777
Pfam:PF04615 Utp14 > GO:rRNA processing ; GO:0006364
Pfam:PF04615 Utp14 > GO:small-subunit processome ; GO:0032040
Pfam:PF04616 Glyco_hydro_43 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF04616 Glyco_hydro_43 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF04617 Hox9_act > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04617 Hox9_act > GO:nucleus ; GO:0005634
Pfam:PF04618 HD-ZIP_N > GO:nucleus ; GO:0005634
Pfam:PF04620 FlaA > GO:bacterial-type flagellum-dependent cell motility ; GO:0071973
Pfam:PF04620 FlaA > GO:outer membrane-bounded periplasmic space ; GO:0030288
Pfam:PF04621 ETS_PEA3_N > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF04621 ETS_PEA3_N > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04621 ETS_PEA3_N > GO:nucleus ; GO:0005634
Pfam:PF04623 Adeno_E1B_55K_N > GO:response to external stimulus ; GO:0009605
Pfam:PF04624 Dec-1 > GO:structural constituent of chorion ; GO:0005213
Pfam:PF04624 Dec-1 > GO:chorion-containing eggshell formation ; GO:0007304
Pfam:PF04624 Dec-1 > GO:extracellular region ; GO:0005576
Pfam:PF04624 Dec-1 > GO:chorion ; GO:0042600
Pfam:PF04625 DEC-1_N > GO:structural constituent of chorion ; GO:0005213
Pfam:PF04625 DEC-1_N > GO:chorion-containing eggshell formation ; GO:0007304
Pfam:PF04625 DEC-1_N > GO:extracellular region ; GO:0005576
Pfam:PF04625 DEC-1_N > GO:chorion ; GO:0042600
Pfam:PF04626 DEC-1_C > GO:structural constituent of chorion ; GO:0005213
Pfam:PF04626 DEC-1_C > GO:chorion-containing eggshell formation ; GO:0007304
Pfam:PF04626 DEC-1_C > GO:extracellular region ; GO:0005576
Pfam:PF04626 DEC-1_C > GO:chorion ; GO:0042600
Pfam:PF04627 ATP-synt_Eps > GO:proton-transporting ATP synthase activity, rotational mechanism ; GO:0046933
Pfam:PF04627 ATP-synt_Eps > GO:proton-transporting ATPase activity, rotational mechanism ; GO:0046961
Pfam:PF04627 ATP-synt_Eps > GO:ATP synthesis coupled proton transport ; GO:0015986
Pfam:PF04627 ATP-synt_Eps > GO:mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) ; GO:0000275
Pfam:PF04628 Sedlin_N > GO:ER to Golgi vesicle-mediated transport ; GO:0006888
Pfam:PF04628 Sedlin_N > GO:intracellular ; GO:0005622
Pfam:PF04632 FUSC > GO:transport ; GO:0006810
Pfam:PF04632 FUSC > GO:plasma membrane ; GO:0005886
Pfam:PF04636 PA26 > GO:regulation of response to reactive oxygen species ; GO:1901031
Pfam:PF04636 PA26 > GO:nucleus ; GO:0005634
Pfam:PF04639 Baculo_E56 > GO:viral envelope ; GO:0019031
Pfam:PF04643 Motilin_assoc > GO:hormone activity ; GO:0005179
Pfam:PF04643 Motilin_assoc > GO:extracellular region ; GO:0005576
Pfam:PF04644 Motilin_ghrelin > GO:hormone activity ; GO:0005179
Pfam:PF04644 Motilin_ghrelin > GO:extracellular region ; GO:0005576
Pfam:PF04647 AgrB > GO:peptidase activity ; GO:0008233
Pfam:PF04647 AgrB > GO:quorum sensing ; GO:0009372
Pfam:PF04647 AgrB > GO:pathogenesis ; GO:0009405
Pfam:PF04647 AgrB > GO:integral component of membrane ; GO:0016021
Pfam:PF04648 MF_alpha > GO:mating pheromone activity ; GO:0000772
Pfam:PF04648 MF_alpha > GO:sexual reproduction ; GO:0019953
Pfam:PF04648 MF_alpha > GO:extracellular region ; GO:0005576
Pfam:PF04650 YSIRK_signal > GO:membrane ; GO:0016020
Pfam:PF04655 APH_6_hur > GO:phosphotransferase activity, alcohol group as acceptor ; GO:0016773
Pfam:PF04655 APH_6_hur > GO:protein phosphorylation ; GO:0006468
Pfam:PF04655 APH_6_hur > GO:secondary metabolic process ; GO:0019748
Pfam:PF04658 TAFII55_N > GO:transcription initiation from RNA polymerase II promoter ; GO:0006367
Pfam:PF04658 TAFII55_N > GO:transcription factor TFIID complex ; GO:0005669
Pfam:PF04659 Arch_fla_DE > GO:archaeal or bacterial-type flagellum-dependent cell motility ; GO:0097588
Pfam:PF04661 Pox_I3 > GO:single-stranded DNA binding ; GO:0003697
Pfam:PF04664 OGFr_N > GO:receptor activity ; GO:0004872
Pfam:PF04664 OGFr_N > GO:membrane ; GO:0016020
Pfam:PF04666 Glyco_transf_54 > GO:transferase activity, transferring hexosyl groups ; GO:0016758
Pfam:PF04666 Glyco_transf_54 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF04666 Glyco_transf_54 > GO:membrane ; GO:0016020
Pfam:PF04670 Gtr1_RagA > GO:GTP binding ; GO:0005525
Pfam:PF04670 Gtr1_RagA > GO:nucleus ; GO:0005634
Pfam:PF04670 Gtr1_RagA > GO:cytoplasm ; GO:0005737
Pfam:PF04673 Cyclase_polyket > GO:polyketide biosynthetic process ; GO:0030639
Pfam:PF04675 DNA_ligase_A_N > GO:DNA binding ; GO:0003677
Pfam:PF04675 DNA_ligase_A_N > GO:DNA ligase (ATP) activity ; GO:0003910
Pfam:PF04675 DNA_ligase_A_N > GO:DNA repair ; GO:0006281
Pfam:PF04675 DNA_ligase_A_N > GO:DNA recombination ; GO:0006310
Pfam:PF04679 DNA_ligase_A_C > GO:DNA ligase (ATP) activity ; GO:0003910
Pfam:PF04679 DNA_ligase_A_C > GO:DNA repair ; GO:0006281
Pfam:PF04679 DNA_ligase_A_C > GO:DNA recombination ; GO:0006310
Pfam:PF04683 Proteasom_Rpn13 > GO:nucleus ; GO:0005634
Pfam:PF04683 Proteasom_Rpn13 > GO:cytoplasm ; GO:0005737
Pfam:PF04684 BAF1_ABF1 > GO:DNA binding ; GO:0003677
Pfam:PF04684 BAF1_ABF1 > GO:chromatin remodeling ; GO:0006338
Pfam:PF04684 BAF1_ABF1 > GO:nucleus ; GO:0005634
Pfam:PF04685 DUF608 > GO:glucosylceramidase activity ; GO:0004348
Pfam:PF04685 DUF608 > GO:sphingolipid metabolic process ; GO:0006665
Pfam:PF04685 DUF608 > GO:integral component of membrane ; GO:0016021
Pfam:PF04687 Microvir_H > GO:viral entry into host cell ; GO:0046718
Pfam:PF04687 Microvir_H > GO:viral capsid ; GO:0019028
Pfam:PF04689 S1FA > GO:DNA binding ; GO:0003677
Pfam:PF04689 S1FA > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04689 S1FA > GO:nucleus ; GO:0005634
Pfam:PF04691 ApoC-I > GO:lipoprotein metabolic process ; GO:0042157
Pfam:PF04691 ApoC-I > GO:extracellular region ; GO:0005576
Pfam:PF04692 PDGF_N > GO:growth factor activity ; GO:0008083
Pfam:PF04692 PDGF_N > GO:membrane ; GO:0016020
Pfam:PF04699 P16-Arc > GO:regulation of actin filament polymerization ; GO:0030833
Pfam:PF04699 P16-Arc > GO:cytoskeleton ; GO:0005856
Pfam:PF04700 Baculo_gp41 > GO:structural molecule activity ; GO:0005198
Pfam:PF04700 Baculo_gp41 > GO:virion ; GO:0019012
Pfam:PF04703 FaeA > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04703 FaeA > GO:pilus ; GO:0009289
Pfam:PF04704 Zfx_Zfy_act > GO:DNA binding ; GO:0003677
Pfam:PF04704 Zfx_Zfy_act > GO:metal ion binding ; GO:0046872
Pfam:PF04704 Zfx_Zfy_act > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04704 Zfx_Zfy_act > GO:nucleus ; GO:0005634
Pfam:PF04705 TSNR_N > GO:rRNA methyltransferase activity ; GO:0008649
Pfam:PF04705 TSNR_N > GO:response to antibiotic ; GO:0046677
Pfam:PF04706 Dickkopf_N > GO:multicellular organismal development ; GO:0007275
Pfam:PF04706 Dickkopf_N > GO:negative regulation of Wnt signaling pathway ; GO:0030178
Pfam:PF04706 Dickkopf_N > GO:extracellular region ; GO:0005576
Pfam:PF04709 AMH_N > GO:growth factor activity ; GO:0008083
Pfam:PF04709 AMH_N > GO:gonad development ; GO:0008406
Pfam:PF04710 Pellino > GO:Toll signaling pathway ; GO:0008063
Pfam:PF04711 ApoA-II > GO:lipid binding ; GO:0008289
Pfam:PF04711 ApoA-II > GO:lipid transport ; GO:0006869
Pfam:PF04711 ApoA-II > GO:lipoprotein metabolic process ; GO:0042157
Pfam:PF04711 ApoA-II > GO:extracellular region ; GO:0005576
Pfam:PF04715 Anth_synt_I_N > GO:oxo-acid-lyase activity ; GO:0016833
Pfam:PF04715 Anth_synt_I_N > GO:biosynthetic process ; GO:0009058
Pfam:PF04716 ETC_C1_NDUFA5 > GO:oxidoreductase activity, acting on NAD(P)H ; GO:0016651
Pfam:PF04716 ETC_C1_NDUFA5 > GO:respiratory electron transport chain ; GO:0022904
Pfam:PF04716 ETC_C1_NDUFA5 > GO:mitochondrial inner membrane ; GO:0005743
Pfam:PF04718 ATP-synt_G > GO:hydrogen ion transmembrane transporter activity ; GO:0015078
Pfam:PF04718 ATP-synt_G > GO:ATP synthesis coupled proton transport ; GO:0015986
Pfam:PF04718 ATP-synt_G > GO:mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0000276
Pfam:PF04719 TAFII28 > GO:transcription initiation from RNA polymerase II promoter ; GO:0006367
Pfam:PF04719 TAFII28 > GO:nucleus ; GO:0005634
Pfam:PF04721 DUF750 > GO:glycoprotein catabolic process ; GO:0006516
Pfam:PF04721 DUF750 > GO:cytoplasm ; GO:0005737
Pfam:PF04722 Ssu72 > GO:phosphoprotein phosphatase activity ; GO:0004721
Pfam:PF04722 Ssu72 > GO:mRNA processing ; GO:0006397
Pfam:PF04722 Ssu72 > GO:nucleus ; GO:0005634
Pfam:PF04723 GRDA > GO:glycine reductase activity ; GO:0030699
Pfam:PF04723 GRDA > GO:oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor ; GO:0050485
Pfam:PF04723 GRDA > GO:oxidation-reduction process ; GO:0055114
Pfam:PF04723 GRDA > GO:glycine reductase complex ; GO:0030700
Pfam:PF04724 Glyco_transf_17 > GO:beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity ; GO:0003830
Pfam:PF04724 Glyco_transf_17 > GO:protein N-linked glycosylation ; GO:0006487
Pfam:PF04724 Glyco_transf_17 > GO:membrane ; GO:0016020
Pfam:PF04725 PsbR > GO:photosynthesis ; GO:0015979
Pfam:PF04725 PsbR > GO:photosystem II ; GO:0009523
Pfam:PF04725 PsbR > GO:photosystem II oxygen evolving complex ; GO:0009654
Pfam:PF04725 PsbR > GO:thylakoid membrane ; GO:0042651
Pfam:PF04726 Microvir_J > GO:DNA binding ; GO:0003677
Pfam:PF04727 ELMO_CED12 > GO:phagocytosis ; GO:0006909
Pfam:PF04727 ELMO_CED12 > GO:cytoskeleton ; GO:0005856
Pfam:PF04728 LPP > GO:outer membrane ; GO:0019867
Pfam:PF04729 ASF1_hist_chap > GO:chromatin assembly or disassembly ; GO:0006333
Pfam:PF04729 ASF1_hist_chap > GO:nucleus ; GO:0005634
Pfam:PF04731 Caudal_act > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04731 Caudal_act > GO:multicellular organismal development ; GO:0007275
Pfam:PF04731 Caudal_act > GO:nucleus ; GO:0005634
Pfam:PF04732 Filament_head > GO:intermediate filament ; GO:0005882
Pfam:PF04733 Coatomer_E > GO:structural molecule activity ; GO:0005198
Pfam:PF04733 Coatomer_E > GO:retrograde vesicle-mediated transport, Golgi to ER ; GO:0006890
Pfam:PF04735 Baculo_helicase > GO:DNA helicase activity ; GO:0003678
Pfam:PF04735 Baculo_helicase > GO:viral genome replication ; GO:0019079
Pfam:PF04736 Eclosion > GO:ecdysis-triggering hormone activity ; GO:0008255
Pfam:PF04736 Eclosion > GO:neuropeptide signaling pathway ; GO:0007218
Pfam:PF04736 Eclosion > GO:ecdysis, chitin-based cuticle ; GO:0018990
Pfam:PF04739 AMPKBI > GO:protein binding ; GO:0005515
Pfam:PF04741 InvH > GO:pathogenesis ; GO:0009405
Pfam:PF04750 Far-17a_AIG1 > GO:integral component of membrane ; GO:0016021
Pfam:PF04758 Ribosomal_S30 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF04758 Ribosomal_S30 > GO:translation ; GO:0006412
Pfam:PF04758 Ribosomal_S30 > GO:intracellular ; GO:0005622
Pfam:PF04758 Ribosomal_S30 > GO:ribosome ; GO:0005840
Pfam:PF04767 Pox_F17 > GO:DNA binding ; GO:0003677
Pfam:PF04767 Pox_F17 > GO:viral protein processing ; GO:0019082
Pfam:PF04769 MAT_Alpha1 > GO:mating pheromone activity ; GO:0000772
Pfam:PF04769 MAT_Alpha1 > GO:DNA binding ; GO:0003677
Pfam:PF04769 MAT_Alpha1 > GO:positive regulation of mating-type specific transcription, DNA-templated ; GO:0045895
Pfam:PF04769 MAT_Alpha1 > GO:nucleus ; GO:0005634
Pfam:PF04771 CAV_VP3 > GO:induction by virus of host apoptotic process ; GO:0019051
Pfam:PF04771 CAV_VP3 > GO:host cell nucleus ; GO:0042025
Pfam:PF04772 Flu_B_M2 > GO:proton transport ; GO:0015992
Pfam:PF04772 Flu_B_M2 > GO:integral component of membrane ; GO:0016021
Pfam:PF04777 Evr1_Alr > GO:thiol oxidase activity ; GO:0016972
Pfam:PF04777 Evr1_Alr > GO:oxidation-reduction process ; GO:0055114
Pfam:PF04785 Rhabdo_M2 > GO:viral process ; GO:0016032
Pfam:PF04785 Rhabdo_M2 > GO:viral envelope ; GO:0019031
Pfam:PF04790 Sarcoglycan_1 > GO:sarcoglycan complex ; GO:0016012
Pfam:PF04790 Sarcoglycan_1 > GO:integral component of membrane ; GO:0016021
Pfam:PF04792 LcrV > GO:pathogenesis ; GO:0009405
Pfam:PF04792 LcrV > GO:extracellular region ; GO:0005576
Pfam:PF04795 PAPA-1 > GO:Ino80 complex ; GO:0031011
Pfam:PF04799 Fzo_mitofusin > GO:GTPase activity ; GO:0003924
Pfam:PF04799 Fzo_mitofusin > GO:GTP catabolic process ; GO:0006184
Pfam:PF04799 Fzo_mitofusin > GO:mitochondrial fusion ; GO:0008053
Pfam:PF04799 Fzo_mitofusin > GO:mitochondrial outer membrane ; GO:0005741
Pfam:PF04799 Fzo_mitofusin > GO:integral component of membrane ; GO:0016021
Pfam:PF04800 ETC_C1_NDUFA4 > GO:oxidoreductase activity, acting on NAD(P)H ; GO:0016651
Pfam:PF04800 ETC_C1_NDUFA4 > GO:electron transport chain ; GO:0022900
Pfam:PF04801 Sin_N > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF04801 Sin_N > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04801 Sin_N > GO:nucleus ; GO:0005634
Pfam:PF04805 Pox_E10 > GO:thiol oxidase activity ; GO:0016972
Pfam:PF04805 Pox_E10 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF04810 zf-Sec23_Sec24 > GO:zinc ion binding ; GO:0008270
Pfam:PF04810 zf-Sec23_Sec24 > GO:intracellular protein transport ; GO:0006886
Pfam:PF04810 zf-Sec23_Sec24 > GO:ER to Golgi vesicle-mediated transport ; GO:0006888
Pfam:PF04810 zf-Sec23_Sec24 > GO:COPII vesicle coat ; GO:0030127
Pfam:PF04811 Sec23_trunk > GO:intracellular protein transport ; GO:0006886
Pfam:PF04811 Sec23_trunk > GO:ER to Golgi vesicle-mediated transport ; GO:0006888
Pfam:PF04811 Sec23_trunk > GO:COPII vesicle coat ; GO:0030127
Pfam:PF04812 HNF-1B_C > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF04812 HNF-1B_C > GO:nucleus ; GO:0005634
Pfam:PF04813 HNF-1A_C > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF04813 HNF-1A_C > GO:nucleus ; GO:0005634
Pfam:PF04814 HNF-1_N > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF04814 HNF-1_N > GO:nucleus ; GO:0005634
Pfam:PF04815 Sec23_helical > GO:intracellular protein transport ; GO:0006886
Pfam:PF04815 Sec23_helical > GO:ER to Golgi vesicle-mediated transport ; GO:0006888
Pfam:PF04815 Sec23_helical > GO:COPII vesicle coat ; GO:0030127
Pfam:PF04816 DUF633 > GO:tRNA (adenine-N1-)-methyltransferase activity ; GO:0016429
Pfam:PF04824 Rad21_Rec8 > GO:nuclear chromosome ; GO:0000228
Pfam:PF04825 Rad21_Rec8_N > GO:protein binding ; GO:0005515
Pfam:PF04827 Plant_tran > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF04828 GFA > GO:carbon-sulfur lyase activity ; GO:0016846
Pfam:PF04828 GFA > GO:metabolic process ; GO:0008152
Pfam:PF04831 Popeye > GO:membrane ; GO:0016020
Pfam:PF04833 COBRA > GO:cellulose microfibril organization ; GO:0010215
Pfam:PF04833 COBRA > GO:cell growth ; GO:0016049
Pfam:PF04833 COBRA > GO:anchored component of membrane ; GO:0031225
Pfam:PF04834 Adeno_E3_14_5 > GO:regulation of signal transduction ; GO:0009966
Pfam:PF04834 Adeno_E3_14_5 > GO:integral component of membrane ; GO:0016021
Pfam:PF04838 Baculo_LEF5 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF04839 PSRP-3_Ycf65 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF04839 PSRP-3_Ycf65 > GO:translation ; GO:0006412
Pfam:PF04839 PSRP-3_Ycf65 > GO:ribosome ; GO:0005840
Pfam:PF04840 Vps16_C > GO:intracellular protein transport ; GO:0006886
Pfam:PF04840 Vps16_C > GO:cytoplasm ; GO:0005737
Pfam:PF04841 Vps16_N > GO:intracellular protein transport ; GO:0006886
Pfam:PF04841 Vps16_N > GO:cytoplasm ; GO:0005737
Pfam:PF04847 Calcipressin > GO:calcium-mediated signaling ; GO:0019722
Pfam:PF04848 Pox_A22 > GO:magnesium ion binding ; GO:0000287
Pfam:PF04848 Pox_A22 > GO:four-way junction DNA binding ; GO:0000400
Pfam:PF04848 Pox_A22 > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF04848 Pox_A22 > GO:DNA repair ; GO:0006281
Pfam:PF04848 Pox_A22 > GO:DNA recombination ; GO:0006310
Pfam:PF04850 Baculo_E66 > GO:viral envelope ; GO:0019031
Pfam:PF04851 ResIII > GO:DNA binding ; GO:0003677
Pfam:PF04851 ResIII > GO:ATP binding ; GO:0005524
Pfam:PF04851 ResIII > GO:hydrolase activity ; GO:0016787
Pfam:PF04855 SNF5 > GO:chromatin remodeling ; GO:0006338
Pfam:PF04855 SNF5 > GO:nuclear chromosome ; GO:0000228
Pfam:PF04856 Securin > GO:chromosome organization ; GO:0051276
Pfam:PF04856 Securin > GO:nucleus ; GO:0005634
Pfam:PF04856 Securin > GO:cytoplasm ; GO:0005737
Pfam:PF04857 CAF1 > GO:nucleus ; GO:0005634
Pfam:PF04858 TH1 > GO:negative regulation of transcription, DNA-templated ; GO:0045892
Pfam:PF04858 TH1 > GO:nucleus ; GO:0005634
Pfam:PF04863 EGF_alliinase > GO:carbon-sulfur lyase activity ; GO:0016846
Pfam:PF04864 Alliinase_C > GO:carbon-sulfur lyase activity ; GO:0016846
Pfam:PF04868 PDE6_gamma > GO:3',5'-cyclic-nucleotide phosphodiesterase activity ; GO:0004114
Pfam:PF04868 PDE6_gamma > GO:cGMP binding ; GO:0030553
Pfam:PF04868 PDE6_gamma > GO:visual perception ; GO:0007601
Pfam:PF04869 Uso1_p115_head > GO:intracellular protein transport ; GO:0006886
Pfam:PF04869 Uso1_p115_head > GO:vesicle fusion with Golgi apparatus ; GO:0048280
Pfam:PF04869 Uso1_p115_head > GO:Golgi membrane ; GO:0000139
Pfam:PF04869 Uso1_p115_head > GO:cytoplasm ; GO:0005737
Pfam:PF04871 Uso1_p115_C > GO:protein transporter activity ; GO:0008565
Pfam:PF04871 Uso1_p115_C > GO:intracellular protein transport ; GO:0006886
Pfam:PF04871 Uso1_p115_C > GO:cytoplasm ; GO:0005737
Pfam:PF04871 Uso1_p115_C > GO:membrane ; GO:0016020
Pfam:PF04873 EIN3 > GO:nucleus ; GO:0005634
Pfam:PF04879 Molybdop_Fe4S4 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF04879 Molybdop_Fe4S4 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF04881 Adeno_GP19K > GO:mannose binding ; GO:0005537
Pfam:PF04881 Adeno_GP19K > GO:regulation of defense response to virus by virus ; GO:0050690
Pfam:PF04882 Peroxin-3 > GO:peroxisome organization ; GO:0007031
Pfam:PF04882 Peroxin-3 > GO:integral component of peroxisomal membrane ; GO:0005779
Pfam:PF04888 SseC > GO:pathogenesis ; GO:0009405
Pfam:PF04889 Cwf_Cwc_15 > GO:mRNA splicing, via spliceosome ; GO:0000398
Pfam:PF04889 Cwf_Cwc_15 > GO:spliceosomal complex ; GO:0005681
Pfam:PF04891 NifQ > GO:molybdenum ion binding ; GO:0030151
Pfam:PF04891 NifQ > GO:nitrogen fixation ; GO:0009399
Pfam:PF04893 Yip1 > GO:membrane ; GO:0016020
Pfam:PF04898 Glu_syn_central > GO:glutamate synthase activity ; GO:0015930
Pfam:PF04898 Glu_syn_central > GO:nitrogen compound metabolic process ; GO:0006807
Pfam:PF04898 Glu_syn_central > GO:oxidation-reduction process ; GO:0055114
Pfam:PF04900 Fcf1 > GO:small-subunit processome ; GO:0032040
Pfam:PF04901 RAMP > GO:protein transporter activity ; GO:0008565
Pfam:PF04901 RAMP > GO:intracellular protein transport ; GO:0006886
Pfam:PF04901 RAMP > GO:regulation of G-protein coupled receptor protein signaling pathway ; GO:0008277
Pfam:PF04901 RAMP > GO:integral component of membrane ; GO:0016021
Pfam:PF04902 Nab1 > GO:negative regulation of transcription, DNA-templated ; GO:0045892
Pfam:PF04902 Nab1 > GO:nucleus ; GO:0005634
Pfam:PF04904 NCD1 > GO:negative regulation of transcription, DNA-templated ; GO:0045892
Pfam:PF04904 NCD1 > GO:nucleus ; GO:0005634
Pfam:PF04905 NCD2 > GO:negative regulation of transcription, DNA-templated ; GO:0045892
Pfam:PF04905 NCD2 > GO:nucleus ; GO:0005634
Pfam:PF04909 Amidohydro_2 > GO:catalytic activity ; GO:0003824
Pfam:PF04909 Amidohydro_2 > GO:metabolic process ; GO:0008152
Pfam:PF04911 ATP-synt_J > GO:hydrogen ion transmembrane transporter activity ; GO:0015078
Pfam:PF04911 ATP-synt_J > GO:ATP synthesis coupled proton transport ; GO:0015986
Pfam:PF04911 ATP-synt_J > GO:proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0045263
Pfam:PF04921 XAP5 > GO:nucleus ; GO:0005634
Pfam:PF04922 DIE2_ALG10 > GO:transferase activity, transferring hexosyl groups ; GO:0016758
Pfam:PF04922 DIE2_ALG10 > GO:integral component of membrane ; GO:0016021
Pfam:PF04923 Ninjurin > GO:cell adhesion ; GO:0007155
Pfam:PF04923 Ninjurin > GO:tissue regeneration ; GO:0042246
Pfam:PF04923 Ninjurin > GO:integral component of membrane ; GO:0016021
Pfam:PF04926 PAP_RNA-bind > GO:RNA binding ; GO:0003723
Pfam:PF04926 PAP_RNA-bind > GO:polynucleotide adenylyltransferase activity ; GO:0004652
Pfam:PF04926 PAP_RNA-bind > GO:RNA polyadenylation ; GO:0043631
Pfam:PF04926 PAP_RNA-bind > GO:nucleus ; GO:0005634
Pfam:PF04928 PAP_central > GO:polynucleotide adenylyltransferase activity ; GO:0004652
Pfam:PF04928 PAP_central > GO:RNA polyadenylation ; GO:0043631
Pfam:PF04931 DNA_pol_phi > GO:DNA binding ; GO:0003677
Pfam:PF04931 DNA_pol_phi > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF04931 DNA_pol_phi > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04934 Med6 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF04934 Med6 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF04934 Med6 > GO:mediator complex ; GO:0016592
Pfam:PF04939 RRS1 > GO:ribosome biogenesis ; GO:0042254
Pfam:PF04939 RRS1 > GO:nucleus ; GO:0005634
Pfam:PF04940 BLUF > GO:blue light photoreceptor activity ; GO:0009882
Pfam:PF04940 BLUF > GO:FAD binding ; GO:0071949
Pfam:PF04941 LEF-8 > GO:DNA binding ; GO:0003677
Pfam:PF04941 LEF-8 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF04941 LEF-8 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04947 Pox_VLTF3 > GO:regulation of viral transcription ; GO:0046782
Pfam:PF04952 AstE_AspA > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF04952 AstE_AspA > GO:metabolic process ; GO:0008152
Pfam:PF04958 AstA > GO:arginine N-succinyltransferase activity ; GO:0008791
Pfam:PF04958 AstA > GO:arginine catabolic process ; GO:0006527
Pfam:PF04960 Glutaminase > GO:glutaminase activity ; GO:0004359
Pfam:PF04960 Glutaminase > GO:glutamine metabolic process ; GO:0006541
Pfam:PF04961 FTCD_C > GO:catalytic activity ; GO:0003824
Pfam:PF04961 FTCD_C > GO:cellular metabolic process ; GO:0044237
Pfam:PF04962 KduI > GO:intramolecular oxidoreductase activity, interconverting aldoses and ketoses ; GO:0016861
Pfam:PF04962 KduI > GO:metabolic process ; GO:0008152
Pfam:PF04963 Sigma54_CBD > GO:DNA binding ; GO:0003677
Pfam:PF04963 Sigma54_CBD > GO:DNA-templated transcription, initiation ; GO:0006352
Pfam:PF04966 OprB > GO:transporter activity ; GO:0005215
Pfam:PF04966 OprB > GO:transport ; GO:0006810
Pfam:PF04966 OprB > GO:integral component of membrane ; GO:0016021
Pfam:PF04973 NMN_transporter > GO:nicotinamide riboside transmembrane transporter activity ; GO:0034257
Pfam:PF04973 NMN_transporter > GO:nicotinamide riboside transport ; GO:0034258
Pfam:PF04973 NMN_transporter > GO:membrane ; GO:0016020
Pfam:PF04976 DmsC > GO:anaerobic electron transport chain ; GO:0019645
Pfam:PF04976 DmsC > GO:integral component of membrane ; GO:0016021
Pfam:PF04977 DivIC > GO:cell cycle ; GO:0007049
Pfam:PF04979 IPP-2 > GO:protein phosphatase inhibitor activity ; GO:0004864
Pfam:PF04979 IPP-2 > GO:regulation of signal transduction ; GO:0009966
Pfam:PF04979 IPP-2 > GO:regulation of phosphoprotein phosphatase activity ; GO:0043666
Pfam:PF04983 RNA_pol_Rpb1_3 > GO:DNA binding ; GO:0003677
Pfam:PF04983 RNA_pol_Rpb1_3 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF04983 RNA_pol_Rpb1_3 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04986 Y2_Tnp > GO:DNA binding ; GO:0003677
Pfam:PF04986 Y2_Tnp > GO:transposase activity ; GO:0004803
Pfam:PF04986 Y2_Tnp > GO:transposition, DNA-mediated ; GO:0006313
Pfam:PF04987 PigN > GO:transferase activity ; GO:0016740
Pfam:PF04987 PigN > GO:GPI anchor biosynthetic process ; GO:0006506
Pfam:PF04987 PigN > GO:endoplasmic reticulum membrane ; GO:0005789
Pfam:PF04988 AKAP95 > GO:DNA binding ; GO:0003677
Pfam:PF04988 AKAP95 > GO:nucleus ; GO:0005634
Pfam:PF04989 CmcI > GO:methyltransferase activity ; GO:0008168
Pfam:PF04989 CmcI > GO:lipid biosynthetic process ; GO:0008610
Pfam:PF04990 RNA_pol_Rpb1_7 > GO:DNA binding ; GO:0003677
Pfam:PF04990 RNA_pol_Rpb1_7 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF04990 RNA_pol_Rpb1_7 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04992 RNA_pol_Rpb1_6 > GO:DNA binding ; GO:0003677
Pfam:PF04992 RNA_pol_Rpb1_6 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF04992 RNA_pol_Rpb1_6 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04995 CcmD > GO:heme transport ; GO:0015886
Pfam:PF04995 CcmD > GO:cytochrome complex assembly ; GO:0017004
Pfam:PF04995 CcmD > GO:integral component of membrane ; GO:0016021
Pfam:PF04996 AstB > GO:N-succinylarginine dihydrolase activity ; GO:0009015
Pfam:PF04996 AstB > GO:arginine metabolic process ; GO:0006525
Pfam:PF04997 RNA_pol_Rpb1_1 > GO:DNA binding ; GO:0003677
Pfam:PF04997 RNA_pol_Rpb1_1 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF04997 RNA_pol_Rpb1_1 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04998 RNA_pol_Rpb1_5 > GO:DNA binding ; GO:0003677
Pfam:PF04998 RNA_pol_Rpb1_5 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF04998 RNA_pol_Rpb1_5 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF04999 FtsL > GO:cell cycle ; GO:0007049
Pfam:PF04999 FtsL > GO:cell division ; GO:0051301
Pfam:PF04999 FtsL > GO:integral component of membrane ; GO:0016021
Pfam:PF05000 RNA_pol_Rpb1_4 > GO:DNA binding ; GO:0003677
Pfam:PF05000 RNA_pol_Rpb1_4 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF05000 RNA_pol_Rpb1_4 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF05001 RNA_pol_Rpb1_R > GO:DNA binding ; GO:0003677
Pfam:PF05001 RNA_pol_Rpb1_R > GO:transcription from RNA polymerase II promoter ; GO:0006366
Pfam:PF05001 RNA_pol_Rpb1_R > GO:DNA-directed RNA polymerase II, core complex ; GO:0005665
Pfam:PF05007 Mannosyl_trans > GO:transferase activity, transferring hexosyl groups ; GO:0016758
Pfam:PF05007 Mannosyl_trans > GO:GPI anchor biosynthetic process ; GO:0006506
Pfam:PF05007 Mannosyl_trans > GO:endoplasmic reticulum membrane ; GO:0005789
Pfam:PF05007 Mannosyl_trans > GO:integral component of membrane ; GO:0016021
Pfam:PF05008 V-SNARE > GO:intracellular protein transport ; GO:0006886
Pfam:PF05008 V-SNARE > GO:membrane ; GO:0016020
Pfam:PF05009 EBV-NA3 > GO:viral process ; GO:0016032
Pfam:PF05009 EBV-NA3 > GO:host cell nucleus ; GO:0042025
Pfam:PF05011 DBR1 > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF05011 DBR1 > GO:mRNA processing ; GO:0006397
Pfam:PF05014 Nuc_deoxyrib_tr > GO:nucleoside deoxyribosyltransferase activity ; GO:0050144
Pfam:PF05014 Nuc_deoxyrib_tr > GO:deoxyribonucleoside 5'-monophosphate N-glycosidase activity ; GO:0070694
Pfam:PF05014 Nuc_deoxyrib_tr > GO:deoxyribonucleoside monophosphate catabolic process ; GO:0009159
Pfam:PF05019 Coq4 > GO:ubiquinone biosynthetic process ; GO:0006744
Pfam:PF05023 Phytochelatin > GO:glutathione gamma-glutamylcysteinyltransferase activity ; GO:0016756
Pfam:PF05023 Phytochelatin > GO:metal ion binding ; GO:0046872
Pfam:PF05023 Phytochelatin > GO:response to metal ion ; GO:0010038
Pfam:PF05023 Phytochelatin > GO:phytochelatin biosynthetic process ; GO:0046938
Pfam:PF05024 Gpi1 > GO:phosphatidylinositol N-acetylglucosaminyltransferase activity ; GO:0017176
Pfam:PF05024 Gpi1 > GO:GPI anchor biosynthetic process ; GO:0006506
Pfam:PF05024 Gpi1 > GO:integral component of membrane ; GO:0016021
Pfam:PF05025 RbsD_FucU > GO:isomerase activity ; GO:0016853
Pfam:PF05025 RbsD_FucU > GO:monosaccharide binding ; GO:0048029
Pfam:PF05025 RbsD_FucU > GO:monosaccharide metabolic process ; GO:0005996
Pfam:PF05026 DCP2 > GO:RNA binding ; GO:0003723
Pfam:PF05026 DCP2 > GO:hydrolase activity ; GO:0016787
Pfam:PF05026 DCP2 > GO:manganese ion binding ; GO:0030145
Pfam:PF05028 PARG_cat > GO:poly(ADP-ribose) glycohydrolase activity ; GO:0004649
Pfam:PF05028 PARG_cat > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF05033 Pre-SET > GO:zinc ion binding ; GO:0008270
Pfam:PF05033 Pre-SET > GO:histone-lysine N-methyltransferase activity ; GO:0018024
Pfam:PF05033 Pre-SET > GO:histone lysine methylation ; GO:0034968
Pfam:PF05033 Pre-SET > GO:nucleus ; GO:0005634
Pfam:PF05035 DGOK > GO:2-dehydro-3-deoxygalactonokinase activity ; GO:0008671
Pfam:PF05035 DGOK > GO:D-galactonate catabolic process ; GO:0034194
Pfam:PF05038 Cytochrom_B558a > GO:heme binding ; GO:0020037
Pfam:PF05039 Agouti > GO:hormone-mediated signaling pathway ; GO:0009755
Pfam:PF05039 Agouti > GO:extracellular region ; GO:0005576
Pfam:PF05041 Pecanex_C > GO:integral component of membrane ; GO:0016021
Pfam:PF05044 HPD > GO:DNA binding ; GO:0003677
Pfam:PF05046 Img2 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF05046 Img2 > GO:translation ; GO:0006412
Pfam:PF05046 Img2 > GO:intracellular ; GO:0005622
Pfam:PF05046 Img2 > GO:ribosome ; GO:0005840
Pfam:PF05049 IIGP > GO:GTP binding ; GO:0005525
Pfam:PF05049 IIGP > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF05049 IIGP > GO:membrane ; GO:0016020
Pfam:PF05051 COX17 > GO:copper ion binding ; GO:0005507
Pfam:PF05051 COX17 > GO:copper chaperone activity ; GO:0016531
Pfam:PF05051 COX17 > GO:copper ion transport ; GO:0006825
Pfam:PF05051 COX17 > GO:mitochondrial intermembrane space ; GO:0005758
Pfam:PF05052 MerE > GO:mercury ion transmembrane transporter activity ; GO:0015097
Pfam:PF05052 MerE > GO:mercury ion transport ; GO:0015694
Pfam:PF05052 MerE > GO:membrane ; GO:0016020
Pfam:PF05053 Menin > GO:nucleus ; GO:0005634
Pfam:PF05059 Orbi_VP4 > GO:viral capsid ; GO:0019028
Pfam:PF05060 MGAT2 > GO:alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity ; GO:0008455
Pfam:PF05060 MGAT2 > GO:oligosaccharide biosynthetic process ; GO:0009312
Pfam:PF05060 MGAT2 > GO:Golgi stack ; GO:0005795
Pfam:PF05060 MGAT2 > GO:integral component of membrane ; GO:0016021
Pfam:PF05063 MT-A70 > GO:methyltransferase activity ; GO:0008168
Pfam:PF05063 MT-A70 > GO:nucleobase-containing compound metabolic process ; GO:0006139
Pfam:PF05066 HARE-HTH > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF05066 HARE-HTH > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF05072 Herpes_UL43 > GO:membrane ; GO:0016020
Pfam:PF05072 Herpes_UL43 > GO:viral tegument ; GO:0019033
Pfam:PF05073 Baculo_p24 > GO:viral capsid ; GO:0019028
Pfam:PF05083 LST1 > GO:cell morphogenesis ; GO:0000902
Pfam:PF05083 LST1 > GO:immune response ; GO:0006955
Pfam:PF05083 LST1 > GO:membrane ; GO:0016020
Pfam:PF05087 Rota_VP2 > GO:RNA binding ; GO:0003723
Pfam:PF05087 Rota_VP2 > GO:viral nucleocapsid ; GO:0019013
Pfam:PF05088 Bac_GDH > GO:glutamate dehydrogenase (NAD+) activity ; GO:0004352
Pfam:PF05088 Bac_GDH > GO:glutamate catabolic process to 2-oxoglutarate ; GO:0019551
Pfam:PF05090 VKG_Carbox > GO:gamma-glutamyl carboxylase activity ; GO:0008488
Pfam:PF05090 VKG_Carbox > GO:peptidyl-glutamic acid carboxylation ; GO:0017187
Pfam:PF05091 eIF-3_zeta > GO:translation initiation factor activity ; GO:0003743
Pfam:PF05091 eIF-3_zeta > GO:cytoplasm ; GO:0005737
Pfam:PF05091 eIF-3_zeta > GO:eukaryotic translation initiation factor 3 complex ; GO:0005852
Pfam:PF05093 CIAPIN1 > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF05093 CIAPIN1 > GO:iron-sulfur cluster assembly ; GO:0016226
Pfam:PF05093 CIAPIN1 > GO:cytoplasm ; GO:0005737
Pfam:PF05094 LEF-9 > GO:viral transcription ; GO:0019083
Pfam:PF05098 LEF-4 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF05104 Rib_recp_KP_reg > GO:protein transport ; GO:0015031
Pfam:PF05104 Rib_recp_KP_reg > GO:integral component of endoplasmic reticulum membrane ; GO:0030176
Pfam:PF05109 Herpes_BLLF1 > GO:viral life cycle ; GO:0019058
Pfam:PF05109 Herpes_BLLF1 > GO:viral envelope ; GO:0019031
Pfam:PF05111 Amelin > GO:structural constituent of tooth enamel ; GO:0030345
Pfam:PF05111 Amelin > GO:odontogenesis of dentin-containing tooth ; GO:0042475
Pfam:PF05112 Baculo_p47 > GO:regulation of viral transcription ; GO:0046782
Pfam:PF05115 PetL > GO:electron carrier activity ; GO:0009055
Pfam:PF05115 PetL > GO:cytochrome b6f complex ; GO:0009512
Pfam:PF05118 Asp_Arg_Hydrox > GO:peptidyl-amino acid modification ; GO:0018193
Pfam:PF05121 GvpK > GO:gas vesicle organization ; GO:0031412
Pfam:PF05125 Phage_cap_P2 > GO:viral capsid ; GO:0019028
Pfam:PF05130 FlgN > GO:bacterial-type flagellum assembly ; GO:0044780
Pfam:PF05132 RNA_pol_Rpc4 > GO:DNA binding ; GO:0003677
Pfam:PF05132 RNA_pol_Rpc4 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF05132 RNA_pol_Rpc4 > GO:transcription from RNA polymerase III promoter ; GO:0006383
Pfam:PF05132 RNA_pol_Rpc4 > GO:DNA-directed RNA polymerase III complex ; GO:0005666
Pfam:PF05136 Phage_portal_2 > GO:DNA binding ; GO:0003677
Pfam:PF05136 Phage_portal_2 > GO:viral capsid ; GO:0019028
Pfam:PF05139 Erythro_esteras > GO:response to antibiotic ; GO:0046677
Pfam:PF05144 Phage_CRI > GO:DNA replication ; GO:0006260
Pfam:PF05145 AmoA > GO:regulation of gene expression ; GO:0010468
Pfam:PF05145 AmoA > GO:integral component of membrane ; GO:0016021
Pfam:PF05148 Methyltransf_8 > GO:methyltransferase activity ; GO:0008168
Pfam:PF05149 Flagellar_rod > GO:calmodulin binding ; GO:0005516
Pfam:PF05149 Flagellar_rod > GO:motile cilium ; GO:0031514
Pfam:PF05151 PsbM > GO:photosynthesis ; GO:0015979
Pfam:PF05151 PsbM > GO:photosynthesis, light reaction ; GO:0019684
Pfam:PF05151 PsbM > GO:photosystem II ; GO:0009523
Pfam:PF05151 PsbM > GO:integral component of membrane ; GO:0016021
Pfam:PF05153 DUF706 > GO:iron ion binding ; GO:0005506
Pfam:PF05153 DUF706 > GO:inositol oxygenase activity ; GO:0050113
Pfam:PF05153 DUF706 > GO:inositol catabolic process ; GO:0019310
Pfam:PF05153 DUF706 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF05153 DUF706 > GO:cytoplasm ; GO:0005737
Pfam:PF05155 Phage_X > GO:DNA replication ; GO:0006260
Pfam:PF05157 T2SE_Nter > GO:ATP binding ; GO:0005524
Pfam:PF05157 T2SE_Nter > GO:transport ; GO:0006810
Pfam:PF05158 RNA_pol_Rpc34 > GO:DNA binding ; GO:0003677
Pfam:PF05158 RNA_pol_Rpc34 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF05158 RNA_pol_Rpc34 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF05159 Capsule_synth > GO:polysaccharide biosynthetic process ; GO:0000271
Pfam:PF05159 Capsule_synth > GO:polysaccharide transport ; GO:0015774
Pfam:PF05162 Ribosomal_L41 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF05162 Ribosomal_L41 > GO:translation ; GO:0006412
Pfam:PF05162 Ribosomal_L41 > GO:ribosome ; GO:0005840
Pfam:PF05165 GGDN > GO:GTP cyclohydrolase activity ; GO:0003933
Pfam:PF05165 GGDN > GO:biosynthetic process ; GO:0009058
Pfam:PF05171 HemS > GO:iron ion transport ; GO:0006826
Pfam:PF05173 DapB_C > GO:4-hydroxy-tetrahydrodipicolinate reductase ; GO:0008839
Pfam:PF05173 DapB_C > GO:lysine biosynthetic process via diaminopimelate ; GO:0009089
Pfam:PF05173 DapB_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF05175 MTS > GO:methyltransferase activity ; GO:0008168
Pfam:PF05176 ATP-synt_10 > GO:mitochondrial proton-transporting ATP synthase complex assembly ; GO:0033615
Pfam:PF05176 ATP-synt_10 > GO:mitochondrial inner membrane ; GO:0005743
Pfam:PF05180 zf-DNL > GO:zinc ion binding ; GO:0008270
Pfam:PF05183 RdRP > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF05184 SapB_1 > GO:lipid metabolic process ; GO:0006629
Pfam:PF05185 PRMT5 > GO:methyltransferase activity ; GO:0008168
Pfam:PF05185 PRMT5 > GO:protein methylation ; GO:0006479
Pfam:PF05187 ETF_QO > GO:electron-transferring-flavoprotein dehydrogenase activity ; GO:0004174
Pfam:PF05187 ETF_QO > GO:oxidation-reduction process ; GO:0055114
Pfam:PF05188 MutS_II > GO:ATP binding ; GO:0005524
Pfam:PF05188 MutS_II > GO:mismatched DNA binding ; GO:0030983
Pfam:PF05188 MutS_II > GO:mismatch repair ; GO:0006298
Pfam:PF05190 MutS_IV > GO:ATP binding ; GO:0005524
Pfam:PF05190 MutS_IV > GO:mismatched DNA binding ; GO:0030983
Pfam:PF05190 MutS_IV > GO:mismatch repair ; GO:0006298
Pfam:PF05191 ADK_lid > GO:adenylate kinase activity ; GO:0004017
Pfam:PF05192 MutS_III > GO:ATP binding ; GO:0005524
Pfam:PF05192 MutS_III > GO:mismatched DNA binding ; GO:0030983
Pfam:PF05192 MutS_III > GO:mismatch repair ; GO:0006298
Pfam:PF05194 UreE_C > GO:nickel cation binding ; GO:0016151
Pfam:PF05194 UreE_C > GO:protein complex assembly ; GO:0006461
Pfam:PF05194 UreE_C > GO:urea metabolic process ; GO:0019627
Pfam:PF05195 AMP_N > GO:aminopeptidase activity ; GO:0004177
Pfam:PF05195 AMP_N > GO:manganese ion binding ; GO:0030145
Pfam:PF05196 PTN_MK_N > GO:growth factor activity ; GO:0008083
Pfam:PF05197 TRIC > GO:cation channel activity ; GO:0005261
Pfam:PF05197 TRIC > GO:monovalent inorganic cation transport ; GO:0015672
Pfam:PF05197 TRIC > GO:membrane ; GO:0016020
Pfam:PF05198 IF3_N > GO:translation initiation factor activity ; GO:0003743
Pfam:PF05198 IF3_N > GO:translational initiation ; GO:0006413
Pfam:PF05199 GMC_oxred_C > GO:oxidoreductase activity, acting on CH-OH group of donors ; GO:0016614
Pfam:PF05199 GMC_oxred_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF05201 GlutR_N > GO:glutamyl-tRNA reductase activity ; GO:0008883
Pfam:PF05201 GlutR_N > GO:NADP binding ; GO:0050661
Pfam:PF05201 GlutR_N > GO:tetrapyrrole biosynthetic process ; GO:0033014
Pfam:PF05201 GlutR_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF05203 Hom_end_hint > GO:protein splicing ; GO:0030908
Pfam:PF05204 Hom_end > GO:DNA binding ; GO:0003677
Pfam:PF05204 Hom_end > GO:endonuclease activity ; GO:0004519
Pfam:PF05204 Hom_end > GO:protein splicing ; GO:0030908
Pfam:PF05206 TRM13 > GO:methyltransferase activity ; GO:0008168
Pfam:PF05206 TRM13 > GO:tRNA processing ; GO:0008033
Pfam:PF05208 ALG3 > GO:transferase activity, transferring hexosyl groups ; GO:0016758
Pfam:PF05208 ALG3 > GO:endoplasmic reticulum ; GO:0005783
Pfam:PF05208 ALG3 > GO:integral component of membrane ; GO:0016021
Pfam:PF05209 MinC_N > GO:regulation of cell division ; GO:0051302
Pfam:PF05210 Sprouty > GO:multicellular organismal development ; GO:0007275
Pfam:PF05210 Sprouty > GO:regulation of signal transduction ; GO:0009966
Pfam:PF05210 Sprouty > GO:membrane ; GO:0016020
Pfam:PF05211 NLBH > GO:cell outer membrane ; GO:0009279
Pfam:PF05215 Spiralin > GO:membrane ; GO:0016020
Pfam:PF05221 AdoHcyase > GO:adenosylhomocysteinase activity ; GO:0004013
Pfam:PF05221 AdoHcyase > GO:one-carbon metabolic process ; GO:0006730
Pfam:PF05223 MecA_N > GO:response to antibiotic ; GO:0046677
Pfam:PF05224 NDT80_PhoG > GO:DNA binding ; GO:0003677
Pfam:PF05225 HTH_psq > GO:DNA binding ; GO:0003677
Pfam:PF05236 TAF4 > GO:DNA-templated transcription, initiation ; GO:0006352
Pfam:PF05236 TAF4 > GO:transcription factor TFIID complex ; GO:0005669
Pfam:PF05238 CENP-N > GO:chromosome segregation ; GO:0007059
Pfam:PF05238 CENP-N > GO:centromere complex assembly ; GO:0034508
Pfam:PF05240 APOBEC_C > GO:zinc ion binding ; GO:0008270
Pfam:PF05240 APOBEC_C > GO:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines ; GO:0016814
Pfam:PF05241 EBP > GO:cholestenol delta-isomerase activity ; GO:0047750
Pfam:PF05241 EBP > GO:sterol metabolic process ; GO:0016125
Pfam:PF05241 EBP > GO:integral component of membrane ; GO:0016021
Pfam:PF05247 FlhD > GO:bacterial-type flagellum assembly ; GO:0044780
Pfam:PF05247 FlhD > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF05261 Tra_M > GO:DNA binding ; GO:0003677
Pfam:PF05261 Tra_M > GO:conjugation ; GO:0000746
Pfam:PF05269 Phage_CII > GO:DNA binding ; GO:0003677
Pfam:PF05269 Phage_CII > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF05270 AbfB > GO:alpha-L-arabinofuranosidase activity ; GO:0046556
Pfam:PF05270 AbfB > GO:L-arabinose metabolic process ; GO:0046373
Pfam:PF05271 Tobravirus_2B > GO:transmission of virus ; GO:0019089
Pfam:PF05273 Pox_RNA_Pol_22 > GO:DNA binding ; GO:0003677
Pfam:PF05273 Pox_RNA_Pol_22 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF05273 Pox_RNA_Pol_22 > GO:viral transcription ; GO:0019083
Pfam:PF05274 Baculo_E25 > GO:viral envelope ; GO:0019031
Pfam:PF05274 Baculo_E25 > GO:host cell nucleus ; GO:0042025
Pfam:PF05275 CopB > GO:copper ion binding ; GO:0005507
Pfam:PF05275 CopB > GO:cellular copper ion homeostasis ; GO:0006878
Pfam:PF05275 CopB > GO:cell outer membrane ; GO:0009279
Pfam:PF05279 Asp-B-Hydro_N > GO:membrane ; GO:0016020
Pfam:PF05280 FlhC > GO:DNA binding ; GO:0003677
Pfam:PF05280 FlhC > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF05280 FlhC > GO:regulation of bacterial-type flagellum assembly ; GO:1902208
Pfam:PF05281 Secretogranin_V > GO:neuropeptide signaling pathway ; GO:0007218
Pfam:PF05281 Secretogranin_V > GO:secretory granule ; GO:0030141
Pfam:PF05292 MCD > GO:malonyl-CoA decarboxylase activity ; GO:0050080
Pfam:PF05292 MCD > GO:fatty acid biosynthetic process ; GO:0006633
Pfam:PF05294 Toxin_5 > GO:pathogenesis ; GO:0009405
Pfam:PF05294 Toxin_5 > GO:extracellular region ; GO:0005576
Pfam:PF05296 TAS2R > GO:G-protein coupled receptor activity ; GO:0004930
Pfam:PF05296 TAS2R > GO:G-protein coupled receptor signaling pathway ; GO:0007186
Pfam:PF05296 TAS2R > GO:sensory perception of taste ; GO:0050909
Pfam:PF05296 TAS2R > GO:integral component of membrane ; GO:0016021
Pfam:PF05297 Herpes_LMP1 > GO:transformation of host cell by virus ; GO:0019087
Pfam:PF05297 Herpes_LMP1 > GO:integral component of membrane ; GO:0016021
Pfam:PF05298 Bombinin > GO:defense response to bacterium ; GO:0042742
Pfam:PF05298 Bombinin > GO:extracellular region ; GO:0005576
Pfam:PF05301 Mec-17 > GO:tubulin N-acetyltransferase activity ; GO:0019799
Pfam:PF05301 Mec-17 > GO:alpha-tubulin acetylation ; GO:0071929
Pfam:PF05307 Bundlin > GO:pilus ; GO:0009289
Pfam:PF05309 TraE > GO:conjugation ; GO:0000746
Pfam:PF05313 Pox_P21 > GO:integral component of membrane ; GO:0016021
Pfam:PF05314 Baculo_ODV-E27 > GO:viral envelope ; GO:0019031
Pfam:PF05316 VAR1 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF05316 VAR1 > GO:translation ; GO:0006412
Pfam:PF05316 VAR1 > GO:mitochondrial ribosome ; GO:0005761
Pfam:PF05318 Tombus_movement > GO:transmission of virus ; GO:0019089
Pfam:PF05320 Pox_RNA_Pol_19 > GO:DNA binding ; GO:0003677
Pfam:PF05320 Pox_RNA_Pol_19 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF05320 Pox_RNA_Pol_19 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF05324 Sperm_Ag_HE2 > GO:extracellular region ; GO:0005576
Pfam:PF05326 SVA > GO:extracellular region ; GO:0005576
Pfam:PF05328 CybS > GO:mitochondrial envelope ; GO:0005740
Pfam:PF05328 CybS > GO:integral component of membrane ; GO:0016021
Pfam:PF05336 DUF718 > GO:racemase and epimerase activity, acting on carbohydrates and derivatives ; GO:0016857
Pfam:PF05336 DUF718 > GO:rhamnose metabolic process ; GO:0019299
Pfam:PF05336 DUF718 > GO:cytoplasm ; GO:0005737
Pfam:PF05337 CSF-1 > GO:cytokine activity ; GO:0005125
Pfam:PF05337 CSF-1 > GO:growth factor activity ; GO:0008083
Pfam:PF05337 CSF-1 > GO:integral component of membrane ; GO:0016021
Pfam:PF05342 Peptidase_M26_N > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF05342 Peptidase_M26_N > GO:zinc ion binding ; GO:0008270
Pfam:PF05342 Peptidase_M26_N > GO:integral component of membrane ; GO:0016021
Pfam:PF05349 GATA-N > GO:DNA binding ; GO:0003677
Pfam:PF05349 GATA-N > GO:zinc ion binding ; GO:0008270
Pfam:PF05349 GATA-N > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF05349 GATA-N > GO:nucleus ; GO:0005634
Pfam:PF05353 Atracotoxin > GO:sodium channel inhibitor activity ; GO:0019871
Pfam:PF05353 Atracotoxin > GO:pathogenesis ; GO:0009405
Pfam:PF05353 Atracotoxin > GO:extracellular region ; GO:0005576
Pfam:PF05354 Phage_attach > GO:virion assembly ; GO:0019068
Pfam:PF05354 Phage_attach > GO:viral capsid ; GO:0019028
Pfam:PF05355 Apo-CII > GO:enzyme activator activity ; GO:0008047
Pfam:PF05355 Apo-CII > GO:lipid metabolic process ; GO:0006629
Pfam:PF05355 Apo-CII > GO:lipid transport ; GO:0006869
Pfam:PF05355 Apo-CII > GO:chylomicron ; GO:0042627
Pfam:PF05361 PP1_inhibitor > GO:regulation of phosphorylation ; GO:0042325
Pfam:PF05361 PP1_inhibitor > GO:cytoplasm ; GO:0005737
Pfam:PF05362 Lon_C > GO:ATP-dependent peptidase activity ; GO:0004176
Pfam:PF05362 Lon_C > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF05362 Lon_C > GO:proteolysis ; GO:0006508
Pfam:PF05363 Herpes_US12 > GO:evasion or tolerance of host defenses by virus ; GO:0019049
Pfam:PF05365 UCR_UQCRX_QCR9 > GO:mitochondrial electron transport, ubiquinol to cytochrome c ; GO:0006122
Pfam:PF05365 UCR_UQCRX_QCR9 > GO:mitochondrial envelope ; GO:0005740
Pfam:PF05365 UCR_UQCRX_QCR9 > GO:mitochondrial respiratory chain complex III ; GO:0005750
Pfam:PF05366 Sarcolipin > GO:enzyme regulator activity ; GO:0030234
Pfam:PF05366 Sarcolipin > GO:membrane ; GO:0016020
Pfam:PF05367 Phage_endo_I > GO:deoxyribonuclease IV (phage-T4-induced) activity ; GO:0008833
Pfam:PF05367 Phage_endo_I > GO:DNA integration ; GO:0015074
Pfam:PF05367 Phage_endo_I > GO:viral process ; GO:0016032
Pfam:PF05369 MtmB > GO:methyltransferase activity ; GO:0008168
Pfam:PF05369 MtmB > GO:methylation ; GO:0032259
Pfam:PF05372 Delta_lysin > GO:hemolysis by symbiont of host erythrocytes ; GO:0019836
Pfam:PF05372 Delta_lysin > GO:extracellular region ; GO:0005576
Pfam:PF05373 Pro_3_hydrox_C > GO:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors ; GO:0016706
Pfam:PF05373 Pro_3_hydrox_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF05374 Mu-conotoxin > GO:sodium channel inhibitor activity ; GO:0019871
Pfam:PF05374 Mu-conotoxin > GO:pathogenesis ; GO:0009405
Pfam:PF05374 Mu-conotoxin > GO:extracellular region ; GO:0005576
Pfam:PF05375 Pacifastin_I > GO:peptidase inhibitor activity ; GO:0030414
Pfam:PF05379 Peptidase_C23 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF05379 Peptidase_C23 > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF05381 Peptidase_C21 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF05381 Peptidase_C21 > GO:viral process ; GO:0016032
Pfam:PF05384 DegS > GO:kinase activity ; GO:0016301
Pfam:PF05384 DegS > GO:signal transduction ; GO:0007165
Pfam:PF05388 Carbpep_Y_N > GO:serine-type carboxypeptidase activity ; GO:0004185
Pfam:PF05388 Carbpep_Y_N > GO:vacuole ; GO:0005773
Pfam:PF05390 KRE9 > GO:(1->6)-beta-D-glucan biosynthetic process ; GO:0006078
Pfam:PF05390 KRE9 > GO:cell wall biogenesis ; GO:0042546
Pfam:PF05392 COX7B > GO:cytochrome-c oxidase activity ; GO:0004129
Pfam:PF05392 COX7B > GO:mitochondrial respiratory chain ; GO:0005746
Pfam:PF05393 Hum_adeno_E3A > GO:integral component of membrane ; GO:0016021
Pfam:PF05394 AvrB_AvrC > GO:pathogenesis ; GO:0009405
Pfam:PF05395 DARPP-32 > GO:protein phosphatase inhibitor activity ; GO:0004864
Pfam:PF05395 DARPP-32 > GO:signal transduction ; GO:0007165
Pfam:PF05396 Phage_T7_Capsid > GO:viral capsid assembly ; GO:0019069
Pfam:PF05397 Med15_fungi > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF05397 Med15_fungi > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF05397 Med15_fungi > GO:mediator complex ; GO:0016592
Pfam:PF05398 PufQ > GO:photosynthesis ; GO:0015979
Pfam:PF05398 PufQ > GO:bacteriochlorophyll biosynthetic process ; GO:0030494
Pfam:PF05399 EVI2A > GO:integral component of membrane ; GO:0016021
Pfam:PF05401 NodS > GO:S-adenosylmethionine-dependent methyltransferase activity ; GO:0008757
Pfam:PF05401 NodS > GO:oligosaccharide biosynthetic process ; GO:0009312
Pfam:PF05401 NodS > GO:nodulation ; GO:0009877
Pfam:PF05404 TRAP-delta > GO:endoplasmic reticulum ; GO:0005783
Pfam:PF05404 TRAP-delta > GO:integral component of membrane ; GO:0016021
Pfam:PF05405 Mt_ATP-synt_B > GO:hydrogen ion transmembrane transporter activity ; GO:0015078
Pfam:PF05405 Mt_ATP-synt_B > GO:ATP synthesis coupled proton transport ; GO:0015986
Pfam:PF05405 Mt_ATP-synt_B > GO:mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0000276
Pfam:PF05407 Peptidase_C27 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF05407 Peptidase_C27 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF05407 Peptidase_C27 > GO:nucleoside-triphosphatase activity ; GO:0017111
Pfam:PF05408 Peptidase_C28 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF05408 Peptidase_C28 > GO:viral process ; GO:0016032
Pfam:PF05408 Peptidase_C28 > GO:viral protein processing ; GO:0019082
Pfam:PF05409 Peptidase_C30 > GO:viral protein processing ; GO:0019082
Pfam:PF05410 Peptidase_C31 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF05411 Peptidase_C32 > GO:cysteine-type peptidase activity ; GO:0008234
Pfam:PF05412 Peptidase_C33 > GO:viral process ; GO:0016032
Pfam:PF05412 Peptidase_C33 > GO:viral protein processing ; GO:0019082
Pfam:PF05413 Peptidase_C34 > GO:RNA binding ; GO:0003723
Pfam:PF05413 Peptidase_C34 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF05413 Peptidase_C34 > GO:ATP binding ; GO:0005524
Pfam:PF05413 Peptidase_C34 > GO:viral genome replication ; GO:0019079
Pfam:PF05416 Peptidase_C37 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF05416 Peptidase_C37 > GO:proteolysis ; GO:0006508
Pfam:PF05417 Peptidase_C41 > GO:viral process ; GO:0016032
Pfam:PF05417 Peptidase_C41 > GO:viral protein processing ; GO:0019082
Pfam:PF05418 Apo-VLDL-II > GO:enzyme inhibitor activity ; GO:0004857
Pfam:PF05418 Apo-VLDL-II > GO:lipid metabolic process ; GO:0006629
Pfam:PF05418 Apo-VLDL-II > GO:chylomicron ; GO:0042627
Pfam:PF05420 BCSC_C > GO:cellulose biosynthetic process ; GO:0030244
Pfam:PF05420 BCSC_C > GO:outer membrane ; GO:0019867
Pfam:PF05424 Duffy_binding > GO:receptor activity ; GO:0004872
Pfam:PF05424 Duffy_binding > GO:pathogenesis ; GO:0009405
Pfam:PF05424 Duffy_binding > GO:integral component of membrane ; GO:0016021
Pfam:PF05425 CopD > GO:integral component of membrane ; GO:0016021
Pfam:PF05426 Alginate_lyase > GO:lyase activity ; GO:0016829
Pfam:PF05426 Alginate_lyase > GO:periplasmic space ; GO:0042597
Pfam:PF05427 FIBP > GO:fibroblast growth factor binding ; GO:0017134
Pfam:PF05430 Methyltransf_30 > GO:oxidoreductase activity, acting on the CH-NH group of donors ; GO:0016645
Pfam:PF05430 Methyltransf_30 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF05431 Toxin_10 > GO:pathogenesis ; GO:0009405
Pfam:PF05432 BSP_II > GO:ossification ; GO:0001503
Pfam:PF05432 BSP_II > GO:cell adhesion ; GO:0007155
Pfam:PF05432 BSP_II > GO:extracellular region ; GO:0005576
Pfam:PF05433 Rick_17kDa_Anti > GO:outer membrane ; GO:0019867
Pfam:PF05434 Tmemb_9 > GO:integral component of membrane ; GO:0016021
Pfam:PF05435 Phi-29_GP3 > GO:DNA replication ; GO:0006260
Pfam:PF05435 Phi-29_GP3 > GO:DNA replication, synthesis of RNA primer ; GO:0006269
Pfam:PF05435 Phi-29_GP3 > GO:protein-DNA covalent cross-linking ; GO:0018142
Pfam:PF05436 MF_alpha_N > GO:mating ; GO:0007618
Pfam:PF05436 MF_alpha_N > GO:extracellular region ; GO:0005576
Pfam:PF05438 TRH > GO:neuropeptide hormone activity ; GO:0005184
Pfam:PF05438 TRH > GO:hormone-mediated signaling pathway ; GO:0009755
Pfam:PF05438 TRH > GO:extracellular region ; GO:0005576
Pfam:PF05439 JTB > GO:integral component of membrane ; GO:0016021
Pfam:PF05440 MtrB > GO:tetrahydromethanopterin S-methyltransferase activity ; GO:0030269
Pfam:PF05440 MtrB > GO:methanogenesis ; GO:0015948
Pfam:PF05440 MtrB > GO:integral component of membrane ; GO:0016021
Pfam:PF05443 ROS_MUCR > GO:DNA binding ; GO:0003677
Pfam:PF05443 ROS_MUCR > GO:zinc ion binding ; GO:0008270
Pfam:PF05443 ROS_MUCR > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF05445 Pox_ser-thr_kin > GO:protein kinase activity ; GO:0004672
Pfam:PF05445 Pox_ser-thr_kin > GO:ATP binding ; GO:0005524
Pfam:PF05450 Nicastrin > GO:protein processing ; GO:0016485
Pfam:PF05450 Nicastrin > GO:integral component of membrane ; GO:0016021
Pfam:PF05452 Clavanin > GO:extracellular region ; GO:0005576
Pfam:PF05453 Toxin_6 > GO:ion channel inhibitor activity ; GO:0008200
Pfam:PF05453 Toxin_6 > GO:pathogenesis ; GO:0009405
Pfam:PF05453 Toxin_6 > GO:extracellular region ; GO:0005576
Pfam:PF05454 DAG1 > GO:cytoskeletal anchoring at plasma membrane ; GO:0007016
Pfam:PF05454 DAG1 > GO:dystrophin-associated glycoprotein complex ; GO:0016010
Pfam:PF05456 eIF_4EBP > GO:eukaryotic initiation factor 4E binding ; GO:0008190
Pfam:PF05456 eIF_4EBP > GO:negative regulation of translational initiation ; GO:0045947
Pfam:PF05459 Herpes_UL69 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF05460 ORC6 > GO:DNA binding ; GO:0003677
Pfam:PF05460 ORC6 > GO:DNA replication ; GO:0006260
Pfam:PF05460 ORC6 > GO:nuclear origin of replication recognition complex ; GO:0005664
Pfam:PF05461 ApoL > GO:lipid binding ; GO:0008289
Pfam:PF05461 ApoL > GO:lipid transport ; GO:0006869
Pfam:PF05461 ApoL > GO:lipoprotein metabolic process ; GO:0042157
Pfam:PF05461 ApoL > GO:extracellular region ; GO:0005576
Pfam:PF05463 Sclerostin > GO:extracellular space ; GO:0005615
Pfam:PF05464 Phi-29_GP4 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF05464 Phi-29_GP4 > GO:sigma factor activity ; GO:0016987
Pfam:PF05464 Phi-29_GP4 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF05465 Halo_GVPC > GO:gas vesicle organization ; GO:0031412
Pfam:PF05465 Halo_GVPC > GO:gas vesicle ; GO:0031411
Pfam:PF05470 eIF-3c_N > GO:translation initiation factor activity ; GO:0003743
Pfam:PF05470 eIF-3c_N > GO:translation initiation factor binding ; GO:0031369
Pfam:PF05470 eIF-3c_N > GO:translational initiation ; GO:0006413
Pfam:PF05470 eIF-3c_N > GO:eukaryotic translation initiation factor 3 complex ; GO:0005852
Pfam:PF05472 Ter > GO:DNA binding ; GO:0003677
Pfam:PF05472 Ter > GO:DNA replication termination ; GO:0006274
Pfam:PF05472 Ter > GO:cytoplasm ; GO:0005737
Pfam:PF05474 Semenogelin > GO:structural molecule activity ; GO:0005198
Pfam:PF05474 Semenogelin > GO:sexual reproduction ; GO:0019953
Pfam:PF05474 Semenogelin > GO:extracellular region ; GO:0005576
Pfam:PF05474 Semenogelin > GO:secretory granule ; GO:0030141
Pfam:PF05476 PET122 > GO:translation initiation factor activity ; GO:0003743
Pfam:PF05476 PET122 > GO:translational initiation ; GO:0006413
Pfam:PF05476 PET122 > GO:mitochondrial envelope ; GO:0005740
Pfam:PF05478 Prominin > GO:integral component of membrane ; GO:0016021
Pfam:PF05479 PsaN > GO:calmodulin binding ; GO:0005516
Pfam:PF05479 PsaN > GO:photosynthesis ; GO:0015979
Pfam:PF05479 PsaN > GO:photosystem I ; GO:0009522
Pfam:PF05479 PsaN > GO:thylakoid membrane ; GO:0042651
Pfam:PF05480 Staph_haemo > GO:pathogenesis ; GO:0009405
Pfam:PF05481 Myco_19_kDa > GO:membrane ; GO:0016020
Pfam:PF05482 Serendipity_A > GO:cellularization ; GO:0007349
Pfam:PF05482 Serendipity_A > GO:cytoplasm ; GO:0005737
Pfam:PF05482 Serendipity_A > GO:membrane ; GO:0016020
Pfam:PF05483 SCP-1 > GO:synaptonemal complex assembly ; GO:0007130
Pfam:PF05483 SCP-1 > GO:synaptonemal complex ; GO:0000795
Pfam:PF05485 THAP > GO:nucleic acid binding ; GO:0003676
Pfam:PF05491 RuvB_C > GO:DNA binding ; GO:0003677
Pfam:PF05491 RuvB_C > GO:four-way junction helicase activity ; GO:0009378
Pfam:PF05491 RuvB_C > GO:DNA repair ; GO:0006281
Pfam:PF05491 RuvB_C > GO:DNA recombination ; GO:0006310
Pfam:PF05493 ATP_synt_H > GO:hydrogen ion transmembrane transporter activity ; GO:0015078
Pfam:PF05493 ATP_synt_H > GO:ATP hydrolysis coupled proton transport ; GO:0015991
Pfam:PF05493 ATP_synt_H > GO:proton-transporting V-type ATPase, V0 domain ; GO:0033179
Pfam:PF05495 zf-CHY > GO:zinc ion binding ; GO:0008270
Pfam:PF05496 RuvB_N > GO:four-way junction helicase activity ; GO:0009378
Pfam:PF05496 RuvB_N > GO:DNA repair ; GO:0006281
Pfam:PF05496 RuvB_N > GO:DNA recombination ; GO:0006310
Pfam:PF05497 Destabilase > GO:lysozyme activity ; GO:0003796
Pfam:PF05499 DMAP1 > GO:negative regulation of transcription, DNA-templated ; GO:0045892
Pfam:PF05499 DMAP1 > GO:nucleus ; GO:0005634
Pfam:PF05502 Dynactin_p62 > GO:dynactin complex ; GO:0005869
Pfam:PF05504 Spore_GerAC > GO:spore germination ; GO:0009847
Pfam:PF05504 Spore_GerAC > GO:membrane ; GO:0016020
Pfam:PF05505 Ebola_NP > GO:viral RNA genome packaging ; GO:0019074
Pfam:PF05505 Ebola_NP > GO:viral nucleocapsid ; GO:0019013
Pfam:PF05506 DUF756 > GO:phospholipase C activity ; GO:0004629
Pfam:PF05506 DUF756 > GO:lipid catabolic process ; GO:0016042
Pfam:PF05507 MAGP > GO:microfibril ; GO:0001527
Pfam:PF05509 TraY > GO:DNA binding ; GO:0003677
Pfam:PF05509 TraY > GO:conjugation ; GO:0000746
Pfam:PF05510 Sarcoglycan_2 > GO:sarcoglycan complex ; GO:0016012
Pfam:PF05511 ATP-synt_F6 > GO:hydrogen ion transmembrane transporter activity ; GO:0015078
Pfam:PF05511 ATP-synt_F6 > GO:ATP synthesis coupled proton transport ; GO:0015986
Pfam:PF05511 ATP-synt_F6 > GO:mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0000276
Pfam:PF05513 TraA > GO:conjugation ; GO:0000746
Pfam:PF05513 TraA > GO:extracellular region ; GO:0005576
Pfam:PF05524 PEP-utilisers_N > GO:phosphoenolpyruvate-dependent sugar phosphotransferase system ; GO:0009401
Pfam:PF05525 Branch_AA_trans > GO:branched-chain amino acid transmembrane transporter activity ; GO:0015658
Pfam:PF05525 Branch_AA_trans > GO:branched-chain amino acid transport ; GO:0015803
Pfam:PF05525 Branch_AA_trans > GO:integral component of membrane ; GO:0016021
Pfam:PF05531 NPV_P10 > GO:viral capsid ; GO:0019028
Pfam:PF05543 Peptidase_C47 > GO:cysteine-type peptidase activity ; GO:0008234
Pfam:PF05543 Peptidase_C47 > GO:proteolysis ; GO:0006508
Pfam:PF05544 Pro_racemase > GO:proline racemase activity ; GO:0018112
Pfam:PF05547 Peptidase_M6 > GO:peptidase activity ; GO:0008233
Pfam:PF05547 Peptidase_M6 > GO:proteolysis ; GO:0006508
Pfam:PF05550 Peptidase_C53 > GO:viral process ; GO:0016032
Pfam:PF05550 Peptidase_C53 > GO:viral protein processing ; GO:0019082
Pfam:PF05557 MAD > GO:mitotic spindle assembly checkpoint ; GO:0007094
Pfam:PF05558 DREPP > GO:cellular response to stimulus ; GO:0051716
Pfam:PF05558 DREPP > GO:anchored component of plasma membrane ; GO:0046658
Pfam:PF05563 SpvD > GO:pathogenesis ; GO:0009405
Pfam:PF05577 Peptidase_S28 > GO:serine-type peptidase activity ; GO:0008236
Pfam:PF05577 Peptidase_S28 > GO:proteolysis ; GO:0006508
Pfam:PF05578 Peptidase_S31 > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF05578 Peptidase_S31 > GO:proteolysis ; GO:0006508
Pfam:PF05579 Peptidase_S32 > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF05579 Peptidase_S32 > GO:viral process ; GO:0016032
Pfam:PF05579 Peptidase_S32 > GO:viral protein processing ; GO:0019082
Pfam:PF05586 Ant_C > GO:receptor activity ; GO:0004872
Pfam:PF05586 Ant_C > GO:integral component of membrane ; GO:0016021
Pfam:PF05587 Anth_Ig > GO:receptor activity ; GO:0004872
Pfam:PF05587 Anth_Ig > GO:integral component of membrane ; GO:0016021
Pfam:PF05615 THOC7 > GO:mRNA processing ; GO:0006397
Pfam:PF05615 THOC7 > GO:THO complex part of transcription export complex ; GO:0000445
Pfam:PF05625 PAXNEB > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF05625 PAXNEB > GO:Elongator holoenzyme complex ; GO:0033588
Pfam:PF05634 APO_RNA-bind > GO:RNA binding ; GO:0003723
Pfam:PF05637 Glyco_transf_34 > GO:transferase activity, transferring hexosyl groups ; GO:0016758
Pfam:PF05637 Glyco_transf_34 > GO:integral component of membrane ; GO:0016021
Pfam:PF05645 RNA_pol_Rpc82 > GO:DNA binding ; GO:0003677
Pfam:PF05645 RNA_pol_Rpc82 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF05645 RNA_pol_Rpc82 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF05648 PEX11 > GO:peroxisome fission ; GO:0016559
Pfam:PF05648 PEX11 > GO:integral component of peroxisomal membrane ; GO:0005779
Pfam:PF05649 Peptidase_M13_N > GO:proteolysis ; GO:0006508
Pfam:PF05652 DcpS > GO:hydrolase activity ; GO:0016787
Pfam:PF05652 DcpS > GO:deadenylation-dependent decapping of nuclear-transcribed mRNA ; GO:0000290
Pfam:PF05653 Mg_trans_NIPA > GO:magnesium ion transmembrane transporter activity ; GO:0015095
Pfam:PF05653 Mg_trans_NIPA > GO:magnesium ion transport ; GO:0015693
Pfam:PF05653 Mg_trans_NIPA > GO:membrane ; GO:0016020
Pfam:PF05656 DUF805 > GO:integral component of membrane ; GO:0016021
Pfam:PF05658 YadA_head > GO:pathogenesis ; GO:0009405
Pfam:PF05658 YadA_head > GO:outer membrane ; GO:0019867
Pfam:PF05662 YadA_stalk > GO:pathogenesis ; GO:0009405
Pfam:PF05662 YadA_stalk > GO:outer membrane ; GO:0019867
Pfam:PF05669 Med31 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF05669 Med31 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF05669 Med31 > GO:mediator complex ; GO:0016592
Pfam:PF05672 MAP7 > GO:microtubule cytoskeleton organization ; GO:0000226
Pfam:PF05672 MAP7 > GO:microtubule ; GO:0005874
Pfam:PF05676 NDUF_B7 > GO:NADH dehydrogenase activity ; GO:0003954
Pfam:PF05676 NDUF_B7 > GO:NADH dehydrogenase (ubiquinone) activity ; GO:0008137
Pfam:PF05676 NDUF_B7 > GO:mitochondrion ; GO:0005739
Pfam:PF05679 CHGN > GO:acetylgalactosaminyltransferase activity ; GO:0008376
Pfam:PF05679 CHGN > GO:Golgi cisterna membrane ; GO:0032580
Pfam:PF05680 ATP-synt_E > GO:hydrogen ion transmembrane transporter activity ; GO:0015078
Pfam:PF05680 ATP-synt_E > GO:ATP synthesis coupled proton transport ; GO:0015986
Pfam:PF05680 ATP-synt_E > GO:mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0000276
Pfam:PF05681 Fumerase > GO:lyase activity ; GO:0016829
Pfam:PF05683 Fumerase_C > GO:hydro-lyase activity ; GO:0016836
Pfam:PF05690 ThiG > GO:2-iminoacetate synthase activity ; GO:0036355
Pfam:PF05690 ThiG > GO:thiamine biosynthetic process ; GO:0009228
Pfam:PF05693 Glycogen_syn > GO:glycogen (starch) synthase activity ; GO:0004373
Pfam:PF05693 Glycogen_syn > GO:glycogen biosynthetic process ; GO:0005978
Pfam:PF05694 SBP56 > GO:selenium binding ; GO:0008430
Pfam:PF05695 DUF825 > GO:ATP binding ; GO:0005524
Pfam:PF05695 DUF825 > GO:chloroplast ; GO:0009507
Pfam:PF05697 Trigger_N > GO:protein folding ; GO:0006457
Pfam:PF05697 Trigger_N > GO:protein transport ; GO:0015031
Pfam:PF05698 Trigger_C > GO:protein folding ; GO:0006457
Pfam:PF05698 Trigger_C > GO:protein transport ; GO:0015031
Pfam:PF05699 Dimer_Tnp_hAT > GO:protein dimerization activity ; GO:0046983
Pfam:PF05700 BCAS2 > GO:mRNA processing ; GO:0006397
Pfam:PF05706 CDKN3 > GO:phosphoprotein phosphatase activity ; GO:0004721
Pfam:PF05706 CDKN3 > GO:protein tyrosine phosphatase activity ; GO:0004725
Pfam:PF05710 Coiled > GO:protein binding ; GO:0005515
Pfam:PF05715 zf-piccolo > GO:metal ion binding ; GO:0046872
Pfam:PF05715 zf-piccolo > GO:synapse ; GO:0045202
Pfam:PF05720 Dicty_CAD > GO:cell adhesion ; GO:0007155
Pfam:PF05722 Ustilago_mating > GO:DNA binding ; GO:0003677
Pfam:PF05722 Ustilago_mating > GO:nucleus ; GO:0005634
Pfam:PF05724 TPMT > GO:S-adenosylmethionine-dependent methyltransferase activity ; GO:0008757
Pfam:PF05731 TROVE > GO:RNA binding ; GO:0003723
Pfam:PF05732 RepL > GO:DNA replication ; GO:0006260
Pfam:PF05732 RepL > GO:plasmid maintenance ; GO:0006276
Pfam:PF05733 Tenui_N > GO:RNA binding ; GO:0003723
Pfam:PF05733 Tenui_N > GO:viral nucleocapsid ; GO:0019013
Pfam:PF05735 TSP_C > GO:calcium ion binding ; GO:0005509
Pfam:PF05735 TSP_C > GO:cell adhesion ; GO:0007155
Pfam:PF05735 TSP_C > GO:extracellular region ; GO:0005576
Pfam:PF05736 OprF > GO:porin activity ; GO:0015288
Pfam:PF05736 OprF > GO:transport ; GO:0006810
Pfam:PF05736 OprF > GO:cell outer membrane ; GO:0009279
Pfam:PF05736 OprF > GO:integral component of membrane ; GO:0016021
Pfam:PF05737 Collagen_bind > GO:collagen binding ; GO:0005518
Pfam:PF05739 SNARE > GO:protein binding ; GO:0005515
Pfam:PF05743 UEV > GO:cellular protein modification process ; GO:0006464
Pfam:PF05743 UEV > GO:protein transport ; GO:0015031
Pfam:PF05745 CRPA > GO:outer membrane ; GO:0019867
Pfam:PF05746 DALR_1 > GO:arginine-tRNA ligase activity ; GO:0004814
Pfam:PF05746 DALR_1 > GO:ATP binding ; GO:0005524
Pfam:PF05746 DALR_1 > GO:arginyl-tRNA aminoacylation ; GO:0006420
Pfam:PF05748 Rubella_E1 > GO:integral component of membrane ; GO:0016021
Pfam:PF05748 Rubella_E1 > GO:viral nucleocapsid ; GO:0019013
Pfam:PF05749 Rubella_E2 > GO:integral component of membrane ; GO:0016021
Pfam:PF05749 Rubella_E2 > GO:viral nucleocapsid ; GO:0019013
Pfam:PF05750 Rubella_Capsid > GO:integral component of membrane ; GO:0016021
Pfam:PF05750 Rubella_Capsid > GO:viral nucleocapsid ; GO:0019013
Pfam:PF05753 TRAP_beta > GO:endoplasmic reticulum ; GO:0005783
Pfam:PF05753 TRAP_beta > GO:integral component of membrane ; GO:0016021
Pfam:PF05757 PsbQ > GO:calcium ion binding ; GO:0005509
Pfam:PF05757 PsbQ > GO:photosynthesis ; GO:0015979
Pfam:PF05757 PsbQ > GO:photosystem II ; GO:0009523
Pfam:PF05757 PsbQ > GO:photosystem II oxygen evolving complex ; GO:0009654
Pfam:PF05757 PsbQ > GO:extrinsic component of membrane ; GO:0019898
Pfam:PF05764 YL1 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF05764 YL1 > GO:nucleus ; GO:0005634
Pfam:PF05767 Pox_A14 > GO:viral envelope ; GO:0019031
Pfam:PF05770 Ins134_P3_kin > GO:magnesium ion binding ; GO:0000287
Pfam:PF05770 Ins134_P3_kin > GO:ATP binding ; GO:0005524
Pfam:PF05770 Ins134_P3_kin > GO:inositol tetrakisphosphate 1-kinase activity ; GO:0047325
Pfam:PF05770 Ins134_P3_kin > GO:inositol-1,3,4-trisphosphate 6-kinase activity ; GO:0052725
Pfam:PF05770 Ins134_P3_kin > GO:inositol-1,3,4-trisphosphate 5-kinase activity ; GO:0052726
Pfam:PF05770 Ins134_P3_kin > GO:inositol trisphosphate metabolic process ; GO:0032957
Pfam:PF05770 Ins134_P3_kin > GO:intracellular ; GO:0005622
Pfam:PF05773 RWD > GO:protein binding ; GO:0005515
Pfam:PF05777 Acp26Ab > GO:mating behavior ; GO:0007617
Pfam:PF05777 Acp26Ab > GO:extracellular region ; GO:0005576
Pfam:PF05778 Apo-CIII > GO:lipid binding ; GO:0008289
Pfam:PF05778 Apo-CIII > GO:lipid transport ; GO:0006869
Pfam:PF05778 Apo-CIII > GO:lipoprotein metabolic process ; GO:0042157
Pfam:PF05778 Apo-CIII > GO:extracellular region ; GO:0005576
Pfam:PF05782 ECM1 > GO:extracellular region ; GO:0005576
Pfam:PF05784 Herpes_UL82_83 > GO:pathogenesis ; GO:0009405
Pfam:PF05786 Cnd2 > GO:mitotic chromosome condensation ; GO:0007076
Pfam:PF05786 Cnd2 > GO:condensin complex ; GO:0000796
Pfam:PF05788 Orbi_VP1 > GO:RNA binding ; GO:0003723
Pfam:PF05788 Orbi_VP1 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF05788 Orbi_VP1 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF05790 C2-set > GO:cell adhesion ; GO:0007155
Pfam:PF05790 C2-set > GO:integral component of membrane ; GO:0016021
Pfam:PF05791 Bacillus_HBL > GO:pathogenesis ; GO:0009405
Pfam:PF05791 Bacillus_HBL > GO:membrane ; GO:0016020
Pfam:PF05792 Candida_ALS > GO:cell adhesion ; GO:0007155
Pfam:PF05793 TFIIF_alpha > GO:DNA binding ; GO:0003677
Pfam:PF05793 TFIIF_alpha > GO:transcription initiation from RNA polymerase II promoter ; GO:0006367
Pfam:PF05793 TFIIF_alpha > GO:positive regulation of transcription elongation from RNA polymerase II promoter ; GO:0032968
Pfam:PF05793 TFIIF_alpha > GO:nucleus ; GO:0005634
Pfam:PF05797 Rep_4 > GO:plasmid partitioning ; GO:0030541
Pfam:PF05800 GvpO > GO:gas vesicle organization ; GO:0031412
Pfam:PF05805 L6_membrane > GO:integral component of membrane ; GO:0016021
Pfam:PF05806 Noggin > GO:negative regulation of cell differentiation ; GO:0045596
Pfam:PF05808 Podoplanin > GO:integral component of membrane ; GO:0016021
Pfam:PF05817 Ribophorin_II > GO:protein N-linked glycosylation ; GO:0006487
Pfam:PF05817 Ribophorin_II > GO:oligosaccharyltransferase complex ; GO:0008250
Pfam:PF05817 Ribophorin_II > GO:integral component of membrane ; GO:0016021
Pfam:PF05818 TraT > GO:regulation of conjugation ; GO:0046999
Pfam:PF05818 TraT > GO:outer membrane ; GO:0019867
Pfam:PF05819 NolX > GO:nodulation ; GO:0009877
Pfam:PF05821 NDUF_B8 > GO:NADH dehydrogenase activity ; GO:0003954
Pfam:PF05821 NDUF_B8 > GO:NADH dehydrogenase (ubiquinone) activity ; GO:0008137
Pfam:PF05821 NDUF_B8 > GO:mitochondrion ; GO:0005739
Pfam:PF05822 UMPH-1 > GO:magnesium ion binding ; GO:0000287
Pfam:PF05822 UMPH-1 > GO:5'-nucleotidase activity ; GO:0008253
Pfam:PF05822 UMPH-1 > GO:cytoplasm ; GO:0005737
Pfam:PF05823 Gp-FAR-1 > GO:lipid binding ; GO:0008289
Pfam:PF05824 Pro-MCH > GO:melanin-concentrating hormone activity ; GO:0030354
Pfam:PF05824 Pro-MCH > GO:synaptic transmission ; GO:0007268
Pfam:PF05826 Phospholip_A2_2 > GO:phospholipase A2 activity ; GO:0004623
Pfam:PF05826 Phospholip_A2_2 > GO:calcium ion binding ; GO:0005509
Pfam:PF05826 Phospholip_A2_2 > GO:lipid catabolic process ; GO:0016042
Pfam:PF05829 Adeno_PX > GO:DNA binding ; GO:0003677
Pfam:PF05829 Adeno_PX > GO:viral nucleocapsid ; GO:0019013
Pfam:PF05830 NodZ > GO:transferase activity, transferring hexosyl groups ; GO:0016758
Pfam:PF05830 NodZ > GO:oligosaccharide biosynthetic process ; GO:0009312
Pfam:PF05830 NodZ > GO:nodulation ; GO:0009877
Pfam:PF05832 DUF846 > GO:integral component of membrane ; GO:0016021
Pfam:PF05834 Lycopene_cycl > GO:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen ; GO:0016705
Pfam:PF05834 Lycopene_cycl > GO:carotenoid biosynthetic process ; GO:0016117
Pfam:PF05835 Synaphin > GO:syntaxin binding ; GO:0019905
Pfam:PF05835 Synaphin > GO:neurotransmitter transport ; GO:0006836
Pfam:PF05836 Chorion_S16 > GO:multicellular organismal development ; GO:0007275
Pfam:PF05836 Chorion_S16 > GO:chorion ; GO:0042600
Pfam:PF05837 CENP-H > GO:kinetochore assembly ; GO:0051382
Pfam:PF05837 CENP-H > GO:kinetochore ; GO:0000776
Pfam:PF05840 Phage_GPA > GO:DNA replication ; GO:0006260
Pfam:PF05841 Apc15p > GO:regulation of mitotic metaphase/anaphase transition ; GO:0030071
Pfam:PF05841 Apc15p > GO:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process ; GO:0031145
Pfam:PF05841 Apc15p > GO:anaphase-promoting complex ; GO:0005680
Pfam:PF05842 Euplotes_phero > GO:pheromone activity ; GO:0005186
Pfam:PF05842 Euplotes_phero > GO:cell communication ; GO:0007154
Pfam:PF05842 Euplotes_phero > GO:extracellular region ; GO:0005576
Pfam:PF05843 Suf > GO:mRNA processing ; GO:0006397
Pfam:PF05843 Suf > GO:nucleus ; GO:0005634
Pfam:PF05845 PhnH > GO:organic phosphonate metabolic process ; GO:0019634
Pfam:PF05847 Baculo_LEF-3 > GO:DNA binding ; GO:0003677
Pfam:PF05847 Baculo_LEF-3 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF05848 CtsR > GO:DNA binding ; GO:0003677
Pfam:PF05848 CtsR > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF05848 CtsR > GO:response to stress ; GO:0006950
Pfam:PF05849 L-fibroin > GO:extracellular region ; GO:0005576
Pfam:PF05851 Lentivirus_VIF > GO:viral life cycle ; GO:0019058
Pfam:PF05853 DUF849 > GO:transferase activity ; GO:0016740
Pfam:PF05853 DUF849 > GO:L-lysine catabolic process to acetate ; GO:0019475
Pfam:PF05854 MC1 > GO:DNA protection ; GO:0042262
Pfam:PF05856 ARPC4 > GO:actin filament polymerization ; GO:0030041
Pfam:PF05856 ARPC4 > GO:Arp2/3 complex-mediated actin nucleation ; GO:0034314
Pfam:PF05856 ARPC4 > GO:cytoskeleton ; GO:0005856
Pfam:PF05856 ARPC4 > GO:Arp2/3 protein complex ; GO:0005885
Pfam:PF05858 BIV_Env > GO:integral component of membrane ; GO:0016021
Pfam:PF05858 BIV_Env > GO:vesicle coat ; GO:0030120
Pfam:PF05859 Mis12 > GO:cell cycle ; GO:0007049
Pfam:PF05859 Mis12 > GO:mitotic nuclear division ; GO:0007067
Pfam:PF05859 Mis12 > GO:chromosome, centromeric region ; GO:0000775
Pfam:PF05859 Mis12 > GO:nucleus ; GO:0005634
Pfam:PF05861 PhnI > GO:organic phosphonate metabolic process ; GO:0019634
Pfam:PF05864 Chordopox_RPO7 > GO:DNA binding ; GO:0003677
Pfam:PF05864 Chordopox_RPO7 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF05864 Chordopox_RPO7 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF05866 RusA > GO:magnesium ion binding ; GO:0000287
Pfam:PF05866 RusA > GO:DNA repair ; GO:0006281
Pfam:PF05866 RusA > GO:DNA recombination ; GO:0006310
Pfam:PF05868 Rotavirus_VP7 > GO:integral component of membrane ; GO:0016021
Pfam:PF05868 Rotavirus_VP7 > GO:virion ; GO:0019012
Pfam:PF05869 Dam > GO:DNA binding ; GO:0003677
Pfam:PF05869 Dam > GO:site-specific DNA-methyltransferase (adenine-specific) activity ; GO:0009007
Pfam:PF05869 Dam > GO:DNA methylation on adenine ; GO:0032775
Pfam:PF05870 PA_decarbox > GO:carboxy-lyase activity ; GO:0016831
Pfam:PF05873 Mt_ATP-synt_D > GO:hydrogen ion transmembrane transporter activity ; GO:0015078
Pfam:PF05873 Mt_ATP-synt_D > GO:ATP synthesis coupled proton transport ; GO:0015986
Pfam:PF05873 Mt_ATP-synt_D > GO:mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0000276
Pfam:PF05874 PBAN > GO:neuropeptide hormone activity ; GO:0005184
Pfam:PF05874 PBAN > GO:neuropeptide signaling pathway ; GO:0007218
Pfam:PF05874 PBAN > GO:pheromone biosynthetic process ; GO:0042811
Pfam:PF05875 Ceramidase > GO:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides ; GO:0016811
Pfam:PF05875 Ceramidase > GO:ceramide metabolic process ; GO:0006672
Pfam:PF05875 Ceramidase > GO:integral component of membrane ; GO:0016021
Pfam:PF05881 CNPase > GO:2',3'-cyclic-nucleotide 3'-phosphodiesterase activity ; GO:0004113
Pfam:PF05881 CNPase > GO:cyclic nucleotide catabolic process ; GO:0009214
Pfam:PF05881 CNPase > GO:membrane ; GO:0016020
Pfam:PF05887 Trypan_PARP > GO:membrane ; GO:0016020
Pfam:PF05889 SLA_LP_auto_ag > GO:transferase activity ; GO:0016740
Pfam:PF05891 Methyltransf_PK > GO:methyltransferase activity ; GO:0008168
Pfam:PF05892 Tricho_coat > GO:viral capsid ; GO:0019028
Pfam:PF05893 LuxC > GO:acyl-CoA dehydrogenase activity ; GO:0003995
Pfam:PF05893 LuxC > GO:bioluminescence ; GO:0008218
Pfam:PF05893 LuxC > GO:oxidation-reduction process ; GO:0055114
Pfam:PF05896 NQRA > GO:oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; GO:0016655
Pfam:PF05896 NQRA > GO:sodium ion transport ; GO:0006814
Pfam:PF05896 NQRA > GO:oxidation-reduction process ; GO:0055114
Pfam:PF05902 4_1_CTD > GO:actin binding ; GO:0003779
Pfam:PF05902 4_1_CTD > GO:structural molecule activity ; GO:0005198
Pfam:PF05902 4_1_CTD > GO:cytoskeleton ; GO:0005856
Pfam:PF05920 Homeobox_KN > GO:DNA binding ; GO:0003677
Pfam:PF05920 Homeobox_KN > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF05923 APC_crr > GO:Wnt signaling pathway ; GO:0016055
Pfam:PF05924 SAMP > GO:beta-catenin binding ; GO:0008013
Pfam:PF05924 SAMP > GO:Wnt signaling pathway ; GO:0016055
Pfam:PF05925 IpgD > GO:phosphatase activity ; GO:0016791
Pfam:PF05925 IpgD > GO:pathogenesis ; GO:0009405
Pfam:PF05926 Phage_GPL > GO:viral capsid assembly ; GO:0019069
Pfam:PF05927 Penaeidin > GO:chitin binding ; GO:0008061
Pfam:PF05927 Penaeidin > GO:cytoplasm ; GO:0005737
Pfam:PF05929 Phage_GPO > GO:viral capsid assembly ; GO:0019069
Pfam:PF05932 CesT > GO:pathogenesis ; GO:0009405
Pfam:PF05932 CesT > GO:regulation of protein secretion ; GO:0050708
Pfam:PF05932 CesT > GO:cytoplasm ; GO:0005737
Pfam:PF05933 Fun_ATP-synt_8 > GO:hydrogen ion transmembrane transporter activity ; GO:0015078
Pfam:PF05933 Fun_ATP-synt_8 > GO:ATP synthesis coupled proton transport ; GO:0015986
Pfam:PF05933 Fun_ATP-synt_8 > GO:mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) ; GO:0000276
Pfam:PF05937 EB1_binding > GO:beta-catenin binding ; GO:0008013
Pfam:PF05937 EB1_binding > GO:Wnt signaling pathway ; GO:0016055
Pfam:PF05944 Phage_term_smal > GO:DNA binding ; GO:0003677
Pfam:PF05944 Phage_term_smal > GO:endonuclease activity ; GO:0004519
Pfam:PF05944 Phage_term_smal > GO:viral capsid assembly ; GO:0019069
Pfam:PF05946 TcpA > GO:pathogenesis ; GO:0009405
Pfam:PF05946 TcpA > GO:pilus ; GO:0009289
Pfam:PF05946 TcpA > GO:extracellular organelle ; GO:0043230
Pfam:PF05953 Allatostatin > GO:neuropeptide hormone activity ; GO:0005184
Pfam:PF05955 Herpes_gp2 > GO:viral process ; GO:0016032
Pfam:PF05955 Herpes_gp2 > GO:integral component of membrane ; GO:0016021
Pfam:PF05956 APC_basic > GO:microtubule binding ; GO:0008017
Pfam:PF05956 APC_basic > GO:Wnt signaling pathway ; GO:0016055
Pfam:PF05958 tRNA_U5-meth_tr > GO:RNA methyltransferase activity ; GO:0008173
Pfam:PF05958 tRNA_U5-meth_tr > GO:RNA processing ; GO:0006396
Pfam:PF05964 FYRN > GO:nucleus ; GO:0005634
Pfam:PF05965 FYRC > GO:nucleus ; GO:0005634
Pfam:PF05969 PSII_Ycf12 > GO:photosynthesis ; GO:0015979
Pfam:PF05969 PSII_Ycf12 > GO:photosystem II ; GO:0009523
Pfam:PF05969 PSII_Ycf12 > GO:integral component of membrane ; GO:0016021
Pfam:PF05970 PIF1 > GO:DNA helicase activity ; GO:0003678
Pfam:PF05970 PIF1 > GO:telomere maintenance ; GO:0000723
Pfam:PF05970 PIF1 > GO:DNA repair ; GO:0006281
Pfam:PF05971 Methyltransf_10 > GO:methyltransferase activity ; GO:0008168
Pfam:PF05972 APC_15aa > GO:beta-catenin binding ; GO:0008013
Pfam:PF05972 APC_15aa > GO:Wnt signaling pathway ; GO:0016055
Pfam:PF05975 EcsB > GO:integral component of membrane ; GO:0016021
Pfam:PF05983 Med7 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF05983 Med7 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF05983 Med7 > GO:mediator complex ; GO:0016592
Pfam:PF05985 EutC > GO:ethanolamine ammonia-lyase activity ; GO:0008851
Pfam:PF05985 EutC > GO:cellular amino acid metabolic process ; GO:0006520
Pfam:PF05986 ADAM_spacer1 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF05986 ADAM_spacer1 > GO:extracellular matrix ; GO:0031012
Pfam:PF05992 SbmA_BacA > GO:transporter activity ; GO:0005215
Pfam:PF05992 SbmA_BacA > GO:transport ; GO:0006810
Pfam:PF05992 SbmA_BacA > GO:Gram-negative-bacterium-type cell wall ; GO:0009276
Pfam:PF05992 SbmA_BacA > GO:integral component of membrane ; GO:0016021
Pfam:PF05993 Reovirus_M2 > GO:host cell surface binding ; GO:0046812
Pfam:PF05993 Reovirus_M2 > GO:pathogenesis ; GO:0009405
Pfam:PF05993 Reovirus_M2 > GO:viral entry into host cell ; GO:0046718
Pfam:PF05993 Reovirus_M2 > GO:viral outer capsid ; GO:0039624
Pfam:PF05995 CDO_I > GO:iron ion binding ; GO:0005506
Pfam:PF05995 CDO_I > GO:cysteine dioxygenase activity ; GO:0017172
Pfam:PF05995 CDO_I > GO:L-cysteine metabolic process ; GO:0046439
Pfam:PF05995 CDO_I > GO:oxidation-reduction process ; GO:0055114
Pfam:PF05996 Fe_bilin_red > GO:oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor ; GO:0016636
Pfam:PF05996 Fe_bilin_red > GO:cobalt ion binding ; GO:0050897
Pfam:PF05996 Fe_bilin_red > GO:phytochromobilin biosynthetic process ; GO:0010024
Pfam:PF05996 Fe_bilin_red > GO:oxidation-reduction process ; GO:0055114
Pfam:PF05997 Nop52 > GO:rRNA processing ; GO:0006364
Pfam:PF05997 Nop52 > GO:preribosome, small subunit precursor ; GO:0030688
Pfam:PF06003 SMN > GO:RNA binding ; GO:0003723
Pfam:PF06003 SMN > GO:mRNA processing ; GO:0006397
Pfam:PF06003 SMN > GO:nucleus ; GO:0005634
Pfam:PF06003 SMN > GO:cytoplasm ; GO:0005737
Pfam:PF06005 DUF904 > GO:barrier septum assembly ; GO:0000917
Pfam:PF06005 DUF904 > GO:cytokinesis by binary fission ; GO:0043093
Pfam:PF06005 DUF904 > GO:cytoplasm ; GO:0005737
Pfam:PF06007 PhnJ > GO:lyase activity ; GO:0016829
Pfam:PF06007 PhnJ > GO:organic phosphonate catabolic process ; GO:0019700
Pfam:PF06007 PhnJ > GO:alkylphosphonate transport ; GO:0042916
Pfam:PF06008 Laminin_I > GO:receptor binding ; GO:0005102
Pfam:PF06008 Laminin_I > GO:regulation of cell adhesion ; GO:0030155
Pfam:PF06008 Laminin_I > GO:regulation of cell migration ; GO:0030334
Pfam:PF06008 Laminin_I > GO:regulation of embryonic development ; GO:0045995
Pfam:PF06008 Laminin_I > GO:laminin-1 complex ; GO:0005606
Pfam:PF06009 Laminin_II > GO:cell adhesion ; GO:0007155
Pfam:PF06016 Reovirus_L2 > GO:mRNA (guanine-N7-)-methyltransferase activity ; GO:0004482
Pfam:PF06016 Reovirus_L2 > GO:mRNA guanylyltransferase activity ; GO:0004484
Pfam:PF06016 Reovirus_L2 > GO:ATP binding ; GO:0005524
Pfam:PF06016 Reovirus_L2 > GO:7-methylguanosine mRNA capping ; GO:0006370
Pfam:PF06016 Reovirus_L2 > GO:viral capsid ; GO:0019028
Pfam:PF06017 Myosin_TH1 > GO:motor activity ; GO:0003774
Pfam:PF06017 Myosin_TH1 > GO:myosin complex ; GO:0016459
Pfam:PF06018 CodY > GO:DNA binding ; GO:0003677
Pfam:PF06018 CodY > GO:GTP binding ; GO:0005525
Pfam:PF06021 Gly_acyl_tr_N > GO:glycine N-acyltransferase activity ; GO:0047961
Pfam:PF06021 Gly_acyl_tr_N > GO:mitochondrion ; GO:0005739
Pfam:PF06026 Rib_5-P_isom_A > GO:ribose-5-phosphate isomerase activity ; GO:0004751
Pfam:PF06026 Rib_5-P_isom_A > GO:pentose-phosphate shunt, non-oxidative branch ; GO:0009052
Pfam:PF06027 DUF914 > GO:transport ; GO:0006810
Pfam:PF06027 DUF914 > GO:integral component of membrane ; GO:0016021
Pfam:PF06039 Mqo > GO:malate dehydrogenase (quinone) activity ; GO:0008924
Pfam:PF06039 Mqo > GO:tricarboxylic acid cycle ; GO:0006099
Pfam:PF06046 Sec6 > GO:exocytosis ; GO:0006887
Pfam:PF06046 Sec6 > GO:exocyst ; GO:0000145
Pfam:PF06049 LSPR > GO:blood coagulation ; GO:0007596
Pfam:PF06052 3-HAO > GO:3-hydroxyanthranilate 3,4-dioxygenase activity ; GO:0000334
Pfam:PF06052 3-HAO > GO:iron ion binding ; GO:0005506
Pfam:PF06052 3-HAO > GO:oxidation-reduction process ; GO:0055114
Pfam:PF06056 Terminase_5 > GO:ATP binding ; GO:0005524
Pfam:PF06056 Terminase_5 > GO:viral capsid assembly ; GO:0019069
Pfam:PF06061 Baculo_ME53 > GO:DNA binding ; GO:0003677
Pfam:PF06061 Baculo_ME53 > GO:zinc ion binding ; GO:0008270
Pfam:PF06068 TIP49 > GO:DNA helicase activity ; GO:0003678
Pfam:PF06068 TIP49 > GO:ATP binding ; GO:0005524
Pfam:PF06070 Herpes_UL32 > GO:structural molecule activity ; GO:0005198
Pfam:PF06072 Herpes_US9 > GO:viral tegument ; GO:0019033
Pfam:PF06079 Apyrase > GO:calcium ion binding ; GO:0005509
Pfam:PF06079 Apyrase > GO:pyrophosphatase activity ; GO:0016462
Pfam:PF06083 IL17 > GO:cytokine activity ; GO:0005125
Pfam:PF06083 IL17 > GO:inflammatory response ; GO:0006954
Pfam:PF06083 IL17 > GO:extracellular region ; GO:0005576
Pfam:PF06085 Rz1 > GO:fusion of virus membrane with host plasma membrane ; GO:0019064
Pfam:PF06085 Rz1 > GO:outer membrane ; GO:0019867
Pfam:PF06087 Tyr-DNA_phospho > GO:phosphoric diester hydrolase activity ; GO:0008081
Pfam:PF06087 Tyr-DNA_phospho > GO:DNA repair ; GO:0006281
Pfam:PF06087 Tyr-DNA_phospho > GO:nucleus ; GO:0005634
Pfam:PF06090 Ins_P5_2-kin > GO:ATP binding ; GO:0005524
Pfam:PF06090 Ins_P5_2-kin > GO:inositol pentakisphosphate 2-kinase activity ; GO:0035299
Pfam:PF06100 Strep_67kDa_ant > GO:oleate hydratase activity ; GO:0050151
Pfam:PF06100 Strep_67kDa_ant > GO:FAD binding ; GO:0071949
Pfam:PF06100 Strep_67kDa_ant > GO:fatty acid metabolic process ; GO:0006631
Pfam:PF06105 Aph-1 > GO:protein processing ; GO:0016485
Pfam:PF06105 Aph-1 > GO:positive regulation of catalytic activity ; GO:0043085
Pfam:PF06105 Aph-1 > GO:integral component of membrane ; GO:0016021
Pfam:PF06109 HlyE > GO:pathogenesis ; GO:0009405
Pfam:PF06109 HlyE > GO:hemolysis in other organism ; GO:0044179
Pfam:PF06112 Herpes_capsid > GO:viral capsid ; GO:0019028
Pfam:PF06119 NIDO > GO:cell-matrix adhesion ; GO:0007160
Pfam:PF06121 DUF959 > GO:extracellular matrix ; GO:0031012
Pfam:PF06130 PduL > GO:transferase activity, transferring acyl groups other than amino-acyl groups ; GO:0016747
Pfam:PF06134 RhaA > GO:L-rhamnose isomerase activity ; GO:0008740
Pfam:PF06134 RhaA > GO:manganese ion binding ; GO:0030145
Pfam:PF06134 RhaA > GO:rhamnose metabolic process ; GO:0019299
Pfam:PF06140 Ifi-6-16 > GO:integral component of membrane ; GO:0016021
Pfam:PF06144 DNA_pol3_delta > GO:DNA binding ; GO:0003677
Pfam:PF06144 DNA_pol3_delta > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF06144 DNA_pol3_delta > GO:DNA replication ; GO:0006260
Pfam:PF06144 DNA_pol3_delta > GO:DNA polymerase III complex ; GO:0009360
Pfam:PF06151 Trehalose_recp > GO:taste receptor activity ; GO:0008527
Pfam:PF06151 Trehalose_recp > GO:detection of chemical stimulus involved in sensory perception of taste ; GO:0050912
Pfam:PF06151 Trehalose_recp > GO:integral component of membrane ; GO:0016021
Pfam:PF06152 Phage_min_cap2 > GO:structural molecule activity ; GO:0005198
Pfam:PF06152 Phage_min_cap2 > GO:viral capsid ; GO:0019028
Pfam:PF06156 DUF972 > GO:DNA replication ; GO:0006260
Pfam:PF06160 EzrA > GO:septin ring assembly ; GO:0000921
Pfam:PF06160 EzrA > GO:septin ring ; GO:0005940
Pfam:PF06160 EzrA > GO:integral component of membrane ; GO:0016021
Pfam:PF06176 WaaY > GO:lipopolysaccharide core region biosynthetic process ; GO:0009244
Pfam:PF06177 QueT > GO:plasma membrane ; GO:0005886
Pfam:PF06179 Med22 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF06179 Med22 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF06179 Med22 > GO:mediator complex ; GO:0016592
Pfam:PF06180 CbiK > GO:sirohydrochlorin cobaltochelatase activity ; GO:0016852
Pfam:PF06180 CbiK > GO:anaerobic cobalamin biosynthetic process ; GO:0019251
Pfam:PF06184 Potex_coat > GO:structural molecule activity ; GO:0005198
Pfam:PF06184 Potex_coat > GO:viral capsid ; GO:0019028
Pfam:PF06189 5-nucleotidase > GO:nucleotide binding ; GO:0000166
Pfam:PF06189 5-nucleotidase > GO:magnesium ion binding ; GO:0000287
Pfam:PF06189 5-nucleotidase > GO:5'-nucleotidase activity ; GO:0008253
Pfam:PF06189 5-nucleotidase > GO:nucleotide metabolic process ; GO:0009117
Pfam:PF06189 5-nucleotidase > GO:cytoplasm ; GO:0005737
Pfam:PF06202 GDE_C > GO:4-alpha-glucanotransferase activity ; GO:0004134
Pfam:PF06202 GDE_C > GO:amylo-alpha-1,6-glucosidase activity ; GO:0004135
Pfam:PF06202 GDE_C > GO:glycogen catabolic process ; GO:0005980
Pfam:PF06203 CCT > GO:protein binding ; GO:0005515
Pfam:PF06206 CpeT > GO:protein-phycocyanobilin linkage ; GO:0017009
Pfam:PF06209 COBRA1 > GO:negative regulation of transcription, DNA-templated ; GO:0045892
Pfam:PF06209 COBRA1 > GO:nucleus ; GO:0005634
Pfam:PF06213 CobT > GO:cobalamin biosynthetic process ; GO:0009236
Pfam:PF06214 SLAM > GO:receptor activity ; GO:0004872
Pfam:PF06214 SLAM > GO:lymphocyte activation ; GO:0046649
Pfam:PF06214 SLAM > GO:cell surface ; GO:0009986
Pfam:PF06214 SLAM > GO:integral component of membrane ; GO:0016021
Pfam:PF06220 zf-U1 > GO:zinc ion binding ; GO:0008270
Pfam:PF06221 zf-C2HC5 > GO:zinc ion binding ; GO:0008270
Pfam:PF06221 zf-C2HC5 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF06221 zf-C2HC5 > GO:nucleus ; GO:0005634
Pfam:PF06236 MelC1 > GO:copper ion binding ; GO:0005507
Pfam:PF06236 MelC1 > GO:melanin biosynthetic process ; GO:0042438
Pfam:PF06247 Plasmod_Pvs28 > GO:cell surface ; GO:0009986
Pfam:PF06247 Plasmod_Pvs28 > GO:membrane ; GO:0016020
Pfam:PF06248 Zw10 > GO:mitotic nuclear division ; GO:0007067
Pfam:PF06248 Zw10 > GO:chromosome, centromeric region ; GO:0000775
Pfam:PF06248 Zw10 > GO:nucleus ; GO:0005634
Pfam:PF06253 MTTB > GO:methyltransferase activity ; GO:0008168
Pfam:PF06253 MTTB > GO:methanogenesis ; GO:0015948
Pfam:PF06257 DUF1021 > GO:biofilm formation ; GO:0042710
Pfam:PF06268 Fascin > GO:protein binding, bridging ; GO:0030674
Pfam:PF06268 Fascin > GO:actin filament binding ; GO:0051015
Pfam:PF06280 DUF1034 > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF06280 DUF1034 > GO:cell wall ; GO:0005618
Pfam:PF06280 DUF1034 > GO:membrane ; GO:0016020
Pfam:PF06281 DUF1035 > GO:structural molecule activity ; GO:0005198
Pfam:PF06281 DUF1035 > GO:integral component of membrane ; GO:0016021
Pfam:PF06286 Coleoptericin > GO:defense response to bacterium ; GO:0042742
Pfam:PF06286 Coleoptericin > GO:extracellular region ; GO:0005576
Pfam:PF06291 Lambda_Bor > GO:cell outer membrane ; GO:0009279
Pfam:PF06293 Kdo > GO:ATP binding ; GO:0005524
Pfam:PF06293 Kdo > GO:phosphotransferase activity, alcohol group as acceptor ; GO:0016773
Pfam:PF06293 Kdo > GO:lipopolysaccharide biosynthetic process ; GO:0009103
Pfam:PF06293 Kdo > GO:membrane ; GO:0016020
Pfam:PF06297 PET > GO:zinc ion binding ; GO:0008270
Pfam:PF06298 PsbY > GO:manganese ion binding ; GO:0030145
Pfam:PF06298 PsbY > GO:photosynthesis ; GO:0015979
Pfam:PF06298 PsbY > GO:photosystem II ; GO:0009523
Pfam:PF06298 PsbY > GO:integral component of membrane ; GO:0016021
Pfam:PF06303 MatP > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF06308 ErmC > GO:response to antibiotic ; GO:0046677
Pfam:PF06309 Torsin > GO:ATP binding ; GO:0005524
Pfam:PF06309 Torsin > GO:chaperone mediated protein folding requiring cofactor ; GO:0051085
Pfam:PF06314 ADC > GO:carboxy-lyase activity ; GO:0016831
Pfam:PF06315 AceK > GO:[isocitrate dehydrogenase (NADP+)] kinase activity ; GO:0008772
Pfam:PF06315 AceK > GO:phosphatase activity ; GO:0016791
Pfam:PF06315 AceK > GO:glucose metabolic process ; GO:0006006
Pfam:PF06315 AceK > GO:cytoplasm ; GO:0005737
Pfam:PF06316 Ail_Lom > GO:cell outer membrane ; GO:0009279
Pfam:PF06317 Arena_RNA_pol > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF06317 Arena_RNA_pol > GO:viral genome replication ; GO:0019079
Pfam:PF06324 Pigment_DH > GO:hormone activity ; GO:0005179
Pfam:PF06324 Pigment_DH > GO:response to light stimulus ; GO:0009416
Pfam:PF06324 Pigment_DH > GO:extracellular region ; GO:0005576
Pfam:PF06325 PrmA > GO:protein methyltransferase activity ; GO:0008276
Pfam:PF06325 PrmA > GO:protein methylation ; GO:0006479
Pfam:PF06325 PrmA > GO:cytoplasm ; GO:0005737
Pfam:PF06326 Vesiculo_matrix > GO:structural molecule activity ; GO:0005198
Pfam:PF06326 Vesiculo_matrix > GO:viral envelope ; GO:0019031
Pfam:PF06327 DUF1053 > GO:adenylate cyclase activity ; GO:0004016
Pfam:PF06327 DUF1053 > GO:cyclic nucleotide biosynthetic process ; GO:0009190
Pfam:PF06327 DUF1053 > GO:integral component of membrane ; GO:0016021
Pfam:PF06330 TRI5 > GO:trichodiene synthase activity ; GO:0045482
Pfam:PF06330 TRI5 > GO:sesquiterpenoid biosynthetic process ; GO:0016106
Pfam:PF06331 Tbf5 > GO:nucleotide-excision repair ; GO:0006289
Pfam:PF06331 Tbf5 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF06331 Tbf5 > GO:core TFIIH complex ; GO:0000439
Pfam:PF06333 Med13_C > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF06333 Med13_C > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF06333 Med13_C > GO:mediator complex ; GO:0016592
Pfam:PF06337 DUSP > GO:ubiquitin-specific protease activity ; GO:0004843
Pfam:PF06338 ComK > GO:establishment of competence for transformation ; GO:0030420
Pfam:PF06339 Ectoine_synth > GO:ectoine synthase activity ; GO:0033990
Pfam:PF06339 Ectoine_synth > GO:ectoine biosynthetic process ; GO:0019491
Pfam:PF06344 Parecho_VpG > GO:viral genome ; GO:0019015
Pfam:PF06350 HSL_N > GO:lipase activity ; GO:0016298
Pfam:PF06350 HSL_N > GO:cholesterol metabolic process ; GO:0008203
Pfam:PF06350 HSL_N > GO:lipid catabolic process ; GO:0016042
Pfam:PF06351 Allene_ox_cyc > GO:isomerase activity ; GO:0016853
Pfam:PF06351 Allene_ox_cyc > GO:chloroplast ; GO:0009507
Pfam:PF06355 Aegerolysin > GO:hemolysis by symbiont of host erythrocytes ; GO:0019836
Pfam:PF06357 Omega-toxin > GO:calcium channel inhibitor activity ; GO:0019855
Pfam:PF06357 Omega-toxin > GO:defense response ; GO:0006952
Pfam:PF06357 Omega-toxin > GO:pathogenesis ; GO:0009405
Pfam:PF06357 Omega-toxin > GO:extracellular region ; GO:0005576
Pfam:PF06363 Picorna_P3A > GO:virion ; GO:0019012
Pfam:PF06367 Drf_FH3 > GO:actin binding ; GO:0003779
Pfam:PF06367 Drf_FH3 > GO:cellular component organization ; GO:0016043
Pfam:PF06368 Met_asp_mut_E > GO:intramolecular transferase activity ; GO:0016866
Pfam:PF06368 Met_asp_mut_E > GO:cobalamin binding ; GO:0031419
Pfam:PF06368 Met_asp_mut_E > GO:anaerobic glutamate catabolic process ; GO:0019670
Pfam:PF06369 Anemone_cytotox > GO:channel activity ; GO:0015267
Pfam:PF06369 Anemone_cytotox > GO:cation transport ; GO:0006812
Pfam:PF06369 Anemone_cytotox > GO:pore complex assembly ; GO:0046931
Pfam:PF06369 Anemone_cytotox > GO:hemolysis in other organism involved in symbiotic interaction ; GO:0052331
Pfam:PF06369 Anemone_cytotox > GO:pore complex ; GO:0046930
Pfam:PF06371 Drf_GBD > GO:actin binding ; GO:0003779
Pfam:PF06371 Drf_GBD > GO:Rho GTPase binding ; GO:0017048
Pfam:PF06371 Drf_GBD > GO:actin cytoskeleton organization ; GO:0030036
Pfam:PF06372 Gemin6 > GO:spliceosomal complex assembly ; GO:0000245
Pfam:PF06372 Gemin6 > GO:nucleus ; GO:0005634
Pfam:PF06373 CART > GO:activation of MAPKK activity ; GO:0000186
Pfam:PF06373 CART > GO:cellular glucose homeostasis ; GO:0001678
Pfam:PF06373 CART > GO:G-protein coupled receptor signaling pathway ; GO:0007186
Pfam:PF06373 CART > GO:adult feeding behavior ; GO:0008343
Pfam:PF06373 CART > GO:cellular response to starvation ; GO:0009267
Pfam:PF06373 CART > GO:negative regulation of appetite ; GO:0032099
Pfam:PF06373 CART > GO:extracellular space ; GO:0005615
Pfam:PF06374 NDUF_C2 > GO:NADH dehydrogenase (ubiquinone) activity ; GO:0008137
Pfam:PF06374 NDUF_C2 > GO:mitochondrial electron transport, NADH to ubiquinone ; GO:0006120
Pfam:PF06374 NDUF_C2 > GO:mitochondrial inner membrane ; GO:0005743
Pfam:PF06377 Adipokin_hormo > GO:hormone activity ; GO:0005179
Pfam:PF06379 RhaT > GO:rhamnose transmembrane transporter activity ; GO:0015153
Pfam:PF06379 RhaT > GO:hexose transport ; GO:0008645
Pfam:PF06379 RhaT > GO:integral component of membrane ; GO:0016021
Pfam:PF06384 ICAT > GO:beta-catenin binding ; GO:0008013
Pfam:PF06385 Baculo_LEF-11 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF06385 Baculo_LEF-11 > GO:viral life cycle ; GO:0019058
Pfam:PF06386 GvpL_GvpF > GO:gas vesicle organization ; GO:0031412
Pfam:PF06386 GvpL_GvpF > GO:gas vesicle ; GO:0031411
Pfam:PF06387 Calcyon > GO:clathrin light chain binding ; GO:0032051
Pfam:PF06387 Calcyon > GO:dopamine receptor signaling pathway ; GO:0007212
Pfam:PF06387 Calcyon > GO:clathrin coat assembly ; GO:0048268
Pfam:PF06387 Calcyon > GO:integral component of membrane ; GO:0016021
Pfam:PF06389 Filo_VP24 > GO:structural molecule activity ; GO:0005198
Pfam:PF06389 Filo_VP24 > GO:viral process ; GO:0016032
Pfam:PF06389 Filo_VP24 > GO:membrane ; GO:0016020
Pfam:PF06391 MAT1 > GO:cell cycle ; GO:0007049
Pfam:PF06391 MAT1 > GO:nucleus ; GO:0005634
Pfam:PF06392 Asr > GO:response to acidity ; GO:0010447
Pfam:PF06392 Asr > GO:periplasmic space ; GO:0042597
Pfam:PF06393 BID > GO:positive regulation of apoptotic process ; GO:0043065
Pfam:PF06393 BID > GO:cytoplasm ; GO:0005737
Pfam:PF06397 Desulfoferrod_N > GO:iron ion binding ; GO:0005506
Pfam:PF06399 GFRP > GO:negative regulation of biosynthetic process ; GO:0009890
Pfam:PF06401 Alpha-2-MRAP_C > GO:heparin binding ; GO:0008201
Pfam:PF06401 Alpha-2-MRAP_C > GO:low-density lipoprotein particle receptor binding ; GO:0050750
Pfam:PF06401 Alpha-2-MRAP_C > GO:endoplasmic reticulum ; GO:0005783
Pfam:PF06403 Lamprin > GO:structural molecule activity ; GO:0005198
Pfam:PF06403 Lamprin > GO:proteinaceous extracellular matrix ; GO:0005578
Pfam:PF06404 PSK > GO:growth factor activity ; GO:0008083
Pfam:PF06404 PSK > GO:cell proliferation ; GO:0008283
Pfam:PF06404 PSK > GO:extracellular region ; GO:0005576
Pfam:PF06412 TraD > GO:conjugation ; GO:0000746
Pfam:PF06414 Zeta_toxin > GO:ATP binding ; GO:0005524
Pfam:PF06414 Zeta_toxin > GO:kinase activity ; GO:0016301
Pfam:PF06415 iPGM_N > GO:phosphoglycerate mutase activity ; GO:0004619
Pfam:PF06415 iPGM_N > GO:manganese ion binding ; GO:0030145
Pfam:PF06415 iPGM_N > GO:glucose catabolic process ; GO:0006007
Pfam:PF06415 iPGM_N > GO:cytoplasm ; GO:0005737
Pfam:PF06416 DUF1076 > GO:ubiquitin-protein transferase activity ; GO:0004842
Pfam:PF06416 DUF1076 > GO:parasitism ; GO:0072519
Pfam:PF06418 CTP_synth_N > GO:CTP synthase activity ; GO:0003883
Pfam:PF06418 CTP_synth_N > GO:pyrimidine nucleotide biosynthetic process ; GO:0006221
Pfam:PF06419 COG6 > GO:intra-Golgi vesicle-mediated transport ; GO:0006891
Pfam:PF06419 COG6 > GO:Golgi transport complex ; GO:0017119
Pfam:PF06420 Mgm101p > GO:mitochondrial genome maintenance ; GO:0000002
Pfam:PF06420 Mgm101p > GO:mitochondrial chromosome ; GO:0000262
Pfam:PF06422 PDR_CDR > GO:ATP binding ; GO:0005524
Pfam:PF06422 PDR_CDR > GO:ATPase activity, coupled to transmembrane movement of substances ; GO:0042626
Pfam:PF06422 PDR_CDR > GO:transport ; GO:0006810
Pfam:PF06422 PDR_CDR > GO:integral component of membrane ; GO:0016021
Pfam:PF06423 GWT1 > GO:transferase activity, transferring acyl groups ; GO:0016746
Pfam:PF06423 GWT1 > GO:GPI anchor biosynthetic process ; GO:0006506
Pfam:PF06423 GWT1 > GO:endoplasmic reticulum membrane ; GO:0005789
Pfam:PF06423 GWT1 > GO:integral component of membrane ; GO:0016021
Pfam:PF06424 PRP1_N > GO:mRNA splicing, via spliceosome ; GO:0000398
Pfam:PF06424 PRP1_N > GO:nucleus ; GO:0005634
Pfam:PF06426 SATase_N > GO:serine O-acetyltransferase activity ; GO:0009001
Pfam:PF06426 SATase_N > GO:cysteine biosynthetic process from serine ; GO:0006535
Pfam:PF06426 SATase_N > GO:cytoplasm ; GO:0005737
Pfam:PF06427 UDP-g_GGTase > GO:UDP-glucose:glycoprotein glucosyltransferase activity ; GO:0003980
Pfam:PF06427 UDP-g_GGTase > GO:protein glycosylation ; GO:0006486
Pfam:PF06431 Polyoma_lg_T_C > GO:DNA binding ; GO:0003677
Pfam:PF06431 Polyoma_lg_T_C > GO:ATP binding ; GO:0005524
Pfam:PF06431 Polyoma_lg_T_C > GO:DNA replication ; GO:0006260
Pfam:PF06432 GPI2 > GO:phosphatidylinositol N-acetylglucosaminyltransferase activity ; GO:0017176
Pfam:PF06432 GPI2 > GO:GPI anchor biosynthetic process ; GO:0006506
Pfam:PF06432 GPI2 > GO:integral component of membrane ; GO:0016021
Pfam:PF06433 Me-amine-dh_H > GO:amine dehydrogenase activity ; GO:0030058
Pfam:PF06433 Me-amine-dh_H > GO:oxidation-reduction process ; GO:0055114
Pfam:PF06433 Me-amine-dh_H > GO:periplasmic space ; GO:0042597
Pfam:PF06434 Aconitase_2_N > GO:aconitate hydratase activity ; GO:0003994
Pfam:PF06434 Aconitase_2_N > GO:tricarboxylic acid cycle ; GO:0006099
Pfam:PF06436 Pneumovirus_M2 > GO:structural molecule activity ; GO:0005198
Pfam:PF06436 Pneumovirus_M2 > GO:regulation of viral transcription ; GO:0046782
Pfam:PF06436 Pneumovirus_M2 > GO:virion ; GO:0019012
Pfam:PF06437 ISN1 > GO:magnesium ion binding ; GO:0000287
Pfam:PF06437 ISN1 > GO:phosphatase activity ; GO:0016791
Pfam:PF06437 ISN1 > GO:nucleotide metabolic process ; GO:0009117
Pfam:PF06440 DNA_pol3_theta > GO:DNA binding ; GO:0003677
Pfam:PF06440 DNA_pol3_theta > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF06440 DNA_pol3_theta > GO:DNA replication ; GO:0006260
Pfam:PF06442 DHFR_2 > GO:dihydrofolate reductase activity ; GO:0004146
Pfam:PF06442 DHFR_2 > GO:response to drug ; GO:0042493
Pfam:PF06442 DHFR_2 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF06444 NADH_dehy_S2_C > GO:NADH dehydrogenase (ubiquinone) activity ; GO:0008137
Pfam:PF06444 NADH_dehy_S2_C > GO:mitochondrial electron transport, NADH to ubiquinone ; GO:0006120
Pfam:PF06444 NADH_dehy_S2_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF06446 Hepcidin > GO:cellular iron ion homeostasis ; GO:0006879
Pfam:PF06446 Hepcidin > GO:extracellular region ; GO:0005576
Pfam:PF06448 DUF1081 > GO:lipid transporter activity ; GO:0005319
Pfam:PF06448 DUF1081 > GO:lipid transport ; GO:0006869
Pfam:PF06449 DUF1082 > GO:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances ; GO:0016820
Pfam:PF06449 DUF1082 > GO:mitochondrion ; GO:0005739
Pfam:PF06449 DUF1082 > GO:integral component of membrane ; GO:0016021
Pfam:PF06450 NhaB > GO:sodium:proton antiporter activity ; GO:0015385
Pfam:PF06450 NhaB > GO:sodium ion transport ; GO:0006814
Pfam:PF06450 NhaB > GO:integral component of membrane ; GO:0016021
Pfam:PF06451 Moricin > GO:defense response to bacterium ; GO:0042742
Pfam:PF06451 Moricin > GO:extracellular region ; GO:0005576
Pfam:PF06452 DUF1083 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF06452 DUF1083 > GO:carbohydrate binding ; GO:0030246
Pfam:PF06452 DUF1083 > GO:carbohydrate catabolic process ; GO:0016052
Pfam:PF06453 LT-IIB > GO:pathogenesis ; GO:0009405
Pfam:PF06453 LT-IIB > GO:extracellular region ; GO:0005576
Pfam:PF06455 NADH5_C > GO:NADH dehydrogenase (ubiquinone) activity ; GO:0008137
Pfam:PF06455 NADH5_C > GO:ATP synthesis coupled electron transport ; GO:0042773
Pfam:PF06455 NADH5_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF06456 Arfaptin > GO:protein domain specific binding ; GO:0019904
Pfam:PF06457 Ectatomin > GO:ion channel activity ; GO:0005216
Pfam:PF06457 Ectatomin > GO:pathogenesis ; GO:0009405
Pfam:PF06457 Ectatomin > GO:extracellular region ; GO:0005576
Pfam:PF06459 RR_TM4-6 > GO:ryanodine-sensitive calcium-release channel activity ; GO:0005219
Pfam:PF06459 RR_TM4-6 > GO:cellular calcium ion homeostasis ; GO:0006874
Pfam:PF06459 RR_TM4-6 > GO:integral component of membrane ; GO:0016021
Pfam:PF06463 Mob_synth_C > GO:4 iron, 4 sulfur cluster binding ; GO:0051539
Pfam:PF06463 Mob_synth_C > GO:Mo-molybdopterin cofactor biosynthetic process ; GO:0006777
Pfam:PF06463 Mob_synth_C > GO:molybdopterin synthase complex ; GO:0019008
Pfam:PF06464 DMAP_binding > GO:transcription factor binding ; GO:0008134
Pfam:PF06464 DMAP_binding > GO:nucleus ; GO:0005634
Pfam:PF06466 PCAF_N > GO:histone acetyltransferase activity ; GO:0004402
Pfam:PF06466 PCAF_N > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF06466 PCAF_N > GO:nucleus ; GO:0005634
Pfam:PF06467 zf-FCS > GO:zinc ion binding ; GO:0008270
Pfam:PF06470 SMC_hinge > GO:protein binding ; GO:0005515
Pfam:PF06470 SMC_hinge > GO:ATP binding ; GO:0005524
Pfam:PF06470 SMC_hinge > GO:chromosome organization ; GO:0051276
Pfam:PF06470 SMC_hinge > GO:chromosome ; GO:0005694
Pfam:PF06471 NSP11 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF06471 NSP11 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF06471 NSP11 > GO:methyltransferase activity ; GO:0008168
Pfam:PF06471 NSP11 > GO:exoribonuclease activity, producing 5'-phosphomonoesters ; GO:0016896
Pfam:PF06472 ABC_membrane_2 > GO:transport ; GO:0006810
Pfam:PF06472 ABC_membrane_2 > GO:membrane ; GO:0016020
Pfam:PF06478 Corona_RPol_N > GO:RNA binding ; GO:0003723
Pfam:PF06478 Corona_RPol_N > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF06478 Corona_RPol_N > GO:ATP binding ; GO:0005524
Pfam:PF06478 Corona_RPol_N > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF06479 Ribonuc_2-5A > GO:ribonuclease activity ; GO:0004540
Pfam:PF06479 Ribonuc_2-5A > GO:mRNA processing ; GO:0006397
Pfam:PF06480 FtsH_ext > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF06480 FtsH_ext > GO:ATP binding ; GO:0005524
Pfam:PF06480 FtsH_ext > GO:zinc ion binding ; GO:0008270
Pfam:PF06480 FtsH_ext > GO:integral component of membrane ; GO:0016021
Pfam:PF06481 COX_ARM > GO:cytochrome o ubiquinol oxidase activity ; GO:0008827
Pfam:PF06481 COX_ARM > GO:electron transport chain ; GO:0022900
Pfam:PF06481 COX_ARM > GO:oxidation-reduction process ; GO:0055114
Pfam:PF06481 COX_ARM > GO:integral component of membrane ; GO:0016021
Pfam:PF06482 Endostatin > GO:structural molecule activity ; GO:0005198
Pfam:PF06482 Endostatin > GO:cell adhesion ; GO:0007155
Pfam:PF06482 Endostatin > GO:extracellular matrix ; GO:0031012
Pfam:PF06484 Ten_N > GO:signal transduction ; GO:0007165
Pfam:PF06484 Ten_N > GO:integral component of membrane ; GO:0016021
Pfam:PF06495 Transformer > GO:mRNA processing ; GO:0006397
Pfam:PF06495 Transformer > GO:female sex differentiation ; GO:0046660
Pfam:PF06495 Transformer > GO:nucleus ; GO:0005634
Pfam:PF06506 PrpR_N > GO:phosphorelay response regulator activity ; GO:0000156
Pfam:PF06506 PrpR_N > GO:DNA binding ; GO:0003677
Pfam:PF06506 PrpR_N > GO:ATP binding ; GO:0005524
Pfam:PF06506 PrpR_N > GO:phosphorelay signal transduction system ; GO:0000160
Pfam:PF06507 Auxin_resp > GO:DNA binding ; GO:0003677
Pfam:PF06507 Auxin_resp > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF06507 Auxin_resp > GO:response to hormone ; GO:0009725
Pfam:PF06507 Auxin_resp > GO:nucleus ; GO:0005634
Pfam:PF06511 IpaD > GO:pathogenesis ; GO:0009405
Pfam:PF06512 Na_trans_assoc > GO:voltage-gated sodium channel activity ; GO:0005248
Pfam:PF06512 Na_trans_assoc > GO:sodium ion transport ; GO:0006814
Pfam:PF06512 Na_trans_assoc > GO:voltage-gated sodium channel complex ; GO:0001518
Pfam:PF06514 PsbU > GO:photosynthesis ; GO:0015979
Pfam:PF06514 PsbU > GO:photosystem II stabilization ; GO:0042549
Pfam:PF06514 PsbU > GO:photosystem II ; GO:0009523
Pfam:PF06514 PsbU > GO:photosystem II oxygen evolving complex ; GO:0009654
Pfam:PF06514 PsbU > GO:extrinsic component of membrane ; GO:0019898
Pfam:PF06516 NUP > GO:transmembrane transport ; GO:0055085
Pfam:PF06519 TolA > GO:transporter activity ; GO:0005215
Pfam:PF06519 TolA > GO:transport ; GO:0006810
Pfam:PF06519 TolA > GO:membrane ; GO:0016020
Pfam:PF06524 NOA36 > GO:zinc ion binding ; GO:0008270
Pfam:PF06524 NOA36 > GO:nucleus ; GO:0005634
Pfam:PF06529 Vert_IL3-reg_TF > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF06529 Vert_IL3-reg_TF > GO:circadian rhythm ; GO:0007623
Pfam:PF06529 Vert_IL3-reg_TF > GO:nucleus ; GO:0005634
Pfam:PF06530 Phage_antitermQ > GO:DNA binding ; GO:0003677
Pfam:PF06530 Phage_antitermQ > GO:negative regulation of DNA-templated transcription, termination ; GO:0060567
Pfam:PF06546 Vert_HS_TF > GO:DNA binding ; GO:0003677
Pfam:PF06546 Vert_HS_TF > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF06546 Vert_HS_TF > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF06546 Vert_HS_TF > GO:nucleus ; GO:0005634
Pfam:PF06553 BNIP3 > GO:positive regulation of apoptotic process ; GO:0043065
Pfam:PF06553 BNIP3 > GO:mitochondrial envelope ; GO:0005740
Pfam:PF06553 BNIP3 > GO:integral component of membrane ; GO:0016021
Pfam:PF06554 Olfactory_mark > GO:signal transducer activity ; GO:0004871
Pfam:PF06554 Olfactory_mark > GO:signal transduction ; GO:0007165
Pfam:PF06554 Olfactory_mark > GO:sensory perception of smell ; GO:0007608
Pfam:PF06558 SecM > GO:translation regulator activity ; GO:0045182
Pfam:PF06559 DCD > GO:dCTP deaminase activity ; GO:0008829
Pfam:PF06559 DCD > GO:2'-deoxyribonucleotide metabolic process ; GO:0009394
Pfam:PF06560 GPI > GO:glucose-6-phosphate isomerase activity ; GO:0004347
Pfam:PF06560 GPI > GO:gluconeogenesis ; GO:0006094
Pfam:PF06560 GPI > GO:glycolytic process ; GO:0006096
Pfam:PF06560 GPI > GO:cytoplasm ; GO:0005737
Pfam:PF06573 Churchill > GO:zinc ion binding ; GO:0008270
Pfam:PF06573 Churchill > GO:multicellular organismal development ; GO:0007275
Pfam:PF06573 Churchill > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF06574 FAD_syn > GO:FMN adenylyltransferase activity ; GO:0003919
Pfam:PF06574 FAD_syn > GO:riboflavin biosynthetic process ; GO:0009231
Pfam:PF06578 YscK > GO:pathogenesis ; GO:0009405
Pfam:PF06580 His_kinase > GO:phosphorelay sensor kinase activity ; GO:0000155
Pfam:PF06580 His_kinase > GO:phosphorelay signal transduction system ; GO:0000160
Pfam:PF06580 His_kinase > GO:integral component of membrane ; GO:0016021
Pfam:PF06581 p31comet > GO:regulation of exit from mitosis ; GO:0007096
Pfam:PF06581 p31comet > GO:nucleus ; GO:0005634
Pfam:PF06583 Neogenin_C > GO:integral component of membrane ; GO:0016021
Pfam:PF06584 DIRP > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF06584 DIRP > GO:cell cycle ; GO:0007049
Pfam:PF06584 DIRP > GO:transcriptional repressor complex ; GO:0017053
Pfam:PF06596 PsbX > GO:photosynthesis ; GO:0015979
Pfam:PF06596 PsbX > GO:photosystem II ; GO:0009523
Pfam:PF06596 PsbX > GO:membrane ; GO:0016020
Pfam:PF06602 Myotub-related > GO:phosphatase activity ; GO:0016791
Pfam:PF06602 Myotub-related > GO:dephosphorylation ; GO:0016311
Pfam:PF06608 DUF1143 > GO:nucleus ; GO:0005634
Pfam:PF06610 DUF1144 > GO:L-amino acid efflux transmembrane transporter activity ; GO:0034639
Pfam:PF06610 DUF1144 > GO:integral component of membrane ; GO:0016021
Pfam:PF06613 KorB_C > GO:DNA binding ; GO:0003677
Pfam:PF06613 KorB_C > GO:negative regulation of transcription, DNA-templated ; GO:0045892
Pfam:PF06614 Neuromodulin > GO:regulation of growth ; GO:0040008
Pfam:PF06616 BsuBI_PstI_RE > GO:magnesium ion binding ; GO:0000287
Pfam:PF06616 BsuBI_PstI_RE > GO:DNA binding ; GO:0003677
Pfam:PF06616 BsuBI_PstI_RE > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF06616 BsuBI_PstI_RE > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF06617 M-inducer_phosp > GO:protein tyrosine phosphatase activity ; GO:0004725
Pfam:PF06617 M-inducer_phosp > GO:mitotic M phase ; GO:0000087
Pfam:PF06617 M-inducer_phosp > GO:protein dephosphorylation ; GO:0006470
Pfam:PF06617 M-inducer_phosp > GO:intracellular ; GO:0005622
Pfam:PF06621 SIM_C > GO:DNA binding ; GO:0003677
Pfam:PF06621 SIM_C > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF06621 SIM_C > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF06621 SIM_C > GO:nucleus ; GO:0005634
Pfam:PF06623 MHC_I_C > GO:immune response ; GO:0006955
Pfam:PF06623 MHC_I_C > GO:antigen processing and presentation ; GO:0019882
Pfam:PF06623 MHC_I_C > GO:membrane ; GO:0016020
Pfam:PF06623 MHC_I_C > GO:MHC class I protein complex ; GO:0042612
Pfam:PF06624 RAMP4 > GO:endoplasmic reticulum ; GO:0005783
Pfam:PF06631 DUF1154 > GO:phosphatidylinositol phospholipase C activity ; GO:0004435
Pfam:PF06631 DUF1154 > GO:calcium ion binding ; GO:0005509
Pfam:PF06631 DUF1154 > GO:lipid metabolic process ; GO:0006629
Pfam:PF06632 XRCC4 > GO:DNA binding ; GO:0003677
Pfam:PF06632 XRCC4 > GO:double-strand break repair ; GO:0006302
Pfam:PF06632 XRCC4 > GO:DNA recombination ; GO:0006310
Pfam:PF06632 XRCC4 > GO:nucleus ; GO:0005634
Pfam:PF06635 NolV > GO:nodulation ; GO:0009877
Pfam:PF06638 Strabismus > GO:multicellular organismal development ; GO:0007275
Pfam:PF06638 Strabismus > GO:integral component of membrane ; GO:0016021
Pfam:PF06644 ATP11 > GO:protein complex assembly ; GO:0006461
Pfam:PF06644 ATP11 > GO:mitochondrion ; GO:0005739
Pfam:PF06645 SPC12 > GO:peptidase activity ; GO:0008233
Pfam:PF06645 SPC12 > GO:signal peptide processing ; GO:0006465
Pfam:PF06645 SPC12 > GO:signal peptidase complex ; GO:0005787
Pfam:PF06645 SPC12 > GO:integral component of membrane ; GO:0016021
Pfam:PF06646 Mycoplasma_p37 > GO:transporter activity ; GO:0005215
Pfam:PF06646 Mycoplasma_p37 > GO:transport ; GO:0006810
Pfam:PF06646 Mycoplasma_p37 > GO:membrane ; GO:0016020
Pfam:PF06652 Methuselah_N > GO:G-protein coupled receptor activity ; GO:0004930
Pfam:PF06652 Methuselah_N > GO:response to stress ; GO:0006950
Pfam:PF06657 Cep57_MT_bd > GO:microtubule binding ; GO:0008017
Pfam:PF06662 C5-epim_C > GO:racemase and epimerase activity, acting on carbohydrates and derivatives ; GO:0016857
Pfam:PF06662 C5-epim_C > GO:glycosaminoglycan biosynthetic process ; GO:0006024
Pfam:PF06662 C5-epim_C > GO:integral component of membrane ; GO:0016021
Pfam:PF06663 DUF1170 > GO:regulation of signal transduction ; GO:0009966
Pfam:PF06663 DUF1170 > GO:cytoplasm ; GO:0005737
Pfam:PF06663 DUF1170 > GO:membrane ; GO:0016020
Pfam:PF06667 PspB > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF06667 PspB > GO:phage shock ; GO:0009271
Pfam:PF06668 ITI_HC_C > GO:serine-type endopeptidase inhibitor activity ; GO:0004867
Pfam:PF06668 ITI_HC_C > GO:hyaluronan metabolic process ; GO:0030212
Pfam:PF06689 zf-C4_ClpX > GO:zinc ion binding ; GO:0008270
Pfam:PF06689 zf-C4_ClpX > GO:protein dimerization activity ; GO:0046983
Pfam:PF06699 PIG-F > GO:GPI anchor biosynthetic process ; GO:0006506
Pfam:PF06699 PIG-F > GO:endoplasmic reticulum membrane ; GO:0005789
Pfam:PF06699 PIG-F > GO:integral component of membrane ; GO:0016021
Pfam:PF06701 MIB_HERC2 > GO:ubiquitin-protein transferase activity ; GO:0004842
Pfam:PF06701 MIB_HERC2 > GO:metal ion binding ; GO:0046872
Pfam:PF06701 MIB_HERC2 > GO:protein ubiquitination ; GO:0016567
Pfam:PF06703 SPC25 > GO:peptidase activity ; GO:0008233
Pfam:PF06703 SPC25 > GO:signal peptide processing ; GO:0006465
Pfam:PF06703 SPC25 > GO:signal peptidase complex ; GO:0005787
Pfam:PF06703 SPC25 > GO:integral component of membrane ; GO:0016021
Pfam:PF06723 MreB_Mbl > GO:cell morphogenesis ; GO:0000902
Pfam:PF06725 3D > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF06725 3D > GO:peptidoglycan turnover ; GO:0009254
Pfam:PF06725 3D > GO:outer membrane ; GO:0019867
Pfam:PF06728 PIG-U > GO:GPI anchor biosynthetic process ; GO:0006506
Pfam:PF06728 PIG-U > GO:integral component of membrane ; GO:0016021
Pfam:PF06729 CENP-R > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF06729 CENP-R > GO:centromere-specific nucleosome assembly ; GO:0034080
Pfam:PF06732 Pescadillo_N > GO:ribosome biogenesis ; GO:0042254
Pfam:PF06732 Pescadillo_N > GO:nucleolus ; GO:0005730
Pfam:PF06733 DEAD_2 > GO:DNA binding ; GO:0003677
Pfam:PF06733 DEAD_2 > GO:ATP-dependent DNA helicase activity ; GO:0004003
Pfam:PF06733 DEAD_2 > GO:ATP binding ; GO:0005524
Pfam:PF06734 UL97 > GO:protein kinase activity ; GO:0004672
Pfam:PF06734 UL97 > GO:ATP binding ; GO:0005524
Pfam:PF06734 UL97 > GO:viral process ; GO:0016032
Pfam:PF06740 DUF1213 > GO:microtubule cytoskeleton organization ; GO:0000226
Pfam:PF06743 FAST_1 > GO:protein kinase activity ; GO:0004672
Pfam:PF06751 EutB > GO:ethanolamine ammonia-lyase activity ; GO:0008851
Pfam:PF06751 EutB > GO:cellular amino acid metabolic process ; GO:0006520
Pfam:PF06753 Bradykinin > GO:hormone activity ; GO:0005179
Pfam:PF06753 Bradykinin > GO:response to stress ; GO:0006950
Pfam:PF06753 Bradykinin > GO:extracellular region ; GO:0005576
Pfam:PF06754 PhnG > GO:organic phosphonate transport ; GO:0015716
Pfam:PF06754 PhnG > GO:organic phosphonate metabolic process ; GO:0019634
Pfam:PF06756 S19 > GO:multicellular organismal development ; GO:0007275
Pfam:PF06756 S19 > GO:chorion ; GO:0042600
Pfam:PF06766 Hydrophobin_2 > GO:extracellular region ; GO:0005576
Pfam:PF06769 Plasmid_Txe > GO:endonuclease activity ; GO:0004519
Pfam:PF06769 Plasmid_Txe > GO:RNA catabolic process ; GO:0006401
Pfam:PF06777 DUF1227 > GO:nucleus ; GO:0005634
Pfam:PF06783 UPF0239 > GO:integral component of membrane ; GO:0016021
Pfam:PF06784 UPF0240 > GO:mitochondrial respiratory chain complex I assembly ; GO:0032981
Pfam:PF06788 UPF0257 > GO:plasma membrane ; GO:0005886
Pfam:PF06800 Sugar_transport > GO:carbohydrate transmembrane transporter activity ; GO:0015144
Pfam:PF06800 Sugar_transport > GO:carbohydrate transmembrane transport ; GO:0034219
Pfam:PF06800 Sugar_transport > GO:integral component of membrane ; GO:0016021
Pfam:PF06809 NPDC1 > GO:integral component of membrane ; GO:0016021
Pfam:PF06810 Phage_GP20 > GO:structural molecule activity ; GO:0005198
Pfam:PF06814 Lung_7-TM_R > GO:integral component of membrane ; GO:0016021
Pfam:PF06815 RVT_connect > GO:RNA-directed DNA polymerase activity ; GO:0003964
Pfam:PF06815 RVT_connect > GO:RNA-dependent DNA replication ; GO:0006278
Pfam:PF06816 NOD > GO:cell differentiation ; GO:0030154
Pfam:PF06816 NOD > GO:integral component of membrane ; GO:0016021
Pfam:PF06817 RVT_thumb > GO:RNA-directed DNA polymerase activity ; GO:0003964
Pfam:PF06817 RVT_thumb > GO:RNA-dependent DNA replication ; GO:0006278
Pfam:PF06818 Fez1 > GO:cytoplasm ; GO:0005737
Pfam:PF06818 Fez1 > GO:membrane ; GO:0016020
Pfam:PF06821 Ser_hydrolase > GO:hydrolase activity ; GO:0016787
Pfam:PF06827 zf-FPG_IleRS > GO:catalytic activity ; GO:0003824
Pfam:PF06831 H2TH > GO:damaged DNA binding ; GO:0003684
Pfam:PF06831 H2TH > GO:DNA-(apurinic or apyrimidinic site) lyase activity ; GO:0003906
Pfam:PF06831 H2TH > GO:zinc ion binding ; GO:0008270
Pfam:PF06831 H2TH > GO:hydrolase activity, hydrolyzing N-glycosyl compounds ; GO:0016799
Pfam:PF06831 H2TH > GO:nucleotide-excision repair ; GO:0006289
Pfam:PF06839 zf-GRF > GO:zinc ion binding ; GO:0008270
Pfam:PF06841 Phage_T4_gp19 > GO:structural molecule activity ; GO:0005198
Pfam:PF06849 DUF1246 > GO:magnesium ion binding ; GO:0000287
Pfam:PF06849 DUF1246 > GO:ATP binding ; GO:0005524
Pfam:PF06849 DUF1246 > GO:ligase activity, forming carbon-nitrogen bonds ; GO:0016879
Pfam:PF06849 DUF1246 > GO:IMP biosynthetic process ; GO:0006188
Pfam:PF06858 NOG1 > GO:GTP binding ; GO:0005525
Pfam:PF06859 Bin3 > GO:methyltransferase activity ; GO:0008168
Pfam:PF06862 DUF1253 > GO:nucleus ; GO:0005634
Pfam:PF06870 RNA_pol_I_A49 > GO:DNA binding ; GO:0003677
Pfam:PF06870 RNA_pol_I_A49 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF06870 RNA_pol_I_A49 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF06870 RNA_pol_I_A49 > GO:nucleus ; GO:0005634
Pfam:PF06872 EspG > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF06872 EspG > GO:pathogenesis ; GO:0009405
Pfam:PF06874 FBPase_2 > GO:fructose 1,6-bisphosphate 1-phosphatase activity ; GO:0042132
Pfam:PF06874 FBPase_2 > GO:gluconeogenesis ; GO:0006094
Pfam:PF06876 SCRL > GO:signal transduction ; GO:0007165
Pfam:PF06881 Elongin_A > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF06881 Elongin_A > GO:nucleus ; GO:0005634
Pfam:PF06881 Elongin_A > GO:integral component of membrane ; GO:0016021
Pfam:PF06883 RNA_pol_Rpa2_4 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF06883 RNA_pol_Rpa2_4 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF06883 RNA_pol_Rpa2_4 > GO:nucleus ; GO:0005634
Pfam:PF06888 Put_Phosphatase > GO:phosphatase activity ; GO:0016791
Pfam:PF06899 WzyE > GO:integral component of membrane ; GO:0016021
Pfam:PF06905 FAIM1 > GO:negative regulation of apoptotic process ; GO:0043066
Pfam:PF06910 MEA1 > GO:spermatogenesis ; GO:0007283
Pfam:PF06917 Pectate_lyase_2 > GO:carbon-oxygen lyase activity, acting on polysaccharides ; GO:0016837
Pfam:PF06917 Pectate_lyase_2 > GO:pectin catabolic process ; GO:0045490
Pfam:PF06917 Pectate_lyase_2 > GO:periplasmic space ; GO:0042597
Pfam:PF06925 MGDG_synth > GO:transferase activity, transferring hexosyl groups ; GO:0016758
Pfam:PF06925 MGDG_synth > GO:glycolipid biosynthetic process ; GO:0009247
Pfam:PF06929 Rotavirus_VP3 > GO:GTP binding ; GO:0005525
Pfam:PF06929 Rotavirus_VP3 > GO:viral process ; GO:0016032
Pfam:PF06929 Rotavirus_VP3 > GO:viral nucleocapsid ; GO:0019013
Pfam:PF06936 Selenoprotein_S > GO:selenium binding ; GO:0008430
Pfam:PF06936 Selenoprotein_S > GO:intracellular protein transport ; GO:0006886
Pfam:PF06936 Selenoprotein_S > GO:integral component of endoplasmic reticulum membrane ; GO:0030176
Pfam:PF06941 NT5C > GO:5'-nucleotidase activity ; GO:0008253
Pfam:PF06941 NT5C > GO:deoxyribonucleotide catabolic process ; GO:0009264
Pfam:PF06951 PLA2G12 > GO:phospholipase A2 activity ; GO:0004623
Pfam:PF06951 PLA2G12 > GO:calcium ion binding ; GO:0005509
Pfam:PF06951 PLA2G12 > GO:lipid catabolic process ; GO:0016042
Pfam:PF06951 PLA2G12 > GO:extracellular region ; GO:0005576
Pfam:PF06953 ArsD > GO:DNA binding ; GO:0003677
Pfam:PF06953 ArsD > GO:negative regulation of transcription, DNA-templated ; GO:0045892
Pfam:PF06953 ArsD > GO:response to arsenic-containing substance ; GO:0046685
Pfam:PF06954 Resistin > GO:hormone activity ; GO:0005179
Pfam:PF06954 Resistin > GO:extracellular region ; GO:0005576
Pfam:PF06955 XET_C > GO:xyloglucan:xyloglucosyl transferase activity ; GO:0016762
Pfam:PF06955 XET_C > GO:cellular glucan metabolic process ; GO:0006073
Pfam:PF06955 XET_C > GO:cell wall ; GO:0005618
Pfam:PF06955 XET_C > GO:apoplast ; GO:0048046
Pfam:PF06957 COPI_C > GO:structural molecule activity ; GO:0005198
Pfam:PF06957 COPI_C > GO:protein binding ; GO:0005515
Pfam:PF06957 COPI_C > GO:intracellular protein transport ; GO:0006886
Pfam:PF06957 COPI_C > GO:vesicle-mediated transport ; GO:0016192
Pfam:PF06957 COPI_C > GO:COPI vesicle coat ; GO:0030126
Pfam:PF06958 Pyocin_S > GO:pathogenesis ; GO:0009405
Pfam:PF06963 FPN1 > GO:iron ion transmembrane transporter activity ; GO:0005381
Pfam:PF06963 FPN1 > GO:iron ion transmembrane transport ; GO:0034755
Pfam:PF06963 FPN1 > GO:integral component of membrane ; GO:0016021
Pfam:PF06964 Alpha-L-AF_C > GO:alpha-L-arabinofuranosidase activity ; GO:0046556
Pfam:PF06964 Alpha-L-AF_C > GO:L-arabinose metabolic process ; GO:0046373
Pfam:PF06965 Na_H_antiport_1 > GO:sodium ion transport ; GO:0006814
Pfam:PF06965 Na_H_antiport_1 > GO:regulation of pH ; GO:0006885
Pfam:PF06965 Na_H_antiport_1 > GO:integral component of membrane ; GO:0016021
Pfam:PF06971 Put_DNA-bind_N > GO:negative regulation of transcription, DNA-templated ; GO:0045892
Pfam:PF06971 Put_DNA-bind_N > GO:response to redox state ; GO:0051775
Pfam:PF06971 Put_DNA-bind_N > GO:cytoplasm ; GO:0005737
Pfam:PF06973 DUF1297 > GO:magnesium ion binding ; GO:0000287
Pfam:PF06973 DUF1297 > GO:ATP binding ; GO:0005524
Pfam:PF06973 DUF1297 > GO:ligase activity, forming carbon-nitrogen bonds ; GO:0016879
Pfam:PF06973 DUF1297 > GO:IMP biosynthetic process ; GO:0006188
Pfam:PF06974 DUF1298 > GO:diacylglycerol O-acyltransferase activity ; GO:0004144
Pfam:PF06978 POP1 > GO:ribonuclease P activity ; GO:0004526
Pfam:PF06978 POP1 > GO:tRNA 5'-leader removal ; GO:0001682
Pfam:PF06984 MRP-L47 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF06984 MRP-L47 > GO:translation ; GO:0006412
Pfam:PF06984 MRP-L47 > GO:mitochondrial ribosome ; GO:0005761
Pfam:PF06988 NifT > GO:nitrogen fixation ; GO:0009399
Pfam:PF06989 BAALC_N > GO:cytoplasm ; GO:0005737
Pfam:PF06990 Gal-3-0_sulfotr > GO:galactosylceramide sulfotransferase activity ; GO:0001733
Pfam:PF06990 Gal-3-0_sulfotr > GO:biosynthetic process ; GO:0009058
Pfam:PF06990 Gal-3-0_sulfotr > GO:Golgi apparatus ; GO:0005794
Pfam:PF06990 Gal-3-0_sulfotr > GO:integral component of membrane ; GO:0016021
Pfam:PF06992 Phage_lambda_P > GO:DNA replication initiation ; GO:0006270
Pfam:PF06994 Involucrin2 > GO:keratinocyte differentiation ; GO:0030216
Pfam:PF06994 Involucrin2 > GO:cornified envelope ; GO:0001533
Pfam:PF07012 Curlin_rpt > GO:cell adhesion ; GO:0007155
Pfam:PF07012 Curlin_rpt > GO:pilus ; GO:0009289
Pfam:PF07022 Phage_CI_repr > GO:DNA binding ; GO:0003677
Pfam:PF07022 Phage_CI_repr > GO:negative regulation of transcription, DNA-templated ; GO:0045892
Pfam:PF07034 ORC3_N > GO:DNA binding ; GO:0003677
Pfam:PF07034 ORC3_N > GO:DNA replication ; GO:0006260
Pfam:PF07034 ORC3_N > GO:nuclear origin of replication recognition complex ; GO:0005664
Pfam:PF07043 DUF1328 > GO:plasma membrane ; GO:0005886
Pfam:PF07057 TraI > GO:DNA binding ; GO:0003677
Pfam:PF07057 TraI > GO:DNA helicase activity ; GO:0003678
Pfam:PF07057 TraI > GO:ATP binding ; GO:0005524
Pfam:PF07057 TraI > GO:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides ; GO:0016818
Pfam:PF07057 TraI > GO:conjugation ; GO:0000746
Pfam:PF07058 Myosin_HC-like > GO:microtubule binding ; GO:0008017
Pfam:PF07058 Myosin_HC-like > GO:cytoskeleton organization ; GO:0007010
Pfam:PF07062 Clc-like > GO:integral component of membrane ; GO:0016021
Pfam:PF07074 TRAP-gamma > GO:cotranslational protein targeting to membrane ; GO:0006613
Pfam:PF07074 TRAP-gamma > GO:Sec61 translocon complex ; GO:0005784
Pfam:PF07074 TRAP-gamma > GO:integral component of endoplasmic reticulum membrane ; GO:0030176
Pfam:PF07086 DUF1352 > GO:endoplasmic reticulum organization ; GO:0007029
Pfam:PF07086 DUF1352 > GO:endoplasmic reticulum membrane ; GO:0005789
Pfam:PF07088 GvpD > GO:ATP binding ; GO:0005524
Pfam:PF07095 IgaA > GO:Gram-negative-bacterium-type cell wall ; GO:0009276
Pfam:PF07095 IgaA > GO:integral component of membrane ; GO:0016021
Pfam:PF07109 Mg-por_mtran_C > GO:magnesium protoporphyrin IX methyltransferase activity ; GO:0046406
Pfam:PF07109 Mg-por_mtran_C > GO:chlorophyll biosynthetic process ; GO:0015995
Pfam:PF07111 HCR > GO:cell differentiation ; GO:0030154
Pfam:PF07111 HCR > GO:nucleus ; GO:0005634
Pfam:PF07111 HCR > GO:cytoplasm ; GO:0005737
Pfam:PF07123 PsbW > GO:photosynthesis ; GO:0015979
Pfam:PF07123 PsbW > GO:chloroplast ; GO:0009507
Pfam:PF07123 PsbW > GO:photosystem II ; GO:0009523
Pfam:PF07124 Phytoreo_P8 > GO:structural molecule activity ; GO:0005198
Pfam:PF07124 Phytoreo_P8 > GO:viral capsid ; GO:0019028
Pfam:PF07127 Nodulin_late > GO:metal ion binding ; GO:0046872
Pfam:PF07127 Nodulin_late > GO:nodule morphogenesis ; GO:0009878
Pfam:PF07137 VDE > GO:violaxanthin de-epoxidase activity ; GO:0046422
Pfam:PF07137 VDE > GO:oxidation-reduction process ; GO:0055114
Pfam:PF07137 VDE > GO:chloroplast ; GO:0009507
Pfam:PF07140 IFNGR1 > GO:cytokine binding ; GO:0019955
Pfam:PF07140 IFNGR1 > GO:membrane ; GO:0016020
Pfam:PF07143 CrtC > GO:oxidoreductase activity ; GO:0016491
Pfam:PF07143 CrtC > GO:photosynthesis ; GO:0015979
Pfam:PF07143 CrtC > GO:chlorophyll biosynthetic process ; GO:0015995
Pfam:PF07143 CrtC > GO:carotenoid biosynthetic process ; GO:0016117
Pfam:PF07143 CrtC > GO:oxidation-reduction process ; GO:0055114
Pfam:PF07147 PDCD9 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF07147 PDCD9 > GO:translation ; GO:0006412
Pfam:PF07147 PDCD9 > GO:mitochondrion ; GO:0005739
Pfam:PF07147 PDCD9 > GO:ribosome ; GO:0005840
Pfam:PF07148 MalM > GO:carbohydrate transport ; GO:0008643
Pfam:PF07148 MalM > GO:periplasmic space ; GO:0042597
Pfam:PF07155 ECF-ribofla_trS > GO:membrane ; GO:0016020
Pfam:PF07156 Prenylcys_lyase > GO:oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor ; GO:0016670
Pfam:PF07156 Prenylcys_lyase > GO:prenylcysteine catabolic process ; GO:0030328
Pfam:PF07156 Prenylcys_lyase > GO:oxidation-reduction process ; GO:0055114
Pfam:PF07163 Pex26 > GO:protein complex binding ; GO:0032403
Pfam:PF07163 Pex26 > GO:protein import into peroxisome membrane ; GO:0045046
Pfam:PF07163 Pex26 > GO:integral component of peroxisomal membrane ; GO:0005779
Pfam:PF07167 PhaC_N > GO:transferase activity, transferring acyl groups ; GO:0016746
Pfam:PF07167 PhaC_N > GO:poly-hydroxybutyrate biosynthetic process ; GO:0042619
Pfam:PF07174 FAP > GO:extracellular matrix binding ; GO:0050840
Pfam:PF07174 FAP > GO:extracellular region ; GO:0005576
Pfam:PF07178 TraL > GO:conjugation ; GO:0000746
Pfam:PF07178 TraL > GO:outer membrane ; GO:0019867
Pfam:PF07180 DUF1401 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF07194 P2 > GO:phosphorelay sensor kinase activity ; GO:0000155
Pfam:PF07194 P2 > GO:protein histidine kinase activity ; GO:0004673
Pfam:PF07194 P2 > GO:phosphorelay signal transduction system ; GO:0000160
Pfam:PF07194 P2 > GO:cellular component movement ; GO:0006928
Pfam:PF07195 FliD_C > GO:cell adhesion ; GO:0007155
Pfam:PF07195 FliD_C > GO:bacterial-type flagellum ; GO:0009288
Pfam:PF07196 Flagellin_IN > GO:cellular component movement ; GO:0006928
Pfam:PF07196 Flagellin_IN > GO:bacterial-type flagellum organization ; GO:0044781
Pfam:PF07196 Flagellin_IN > GO:bacterial-type flagellum ; GO:0009288
Pfam:PF07201 HrpJ > GO:pathogenesis ; GO:0009405
Pfam:PF07201 HrpJ > GO:secretion ; GO:0046903
Pfam:PF07201 HrpJ > GO:outer membrane ; GO:0019867
Pfam:PF07212 Hyaluronidase_1 > GO:hyalurononglucosaminidase activity ; GO:0004415
Pfam:PF07212 Hyaluronidase_1 > GO:capsule polysaccharide biosynthetic process ; GO:0045227
Pfam:PF07221 GlcNAc_2-epim > GO:isomerase activity ; GO:0016853
Pfam:PF07224 Chlorophyllase > GO:chlorophyllase activity ; GO:0047746
Pfam:PF07224 Chlorophyllase > GO:chlorophyll catabolic process ; GO:0015996
Pfam:PF07225 NDUF_B4 > GO:NADH dehydrogenase (ubiquinone) activity ; GO:0008137
Pfam:PF07225 NDUF_B4 > GO:mitochondrion ; GO:0005739
Pfam:PF07228 SpoIIE > GO:catalytic activity ; GO:0003824
Pfam:PF07229 VirE2 > GO:DNA binding ; GO:0003677
Pfam:PF07236 Phytoreo_S7 > GO:virion ; GO:0019012
Pfam:PF07238 PilZ > GO:cyclic-di-GMP binding ; GO:0035438
Pfam:PF07243 Phlebovirus_G1 > GO:integral component of membrane ; GO:0016021
Pfam:PF07243 Phlebovirus_G1 > GO:virion ; GO:0019012
Pfam:PF07244 Surf_Ag_VNR > GO:outer membrane ; GO:0019867
Pfam:PF07247 AATase > GO:alcohol O-acetyltransferase activity ; GO:0004026
Pfam:PF07247 AATase > GO:alcohol metabolic process ; GO:0006066
Pfam:PF07260 ANKH > GO:phosphate ion transmembrane transporter activity ; GO:0015114
Pfam:PF07260 ANKH > GO:phosphate ion transmembrane transport ; GO:0035435
Pfam:PF07260 ANKH > GO:integral component of membrane ; GO:0016021
Pfam:PF07263 DMP1 > GO:ossification ; GO:0001503
Pfam:PF07263 DMP1 > GO:extracellular matrix organization ; GO:0030198
Pfam:PF07267 Nucleo_P87 > GO:viral capsid ; GO:0019028
Pfam:PF07271 Cytadhesin_P30 > GO:heterophilic cell-cell adhesion ; GO:0007157
Pfam:PF07271 Cytadhesin_P30 > GO:pathogenesis ; GO:0009405
Pfam:PF07271 Cytadhesin_P30 > GO:integral component of membrane ; GO:0016021
Pfam:PF07284 BCHF > GO:hydro-lyase activity ; GO:0016836
Pfam:PF07284 BCHF > GO:photosynthesis, dark reaction ; GO:0019685
Pfam:PF07284 BCHF > GO:bacteriochlorophyll biosynthetic process ; GO:0030494
Pfam:PF07291 MauE > GO:methylamine metabolic process ; GO:0030416
Pfam:PF07291 MauE > GO:integral component of membrane ; GO:0016021
Pfam:PF07294 Fibroin_P25 > GO:structural molecule activity ; GO:0005198
Pfam:PF07294 Fibroin_P25 > GO:extracellular region ; GO:0005576
Pfam:PF07297 DPM2 > GO:macromolecule biosynthetic process ; GO:0009059
Pfam:PF07297 DPM2 > GO:integral component of endoplasmic reticulum membrane ; GO:0030176
Pfam:PF07307 HEPPP_synt_1 > GO:menaquinone biosynthetic process ; GO:0009234
Pfam:PF07328 VirD1 > GO:endonuclease activity ; GO:0004519
Pfam:PF07340 Herpes_IE1 > GO:regulation of viral process ; GO:0050792
Pfam:PF07340 Herpes_IE1 > GO:host cell nucleus ; GO:0042025
Pfam:PF07347 CI-B14_5a > GO:NADH dehydrogenase (ubiquinone) activity ; GO:0008137
Pfam:PF07347 CI-B14_5a > GO:ATP synthesis coupled electron transport ; GO:0042773
Pfam:PF07347 CI-B14_5a > GO:mitochondrial inner membrane ; GO:0005743
Pfam:PF07348 Syd > GO:cytoplasmic side of plasma membrane ; GO:0009898
Pfam:PF07352 Phage_Mu_Gam > GO:double-stranded DNA binding ; GO:0003690
Pfam:PF07352 Phage_Mu_Gam > GO:DNA protection ; GO:0042262
Pfam:PF07353 Uroplakin_II > GO:membrane organization ; GO:0061024
Pfam:PF07353 Uroplakin_II > GO:integral component of endoplasmic reticulum membrane ; GO:0030176
Pfam:PF07354 Sp38 > GO:binding of sperm to zona pellucida ; GO:0007339
Pfam:PF07354 Sp38 > GO:extracellular region ; GO:0005576
Pfam:PF07355 GRDB > GO:glycine reductase activity ; GO:0030699
Pfam:PF07355 GRDB > GO:oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor ; GO:0050485
Pfam:PF07355 GRDB > GO:oxidation-reduction process ; GO:0055114
Pfam:PF07355 GRDB > GO:glycine reductase complex ; GO:0030700
Pfam:PF07359 LEAP-2 > GO:defense response to bacterium ; GO:0042742
Pfam:PF07361 Cytochrom_B562 > GO:iron ion binding ; GO:0005506
Pfam:PF07361 Cytochrom_B562 > GO:electron carrier activity ; GO:0009055
Pfam:PF07361 Cytochrom_B562 > GO:heme binding ; GO:0020037
Pfam:PF07361 Cytochrom_B562 > GO:electron transport chain ; GO:0022900
Pfam:PF07361 Cytochrom_B562 > GO:periplasmic space ; GO:0042597
Pfam:PF07365 Toxin_8 > GO:acetylcholine receptor inhibitor activity ; GO:0030550
Pfam:PF07365 Toxin_8 > GO:pathogenesis ; GO:0009405
Pfam:PF07365 Toxin_8 > GO:extracellular region ; GO:0005576
Pfam:PF07378 FlbT > GO:mRNA 5'-UTR binding ; GO:0048027
Pfam:PF07378 FlbT > GO:mRNA catabolic process ; GO:0006402
Pfam:PF07378 FlbT > GO:negative regulation of bacterial-type flagellum assembly ; GO:1902209
Pfam:PF07382 HC2 > GO:DNA binding ; GO:0003677
Pfam:PF07382 HC2 > GO:chromosome condensation ; GO:0030261
Pfam:PF07393 Sec10 > GO:exocytosis ; GO:0006887
Pfam:PF07393 Sec10 > GO:vesicle docking ; GO:0048278
Pfam:PF07393 Sec10 > GO:cytoplasm ; GO:0005737
Pfam:PF07402 Herpes_U26 > GO:integral component of membrane ; GO:0016021
Pfam:PF07404 TEBP_beta > GO:telomeric DNA binding ; GO:0042162
Pfam:PF07404 TEBP_beta > GO:chromosome, telomeric region ; GO:0000781
Pfam:PF07412 Geminin > GO:regulation of DNA replication ; GO:0006275
Pfam:PF07415 Herpes_LMP2 > GO:viral latency ; GO:0019042
Pfam:PF07415 Herpes_LMP2 > GO:host cell membrane ; GO:0033644
Pfam:PF07417 Crl > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF07417 Crl > GO:cytoplasm ; GO:0005737
Pfam:PF07421 Pro-NT_NN > GO:neuropeptide hormone activity ; GO:0005184
Pfam:PF07421 Pro-NT_NN > GO:extracellular region ; GO:0005576
Pfam:PF07425 Pardaxin > GO:extracellular region ; GO:0005576
Pfam:PF07429 Glyco_transf_56 > GO:fucosyltransferase activity ; GO:0008417
Pfam:PF07429 Glyco_transf_56 > GO:enterobacterial common antigen biosynthetic process ; GO:0009246
Pfam:PF07429 Glyco_transf_56 > GO:Gram-negative-bacterium-type cell wall ; GO:0009276
Pfam:PF07432 Hc1 > GO:DNA binding ; GO:0003677
Pfam:PF07440 Caerin_1 > GO:extracellular region ; GO:0005576
Pfam:PF07442 Ponericin > GO:extracellular region ; GO:0005576
Pfam:PF07443 HARP > GO:helicase activity ; GO:0004386
Pfam:PF07443 HARP > GO:chromatin modification ; GO:0016568
Pfam:PF07443 HARP > GO:nucleus ; GO:0005634
Pfam:PF07448 Spp-24 > GO:bone remodeling ; GO:0046849
Pfam:PF07448 Spp-24 > GO:extracellular region ; GO:0005576
Pfam:PF07460 NUMOD3 > GO:DNA binding ; GO:0003677
Pfam:PF07462 MSP1_C > GO:pathogenesis ; GO:0009405
Pfam:PF07462 MSP1_C > GO:membrane ; GO:0016020
Pfam:PF07463 NUMOD4 > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF07464 ApoLp-III > GO:lipid binding ; GO:0008289
Pfam:PF07464 ApoLp-III > GO:lipid transport ; GO:0006869
Pfam:PF07464 ApoLp-III > GO:extracellular region ; GO:0005576
Pfam:PF07465 PsaM > GO:photosynthesis ; GO:0015979
Pfam:PF07469 DUF1518 > GO:nucleus ; GO:0005634
Pfam:PF07473 Toxin_11 > GO:pathogenesis ; GO:0009405
Pfam:PF07473 Toxin_11 > GO:extracellular region ; GO:0005576
Pfam:PF07475 Hpr_kinase_C > GO:phosphorelay sensor kinase activity ; GO:0000155
Pfam:PF07475 Hpr_kinase_C > GO:protein kinase activity ; GO:0004672
Pfam:PF07475 Hpr_kinase_C > GO:ATP binding ; GO:0005524
Pfam:PF07475 Hpr_kinase_C > GO:phosphorelay signal transduction system ; GO:0000160
Pfam:PF07475 Hpr_kinase_C > GO:regulation of carbohydrate metabolic process ; GO:0006109
Pfam:PF07477 Glyco_hydro_67C > GO:alpha-glucuronidase activity ; GO:0046559
Pfam:PF07477 Glyco_hydro_67C > GO:xylan catabolic process ; GO:0045493
Pfam:PF07477 Glyco_hydro_67C > GO:extracellular region ; GO:0005576
Pfam:PF07478 Dala_Dala_lig_C > GO:D-alanine-D-alanine ligase activity ; GO:0008716
Pfam:PF07479 NAD_Gly3P_dh_C > GO:glycerol-3-phosphate dehydrogenase [NAD+] activity ; GO:0004367
Pfam:PF07479 NAD_Gly3P_dh_C > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF07479 NAD_Gly3P_dh_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF07486 Hydrolase_2 > GO:hydrolase activity ; GO:0016787
Pfam:PF07487 SopE_GEF > GO:guanyl-nucleotide exchange factor activity ; GO:0005085
Pfam:PF07487 SopE_GEF > GO:pathogenesis ; GO:0009405
Pfam:PF07487 SopE_GEF > GO:actin cytoskeleton reorganization ; GO:0031532
Pfam:PF07487 SopE_GEF > GO:activation of Rho GTPase activity ; GO:0032862
Pfam:PF07488 Glyco_hydro_67M > GO:alpha-glucuronidase activity ; GO:0046559
Pfam:PF07488 Glyco_hydro_67M > GO:xylan catabolic process ; GO:0045493
Pfam:PF07488 Glyco_hydro_67M > GO:extracellular region ; GO:0005576
Pfam:PF07492 Trehalase_Ca-bi > GO:alpha,alpha-trehalase activity ; GO:0004555
Pfam:PF07492 Trehalase_Ca-bi > GO:calcium ion binding ; GO:0005509
Pfam:PF07492 Trehalase_Ca-bi > GO:trehalose catabolic process ; GO:0005993
Pfam:PF07492 Trehalase_Ca-bi > GO:cytoplasm ; GO:0005737
Pfam:PF07496 zf-CW > GO:zinc ion binding ; GO:0008270
Pfam:PF07497 Rho_RNA_bind > GO:RNA binding ; GO:0003723
Pfam:PF07497 Rho_RNA_bind > GO:DNA-templated transcription, termination ; GO:0006353
Pfam:PF07498 Rho_N > GO:DNA-templated transcription, termination ; GO:0006353
Pfam:PF07499 RuvA_C > GO:ATP binding ; GO:0005524
Pfam:PF07499 RuvA_C > GO:four-way junction helicase activity ; GO:0009378
Pfam:PF07499 RuvA_C > GO:DNA repair ; GO:0006281
Pfam:PF07499 RuvA_C > GO:DNA recombination ; GO:0006310
Pfam:PF07499 RuvA_C > GO:Holliday junction helicase complex ; GO:0009379
Pfam:PF07500 TFIIS_M > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF07503 zf-HYPF > GO:zinc ion binding ; GO:0008270
Pfam:PF07516 SecA_SW > GO:protein import ; GO:0017038
Pfam:PF07516 SecA_SW > GO:membrane ; GO:0016020
Pfam:PF07517 SecA_DEAD > GO:ATP binding ; GO:0005524
Pfam:PF07517 SecA_DEAD > GO:protein import ; GO:0017038
Pfam:PF07517 SecA_DEAD > GO:membrane ; GO:0016020
Pfam:PF07525 SOCS_box > GO:intracellular signal transduction ; GO:0035556
Pfam:PF07527 Hairy_orange > GO:DNA binding ; GO:0003677
Pfam:PF07527 Hairy_orange > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF07531 TAFH > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF07531 TAFH > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF07533 BRK > GO:protein binding ; GO:0005515
Pfam:PF07533 BRK > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF07535 zf-DBF > GO:nucleic acid binding ; GO:0003676
Pfam:PF07535 zf-DBF > GO:zinc ion binding ; GO:0008270
Pfam:PF07536 HWE_HK > GO:protein histidine kinase activity ; GO:0004673
Pfam:PF07541 EIF_2_alpha > GO:RNA binding ; GO:0003723
Pfam:PF07541 EIF_2_alpha > GO:translation initiation factor activity ; GO:0003743
Pfam:PF07541 EIF_2_alpha > GO:eukaryotic translation initiation factor 2 complex ; GO:0005850
Pfam:PF07542 ATP12 > GO:proton-transporting ATP synthase complex assembly ; GO:0043461
Pfam:PF07544 Med9 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF07544 Med9 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF07544 Med9 > GO:mediator complex ; GO:0016592
Pfam:PF07545 Vg_Tdu > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF07545 Vg_Tdu > GO:nucleus ; GO:0005634
Pfam:PF07546 EMI > GO:protein binding ; GO:0005515
Pfam:PF07548 ChlamPMP_M > GO:outer membrane ; GO:0019867
Pfam:PF07552 Coat_X > GO:sporulation resulting in formation of a cellular spore ; GO:0030435
Pfam:PF07552 Coat_X > GO:spore wall ; GO:0031160
Pfam:PF07557 Shugoshin_C > GO:meiotic chromosome segregation ; GO:0045132
Pfam:PF07557 Shugoshin_C > GO:chromosome, centromeric region ; GO:0000775
Pfam:PF07557 Shugoshin_C > GO:nucleus ; GO:0005634
Pfam:PF07559 FlaE > GO:bacterial-type flagellum basal body, rod ; GO:0030694
Pfam:PF07562 NCD3G > GO:G-protein coupled receptor activity ; GO:0004930
Pfam:PF07562 NCD3G > GO:G-protein coupled receptor signaling pathway ; GO:0007186
Pfam:PF07565 Band_3_cyto > GO:anion transmembrane transporter activity ; GO:0008509
Pfam:PF07565 Band_3_cyto > GO:anion transport ; GO:0006820
Pfam:PF07565 Band_3_cyto > GO:integral component of membrane ; GO:0016021
Pfam:PF07569 Hira > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF07569 Hira > GO:nucleus ; GO:0005634
Pfam:PF07571 DUF1546 > GO:regulation of sequence-specific DNA binding transcription factor activity ; GO:0051090
Pfam:PF07571 DUF1546 > GO:nucleus ; GO:0005634
Pfam:PF07573 AreA_N > GO:DNA binding ; GO:0003677
Pfam:PF07573 AreA_N > GO:zinc ion binding ; GO:0008270
Pfam:PF07573 AreA_N > GO:nitrate assimilation ; GO:0042128
Pfam:PF07573 AreA_N > GO:nucleus ; GO:0005634
Pfam:PF07574 SMC_Nse1 > GO:DNA repair ; GO:0006281
Pfam:PF07574 SMC_Nse1 > GO:Smc5-Smc6 complex ; GO:0030915
Pfam:PF07578 LAB_N > GO:lipid-A-disaccharide synthase activity ; GO:0008915
Pfam:PF07578 LAB_N > GO:lipid A biosynthetic process ; GO:0009245
Pfam:PF07580 Peptidase_M26_C > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF07580 Peptidase_M26_C > GO:zinc ion binding ; GO:0008270
Pfam:PF07580 Peptidase_M26_C > GO:extracellular region ; GO:0005576
Pfam:PF07580 Peptidase_M26_C > GO:cell wall ; GO:0005618
Pfam:PF07645 EGF_CA > GO:calcium ion binding ; GO:0005509
Pfam:PF07646 Kelch_2 > GO:protein binding ; GO:0005515
Pfam:PF07647 SAM_2 > GO:protein binding ; GO:0005515
Pfam:PF07648 Kazal_2 > GO:protein binding ; GO:0005515
Pfam:PF07649 C1_3 > GO:protein-disulfide reductase activity ; GO:0047134
Pfam:PF07649 C1_3 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF07650 KH_2 > GO:RNA binding ; GO:0003723
Pfam:PF07651 ANTH > GO:phospholipid binding ; GO:0005543
Pfam:PF07652 Flavi_DEAD > GO:ATP binding ; GO:0005524
Pfam:PF07652 Flavi_DEAD > GO:ATP-dependent helicase activity ; GO:0008026
Pfam:PF07652 Flavi_DEAD > GO:viral genome replication ; GO:0019079
Pfam:PF07655 Secretin_N_2 > GO:pilus assembly ; GO:0009297
Pfam:PF07655 Secretin_N_2 > GO:outer membrane ; GO:0019867
Pfam:PF07657 MNNL > GO:Notch signaling pathway ; GO:0007219
Pfam:PF07657 MNNL > GO:multicellular organismal development ; GO:0007275
Pfam:PF07657 MNNL > GO:integral component of membrane ; GO:0016021
Pfam:PF07660 STN > GO:outer membrane ; GO:0019867
Pfam:PF07663 EIIBC-GUT_C > GO:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity ; GO:0008982
Pfam:PF07663 EIIBC-GUT_C > GO:phosphoenolpyruvate-dependent sugar phosphotransferase system ; GO:0009401
Pfam:PF07663 EIIBC-GUT_C > GO:integral component of membrane ; GO:0016021
Pfam:PF07664 FeoB_C > GO:ferrous iron transmembrane transporter activity ; GO:0015093
Pfam:PF07664 FeoB_C > GO:ferrous iron transport ; GO:0015684
Pfam:PF07664 FeoB_C > GO:integral component of membrane ; GO:0016021
Pfam:PF07668 MpPF1 > GO:membrane ; GO:0016020
Pfam:PF07669 Eco57I > GO:DNA binding ; GO:0003677
Pfam:PF07669 Eco57I > GO:catalytic activity ; GO:0003824
Pfam:PF07669 Eco57I > GO:DNA modification ; GO:0006304
Pfam:PF07670 Gate > GO:nucleoside binding ; GO:0001882
Pfam:PF07677 A2M_recep > GO:extracellular region ; GO:0005576
Pfam:PF07678 A2M_comp > GO:extracellular space ; GO:0005615
Pfam:PF07684 NODP > GO:Notch signaling pathway ; GO:0007219
Pfam:PF07684 NODP > GO:multicellular organismal development ; GO:0007275
Pfam:PF07684 NODP > GO:cell differentiation ; GO:0030154
Pfam:PF07684 NODP > GO:integral component of membrane ; GO:0016021
Pfam:PF07685 GATase_3 > GO:catalytic activity ; GO:0003824
Pfam:PF07685 GATase_3 > GO:cobalamin biosynthetic process ; GO:0009236
Pfam:PF07688 KaiA > GO:protein phosphorylation ; GO:0006468
Pfam:PF07688 KaiA > GO:circadian rhythm ; GO:0007623
Pfam:PF07689 KaiB > GO:rhythmic process ; GO:0048511
Pfam:PF07690 MFS_1 > GO:transmembrane transport ; GO:0055085
Pfam:PF07690 MFS_1 > GO:integral component of membrane ; GO:0016021
Pfam:PF07694 5TM-5TMR_LYT > GO:phosphorelay sensor kinase activity ; GO:0000155
Pfam:PF07694 5TM-5TMR_LYT > GO:protein histidine kinase activity ; GO:0004673
Pfam:PF07694 5TM-5TMR_LYT > GO:phosphorelay signal transduction system ; GO:0000160
Pfam:PF07694 5TM-5TMR_LYT > GO:cell wall organization ; GO:0071555
Pfam:PF07694 5TM-5TMR_LYT > GO:integral component of membrane ; GO:0016021
Pfam:PF07700 HNOB > GO:heme binding ; GO:0020037
Pfam:PF07701 HNOBA > GO:guanylate cyclase activity ; GO:0004383
Pfam:PF07701 HNOBA > GO:cGMP biosynthetic process ; GO:0006182
Pfam:PF07702 UTRA > GO:DNA binding ; GO:0003677
Pfam:PF07702 UTRA > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF07706 TAT_ubiq > GO:L-tyrosine:2-oxoglutarate aminotransferase activity ; GO:0004838
Pfam:PF07706 TAT_ubiq > GO:pyridoxal phosphate binding ; GO:0030170
Pfam:PF07706 TAT_ubiq > GO:aromatic amino acid family catabolic process ; GO:0009074
Pfam:PF07710 P53_tetramer > GO:protein tetramerization ; GO:0051262
Pfam:PF07711 RabGGT_insert > GO:Rab geranylgeranyltransferase activity ; GO:0004663
Pfam:PF07711 RabGGT_insert > GO:zinc ion binding ; GO:0008270
Pfam:PF07714 Pkinase_Tyr > GO:protein kinase activity ; GO:0004672
Pfam:PF07714 Pkinase_Tyr > GO:protein phosphorylation ; GO:0006468
Pfam:PF07715 Plug > GO:receptor activity ; GO:0004872
Pfam:PF07715 Plug > GO:transporter activity ; GO:0005215
Pfam:PF07715 Plug > GO:transport ; GO:0006810
Pfam:PF07715 Plug > GO:membrane ; GO:0016020
Pfam:PF07716 bZIP_2 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF07716 bZIP_2 > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF07716 bZIP_2 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF07718 Coatamer_beta_C > GO:structural molecule activity ; GO:0005198
Pfam:PF07718 Coatamer_beta_C > GO:intracellular protein transport ; GO:0006886
Pfam:PF07718 Coatamer_beta_C > GO:vesicle-mediated transport ; GO:0016192
Pfam:PF07718 Coatamer_beta_C > GO:COPI vesicle coat ; GO:0030126
Pfam:PF07721 TPR_4 > GO:identical protein binding ; GO:0042802
Pfam:PF07722 Peptidase_C26 > GO:hydrolase activity ; GO:0016787
Pfam:PF07722 Peptidase_C26 > GO:glutamine metabolic process ; GO:0006541
Pfam:PF07724 AAA_2 > GO:ATP binding ; GO:0005524
Pfam:PF07726 AAA_3 > GO:ATP binding ; GO:0005524
Pfam:PF07726 AAA_3 > GO:ATPase activity ; GO:0016887
Pfam:PF07728 AAA_5 > GO:ATP binding ; GO:0005524
Pfam:PF07728 AAA_5 > GO:ATPase activity ; GO:0016887
Pfam:PF07730 HisKA_3 > GO:phosphorelay sensor kinase activity ; GO:0000155
Pfam:PF07730 HisKA_3 > GO:protein dimerization activity ; GO:0046983
Pfam:PF07730 HisKA_3 > GO:phosphorelay signal transduction system ; GO:0000160
Pfam:PF07730 HisKA_3 > GO:integral component of membrane ; GO:0016021
Pfam:PF07731 Cu-oxidase_2 > GO:copper ion binding ; GO:0005507
Pfam:PF07731 Cu-oxidase_2 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF07731 Cu-oxidase_2 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF07732 Cu-oxidase_3 > GO:copper ion binding ; GO:0005507
Pfam:PF07733 DNA_pol3_alpha > GO:3'-5' exonuclease activity ; GO:0008408
Pfam:PF07733 DNA_pol3_alpha > GO:DNA replication ; GO:0006260
Pfam:PF07740 Toxin_12 > GO:ion channel inhibitor activity ; GO:0008200
Pfam:PF07740 Toxin_12 > GO:pathogenesis ; GO:0009405
Pfam:PF07740 Toxin_12 > GO:extracellular region ; GO:0005576
Pfam:PF07743 HSCB_C > GO:protein oligomerization ; GO:0051259
Pfam:PF07745 Glyco_hydro_53 > GO:glucosidase activity ; GO:0015926
Pfam:PF07748 Glyco_hydro_38C > GO:mannosidase activity ; GO:0015923
Pfam:PF07748 Glyco_hydro_38C > GO:mannose metabolic process ; GO:0006013
Pfam:PF07749 ERp29 > GO:endoplasmic reticulum ; GO:0005783
Pfam:PF07757 AdoMet_MTase > GO:methyltransferase activity ; GO:0008168
Pfam:PF07776 zf-AD > GO:zinc ion binding ; GO:0008270
Pfam:PF07776 zf-AD > GO:nucleus ; GO:0005634
Pfam:PF07777 MFMR > GO:DNA binding ; GO:0003677
Pfam:PF07777 MFMR > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF07777 MFMR > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF07777 MFMR > GO:nucleus ; GO:0005634
Pfam:PF07778 CENP-I > GO:centromere complex assembly ; GO:0034508
Pfam:PF07778 CENP-I > GO:kinetochore ; GO:0000776
Pfam:PF07780 Spb1_C > GO:methyltransferase activity ; GO:0008168
Pfam:PF07780 Spb1_C > GO:rRNA processing ; GO:0006364
Pfam:PF07780 Spb1_C > GO:nucleus ; GO:0005634
Pfam:PF07781 Reovirus_Mu2 > GO:structural molecule activity ; GO:0005198
Pfam:PF07781 Reovirus_Mu2 > GO:viral capsid ; GO:0019028
Pfam:PF07782 DC_STAMP > GO:integral component of membrane ; GO:0016021
Pfam:PF07808 RED_N > GO:nucleus ; GO:0005634
Pfam:PF07809 RTP801_C > GO:negative regulation of signal transduction ; GO:0009968
Pfam:PF07809 RTP801_C > GO:cytoplasm ; GO:0005737
Pfam:PF07810 TMC > GO:integral component of membrane ; GO:0016021
Pfam:PF07813 LTXXQ > GO:periplasmic space ; GO:0042597
Pfam:PF07815 Abi_HHR > GO:cytoplasm ; GO:0005737
Pfam:PF07817 GLE1 > GO:poly(A)+ mRNA export from nucleus ; GO:0016973
Pfam:PF07817 GLE1 > GO:nuclear pore ; GO:0005643
Pfam:PF07818 HCNGP > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF07819 PGAP1 > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF07819 PGAP1 > GO:GPI anchor metabolic process ; GO:0006505
Pfam:PF07819 PGAP1 > GO:intracellular protein transport ; GO:0006886
Pfam:PF07820 TraC > GO:conjugation ; GO:0000746
Pfam:PF07821 Alpha-amyl_C2 > GO:alpha-amylase activity ; GO:0004556
Pfam:PF07821 Alpha-amyl_C2 > GO:calcium ion binding ; GO:0005509
Pfam:PF07821 Alpha-amyl_C2 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF07822 Toxin_13 > GO:sodium channel inhibitor activity ; GO:0019871
Pfam:PF07822 Toxin_13 > GO:pathogenesis ; GO:0009405
Pfam:PF07822 Toxin_13 > GO:extracellular region ; GO:0005576
Pfam:PF07823 CPDase > GO:cyclic-nucleotide phosphodiesterase activity ; GO:0004112
Pfam:PF07825 Exc > GO:DNA binding ; GO:0003677
Pfam:PF07825 Exc > GO:DNA recombination ; GO:0006310
Pfam:PF07826 IMP_cyclohyd > GO:IMP cyclohydrolase activity ; GO:0003937
Pfam:PF07826 IMP_cyclohyd > GO:purine nucleotide biosynthetic process ; GO:0006164
Pfam:PF07826 IMP_cyclohyd > GO:IMP biosynthetic process ; GO:0006188
Pfam:PF07827 KNTase_C > GO:nucleotidyltransferase activity ; GO:0016779
Pfam:PF07827 KNTase_C > GO:response to antibiotic ; GO:0046677
Pfam:PF07829 Toxin_14 > GO:acetylcholine receptor inhibitor activity ; GO:0030550
Pfam:PF07829 Toxin_14 > GO:pathogenesis ; GO:0009405
Pfam:PF07829 Toxin_14 > GO:extracellular region ; GO:0005576
Pfam:PF07830 PP2C_C > GO:magnesium ion binding ; GO:0000287
Pfam:PF07830 PP2C_C > GO:phosphoprotein phosphatase activity ; GO:0004721
Pfam:PF07830 PP2C_C > GO:manganese ion binding ; GO:0030145
Pfam:PF07831 PYNP_C > GO:transferase activity, transferring pentosyl groups ; GO:0016763
Pfam:PF07831 PYNP_C > GO:pyrimidine nucleoside metabolic process ; GO:0006213
Pfam:PF07834 RanGAP1_C > GO:Ran GTPase activator activity ; GO:0005098
Pfam:PF07834 RanGAP1_C > GO:signal transduction ; GO:0007165
Pfam:PF07836 DmpG_comm > GO:oxo-acid-lyase activity ; GO:0016833
Pfam:PF07836 DmpG_comm > GO:aromatic compound catabolic process ; GO:0019439
Pfam:PF07837 FTCD_N > GO:folic acid binding ; GO:0005542
Pfam:PF07837 FTCD_N > GO:transferase activity ; GO:0016740
Pfam:PF07837 FTCD_N > GO:metabolic process ; GO:0008152
Pfam:PF07839 CaM_binding > GO:calmodulin binding ; GO:0005516
Pfam:PF07840 FadR_C > GO:fatty-acyl-CoA binding ; GO:0000062
Pfam:PF07840 FadR_C > GO:regulation of fatty acid metabolic process ; GO:0019217
Pfam:PF07842 GCFC > GO:DNA binding ; GO:0003677
Pfam:PF07842 GCFC > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF07842 GCFC > GO:nucleus ; GO:0005634
Pfam:PF07846 Metallothio_Cad > GO:cadmium ion binding ; GO:0046870
Pfam:PF07847 DUF1637 > GO:cysteamine dioxygenase activity ; GO:0047800
Pfam:PF07847 DUF1637 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF07850 Renin_r > GO:receptor activity ; GO:0004872
Pfam:PF07850 Renin_r > GO:integral component of membrane ; GO:0016021
Pfam:PF07851 TMPIT > GO:integral component of membrane ; GO:0016021
Pfam:PF07859 Abhydrolase_3 > GO:hydrolase activity ; GO:0016787
Pfam:PF07859 Abhydrolase_3 > GO:metabolic process ; GO:0008152
Pfam:PF07880 T4_gp9_10 > GO:viral life cycle ; GO:0019058
Pfam:PF07881 Fucose_iso_N1 > GO:L-fucose isomerase activity ; GO:0008736
Pfam:PF07881 Fucose_iso_N1 > GO:fucose metabolic process ; GO:0006004
Pfam:PF07881 Fucose_iso_N1 > GO:cytoplasm ; GO:0005737
Pfam:PF07882 Fucose_iso_N2 > GO:L-fucose isomerase activity ; GO:0008736
Pfam:PF07882 Fucose_iso_N2 > GO:fucose metabolic process ; GO:0006004
Pfam:PF07882 Fucose_iso_N2 > GO:cytoplasm ; GO:0005737
Pfam:PF07886 BA14K > GO:pathogenesis ; GO:0009405
Pfam:PF07904 Eaf7 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF07904 Eaf7 > GO:nucleus ; GO:0005634
Pfam:PF07904 Eaf7 > GO:H4/H2A histone acetyltransferase complex ; GO:0043189
Pfam:PF07908 D-aminoacyl_C > GO:zinc ion binding ; GO:0008270
Pfam:PF07908 D-aminoacyl_C > GO:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides ; GO:0016811
Pfam:PF07912 ERp29_N > GO:protein secretion ; GO:0009306
Pfam:PF07912 ERp29_N > GO:endoplasmic reticulum lumen ; GO:0005788
Pfam:PF07925 RdRP_5 > GO:RNA binding ; GO:0003723
Pfam:PF07925 RdRP_5 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF07925 RdRP_5 > GO:RNA biosynthetic process ; GO:0032774
Pfam:PF07925 RdRP_5 > GO:viral nucleocapsid ; GO:0019013
Pfam:PF07926 TPR_MLP1_2 > GO:protein import into nucleus ; GO:0006606
Pfam:PF07926 TPR_MLP1_2 > GO:nuclear pore ; GO:0005643
Pfam:PF07927 YcfA > GO:mRNA binding ; GO:0003729
Pfam:PF07928 Vps54 > GO:retrograde transport, endosome to Golgi ; GO:0042147
Pfam:PF07930 DAP_B > GO:aminopeptidase activity ; GO:0004177
Pfam:PF07931 CPT > GO:ATP binding ; GO:0005524
Pfam:PF07931 CPT > GO:transferase activity ; GO:0016740
Pfam:PF07932 DAP_C > GO:aminopeptidase activity ; GO:0004177
Pfam:PF07933 DUF1681 > GO:endocytosis ; GO:0006897
Pfam:PF07933 DUF1681 > GO:membrane ; GO:0016020
Pfam:PF07934 OGG_N > GO:damaged DNA binding ; GO:0003684
Pfam:PF07934 OGG_N > GO:oxidized purine nucleobase lesion DNA N-glycosylase activity ; GO:0008534
Pfam:PF07934 OGG_N > GO:nucleotide-excision repair ; GO:0006289
Pfam:PF07936 Defensin_4 > GO:ion channel inhibitor activity ; GO:0008200
Pfam:PF07936 Defensin_4 > GO:pathogenesis ; GO:0009405
Pfam:PF07936 Defensin_4 > GO:nematocyst ; GO:0042151
Pfam:PF07941 K_channel_TID > GO:voltage-gated potassium channel activity ; GO:0005249
Pfam:PF07941 K_channel_TID > GO:potassium ion binding ; GO:0030955
Pfam:PF07941 K_channel_TID > GO:potassium ion transport ; GO:0006813
Pfam:PF07941 K_channel_TID > GO:integral component of membrane ; GO:0016021
Pfam:PF07943 PBP5_C > GO:serine-type D-Ala-D-Ala carboxypeptidase activity ; GO:0009002
Pfam:PF07943 PBP5_C > GO:proteolysis ; GO:0006508
Pfam:PF07945 Toxin_16 > GO:pathogenesis ; GO:0009405
Pfam:PF07945 Toxin_16 > GO:extracellular region ; GO:0005576
Pfam:PF07947 YhhN > GO:integral component of membrane ; GO:0016021
Pfam:PF07952 Toxin_trans > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF07952 Toxin_trans > GO:zinc ion binding ; GO:0008270
Pfam:PF07952 Toxin_trans > GO:pathogenesis ; GO:0009405
Pfam:PF07952 Toxin_trans > GO:extracellular region ; GO:0005576
Pfam:PF07953 Toxin_R_bind_N > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF07953 Toxin_R_bind_N > GO:toxin receptor binding ; GO:0050827
Pfam:PF07953 Toxin_R_bind_N > GO:pathogenesis ; GO:0009405
Pfam:PF07953 Toxin_R_bind_N > GO:inhibition of neurotransmitter uptake ; GO:0051609
Pfam:PF07953 Toxin_R_bind_N > GO:extracellular region ; GO:0005576
Pfam:PF07955 DUF1687 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF07955 DUF1687 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF07955 DUF1687 > GO:mitochondrion ; GO:0005739
Pfam:PF07959 Fucokinase > GO:transferase activity, transferring phosphorus-containing groups ; GO:0016772
Pfam:PF07962 Swi3 > GO:cellular response to DNA damage stimulus ; GO:0006974
Pfam:PF07962 Swi3 > GO:cell cycle ; GO:0007049
Pfam:PF07962 Swi3 > GO:replication fork protection ; GO:0048478
Pfam:PF07962 Swi3 > GO:nucleus ; GO:0005634
Pfam:PF07964 Red1 > GO:chromosome segregation ; GO:0007059
Pfam:PF07964 Red1 > GO:reciprocal meiotic recombination ; GO:0007131
Pfam:PF07966 A1_Propeptide > GO:aspartic-type endopeptidase activity ; GO:0004190
Pfam:PF07966 A1_Propeptide > GO:proteolysis ; GO:0006508
Pfam:PF07967 zf-C3HC > GO:zinc ion binding ; GO:0008270
Pfam:PF07967 zf-C3HC > GO:nucleus ; GO:0005634
Pfam:PF07968 Leukocidin > GO:cytolysis in other organism ; GO:0051715
Pfam:PF07968 Leukocidin > GO:extracellular region ; GO:0005576
Pfam:PF07973 tRNA_SAD > GO:ATP binding ; GO:0005524
Pfam:PF07973 tRNA_SAD > GO:ligase activity, forming aminoacyl-tRNA and related compounds ; GO:0016876
Pfam:PF07973 tRNA_SAD > GO:tRNA aminoacylation ; GO:0043039
Pfam:PF07975 C1_4 > GO:zinc ion binding ; GO:0008270
Pfam:PF07975 C1_4 > GO:DNA repair ; GO:0006281
Pfam:PF07988 LMSTEN > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF07991 IlvN > GO:ketol-acid reductoisomerase activity ; GO:0004455
Pfam:PF07991 IlvN > GO:cellular amino acid biosynthetic process ; GO:0008652
Pfam:PF07991 IlvN > GO:oxidation-reduction process ; GO:0055114
Pfam:PF07992 Pyr_redox_2 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF07992 Pyr_redox_2 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF07994 NAD_binding_5 > GO:inositol-3-phosphate synthase activity ; GO:0004512
Pfam:PF07994 NAD_binding_5 > GO:inositol biosynthetic process ; GO:0006021
Pfam:PF07994 NAD_binding_5 > GO:phospholipid biosynthetic process ; GO:0008654
Pfam:PF07995 GSDH > GO:oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor ; GO:0016901
Pfam:PF07995 GSDH > GO:quinone binding ; GO:0048038
Pfam:PF07995 GSDH > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF07998 Peptidase_M54 > GO:zinc ion binding ; GO:0008270
Pfam:PF08001 CMV_US > GO:evasion or tolerance by virus of host immune response ; GO:0030683
Pfam:PF08001 CMV_US > GO:integral to host endoplasmic reticulum membrane ; GO:0044386
Pfam:PF08013 Tagatose_6_P_K > GO:galactitol metabolic process ; GO:0019402
Pfam:PF08015 Pheromone > GO:mating pheromone activity ; GO:0000772
Pfam:PF08015 Pheromone > GO:membrane ; GO:0016020
Pfam:PF08018 Antimicrobial_1 > GO:extracellular region ; GO:0005576
Pfam:PF08019 DUF1705 > GO:integral component of membrane ; GO:0016021
Pfam:PF08022 FAD_binding_8 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF08022 FAD_binding_8 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF08023 Antimicrobial_2 > GO:extracellular region ; GO:0005576
Pfam:PF08024 Antimicrobial_4 > GO:hemolysis by symbiont of host erythrocytes ; GO:0019836
Pfam:PF08024 Antimicrobial_4 > GO:extracellular region ; GO:0005576
Pfam:PF08025 Antimicrobial_3 > GO:hemolysis by symbiont of host erythrocytes ; GO:0019836
Pfam:PF08025 Antimicrobial_3 > GO:extracellular region ; GO:0005576
Pfam:PF08026 Antimicrobial_5 > GO:hemolymph coagulation ; GO:0042381
Pfam:PF08026 Antimicrobial_5 > GO:extracellular region ; GO:0005576
Pfam:PF08027 Albumin_I > GO:nutrient reservoir activity ; GO:0045735
Pfam:PF08027 Albumin_I > GO:pathogenesis ; GO:0009405
Pfam:PF08029 HisG_C > GO:magnesium ion binding ; GO:0000287
Pfam:PF08029 HisG_C > GO:ATP phosphoribosyltransferase activity ; GO:0003879
Pfam:PF08029 HisG_C > GO:histidine biosynthetic process ; GO:0000105
Pfam:PF08029 HisG_C > GO:cytoplasm ; GO:0005737
Pfam:PF08030 NAD_binding_6 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF08030 NAD_binding_6 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF08031 BBE > GO:oxidoreductase activity ; GO:0016491
Pfam:PF08031 BBE > GO:flavin adenine dinucleotide binding ; GO:0050660
Pfam:PF08031 BBE > GO:oxidation-reduction process ; GO:0055114
Pfam:PF08032 SpoU_sub_bind > GO:methyltransferase activity ; GO:0008168
Pfam:PF08036 Antimicrobial_6 > GO:defense response to fungus ; GO:0050832
Pfam:PF08036 Antimicrobial_6 > GO:extracellular region ; GO:0005576
Pfam:PF08037 Attractin > GO:mating pheromone activity ; GO:0000772
Pfam:PF08037 Attractin > GO:sexual reproduction ; GO:0019953
Pfam:PF08037 Attractin > GO:extracellular region ; GO:0005576
Pfam:PF08038 Tom7 > GO:protein import into mitochondrial matrix ; GO:0030150
Pfam:PF08038 Tom7 > GO:mitochondrial outer membrane translocase complex ; GO:0005742
Pfam:PF08039 Mit_proteolip > GO:mitochondrion ; GO:0005739
Pfam:PF08040 NADH_oxidored > GO:NADH dehydrogenase activity ; GO:0003954
Pfam:PF08040 NADH_oxidored > GO:mitochondrion ; GO:0005739
Pfam:PF08041 PetM > GO:cytochrome b6f complex ; GO:0009512
Pfam:PF08042 PqqA > GO:pyrroloquinoline quinone biosynthetic process ; GO:0018189
Pfam:PF08043 Xin > GO:actin binding ; GO:0003779
Pfam:PF08043 Xin > GO:actin cytoskeleton organization ; GO:0030036
Pfam:PF08043 Xin > GO:cell junction ; GO:0030054
Pfam:PF08046 IlvGEDA_leader > GO:branched-chain amino acid biosynthetic process ; GO:0009082
Pfam:PF08047 His_leader > GO:histidine biosynthetic process ; GO:0000105
Pfam:PF08050 Tet_res_leader > GO:response to antibiotic ; GO:0046677
Pfam:PF08052 PyrBI_leader > GO:pyrimidine nucleobase biosynthetic process ; GO:0019856
Pfam:PF08053 Tna_leader > GO:regulation of DNA-templated transcription, termination ; GO:0031554
Pfam:PF08053 Tna_leader > GO:transcriptional attenuation by ribosome ; GO:0031556
Pfam:PF08054 Leu_leader > GO:leucine biosynthetic process ; GO:0009098
Pfam:PF08057 Ery_res_leader2 > GO:response to antibiotic ; GO:0046677
Pfam:PF08061 P68HR > GO:transcription cofactor activity ; GO:0003712
Pfam:PF08061 P68HR > GO:RNA helicase activity ; GO:0003724
Pfam:PF08061 P68HR > GO:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides ; GO:0016818
Pfam:PF08061 P68HR > GO:nucleus ; GO:0005634
Pfam:PF08063 PADR1 > GO:NAD+ ADP-ribosyltransferase activity ; GO:0003950
Pfam:PF08063 PADR1 > GO:nucleus ; GO:0005634
Pfam:PF08064 UME > GO:protein serine/threonine kinase activity ; GO:0004674
Pfam:PF08066 PMC2NT > GO:RNA processing ; GO:0006396
Pfam:PF08066 PMC2NT > GO:nuclear exosome (RNase complex) ; GO:0000176
Pfam:PF08069 Ribosomal_S13_N > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF08069 Ribosomal_S13_N > GO:translation ; GO:0006412
Pfam:PF08069 Ribosomal_S13_N > GO:ribosome ; GO:0005840
Pfam:PF08070 DTHCT > GO:DNA binding ; GO:0003677
Pfam:PF08070 DTHCT > GO:DNA topoisomerase type II (ATP-hydrolyzing) activity ; GO:0003918
Pfam:PF08070 DTHCT > GO:ATP binding ; GO:0005524
Pfam:PF08070 DTHCT > GO:nucleus ; GO:0005634
Pfam:PF08072 BDHCT > GO:DNA binding ; GO:0003677
Pfam:PF08072 BDHCT > GO:ATP binding ; GO:0005524
Pfam:PF08072 BDHCT > GO:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides ; GO:0016818
Pfam:PF08072 BDHCT > GO:DNA replication ; GO:0006260
Pfam:PF08072 BDHCT > GO:nucleus ; GO:0005634
Pfam:PF08073 CHDNT > GO:DNA binding ; GO:0003677
Pfam:PF08073 CHDNT > GO:ATP binding ; GO:0005524
Pfam:PF08073 CHDNT > GO:zinc ion binding ; GO:0008270
Pfam:PF08073 CHDNT > GO:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides ; GO:0016818
Pfam:PF08073 CHDNT > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF08073 CHDNT > GO:nucleus ; GO:0005634
Pfam:PF08074 CHDCT2 > GO:DNA binding ; GO:0003677
Pfam:PF08074 CHDCT2 > GO:ATP binding ; GO:0005524
Pfam:PF08074 CHDCT2 > GO:zinc ion binding ; GO:0008270
Pfam:PF08074 CHDCT2 > GO:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides ; GO:0016818
Pfam:PF08074 CHDCT2 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF08074 CHDCT2 > GO:nucleus ; GO:0005634
Pfam:PF08082 PRO8NT > GO:mRNA splicing, via spliceosome ; GO:0000398
Pfam:PF08083 PROCN > GO:mRNA splicing, via spliceosome ; GO:0000398
Pfam:PF08085 Entericidin > GO:response to toxic substance ; GO:0009636
Pfam:PF08085 Entericidin > GO:membrane ; GO:0016020
Pfam:PF08086 Toxin_17 > GO:potassium channel inhibitor activity ; GO:0019870
Pfam:PF08086 Toxin_17 > GO:pathogenesis ; GO:0009405
Pfam:PF08086 Toxin_17 > GO:extracellular region ; GO:0005576
Pfam:PF08088 Toxin_19 > GO:pathogenesis ; GO:0009405
Pfam:PF08088 Toxin_19 > GO:extracellular region ; GO:0005576
Pfam:PF08089 Toxin_20 > GO:extracellular region ; GO:0005576
Pfam:PF08091 Toxin_21 > GO:pathogenesis ; GO:0009405
Pfam:PF08091 Toxin_21 > GO:extracellular region ; GO:0005576
Pfam:PF08092 Toxin_22 > GO:sodium channel inhibitor activity ; GO:0019871
Pfam:PF08092 Toxin_22 > GO:extracellular region ; GO:0005576
Pfam:PF08093 Toxin_23 > GO:sodium channel inhibitor activity ; GO:0019871
Pfam:PF08093 Toxin_23 > GO:pathogenesis ; GO:0009405
Pfam:PF08093 Toxin_23 > GO:extracellular region ; GO:0005576
Pfam:PF08094 Toxin_24 > GO:sodium channel inhibitor activity ; GO:0019871
Pfam:PF08094 Toxin_24 > GO:pathogenesis ; GO:0009405
Pfam:PF08094 Toxin_24 > GO:extracellular region ; GO:0005576
Pfam:PF08095 Toxin_25 > GO:pathogenesis ; GO:0009405
Pfam:PF08095 Toxin_25 > GO:extracellular region ; GO:0005576
Pfam:PF08096 Bombolitin > GO:pathogenesis ; GO:0009405
Pfam:PF08096 Bombolitin > GO:mast cell degranulation ; GO:0043303
Pfam:PF08096 Bombolitin > GO:extracellular region ; GO:0005576
Pfam:PF08097 Toxin_26 > GO:extracellular region ; GO:0005576
Pfam:PF08098 ATX_III > GO:sodium channel inhibitor activity ; GO:0019871
Pfam:PF08098 ATX_III > GO:pathogenesis ; GO:0009405
Pfam:PF08098 ATX_III > GO:nematocyst ; GO:0042151
Pfam:PF08099 Toxin_27 > GO:calcium channel inhibitor activity ; GO:0019855
Pfam:PF08099 Toxin_27 > GO:pathogenesis ; GO:0009405
Pfam:PF08099 Toxin_27 > GO:extracellular region ; GO:0005576
Pfam:PF08100 Dimerisation > GO:protein dimerization activity ; GO:0046983
Pfam:PF08102 Antimicrobial_7 > GO:extracellular region ; GO:0005576
Pfam:PF08103 Antimicrobial_8 > GO:extracellular region ; GO:0005576
Pfam:PF08104 Antimicrobial_9 > GO:innate immune response ; GO:0045087
Pfam:PF08104 Antimicrobial_9 > GO:extracellular region ; GO:0005576
Pfam:PF08106 Antimicrobial11 > GO:hemolymph coagulation ; GO:0042381
Pfam:PF08106 Antimicrobial11 > GO:defense response to bacterium ; GO:0042742
Pfam:PF08107 Antimicrobial12 > GO:defense response to bacterium ; GO:0042742
Pfam:PF08108 Antimicrobial13 > GO:defense response to bacterium ; GO:0042742
Pfam:PF08110 Antimicrobial15 > GO:hemolysis by symbiont of host erythrocytes ; GO:0019836
Pfam:PF08110 Antimicrobial15 > GO:extracellular region ; GO:0005576
Pfam:PF08111 Pea-VEAacid > GO:neuropeptide hormone activity ; GO:0005184
Pfam:PF08111 Pea-VEAacid > GO:neuropeptide signaling pathway ; GO:0007218
Pfam:PF08111 Pea-VEAacid > GO:extracellular region ; GO:0005576
Pfam:PF08112 ATP-synt_E_2 > GO:ATPase activity, coupled to transmembrane movement of substances ; GO:0042626
Pfam:PF08112 ATP-synt_E_2 > GO:ATP synthesis coupled proton transport ; GO:0015986
Pfam:PF08112 ATP-synt_E_2 > GO:proton-transporting two-sector ATPase complex, catalytic domain ; GO:0033178
Pfam:PF08115 Toxin_28 > GO:pathogenesis ; GO:0009405
Pfam:PF08115 Toxin_28 > GO:extracellular region ; GO:0005576
Pfam:PF08116 Toxin_29 > GO:pathogenesis ; GO:0009405
Pfam:PF08116 Toxin_29 > GO:extracellular region ; GO:0005576
Pfam:PF08117 Toxin_30 > GO:calcium channel inhibitor activity ; GO:0019855
Pfam:PF08117 Toxin_30 > GO:pathogenesis ; GO:0009405
Pfam:PF08117 Toxin_30 > GO:extracellular region ; GO:0005576
Pfam:PF08118 MDM31_MDM32 > GO:mitochondrion organization ; GO:0007005
Pfam:PF08118 MDM31_MDM32 > GO:mitochondrial inner membrane ; GO:0005743
Pfam:PF08119 Toxin_31 > GO:potassium channel inhibitor activity ; GO:0019870
Pfam:PF08119 Toxin_31 > GO:pathogenesis ; GO:0009405
Pfam:PF08119 Toxin_31 > GO:extracellular region ; GO:0005576
Pfam:PF08120 Toxin_32 > GO:potassium channel inhibitor activity ; GO:0019870
Pfam:PF08120 Toxin_32 > GO:pathogenesis ; GO:0009405
Pfam:PF08120 Toxin_32 > GO:extracellular region ; GO:0005576
Pfam:PF08121 Toxin_33 > GO:acetylcholine receptor inhibitor activity ; GO:0030550
Pfam:PF08121 Toxin_33 > GO:extracellular region ; GO:0005576
Pfam:PF08122 NDUF_B12 > GO:electron transport chain ; GO:0022900
Pfam:PF08122 NDUF_B12 > GO:mitochondrion ; GO:0005739
Pfam:PF08122 NDUF_B12 > GO:mitochondrial respiratory chain complex I ; GO:0005747
Pfam:PF08123 DOT1 > GO:histone-lysine N-methyltransferase activity ; GO:0018024
Pfam:PF08125 Mannitol_dh_C > GO:oxidoreductase activity ; GO:0016491
Pfam:PF08125 Mannitol_dh_C > GO:coenzyme binding ; GO:0050662
Pfam:PF08125 Mannitol_dh_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF08126 Propeptide_C25 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF08127 Propeptide_C1 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF08127 Propeptide_C1 > GO:regulation of catalytic activity ; GO:0050790
Pfam:PF08131 Defensin_3 > GO:extracellular region ; GO:0005576
Pfam:PF08133 Nuclease_act > GO:nuclease activity ; GO:0004518
Pfam:PF08133 Nuclease_act > GO:regulation of viral process ; GO:0050792
Pfam:PF08136 Ribosomal_S22 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF08136 Ribosomal_S22 > GO:translation ; GO:0006412
Pfam:PF08136 Ribosomal_S22 > GO:ribosome ; GO:0005840
Pfam:PF08138 Sex_peptide > GO:hormone activity ; GO:0005179
Pfam:PF08138 Sex_peptide > GO:regulation of female receptivity, post-mating ; GO:0046008
Pfam:PF08138 Sex_peptide > GO:extracellular region ; GO:0005576
Pfam:PF08140 Cuticle_1 > GO:structural constituent of cuticle ; GO:0042302
Pfam:PF08141 SspH > GO:asexual sporulation ; GO:0030436
Pfam:PF08141 SspH > GO:endospore-forming forespore ; GO:0042601
Pfam:PF08142 AARP2CN > GO:ribosome biogenesis ; GO:0042254
Pfam:PF08142 AARP2CN > GO:nucleus ; GO:0005634
Pfam:PF08144 CPL > GO:RNA binding ; GO:0003723
Pfam:PF08145 BOP1NT > GO:rRNA processing ; GO:0006364
Pfam:PF08147 DBP10CT > GO:RNA binding ; GO:0003723
Pfam:PF08147 DBP10CT > GO:ATP binding ; GO:0005524
Pfam:PF08147 DBP10CT > GO:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides ; GO:0016818
Pfam:PF08147 DBP10CT > GO:nucleus ; GO:0005634
Pfam:PF08148 DSHCT > GO:ATP binding ; GO:0005524
Pfam:PF08148 DSHCT > GO:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides ; GO:0016818
Pfam:PF08150 FerB > GO:integral component of membrane ; GO:0016021
Pfam:PF08152 GUCT > GO:RNA binding ; GO:0003723
Pfam:PF08152 GUCT > GO:helicase activity ; GO:0004386
Pfam:PF08152 GUCT > GO:ATP binding ; GO:0005524
Pfam:PF08152 GUCT > GO:nucleus ; GO:0005634
Pfam:PF08157 NUC129 > GO:nucleus ; GO:0005634
Pfam:PF08159 NUC153 > GO:nucleus ; GO:0005634
Pfam:PF08163 NUC194 > GO:DNA binding ; GO:0003677
Pfam:PF08163 NUC194 > GO:DNA-dependent protein kinase activity ; GO:0004677
Pfam:PF08163 NUC194 > GO:ATP binding ; GO:0005524
Pfam:PF08163 NUC194 > GO:double-strand break repair via nonhomologous end joining ; GO:0006303
Pfam:PF08163 NUC194 > GO:nucleus ; GO:0005634
Pfam:PF08164 TRAUB > GO:nucleus ; GO:0005634
Pfam:PF08165 FerA > GO:integral component of membrane ; GO:0016021
Pfam:PF08168 NUC205 > GO:nucleus ; GO:0005634
Pfam:PF08170 POPLD > GO:ribonuclease P activity ; GO:0004526
Pfam:PF08170 POPLD > GO:RNA processing ; GO:0006396
Pfam:PF08171 Mad3_BUB1_II > GO:cell cycle checkpoint ; GO:0000075
Pfam:PF08171 Mad3_BUB1_II > GO:nucleus ; GO:0005634
Pfam:PF08172 CASP_C > GO:intra-Golgi vesicle-mediated transport ; GO:0006891
Pfam:PF08172 CASP_C > GO:integral component of Golgi membrane ; GO:0030173
Pfam:PF08176 SspK > GO:asexual sporulation ; GO:0030436
Pfam:PF08176 SspK > GO:endospore-forming forespore ; GO:0042601
Pfam:PF08177 SspN > GO:asexual sporulation ; GO:0030436
Pfam:PF08177 SspN > GO:endospore-forming forespore ; GO:0042601
Pfam:PF08179 SspP > GO:sporulation resulting in formation of a cellular spore ; GO:0030435
Pfam:PF08184 Cuticle_2 > GO:structural constituent of cuticle ; GO:0042302
Pfam:PF08187 Tetradecapep > GO:neuropeptide hormone activity ; GO:0005184
Pfam:PF08187 Tetradecapep > GO:neuropeptide signaling pathway ; GO:0007218
Pfam:PF08187 Tetradecapep > GO:extracellular region ; GO:0005576
Pfam:PF08188 Protamine_3 > GO:DNA binding ; GO:0003677
Pfam:PF08188 Protamine_3 > GO:sperm chromatin condensation ; GO:0035092
Pfam:PF08188 Protamine_3 > GO:nuclear chromosome ; GO:0000228
Pfam:PF08198 Thymopoietin > GO:DNA binding ; GO:0003677
Pfam:PF08202 MIS13 > GO:chromosome segregation ; GO:0007059
Pfam:PF08202 MIS13 > GO:cell division ; GO:0051301
Pfam:PF08202 MIS13 > GO:MIS12/MIND type complex ; GO:0000444
Pfam:PF08210 APOBEC_N > GO:zinc ion binding ; GO:0008270
Pfam:PF08210 APOBEC_N > GO:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines ; GO:0016814
Pfam:PF08211 dCMP_cyt_deam_2 > GO:cytidine deaminase activity ; GO:0004126
Pfam:PF08211 dCMP_cyt_deam_2 > GO:zinc ion binding ; GO:0008270
Pfam:PF08211 dCMP_cyt_deam_2 > GO:cytidine deamination ; GO:0009972
Pfam:PF08218 Citrate_ly_lig > GO:[citrate (pro-3S)-lyase] ligase activity ; GO:0008771
Pfam:PF08219 TOM13 > GO:mitochondrial outer membrane ; GO:0005741
Pfam:PF08220 HTH_DeoR > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF08220 HTH_DeoR > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF08220 HTH_DeoR > GO:intracellular ; GO:0005622
Pfam:PF08225 Antimicrobial19 > GO:defense response ; GO:0006952
Pfam:PF08236 SRI > GO:histone-lysine N-methyltransferase activity ; GO:0018024
Pfam:PF08236 SRI > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF08236 SRI > GO:histone lysine methylation ; GO:0034968
Pfam:PF08236 SRI > GO:chromosome ; GO:0005694
Pfam:PF08240 ADH_N > GO:oxidoreductase activity ; GO:0016491
Pfam:PF08240 ADH_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF08241 Methyltransf_11 > GO:methyltransferase activity ; GO:0008168
Pfam:PF08241 Methyltransf_11 > GO:metabolic process ; GO:0008152
Pfam:PF08245 Mur_ligase_M > GO:ATP binding ; GO:0005524
Pfam:PF08245 Mur_ligase_M > GO:biosynthetic process ; GO:0009058
Pfam:PF08254 Leader_Thr > GO:threonine biosynthetic process ; GO:0009088
Pfam:PF08254 Leader_Thr > GO:regulation of DNA-templated transcription, termination ; GO:0031554
Pfam:PF08254 Leader_Thr > GO:transcriptional attenuation by ribosome ; GO:0031556
Pfam:PF08256 Antimicrobial20 > GO:defense response ; GO:0006952
Pfam:PF08264 Anticodon_1 > GO:nucleotide binding ; GO:0000166
Pfam:PF08264 Anticodon_1 > GO:tRNA aminoacylation for protein translation ; GO:0006418
Pfam:PF08267 Meth_synt_1 > GO:5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity ; GO:0003871
Pfam:PF08267 Meth_synt_1 > GO:zinc ion binding ; GO:0008270
Pfam:PF08267 Meth_synt_1 > GO:cellular amino acid biosynthetic process ; GO:0008652
Pfam:PF08272 Topo_Zn_Ribbon > GO:DNA binding ; GO:0003677
Pfam:PF08272 Topo_Zn_Ribbon > GO:DNA topoisomerase type II (ATP-hydrolyzing) activity ; GO:0003918
Pfam:PF08272 Topo_Zn_Ribbon > GO:DNA topological change ; GO:0006265
Pfam:PF08272 Topo_Zn_Ribbon > GO:chromosome ; GO:0005694
Pfam:PF08273 Prim_Zn_Ribbon > GO:DNA primase activity ; GO:0003896
Pfam:PF08273 Prim_Zn_Ribbon > GO:helicase activity ; GO:0004386
Pfam:PF08273 Prim_Zn_Ribbon > GO:zinc ion binding ; GO:0008270
Pfam:PF08278 DnaG_DnaB_bind > GO:DNA primase activity ; GO:0003896
Pfam:PF08278 DnaG_DnaB_bind > GO:DNA replication, synthesis of RNA primer ; GO:0006269
Pfam:PF08281 Sigma70_r4_2 > GO:DNA binding ; GO:0003677
Pfam:PF08281 Sigma70_r4_2 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF08281 Sigma70_r4_2 > GO:sigma factor activity ; GO:0016987
Pfam:PF08281 Sigma70_r4_2 > GO:DNA-templated transcription, initiation ; GO:0006352
Pfam:PF08281 Sigma70_r4_2 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF08283 Gemini_AL1_M > GO:endodeoxyribonuclease activity, producing 5'-phosphomonoesters ; GO:0016888
Pfam:PF08287 DASH_Spc19 > GO:attachment of spindle microtubules to kinetochore ; GO:0008608
Pfam:PF08287 DASH_Spc19 > GO:spindle microtubule ; GO:0005876
Pfam:PF08287 DASH_Spc19 > GO:DASH complex ; GO:0042729
Pfam:PF08288 PIGA > GO:GPI anchor biosynthetic process ; GO:0006506
Pfam:PF08289 Flu_M1_C > GO:RNA binding ; GO:0003723
Pfam:PF08289 Flu_M1_C > GO:structural molecule activity ; GO:0005198
Pfam:PF08290 Hep_core_N > GO:structural molecule activity ; GO:0005198
Pfam:PF08290 Hep_core_N > GO:pathogenesis ; GO:0009405
Pfam:PF08294 TIM21 > GO:protein import into mitochondrial matrix ; GO:0030150
Pfam:PF08294 TIM21 > GO:mitochondrial inner membrane presequence translocase complex ; GO:0005744
Pfam:PF08299 Bac_DnaA_C > GO:ATP binding ; GO:0005524
Pfam:PF08299 Bac_DnaA_C > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF08299 Bac_DnaA_C > GO:DNA replication initiation ; GO:0006270
Pfam:PF08299 Bac_DnaA_C > GO:regulation of DNA replication ; GO:0006275
Pfam:PF08300 HCV_NS5a_1a > GO:zinc ion binding ; GO:0008270
Pfam:PF08302 tRNA_lig_CPD > GO:RNA ligase (ATP) activity ; GO:0003972
Pfam:PF08302 tRNA_lig_CPD > GO:ATP binding ; GO:0005524
Pfam:PF08302 tRNA_lig_CPD > GO:tRNA splicing, via endonucleolytic cleavage and ligation ; GO:0006388
Pfam:PF08303 tRNA_lig_kinase > GO:RNA ligase (ATP) activity ; GO:0003972
Pfam:PF08303 tRNA_lig_kinase > GO:ATP binding ; GO:0005524
Pfam:PF08303 tRNA_lig_kinase > GO:tRNA splicing, via endonucleolytic cleavage and ligation ; GO:0006388
Pfam:PF08320 PIG-X > GO:GPI anchor biosynthetic process ; GO:0006506
Pfam:PF08320 PIG-X > GO:endoplasmic reticulum membrane ; GO:0005789
Pfam:PF08326 ACC_central > GO:acetyl-CoA carboxylase activity ; GO:0003989
Pfam:PF08326 ACC_central > GO:ATP binding ; GO:0005524
Pfam:PF08326 ACC_central > GO:fatty acid biosynthetic process ; GO:0006633
Pfam:PF08327 AHSA1 > GO:response to stress ; GO:0006950
Pfam:PF08328 ASL_C > GO:N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity ; GO:0004018
Pfam:PF08328 ASL_C > GO:IMP biosynthetic process ; GO:0006188
Pfam:PF08329 ChitinaseA_N > GO:chitinase activity ; GO:0004568
Pfam:PF08329 ChitinaseA_N > GO:chitin catabolic process ; GO:0006032
Pfam:PF08332 CaMKII_AD > GO:calmodulin-dependent protein kinase activity ; GO:0004683
Pfam:PF08332 CaMKII_AD > GO:calmodulin binding ; GO:0005516
Pfam:PF08332 CaMKII_AD > GO:protein phosphorylation ; GO:0006468
Pfam:PF08335 GlnD_UR_UTase > GO:nucleotidyltransferase activity ; GO:0016779
Pfam:PF08336 P4Ha_N > GO:procollagen-proline 4-dioxygenase activity ; GO:0004656
Pfam:PF08336 P4Ha_N > GO:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen ; GO:0016702
Pfam:PF08336 P4Ha_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF08336 P4Ha_N > GO:endoplasmic reticulum ; GO:0005783
Pfam:PF08352 oligo_HPY > GO:nucleotide binding ; GO:0000166
Pfam:PF08352 oligo_HPY > GO:ATP binding ; GO:0005524
Pfam:PF08352 oligo_HPY > GO:peptide transport ; GO:0015833
Pfam:PF08354 DUF1729 > GO:enoyl-[acyl-carrier-protein] reductase (NADH) activity ; GO:0004318
Pfam:PF08354 DUF1729 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF08360 TetR_C_5 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF08360 TetR_C_5 > GO:negative regulation of transcription, DNA-templated ; GO:0045892
Pfam:PF08361 TetR_C_2 > GO:DNA binding ; GO:0003677
Pfam:PF08362 TetR_C_3 > GO:negative regulation of transcription, DNA-templated ; GO:0045892
Pfam:PF08367 M16C_assoc > GO:proteolysis ; GO:0006508
Pfam:PF08369 PCP_red > GO:oxidoreductase activity ; GO:0016491
Pfam:PF08369 PCP_red > GO:photosynthesis ; GO:0015979
Pfam:PF08369 PCP_red > GO:chlorophyll biosynthetic process ; GO:0015995
Pfam:PF08369 PCP_red > GO:oxidation-reduction process ; GO:0055114
Pfam:PF08375 Rpn3_C > GO:enzyme regulator activity ; GO:0030234
Pfam:PF08375 Rpn3_C > GO:regulation of protein catabolic process ; GO:0042176
Pfam:PF08375 Rpn3_C > GO:proteasome complex ; GO:0000502
Pfam:PF08392 FAE1_CUT1_RppA > GO:transferase activity, transferring acyl groups other than amino-acyl groups ; GO:0016747
Pfam:PF08392 FAE1_CUT1_RppA > GO:fatty acid biosynthetic process ; GO:0006633
Pfam:PF08392 FAE1_CUT1_RppA > GO:membrane ; GO:0016020
Pfam:PF08395 7tm_7 > GO:sensory perception of taste ; GO:0050909
Pfam:PF08395 7tm_7 > GO:integral component of membrane ; GO:0016021
Pfam:PF08397 IMD > GO:cytoskeletal adaptor activity ; GO:0008093
Pfam:PF08397 IMD > GO:SH3 domain binding ; GO:0017124
Pfam:PF08397 IMD > GO:signal transduction ; GO:0007165
Pfam:PF08397 IMD > GO:filopodium assembly ; GO:0046847
Pfam:PF08398 Parvo_coat_N > GO:structural molecule activity ; GO:0005198
Pfam:PF08398 Parvo_coat_N > GO:viral capsid ; GO:0019028
Pfam:PF08402 TOBE_2 > GO:transporter activity ; GO:0005215
Pfam:PF08402 TOBE_2 > GO:ATP binding ; GO:0005524
Pfam:PF08402 TOBE_2 > GO:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances ; GO:0016820
Pfam:PF08402 TOBE_2 > GO:transport ; GO:0006810
Pfam:PF08402 TOBE_2 > GO:ATP-binding cassette (ABC) transporter complex ; GO:0043190
Pfam:PF08405 Calici_PP_N > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF08405 Calici_PP_N > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF08405 Calici_PP_N > GO:nucleoside-triphosphatase activity ; GO:0017111
Pfam:PF08405 Calici_PP_N > GO:interspecies interaction between organisms ; GO:0044419
Pfam:PF08407 Chitin_synth_1N > GO:chitin synthase activity ; GO:0004100
Pfam:PF08408 DNA_pol_B_3 > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF08411 Exonuc_X-T_C > GO:exodeoxyribonuclease I activity ; GO:0008852
Pfam:PF08411 Exonuc_X-T_C > GO:DNA repair ; GO:0006281
Pfam:PF08414 NADPH_Ox > GO:peroxidase activity ; GO:0004601
Pfam:PF08414 NADPH_Ox > GO:oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor ; GO:0050664
Pfam:PF08414 NADPH_Ox > GO:oxidation-reduction process ; GO:0055114
Pfam:PF08416 PTB > GO:protein binding ; GO:0005515
Pfam:PF08417 PaO > GO:chlorophyllide a oxygenase [overall] activity ; GO:0010277
Pfam:PF08417 PaO > GO:oxidation-reduction process ; GO:0055114
Pfam:PF08429 PLU-1 > GO:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors ; GO:0016706
Pfam:PF08429 PLU-1 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF08430 Fork_head_N > GO:transcription factor binding ; GO:0008134
Pfam:PF08430 Fork_head_N > GO:protein domain specific binding ; GO:0019904
Pfam:PF08436 DXP_redisom_C > GO:protein binding ; GO:0005515
Pfam:PF08437 Glyco_transf_8C > GO:lipopolysaccharide 3-alpha-galactosyltransferase activity ; GO:0008918
Pfam:PF08437 Glyco_transf_8C > GO:lipopolysaccharide biosynthetic process ; GO:0009103
Pfam:PF08440 Poty_PP > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF08440 Poty_PP > GO:structural molecule activity ; GO:0005198
Pfam:PF08440 Poty_PP > GO:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides ; GO:0016818
Pfam:PF08440 Poty_PP > GO:RNA-protein covalent cross-linking ; GO:0018144
Pfam:PF08445 FR47 > GO:transferase activity, transferring acyl groups other than amino-acyl groups ; GO:0016747
Pfam:PF08446 PAS_2 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF08447 PAS_3 > GO:protein binding ; GO:0005515
Pfam:PF08449 UAA > GO:transmembrane transport ; GO:0055085
Pfam:PF08451 A_deaminase_N > GO:extracellular space ; GO:0005615
Pfam:PF08452 DNAP_B_exo_N > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF08463 EcoEI_R_C > GO:DNA binding ; GO:0003677
Pfam:PF08463 EcoEI_R_C > GO:catalytic activity ; GO:0003824
Pfam:PF08463 EcoEI_R_C > GO:DNA modification ; GO:0006304
Pfam:PF08465 Herpes_TK_C > GO:thymidine kinase activity ; GO:0004797
Pfam:PF08465 Herpes_TK_C > GO:ATP binding ; GO:0005524
Pfam:PF08467 Luteo_P1-P2 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF08468 MTS_N > GO:rRNA (guanine-N2-)-methyltransferase activity ; GO:0008990
Pfam:PF08468 MTS_N > GO:rRNA processing ; GO:0006364
Pfam:PF08469 NPHI_C > GO:ATP binding ; GO:0005524
Pfam:PF08469 NPHI_C > GO:nucleoside-triphosphatase activity ; GO:0017111
Pfam:PF08469 NPHI_C > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF08471 Ribonuc_red_2_N > GO:ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor ; GO:0004748
Pfam:PF08471 Ribonuc_red_2_N > GO:cobalt ion binding ; GO:0050897
Pfam:PF08471 Ribonuc_red_2_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF08472 S6PP_C > GO:sucrose-phosphate phosphatase activity ; GO:0050307
Pfam:PF08472 S6PP_C > GO:sucrose biosynthetic process ; GO:0005986
Pfam:PF08476 VD10_N > GO:phosphatase activity ; GO:0016791
Pfam:PF08477 Miro > GO:GTP binding ; GO:0005525
Pfam:PF08477 Miro > GO:small GTPase mediated signal transduction ; GO:0007264
Pfam:PF08477 Miro > GO:intracellular ; GO:0005622
Pfam:PF08485 Polysacc_syn_2C > GO:UDP-glucose 4-epimerase activity ; GO:0003978
Pfam:PF08485 Polysacc_syn_2C > GO:lipopolysaccharide biosynthetic process ; GO:0009103
Pfam:PF08488 WAK > GO:protein serine/threonine kinase activity ; GO:0004674
Pfam:PF08488 WAK > GO:integral component of membrane ; GO:0016021
Pfam:PF08490 DUF1744 > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF08490 DUF1744 > GO:zinc ion binding ; GO:0008270
Pfam:PF08490 DUF1744 > GO:DNA replication ; GO:0006260
Pfam:PF08490 DUF1744 > GO:nucleus ; GO:0005634
Pfam:PF08491 SE > GO:squalene monooxygenase activity ; GO:0004506
Pfam:PF08491 SE > GO:flavin adenine dinucleotide binding ; GO:0050660
Pfam:PF08491 SE > GO:oxidation-reduction process ; GO:0055114
Pfam:PF08491 SE > GO:integral component of membrane ; GO:0016021
Pfam:PF08492 SRP72 > GO:7S RNA binding ; GO:0008312
Pfam:PF08492 SRP72 > GO:SRP-dependent cotranslational protein targeting to membrane ; GO:0006614
Pfam:PF08492 SRP72 > GO:signal recognition particle ; GO:0048500
Pfam:PF08493 AflR > GO:DNA binding ; GO:0003677
Pfam:PF08493 AflR > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF08493 AflR > GO:aflatoxin biosynthetic process ; GO:0045122
Pfam:PF08493 AflR > GO:nucleus ; GO:0005634
Pfam:PF08494 DEAD_assoc > GO:ATP binding ; GO:0005524
Pfam:PF08494 DEAD_assoc > GO:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides ; GO:0016818
Pfam:PF08496 Peptidase_S49_N > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF08496 Peptidase_S49_N > GO:plasma membrane ; GO:0005886
Pfam:PF08498 Sterol_MT_C > GO:methyltransferase activity ; GO:0008168
Pfam:PF08498 Sterol_MT_C > GO:steroid biosynthetic process ; GO:0006694
Pfam:PF08499 PDEase_I_N > GO:3',5'-cyclic-nucleotide phosphodiesterase activity ; GO:0004114
Pfam:PF08500 Tombus_P33 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF08501 Shikimate_dh_N > GO:shikimate 3-dehydrogenase (NADP+) activity ; GO:0004764
Pfam:PF08501 Shikimate_dh_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF08502 LeuA_dimer > GO:2-isopropylmalate synthase activity ; GO:0003852
Pfam:PF08502 LeuA_dimer > GO:leucine biosynthetic process ; GO:0009098
Pfam:PF08503 DapH_N > GO:tetrahydrodipicolinate N-acetyltransferase activity ; GO:0047200
Pfam:PF08506 Cse1 > GO:intracellular protein transport ; GO:0006886
Pfam:PF08509 Ad_cyc_g-alpha > GO:magnesium ion binding ; GO:0000287
Pfam:PF08509 Ad_cyc_g-alpha > GO:adenylate cyclase activity ; GO:0004016
Pfam:PF08509 Ad_cyc_g-alpha > GO:cAMP biosynthetic process ; GO:0006171
Pfam:PF08515 TGF_beta_GS > GO:transmembrane receptor protein serine/threonine kinase activity ; GO:0004675
Pfam:PF08515 TGF_beta_GS > GO:ATP binding ; GO:0005524
Pfam:PF08515 TGF_beta_GS > GO:protein phosphorylation ; GO:0006468
Pfam:PF08515 TGF_beta_GS > GO:membrane ; GO:0016020
Pfam:PF08516 ADAM_CR > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF08516 ADAM_CR > GO:proteolysis ; GO:0006508
Pfam:PF08517 AXH > GO:RNA binding ; GO:0003723
Pfam:PF08517 AXH > GO:protein binding ; GO:0005515
Pfam:PF08519 RFC1 > GO:DNA clamp loader activity ; GO:0003689
Pfam:PF08519 RFC1 > GO:ATP binding ; GO:0005524
Pfam:PF08519 RFC1 > GO:DNA replication ; GO:0006260
Pfam:PF08519 RFC1 > GO:DNA replication factor C complex ; GO:0005663
Pfam:PF08526 PAD_N > GO:protein-arginine deiminase activity ; GO:0004668
Pfam:PF08526 PAD_N > GO:calcium ion binding ; GO:0005509
Pfam:PF08526 PAD_N > GO:cytoplasm ; GO:0005737
Pfam:PF08527 PAD_M > GO:protein-arginine deiminase activity ; GO:0004668
Pfam:PF08527 PAD_M > GO:calcium ion binding ; GO:0005509
Pfam:PF08527 PAD_M > GO:protein citrullination ; GO:0018101
Pfam:PF08527 PAD_M > GO:cytoplasm ; GO:0005737
Pfam:PF08529 NusA_N > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF08529 NusA_N > GO:regulation of DNA-templated transcription, termination ; GO:0031554
Pfam:PF08530 PepX_C > GO:dipeptidyl-peptidase activity ; GO:0008239
Pfam:PF08532 Glyco_hydro_42M > GO:beta-galactosidase activity ; GO:0004565
Pfam:PF08532 Glyco_hydro_42M > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF08533 Glyco_hydro_42C > GO:beta-galactosidase activity ; GO:0004565
Pfam:PF08533 Glyco_hydro_42C > GO:galactose metabolic process ; GO:0006012
Pfam:PF08534 Redoxin > GO:oxidoreductase activity ; GO:0016491
Pfam:PF08540 HMG_CoA_synt_C > GO:hydroxymethylglutaryl-CoA synthase activity ; GO:0004421
Pfam:PF08540 HMG_CoA_synt_C > GO:isoprenoid biosynthetic process ; GO:0008299
Pfam:PF08541 ACP_syn_III_C > GO:transferase activity, transferring acyl groups other than amino-acyl groups ; GO:0016747
Pfam:PF08541 ACP_syn_III_C > GO:lipid biosynthetic process ; GO:0008610
Pfam:PF08545 ACP_syn_III > GO:3-oxoacyl-[acyl-carrier-protein] synthase activity ; GO:0004315
Pfam:PF08545 ACP_syn_III > GO:fatty acid biosynthetic process ; GO:0006633
Pfam:PF08546 ApbA_C > GO:oxidoreductase activity ; GO:0016491
Pfam:PF08546 ApbA_C > GO:NADP binding ; GO:0050661
Pfam:PF08546 ApbA_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF08548 Peptidase_M10_C > GO:calcium ion binding ; GO:0005509
Pfam:PF08548 Peptidase_M10_C > GO:extracellular space ; GO:0005615
Pfam:PF08558 TRF > GO:telomeric DNA binding ; GO:0042162
Pfam:PF08558 TRF > GO:protein homodimerization activity ; GO:0042803
Pfam:PF08559 Cut8_C > GO:proteasome localization ; GO:0031144
Pfam:PF08559 Cut8_C > GO:nucleus-associated proteasomal ubiquitin-dependent protein catabolic process ; GO:0071630
Pfam:PF08559 Cut8_C > GO:nucleus ; GO:0005634
Pfam:PF08563 P53_TAD > GO:protein binding ; GO:0005515
Pfam:PF08587 UBA_2 > GO:protein serine/threonine kinase activity ; GO:0004674
Pfam:PF08597 eIF3_subunit > GO:translation initiation factor activity ; GO:0003743
Pfam:PF08597 eIF3_subunit > GO:cytoplasm ; GO:0005737
Pfam:PF08597 eIF3_subunit > GO:eukaryotic translation initiation factor 3 complex ; GO:0005852
Pfam:PF08603 CAP_C > GO:actin binding ; GO:0003779
Pfam:PF08603 CAP_C > GO:cytoskeleton organization ; GO:0007010
Pfam:PF08612 Med20 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF08612 Med20 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF08612 Med20 > GO:mediator complex ; GO:0016592
Pfam:PF08613 Cyclin > GO:protein kinase binding ; GO:0019901
Pfam:PF08613 Cyclin > GO:regulation of cyclin-dependent protein serine/threonine kinase activity ; GO:0000079
Pfam:PF08619 Nha1_C > GO:sodium:proton antiporter activity ; GO:0015385
Pfam:PF08619 Nha1_C > GO:sodium ion transport ; GO:0006814
Pfam:PF08619 Nha1_C > GO:membrane ; GO:0016020
Pfam:PF08622 Svf1 > GO:response to oxidative stress ; GO:0006979
Pfam:PF08625 Utp13 > GO:rRNA processing ; GO:0006364
Pfam:PF08625 Utp13 > GO:small-subunit processome ; GO:0032040
Pfam:PF08633 Rox3 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF08633 Rox3 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF08633 Rox3 > GO:mediator complex ; GO:0016592
Pfam:PF08638 Med14 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF08638 Med14 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF08638 Med14 > GO:mediator complex ; GO:0016592
Pfam:PF08649 DASH_Dad1 > GO:mitotic spindle organization in nucleus ; GO:0030472
Pfam:PF08649 DASH_Dad1 > GO:DASH complex ; GO:0042729
Pfam:PF08649 DASH_Dad1 > GO:mitotic spindle ; GO:0072686
Pfam:PF08650 DASH_Dad4 > GO:attachment of spindle microtubules to kinetochore ; GO:0008608
Pfam:PF08650 DASH_Dad4 > GO:DASH complex ; GO:0042729
Pfam:PF08650 DASH_Dad4 > GO:mitotic spindle ; GO:0072686
Pfam:PF08651 DASH_Duo1 > GO:mitotic nuclear division ; GO:0007067
Pfam:PF08651 DASH_Duo1 > GO:DASH complex ; GO:0042729
Pfam:PF08651 DASH_Duo1 > GO:mitotic spindle ; GO:0072686
Pfam:PF08653 DASH_Dam1 > GO:attachment of spindle microtubules to kinetochore ; GO:0008608
Pfam:PF08653 DASH_Dam1 > GO:DASH complex ; GO:0042729
Pfam:PF08653 DASH_Dam1 > GO:mitotic spindle ; GO:0072686
Pfam:PF08654 DASH_Dad2 > GO:mitotic nuclear division ; GO:0007067
Pfam:PF08654 DASH_Dad2 > GO:DASH complex ; GO:0042729
Pfam:PF08654 DASH_Dad2 > GO:mitotic spindle ; GO:0072686
Pfam:PF08655 DASH_Ask1 > GO:attachment of spindle microtubules to kinetochore ; GO:0008608
Pfam:PF08655 DASH_Ask1 > GO:DASH complex ; GO:0042729
Pfam:PF08655 DASH_Ask1 > GO:mitotic spindle ; GO:0072686
Pfam:PF08656 DASH_Dad3 > GO:attachment of spindle microtubules to kinetochore ; GO:0008608
Pfam:PF08656 DASH_Dad3 > GO:DASH complex ; GO:0042729
Pfam:PF08656 DASH_Dad3 > GO:mitotic spindle ; GO:0072686
Pfam:PF08657 DASH_Spc34 > GO:attachment of spindle microtubules to kinetochore ; GO:0008608
Pfam:PF08657 DASH_Spc34 > GO:spindle microtubule ; GO:0005876
Pfam:PF08657 DASH_Spc34 > GO:DASH complex ; GO:0042729
Pfam:PF08658 Rad54_N > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF08661 Rep_fac-A_3 > GO:DNA binding ; GO:0003677
Pfam:PF08661 Rep_fac-A_3 > GO:DNA replication ; GO:0006260
Pfam:PF08661 Rep_fac-A_3 > GO:DNA repair ; GO:0006281
Pfam:PF08661 Rep_fac-A_3 > GO:DNA recombination ; GO:0006310
Pfam:PF08661 Rep_fac-A_3 > GO:nucleus ; GO:0005634
Pfam:PF08671 SinI > GO:protein dimerization activity ; GO:0046983
Pfam:PF08671 SinI > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF08675 RNA_bind > GO:RNA binding ; GO:0003723
Pfam:PF08675 RNA_bind > GO:poly(A)-specific ribonuclease activity ; GO:0004535
Pfam:PF08675 RNA_bind > GO:metal ion binding ; GO:0046872
Pfam:PF08675 RNA_bind > GO:mRNA catabolic process ; GO:0006402
Pfam:PF08675 RNA_bind > GO:nucleus ; GO:0005634
Pfam:PF08675 RNA_bind > GO:cytoplasm ; GO:0005737
Pfam:PF08676 MutL_C > GO:ATP binding ; GO:0005524
Pfam:PF08676 MutL_C > GO:mismatch repair ; GO:0006298
Pfam:PF08683 CAMSAP_CKK > GO:microtubule binding ; GO:0008017
Pfam:PF08685 GON > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF08685 GON > GO:zinc ion binding ; GO:0008270
Pfam:PF08686 PLAC > GO:peptidase activity ; GO:0008233
Pfam:PF08687 ASD2 > GO:cell morphogenesis ; GO:0000902
Pfam:PF08687 ASD2 > GO:cytoplasm ; GO:0005737
Pfam:PF08689 Med5 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF08689 Med5 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF08689 Med5 > GO:mediator complex ; GO:0016592
Pfam:PF08702 Fib_alpha > GO:receptor binding ; GO:0005102
Pfam:PF08702 Fib_alpha > GO:protein binding, bridging ; GO:0030674
Pfam:PF08702 Fib_alpha > GO:signal transduction ; GO:0007165
Pfam:PF08702 Fib_alpha > GO:platelet activation ; GO:0030168
Pfam:PF08702 Fib_alpha > GO:protein polymerization ; GO:0051258
Pfam:PF08702 Fib_alpha > GO:fibrinogen complex ; GO:0005577
Pfam:PF08703 PLC-beta_C > GO:phosphatidylinositol phospholipase C activity ; GO:0004435
Pfam:PF08703 PLC-beta_C > GO:calcium ion binding ; GO:0005509
Pfam:PF08703 PLC-beta_C > GO:lipid catabolic process ; GO:0016042
Pfam:PF08704 GCD14 > GO:tRNA (adenine-N1-)-methyltransferase activity ; GO:0016429
Pfam:PF08704 GCD14 > GO:tRNA methylation ; GO:0030488
Pfam:PF08704 GCD14 > GO:tRNA (m1A) methyltransferase complex ; GO:0031515
Pfam:PF08707 PriCT_2 > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF08710 nsp9 > GO:RNA binding ; GO:0003723
Pfam:PF08710 nsp9 > GO:viral genome replication ; GO:0019079
Pfam:PF08711 Med26 > GO:DNA binding ; GO:0003677
Pfam:PF08711 Med26 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF08711 Med26 > GO:nucleus ; GO:0005634
Pfam:PF08714 Fae > GO:carbon-nitrogen lyase activity ; GO:0016840
Pfam:PF08714 Fae > GO:carbohydrate biosynthetic process ; GO:0016051
Pfam:PF08715 Viral_protease > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF08715 Viral_protease > GO:omega peptidase activity ; GO:0008242
Pfam:PF08715 Viral_protease > GO:transferase activity ; GO:0016740
Pfam:PF08716 nsp7 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF08716 nsp7 > GO:omega peptidase activity ; GO:0008242
Pfam:PF08716 nsp7 > GO:transferase activity ; GO:0016740
Pfam:PF08717 nsp8 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF08717 nsp8 > GO:omega peptidase activity ; GO:0008242
Pfam:PF08717 nsp8 > GO:transferase activity ; GO:0016740
Pfam:PF08718 GLTP > GO:glycolipid transporter activity ; GO:0017089
Pfam:PF08718 GLTP > GO:glycolipid binding ; GO:0051861
Pfam:PF08718 GLTP > GO:glycolipid transport ; GO:0046836
Pfam:PF08718 GLTP > GO:cytoplasm ; GO:0005737
Pfam:PF08720 Hema_stalk > GO:host cell surface receptor binding ; GO:0046789
Pfam:PF08720 Hema_stalk > GO:fusion of virus membrane with host plasma membrane ; GO:0019064
Pfam:PF08720 Hema_stalk > GO:viral envelope ; GO:0019031
Pfam:PF08727 P3A > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF08727 P3A > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF08727 P3A > GO:nucleoside-triphosphatase activity ; GO:0017111
Pfam:PF08752 COP-gamma_platf > GO:structural molecule activity ; GO:0005198
Pfam:PF08752 COP-gamma_platf > GO:intracellular protein transport ; GO:0006886
Pfam:PF08752 COP-gamma_platf > GO:vesicle-mediated transport ; GO:0016192
Pfam:PF08752 COP-gamma_platf > GO:COPI vesicle coat ; GO:0030126
Pfam:PF08755 YccV-like > GO:DNA binding ; GO:0003677
Pfam:PF08769 Spo0A_C > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF08769 Spo0A_C > GO:calcium ion binding ; GO:0005509
Pfam:PF08769 Spo0A_C > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF08769 Spo0A_C > GO:regulation of sporulation resulting in formation of a cellular spore ; GO:0042173
Pfam:PF08769 Spo0A_C > GO:cytoplasm ; GO:0005737
Pfam:PF08771 Rapamycin_bind > GO:drug binding ; GO:0008144
Pfam:PF08774 VRR_NUC > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF08782 c-SKI_SMAD_bind > GO:SMAD binding ; GO:0046332
Pfam:PF08783 DWNN > GO:zinc ion binding ; GO:0008270
Pfam:PF08783 DWNN > GO:nucleus ; GO:0005634
Pfam:PF08785 Ku_PK_bind > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF08797 HIRAN > GO:nucleic acid binding ; GO:0003676
Pfam:PF08797 HIRAN > GO:zinc ion binding ; GO:0008270
Pfam:PF08797 HIRAN > GO:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides ; GO:0016818
Pfam:PF08802 CytB6-F_Fe-S > GO:plastoquinol--plastocyanin reductase activity ; GO:0009496
Pfam:PF08802 CytB6-F_Fe-S > GO:2 iron, 2 sulfur cluster binding ; GO:0051537
Pfam:PF08802 CytB6-F_Fe-S > GO:oxidation-reduction process ; GO:0055114
Pfam:PF08802 CytB6-F_Fe-S > GO:thylakoid membrane ; GO:0042651
Pfam:PF08804 gp32 > GO:single-stranded DNA binding ; GO:0003697
Pfam:PF08815 Nuc_rec_co-act > GO:transcription coactivator activity ; GO:0003713
Pfam:PF08815 Nuc_rec_co-act > GO:nuclear hormone receptor binding ; GO:0035257
Pfam:PF08815 Nuc_rec_co-act > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF08815 Nuc_rec_co-act > GO:nucleus ; GO:0005634
Pfam:PF08825 E2_bind > GO:ATP binding ; GO:0005524
Pfam:PF08825 E2_bind > GO:acid-amino acid ligase activity ; GO:0016881
Pfam:PF08825 E2_bind > GO:protein neddylation ; GO:0045116
Pfam:PF08826 DMPK_coil > GO:protein serine/threonine kinase activity ; GO:0004674
Pfam:PF08826 DMPK_coil > GO:ATP binding ; GO:0005524
Pfam:PF08826 DMPK_coil > GO:protein phosphorylation ; GO:0006468
Pfam:PF08831 MHCassoc_trimer > GO:MHC class II protein binding ; GO:0042289
Pfam:PF08831 MHCassoc_trimer > GO:intracellular protein transport ; GO:0006886
Pfam:PF08831 MHCassoc_trimer > GO:immune response ; GO:0006955
Pfam:PF08831 MHCassoc_trimer > GO:antigen processing and presentation ; GO:0019882
Pfam:PF08831 MHCassoc_trimer > GO:membrane ; GO:0016020
Pfam:PF08845 SymE_toxin > GO:RNA binding ; GO:0003723
Pfam:PF08845 SymE_toxin > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF08845 SymE_toxin > GO:RNA metabolic process ; GO:0016070
Pfam:PF08845 SymE_toxin > GO:cytoplasm ; GO:0005737
Pfam:PF08880 QLQ > GO:ATP binding ; GO:0005524
Pfam:PF08880 QLQ > GO:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides ; GO:0016818
Pfam:PF08880 QLQ > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF08880 QLQ > GO:nucleus ; GO:0005634
Pfam:PF08911 NUP50 > GO:nuclear pore ; GO:0005643
Pfam:PF08912 Rho_Binding > GO:Rho GTPase binding ; GO:0017048
Pfam:PF08915 tRNA-Thr_ED > GO:threonine-tRNA ligase activity ; GO:0004829
Pfam:PF08915 tRNA-Thr_ED > GO:ATP binding ; GO:0005524
Pfam:PF08915 tRNA-Thr_ED > GO:zinc ion binding ; GO:0008270
Pfam:PF08915 tRNA-Thr_ED > GO:cytoplasm ; GO:0005737
Pfam:PF08916 Phe_ZIP > GO:signal transducer activity ; GO:0004871
Pfam:PF08916 Phe_ZIP > GO:intracellular signal transduction ; GO:0035556
Pfam:PF08917 ecTbetaR2 > GO:transforming growth factor beta receptor activity, type II ; GO:0005026
Pfam:PF08917 ecTbetaR2 > GO:ATP binding ; GO:0005524
Pfam:PF08917 ecTbetaR2 > GO:metal ion binding ; GO:0046872
Pfam:PF08917 ecTbetaR2 > GO:protein phosphorylation ; GO:0006468
Pfam:PF08917 ecTbetaR2 > GO:membrane ; GO:0016020
Pfam:PF08918 PhoQ_Sensor > GO:protein histidine kinase activity ; GO:0004673
Pfam:PF08918 PhoQ_Sensor > GO:ATP binding ; GO:0005524
Pfam:PF08918 PhoQ_Sensor > GO:metal ion binding ; GO:0046872
Pfam:PF08918 PhoQ_Sensor > GO:phosphorelay signal transduction system ; GO:0000160
Pfam:PF08918 PhoQ_Sensor > GO:peptidyl-histidine phosphorylation ; GO:0018106
Pfam:PF08918 PhoQ_Sensor > GO:membrane ; GO:0016020
Pfam:PF08919 F_actin_bind > GO:non-membrane spanning protein tyrosine kinase activity ; GO:0004715
Pfam:PF08919 F_actin_bind > GO:ATP binding ; GO:0005524
Pfam:PF08919 F_actin_bind > GO:protein phosphorylation ; GO:0006468
Pfam:PF08923 MAPKK1_Int > GO:regulation of TOR signaling ; GO:0032006
Pfam:PF08925 DUF1907 > GO:nucleus ; GO:0005634
Pfam:PF08926 DUF1908 > GO:magnesium ion binding ; GO:0000287
Pfam:PF08926 DUF1908 > GO:protein serine/threonine kinase activity ; GO:0004674
Pfam:PF08926 DUF1908 > GO:ATP binding ; GO:0005524
Pfam:PF08926 DUF1908 > GO:protein phosphorylation ; GO:0006468
Pfam:PF08935 VP4_2 > GO:icosahedral viral capsid ; GO:0019030
Pfam:PF08941 USP8_interact > GO:acid-amino acid ligase activity ; GO:0016881
Pfam:PF08941 USP8_interact > GO:protein tag ; GO:0031386
Pfam:PF08941 USP8_interact > GO:protein ubiquitination ; GO:0016567
Pfam:PF08943 CsiD > GO:iron ion binding ; GO:0005506
Pfam:PF08964 Crystall_3 > GO:single organismal cell-cell adhesion ; GO:0016337
Pfam:PF08964 Crystall_3 > GO:membrane ; GO:0016020
Pfam:PF08971 GlgS > GO:glycogen biosynthetic process ; GO:0005978
Pfam:PF08988 DUF1895 > GO:pathogenesis ; GO:0009405
Pfam:PF08990 Docking > GO:transferase activity ; GO:0016740
Pfam:PF08990 Docking > GO:cofactor binding ; GO:0048037
Pfam:PF08992 QH-AmDH_gamma > GO:oxidoreductase activity, acting on the CH-NH2 group of donors ; GO:0016638
Pfam:PF08992 QH-AmDH_gamma > GO:oxidation-reduction process ; GO:0055114
Pfam:PF08996 zf-DNA_Pol > GO:nucleoside binding ; GO:0001882
Pfam:PF08996 zf-DNA_Pol > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF08996 zf-DNA_Pol > GO:DNA replication ; GO:0006260
Pfam:PF08997 UCR_6-4kD > GO:ubiquinol-cytochrome-c reductase activity ; GO:0008121
Pfam:PF08997 UCR_6-4kD > GO:electron carrier activity ; GO:0009055
Pfam:PF08998 Epsilon_antitox > GO:toxic substance binding ; GO:0015643
Pfam:PF08998 Epsilon_antitox > GO:response to toxic substance ; GO:0009636
Pfam:PF08998 Epsilon_antitox > GO:negative regulation of cell killing ; GO:0031342
Pfam:PF09000 Cytotoxic > GO:RNA binding ; GO:0003723
Pfam:PF09000 Cytotoxic > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF09000 Cytotoxic > GO:ribosome binding ; GO:0043022
Pfam:PF09000 Cytotoxic > GO:pathogenesis ; GO:0009405
Pfam:PF09003 Phage_integ_N > GO:DNA binding ; GO:0003677
Pfam:PF09003 Phage_integ_N > GO:integrase activity ; GO:0008907
Pfam:PF09003 Phage_integ_N > GO:DNA integration ; GO:0015074
Pfam:PF09004 DUF1891 > GO:methyltransferase activity ; GO:0008168
Pfam:PF09004 DUF1891 > GO:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors ; GO:0016706
Pfam:PF09004 DUF1891 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF09008 Head_binding > GO:pathogenesis ; GO:0009405
Pfam:PF09009 Exotox-A_cataly > GO:NAD+-diphthamide ADP-ribosyltransferase activity ; GO:0047286
Pfam:PF09013 YopH_N > GO:protein tyrosine phosphatase activity ; GO:0004725
Pfam:PF09013 YopH_N > GO:protein dephosphorylation ; GO:0006470
Pfam:PF09013 YopH_N > GO:pathogenesis ; GO:0009405
Pfam:PF09019 EcoRII-C > GO:DNA binding ; GO:0003677
Pfam:PF09019 EcoRII-C > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF09019 EcoRII-C > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF09020 YopE_N > GO:negative regulation of phagocytosis ; GO:0050765
Pfam:PF09025 YopR_core > GO:pathogenesis ; GO:0009405
Pfam:PF09025 YopR_core > GO:protein secretion by the type III secretion system ; GO:0030254
Pfam:PF09025 YopR_core > GO:type III protein secretion system complex ; GO:0030257
Pfam:PF09026 CENP-B_dimeris > GO:DNA binding ; GO:0003677
Pfam:PF09026 CENP-B_dimeris > GO:chromatin binding ; GO:0003682
Pfam:PF09026 CENP-B_dimeris > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF09026 CENP-B_dimeris > GO:chromosome, centromeric region ; GO:0000775
Pfam:PF09026 CENP-B_dimeris > GO:nucleus ; GO:0005634
Pfam:PF09029 Preseq_ALAS > GO:5-aminolevulinate synthase activity ; GO:0003870
Pfam:PF09029 Preseq_ALAS > GO:pyridoxal phosphate binding ; GO:0030170
Pfam:PF09029 Preseq_ALAS > GO:porphyrin-containing compound metabolic process ; GO:0006778
Pfam:PF09029 Preseq_ALAS > GO:mitochondrial matrix ; GO:0005759
Pfam:PF09030 Creb_binding > GO:transcription coactivator activity ; GO:0003713
Pfam:PF09030 Creb_binding > GO:histone acetyltransferase activity ; GO:0004402
Pfam:PF09030 Creb_binding > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF09030 Creb_binding > GO:histone acetylation ; GO:0016573
Pfam:PF09030 Creb_binding > GO:histone acetyltransferase complex ; GO:0000123
Pfam:PF09030 Creb_binding > GO:nucleus ; GO:0005634
Pfam:PF09034 TRADD_N > GO:signal transducer activity ; GO:0004871
Pfam:PF09034 TRADD_N > GO:protein binding ; GO:0005515
Pfam:PF09034 TRADD_N > GO:positive regulation of I-kappaB kinase/NF-kappaB signaling ; GO:0043123
Pfam:PF09036 Bcr-Abl_Oligo > GO:protein serine/threonine kinase activity ; GO:0004674
Pfam:PF09036 Bcr-Abl_Oligo > GO:GTPase activator activity ; GO:0005096
Pfam:PF09036 Bcr-Abl_Oligo > GO:protein phosphorylation ; GO:0006468
Pfam:PF09036 Bcr-Abl_Oligo > GO:signal transduction ; GO:0007165
Pfam:PF09040 H-K_ATPase_N > GO:magnesium ion binding ; GO:0000287
Pfam:PF09040 H-K_ATPase_N > GO:ATP binding ; GO:0005524
Pfam:PF09040 H-K_ATPase_N > GO:hydrogen:potassium-exchanging ATPase activity ; GO:0008900
Pfam:PF09040 H-K_ATPase_N > GO:ATP hydrolysis coupled proton transport ; GO:0015991
Pfam:PF09040 H-K_ATPase_N > GO:membrane ; GO:0016020
Pfam:PF09048 Cro > GO:DNA binding ; GO:0003677
Pfam:PF09048 Cro > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF09055 Sod_Ni > GO:superoxide dismutase activity ; GO:0004784
Pfam:PF09055 Sod_Ni > GO:nickel cation binding ; GO:0016151
Pfam:PF09055 Sod_Ni > GO:antioxidant activity ; GO:0016209
Pfam:PF09057 Smac_DIABLO > GO:apoptotic process ; GO:0006915
Pfam:PF09057 Smac_DIABLO > GO:activation of cysteine-type endopeptidase activity involved in apoptotic process ; GO:0006919
Pfam:PF09057 Smac_DIABLO > GO:mitochondrion ; GO:0005739
Pfam:PF09061 Stirrup > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF09064 Tme5_EGF_like > GO:transmembrane signaling receptor activity ; GO:0004888
Pfam:PF09064 Tme5_EGF_like > GO:integral component of membrane ; GO:0016021
Pfam:PF09066 B2-adapt-app_C > GO:intracellular protein transport ; GO:0006886
Pfam:PF09066 B2-adapt-app_C > GO:vesicle-mediated transport ; GO:0016192
Pfam:PF09066 B2-adapt-app_C > GO:clathrin adaptor complex ; GO:0030131
Pfam:PF09074 Mer2 > GO:reciprocal meiotic recombination ; GO:0007131
Pfam:PF09074 Mer2 > GO:condensed nuclear chromosome ; GO:0000794
Pfam:PF09077 Phage-MuB_C > GO:DNA binding ; GO:0003677
Pfam:PF09077 Phage-MuB_C > GO:transposition, DNA-mediated ; GO:0006313
Pfam:PF09085 Adhes-Ig_like > GO:cell adhesion ; GO:0007155
Pfam:PF09085 Adhes-Ig_like > GO:membrane ; GO:0016020
Pfam:PF09088 MIF4G_like > GO:RNA metabolic process ; GO:0016070
Pfam:PF09090 MIF4G_like_2 > GO:RNA metabolic process ; GO:0016070
Pfam:PF09095 DUF1926 > GO:catalytic activity ; GO:0003824
Pfam:PF09095 DUF1926 > GO:carbohydrate binding ; GO:0030246
Pfam:PF09095 DUF1926 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF09103 BRCA-2_OB1 > GO:double-strand break repair via homologous recombination ; GO:0000724
Pfam:PF09106 SelB-wing_2 > GO:RNA binding ; GO:0003723
Pfam:PF09106 SelB-wing_2 > GO:translation elongation factor activity ; GO:0003746
Pfam:PF09106 SelB-wing_2 > GO:GTP binding ; GO:0005525
Pfam:PF09106 SelB-wing_2 > GO:selenocysteine incorporation ; GO:0001514
Pfam:PF09106 SelB-wing_2 > GO:cytoplasm ; GO:0005737
Pfam:PF09107 SelB-wing_3 > GO:RNA binding ; GO:0003723
Pfam:PF09107 SelB-wing_3 > GO:translation elongation factor activity ; GO:0003746
Pfam:PF09107 SelB-wing_3 > GO:GTP binding ; GO:0005525
Pfam:PF09107 SelB-wing_3 > GO:selenocysteine incorporation ; GO:0001514
Pfam:PF09107 SelB-wing_3 > GO:cytoplasm ; GO:0005737
Pfam:PF09110 HAND > GO:nucleosome binding ; GO:0031491
Pfam:PF09110 HAND > GO:ATP-dependent chromatin remodeling ; GO:0043044
Pfam:PF09111 SLIDE > GO:nucleic acid binding ; GO:0003676
Pfam:PF09111 SLIDE > GO:ATP binding ; GO:0005524
Pfam:PF09111 SLIDE > GO:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides ; GO:0016818
Pfam:PF09111 SLIDE > GO:chromatin remodeling ; GO:0006338
Pfam:PF09111 SLIDE > GO:nucleus ; GO:0005634
Pfam:PF09115 DNApol3-delta_C > GO:DNA binding ; GO:0003677
Pfam:PF09115 DNApol3-delta_C > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF09115 DNApol3-delta_C > GO:DNA replication ; GO:0006260
Pfam:PF09115 DNApol3-delta_C > GO:DNA polymerase III complex ; GO:0009360
Pfam:PF09117 MiAMP1 > GO:defense response ; GO:0006952
Pfam:PF09117 MiAMP1 > GO:negative regulation of growth ; GO:0045926
Pfam:PF09119 SicP-binding > GO:extracellular space ; GO:0005615
Pfam:PF09127 Leuk-A4-hydro_C > GO:metallopeptidase activity ; GO:0008237
Pfam:PF09127 Leuk-A4-hydro_C > GO:zinc ion binding ; GO:0008270
Pfam:PF09127 Leuk-A4-hydro_C > GO:leukotriene biosynthetic process ; GO:0019370
Pfam:PF09128 RGS-like > GO:Rho guanyl-nucleotide exchange factor activity ; GO:0005089
Pfam:PF09128 RGS-like > GO:cytoplasm ; GO:0005737
Pfam:PF09138 Urm1 > GO:tRNA thio-modification ; GO:0034227
Pfam:PF09138 Urm1 > GO:cytoplasm ; GO:0005737
Pfam:PF09141 Talin_middle > GO:structural constituent of cytoskeleton ; GO:0005200
Pfam:PF09141 Talin_middle > GO:cytoskeletal anchoring at plasma membrane ; GO:0007016
Pfam:PF09141 Talin_middle > GO:ruffle ; GO:0001726
Pfam:PF09141 Talin_middle > GO:focal adhesion ; GO:0005925
Pfam:PF09142 TruB_C > GO:RNA binding ; GO:0003723
Pfam:PF09142 TruB_C > GO:pseudouridine synthase activity ; GO:0009982
Pfam:PF09142 TruB_C > GO:pseudouridine synthesis ; GO:0001522
Pfam:PF09142 TruB_C > GO:RNA modification ; GO:0009451
Pfam:PF09150 Carot_N > GO:chloride ion binding ; GO:0031404
Pfam:PF09150 Carot_N > GO:light absorption ; GO:0016037
Pfam:PF09150 Carot_N > GO:phycobilisome ; GO:0030089
Pfam:PF09153 DUF1938 > GO:cytoplasm ; GO:0005737
Pfam:PF09154 DUF1939 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF09157 TruB-C_2 > GO:RNA binding ; GO:0003723
Pfam:PF09157 TruB-C_2 > GO:pseudouridine synthase activity ; GO:0009982
Pfam:PF09157 TruB-C_2 > GO:pseudouridine synthesis ; GO:0001522
Pfam:PF09157 TruB-C_2 > GO:RNA modification ; GO:0009451
Pfam:PF09162 Tap-RNA_bind > GO:RNA binding ; GO:0003723
Pfam:PF09162 Tap-RNA_bind > GO:mRNA export from nucleus ; GO:0006406
Pfam:PF09162 Tap-RNA_bind > GO:nucleus ; GO:0005634
Pfam:PF09162 Tap-RNA_bind > GO:cytoplasm ; GO:0005737
Pfam:PF09165 Ubiq-Cytc-red_N > GO:ubiquinol-cytochrome-c reductase activity ; GO:0008121
Pfam:PF09165 Ubiq-Cytc-red_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF09166 Biliv-reduc_cat > GO:biliverdin reductase activity ; GO:0004074
Pfam:PF09166 Biliv-reduc_cat > GO:zinc ion binding ; GO:0008270
Pfam:PF09166 Biliv-reduc_cat > GO:heme catabolic process ; GO:0042167
Pfam:PF09166 Biliv-reduc_cat > GO:oxidation-reduction process ; GO:0055114
Pfam:PF09167 DUF1942 > GO:extracellular space ; GO:0005615
Pfam:PF09168 PepX_N > GO:dipeptidyl-peptidase activity ; GO:0008239
Pfam:PF09168 PepX_N > GO:proteolysis ; GO:0006508
Pfam:PF09169 BRCA-2_helical > GO:single-stranded DNA binding ; GO:0003697
Pfam:PF09169 BRCA-2_helical > GO:double-strand break repair via homologous recombination ; GO:0000724
Pfam:PF09169 BRCA-2_helical > GO:DNA recombination ; GO:0006310
Pfam:PF09171 DUF1886 > GO:DNA-(apurinic or apyrimidinic site) lyase activity ; GO:0003906
Pfam:PF09171 DUF1886 > GO:hydrolase activity, hydrolyzing N-glycosyl compounds ; GO:0016799
Pfam:PF09172 DUF1943 > GO:lipid transporter activity ; GO:0005319
Pfam:PF09172 DUF1943 > GO:lipid transport ; GO:0006869
Pfam:PF09174 Maf1 > GO:negative regulation of transcription from RNA polymerase III promoter ; GO:0016480
Pfam:PF09175 DUF1944 > GO:lipid transporter activity ; GO:0005319
Pfam:PF09175 DUF1944 > GO:lipid transport ; GO:0006869
Pfam:PF09177 Syntaxin-6_N > GO:Golgi vesicle transport ; GO:0048193
Pfam:PF09177 Syntaxin-6_N > GO:membrane ; GO:0016020
Pfam:PF09179 TilS > GO:nucleotide binding ; GO:0000166
Pfam:PF09179 TilS > GO:ATP binding ; GO:0005524
Pfam:PF09179 TilS > GO:ligase activity, forming carbon-nitrogen bonds ; GO:0016879
Pfam:PF09179 TilS > GO:tRNA processing ; GO:0008033
Pfam:PF09179 TilS > GO:cytoplasm ; GO:0005737
Pfam:PF09180 ProRS-C_1 > GO:nucleotide binding ; GO:0000166
Pfam:PF09180 ProRS-C_1 > GO:proline-tRNA ligase activity ; GO:0004827
Pfam:PF09180 ProRS-C_1 > GO:ATP binding ; GO:0005524
Pfam:PF09180 ProRS-C_1 > GO:prolyl-tRNA aminoacylation ; GO:0006433
Pfam:PF09180 ProRS-C_1 > GO:cytoplasm ; GO:0005737
Pfam:PF09181 ProRS-C_2 > GO:nucleotide binding ; GO:0000166
Pfam:PF09181 ProRS-C_2 > GO:proline-tRNA ligase activity ; GO:0004827
Pfam:PF09181 ProRS-C_2 > GO:ATP binding ; GO:0005524
Pfam:PF09181 ProRS-C_2 > GO:prolyl-tRNA aminoacylation ; GO:0006433
Pfam:PF09181 ProRS-C_2 > GO:cytoplasm ; GO:0005737
Pfam:PF09182 PuR_N > GO:DNA binding ; GO:0003677
Pfam:PF09182 PuR_N > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF09187 DUF1950 > GO:regulation of DNA methylation ; GO:0044030
Pfam:PF09187 DUF1950 > GO:nucleus ; GO:0005634
Pfam:PF09190 DALR_2 > GO:nucleotide binding ; GO:0000166
Pfam:PF09190 DALR_2 > GO:cysteine-tRNA ligase activity ; GO:0004817
Pfam:PF09190 DALR_2 > GO:ATP binding ; GO:0005524
Pfam:PF09190 DALR_2 > GO:cysteinyl-tRNA aminoacylation ; GO:0006423
Pfam:PF09190 DALR_2 > GO:cytoplasm ; GO:0005737
Pfam:PF09194 Endonuc-BsobI > GO:DNA binding ; GO:0003677
Pfam:PF09194 Endonuc-BsobI > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF09194 Endonuc-BsobI > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF09202 Rio2_N > GO:protein serine/threonine kinase activity ; GO:0004674
Pfam:PF09202 Rio2_N > GO:ATP binding ; GO:0005524
Pfam:PF09202 Rio2_N > GO:protein phosphorylation ; GO:0006468
Pfam:PF09204 Colicin_immun > GO:toxic substance binding ; GO:0015643
Pfam:PF09204 Colicin_immun > GO:bacteriocin immunity ; GO:0030153
Pfam:PF09206 ArabFuran-catal > GO:alpha-L-arabinofuranosidase activity ; GO:0046556
Pfam:PF09206 ArabFuran-catal > GO:arabinan metabolic process ; GO:0031221
Pfam:PF09207 Yeast-kill-tox > GO:cell death ; GO:0008219
Pfam:PF09207 Yeast-kill-tox > GO:pathogenesis ; GO:0009405
Pfam:PF09207 Yeast-kill-tox > GO:extracellular region ; GO:0005576
Pfam:PF09208 Endonuc-MspI > GO:DNA binding ; GO:0003677
Pfam:PF09208 Endonuc-MspI > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF09208 Endonuc-MspI > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF09213 M3 > GO:chemokine binding ; GO:0019956
Pfam:PF09222 Fim-adh_lectin > GO:adhesion of symbiont to host ; GO:0044406
Pfam:PF09222 Fim-adh_lectin > GO:pilus ; GO:0009289
Pfam:PF09223 YodA > GO:zinc ion binding ; GO:0008270
Pfam:PF09226 Endonuc-HincII > GO:DNA binding ; GO:0003677
Pfam:PF09226 Endonuc-HincII > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF09226 Endonuc-HincII > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF09228 Prok-TraM > GO:negative regulation of transcription, DNA-templated ; GO:0045892
Pfam:PF09229 Aha1_N > GO:ATPase activator activity ; GO:0001671
Pfam:PF09229 Aha1_N > GO:chaperone binding ; GO:0051087
Pfam:PF09230 DFF40 > GO:hydrolase activity ; GO:0016787
Pfam:PF09230 DFF40 > GO:apoptotic DNA fragmentation ; GO:0006309
Pfam:PF09230 DFF40 > GO:nucleus ; GO:0005634
Pfam:PF09230 DFF40 > GO:cytoplasm ; GO:0005737
Pfam:PF09231 RDV-p3 > GO:structural molecule activity ; GO:0005198
Pfam:PF09236 AHSP > GO:hemoglobin binding ; GO:0030492
Pfam:PF09236 AHSP > GO:protein folding ; GO:0006457
Pfam:PF09236 AHSP > GO:hemoglobin metabolic process ; GO:0020027
Pfam:PF09236 AHSP > GO:hemopoiesis ; GO:0030097
Pfam:PF09236 AHSP > GO:protein stabilization ; GO:0050821
Pfam:PF09238 IL4Ra_N > GO:cytokine receptor activity ; GO:0004896
Pfam:PF09238 IL4Ra_N > GO:production of molecular mediator involved in inflammatory response ; GO:0002532
Pfam:PF09238 IL4Ra_N > GO:integral component of membrane ; GO:0016021
Pfam:PF09239 Topo-VIb_trans > GO:DNA binding ; GO:0003677
Pfam:PF09239 Topo-VIb_trans > GO:DNA topoisomerase type II (ATP-hydrolyzing) activity ; GO:0003918
Pfam:PF09239 Topo-VIb_trans > GO:DNA topological change ; GO:0006265
Pfam:PF09243 Rsm22 > GO:methyltransferase activity ; GO:0008168
Pfam:PF09243 Rsm22 > GO:translation ; GO:0006412
Pfam:PF09249 tRNA_NucTransf2 > GO:tRNA adenylyltransferase activity ; GO:0004810
Pfam:PF09249 tRNA_NucTransf2 > GO:tRNA cytidylyltransferase activity ; GO:0016437
Pfam:PF09252 Feld-I_B > GO:extracellular space ; GO:0005615
Pfam:PF09254 Endonuc-FokI_C > GO:DNA binding ; GO:0003677
Pfam:PF09254 Endonuc-FokI_C > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF09254 Endonuc-FokI_C > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF09258 Glyco_transf_64 > GO:transferase activity, transferring hexosyl groups ; GO:0016758
Pfam:PF09258 Glyco_transf_64 > GO:intrinsic component of endoplasmic reticulum membrane ; GO:0031227
Pfam:PF09259 Fve > GO:carbohydrate binding ; GO:0030246
Pfam:PF09259 Fve > GO:regulation of immune system process ; GO:0002682
Pfam:PF09260 DUF1966 > GO:alpha-amylase activity ; GO:0004556
Pfam:PF09260 DUF1966 > GO:calcium ion binding ; GO:0005509
Pfam:PF09260 DUF1966 > GO:carbohydrate catabolic process ; GO:0016052
Pfam:PF09261 Alpha-mann_mid > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF09261 Alpha-mann_mid > GO:zinc ion binding ; GO:0008270
Pfam:PF09262 PEX-1N > GO:ATP binding ; GO:0005524
Pfam:PF09262 PEX-1N > GO:peroxisome organization ; GO:0007031
Pfam:PF09262 PEX-1N > GO:peroxisome ; GO:0005777
Pfam:PF09264 Sial-lect-inser > GO:sialic acid binding ; GO:0033691
Pfam:PF09265 Cytokin-bind > GO:cytokinin dehydrogenase activity ; GO:0019139
Pfam:PF09265 Cytokin-bind > GO:flavin adenine dinucleotide binding ; GO:0050660
Pfam:PF09265 Cytokin-bind > GO:cytokinin metabolic process ; GO:0009690
Pfam:PF09265 Cytokin-bind > GO:oxidation-reduction process ; GO:0055114
Pfam:PF09266 VirDNA-topo-I_N > GO:DNA binding ; GO:0003677
Pfam:PF09266 VirDNA-topo-I_N > GO:DNA topoisomerase activity ; GO:0003916
Pfam:PF09266 VirDNA-topo-I_N > GO:DNA topological change ; GO:0006265
Pfam:PF09268 Clathrin-link > GO:structural molecule activity ; GO:0005198
Pfam:PF09268 Clathrin-link > GO:intracellular protein transport ; GO:0006886
Pfam:PF09268 Clathrin-link > GO:vesicle-mediated transport ; GO:0016192
Pfam:PF09268 Clathrin-link > GO:clathrin coat of trans-Golgi network vesicle ; GO:0030130
Pfam:PF09268 Clathrin-link > GO:clathrin coat of coated pit ; GO:0030132
Pfam:PF09269 DUF1967 > GO:nucleotide binding ; GO:0000166
Pfam:PF09270 BTD > GO:RNA polymerase II core promoter proximal region sequence-specific DNA binding ; GO:0000978
Pfam:PF09270 BTD > GO:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity ; GO:0000982
Pfam:PF09270 BTD > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF09270 BTD > GO:nucleus ; GO:0005634
Pfam:PF09271 LAG1-DNAbind > GO:DNA binding ; GO:0003677
Pfam:PF09271 LAG1-DNAbind > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF09271 LAG1-DNAbind > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF09271 LAG1-DNAbind > GO:nucleus ; GO:0005634
Pfam:PF09272 Hepsin-SRCR > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF09272 Hepsin-SRCR > GO:serine-type exopeptidase activity ; GO:0070008
Pfam:PF09280 XPC-binding > GO:damaged DNA binding ; GO:0003684
Pfam:PF09280 XPC-binding > GO:nucleotide-excision repair ; GO:0006289
Pfam:PF09280 XPC-binding > GO:proteasome-mediated ubiquitin-dependent protein catabolic process ; GO:0043161
Pfam:PF09281 Taq-exonuc > GO:nucleoside binding ; GO:0001882
Pfam:PF09281 Taq-exonuc > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF09281 Taq-exonuc > GO:DNA replication ; GO:0006260
Pfam:PF09281 Taq-exonuc > GO:DNA repair ; GO:0006281
Pfam:PF09282 Mago-bind > GO:protein binding ; GO:0005515
Pfam:PF09284 RhgB_N > GO:carbon-oxygen lyase activity, acting on polysaccharides ; GO:0016837
Pfam:PF09284 RhgB_N > GO:carbohydrate binding ; GO:0030246
Pfam:PF09284 RhgB_N > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF09285 Elong-fact-P_C > GO:peptide biosynthetic process ; GO:0043043
Pfam:PF09285 Elong-fact-P_C > GO:cytoplasm ; GO:0005737
Pfam:PF09286 Pro-kuma_activ > GO:serine-type peptidase activity ; GO:0008236
Pfam:PF09289 FOLN > GO:protein binding ; GO:0005515
Pfam:PF09290 AcetDehyd-dimer > GO:acetaldehyde dehydrogenase (acetylating) activity ; GO:0008774
Pfam:PF09290 AcetDehyd-dimer > GO:aromatic compound catabolic process ; GO:0019439
Pfam:PF09290 AcetDehyd-dimer > GO:oxidation-reduction process ; GO:0055114
Pfam:PF09293 RNaseH_C > GO:DNA binding ; GO:0003677
Pfam:PF09293 RNaseH_C > GO:catalytic activity ; GO:0003824
Pfam:PF09296 NUDIX-like > GO:hydrolase activity ; GO:0016787
Pfam:PF09297 zf-NADH-PPase > GO:hydrolase activity ; GO:0016787
Pfam:PF09297 zf-NADH-PPase > GO:metal ion binding ; GO:0046872
Pfam:PF09298 FAA_hydrolase_N > GO:fumarylacetoacetase activity ; GO:0004334
Pfam:PF09298 FAA_hydrolase_N > GO:aromatic amino acid family metabolic process ; GO:0009072
Pfam:PF09302 XLF > GO:DNA repair ; GO:0006281
Pfam:PF09302 XLF > GO:nucleus ; GO:0005634
Pfam:PF09307 MHC2-interact > GO:MHC class II protein binding ; GO:0042289
Pfam:PF09307 MHC2-interact > GO:intracellular protein transport ; GO:0006886
Pfam:PF09307 MHC2-interact > GO:immune response ; GO:0006955
Pfam:PF09307 MHC2-interact > GO:antigen processing and presentation ; GO:0019882
Pfam:PF09307 MHC2-interact > GO:membrane ; GO:0016020
Pfam:PF09308 LuxQ-periplasm > GO:protein histidine kinase activity ; GO:0004673
Pfam:PF09308 LuxQ-periplasm > GO:phosphatase activity ; GO:0016791
Pfam:PF09317 DUF1974 > GO:acyl-CoA dehydrogenase activity ; GO:0003995
Pfam:PF09317 DUF1974 > GO:fatty acid beta-oxidation using acyl-CoA dehydrogenase ; GO:0033539
Pfam:PF09317 DUF1974 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF09326 DUF1982 > GO:oxidoreductase activity, acting on NAD(P)H ; GO:0016651
Pfam:PF09326 DUF1982 > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF09326 DUF1982 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF09328 Phytochelatin_C > GO:glutathione gamma-glutamylcysteinyltransferase activity ; GO:0016756
Pfam:PF09328 Phytochelatin_C > GO:metal ion binding ; GO:0046872
Pfam:PF09328 Phytochelatin_C > GO:response to metal ion ; GO:0010038
Pfam:PF09328 Phytochelatin_C > GO:phytochelatin biosynthetic process ; GO:0046938
Pfam:PF09329 zf-primase > GO:DNA replication ; GO:0006260
Pfam:PF09329 zf-primase > GO:nucleus ; GO:0005634
Pfam:PF09330 Lact-deh-memb > GO:flavin adenine dinucleotide binding ; GO:0050660
Pfam:PF09330 Lact-deh-memb > GO:transmembrane transport ; GO:0055085
Pfam:PF09334 tRNA-synt_1g > GO:nucleotide binding ; GO:0000166
Pfam:PF09334 tRNA-synt_1g > GO:aminoacyl-tRNA ligase activity ; GO:0004812
Pfam:PF09334 tRNA-synt_1g > GO:ATP binding ; GO:0005524
Pfam:PF09334 tRNA-synt_1g > GO:tRNA aminoacylation for protein translation ; GO:0006418
Pfam:PF09338 Gly_reductase > GO:oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor ; GO:0050485
Pfam:PF09338 Gly_reductase > GO:oxidation-reduction process ; GO:0055114
Pfam:PF09339 HTH_IclR > GO:DNA binding ; GO:0003677
Pfam:PF09339 HTH_IclR > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF09360 zf-CDGSH > GO:2 iron, 2 sulfur cluster binding ; GO:0051537
Pfam:PF09360 zf-CDGSH > GO:intracellular membrane-bounded organelle ; GO:0043231
Pfam:PF09363 XFP_C > GO:aldehyde-lyase activity ; GO:0016832
Pfam:PF09363 XFP_C > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF09367 CpeS > GO:protein-phycocyanobilin linkage ; GO:0017009
Pfam:PF09377 SBDS_C > GO:ribosome biogenesis ; GO:0042254
Pfam:PF09382 RQC > GO:ATP-dependent 3'-5' DNA helicase activity ; GO:0043140
Pfam:PF09382 RQC > GO:DNA replication ; GO:0006260
Pfam:PF09382 RQC > GO:DNA repair ; GO:0006281
Pfam:PF09384 UTP15_C > GO:rRNA processing ; GO:0006364
Pfam:PF09384 UTP15_C > GO:nucleolus ; GO:0005730
Pfam:PF09387 MRP > GO:integral component of nuclear inner membrane ; GO:0005639
Pfam:PF09392 MxiH > GO:pathogenesis ; GO:0009405
Pfam:PF09392 MxiH > GO:protein transport ; GO:0015031
Pfam:PF09396 Thrombin_light > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF09396 Thrombin_light > GO:proteolysis ; GO:0006508
Pfam:PF09396 Thrombin_light > GO:blood coagulation ; GO:0007596
Pfam:PF09396 Thrombin_light > GO:extracellular region ; GO:0005576
Pfam:PF09398 FOP_dimer > GO:microtubule anchoring ; GO:0034453
Pfam:PF09398 FOP_dimer > GO:microtubule organizing center ; GO:0005815
Pfam:PF09401 NSP10 > GO:RNA binding ; GO:0003723
Pfam:PF09401 NSP10 > GO:zinc ion binding ; GO:0008270
Pfam:PF09401 NSP10 > GO:viral genome replication ; GO:0019079
Pfam:PF09402 MSC > GO:integral component of nuclear inner membrane ; GO:0005639
Pfam:PF09412 XendoU > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF09415 CENP-X > GO:DNA repair ; GO:0006281
Pfam:PF09415 CENP-X > GO:kinetochore assembly ; GO:0051382
Pfam:PF09416 UPF1_Zn_bind > GO:DNA binding ; GO:0003677
Pfam:PF09416 UPF1_Zn_bind > GO:helicase activity ; GO:0004386
Pfam:PF09416 UPF1_Zn_bind > GO:ATP binding ; GO:0005524
Pfam:PF09416 UPF1_Zn_bind > GO:zinc ion binding ; GO:0008270
Pfam:PF09416 UPF1_Zn_bind > GO:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay ; GO:0000184
Pfam:PF09416 UPF1_Zn_bind > GO:cytoplasm ; GO:0005737
Pfam:PF09421 FRQ > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF09421 FRQ > GO:circadian rhythm ; GO:0007623
Pfam:PF09421 FRQ > GO:nucleus ; GO:0005634
Pfam:PF09421 FRQ > GO:cytoplasm ; GO:0005737
Pfam:PF09429 Wbp11 > GO:RNA processing ; GO:0006396
Pfam:PF09445 Methyltransf_15 > GO:methyltransferase activity ; GO:0008168
Pfam:PF09445 Methyltransf_15 > GO:RNA methylation ; GO:0001510
Pfam:PF09445 Methyltransf_15 > GO:7-methylguanosine RNA capping ; GO:0009452
Pfam:PF09453 HIRA_B > GO:chromatin binding ; GO:0003682
Pfam:PF09453 HIRA_B > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF09453 HIRA_B > GO:chromatin modification ; GO:0016568
Pfam:PF09453 HIRA_B > GO:nucleus ; GO:0005634
Pfam:PF09456 RcsC > GO:protein histidine kinase activity ; GO:0004673
Pfam:PF09456 RcsC > GO:signal transducer activity ; GO:0004871
Pfam:PF09456 RcsC > GO:ATP binding ; GO:0005524
Pfam:PF09456 RcsC > GO:phosphorelay signal transduction system ; GO:0000160
Pfam:PF09456 RcsC > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF09456 RcsC > GO:peptidyl-histidine phosphorylation ; GO:0018106
Pfam:PF09456 RcsC > GO:plasma membrane ; GO:0005886
Pfam:PF09456 RcsC > GO:integral component of membrane ; GO:0016021
Pfam:PF09458 H_lectin > GO:carbohydrate binding ; GO:0030246
Pfam:PF09458 H_lectin > GO:cell adhesion ; GO:0007155
Pfam:PF09459 EB_dh > GO:heme binding ; GO:0020037
Pfam:PF09468 RNase_H2-Ydr279 > GO:nucleus ; GO:0005634
Pfam:PF09472 MtrF > GO:tetrahydromethanopterin S-methyltransferase activity ; GO:0030269
Pfam:PF09472 MtrF > GO:methanogenesis ; GO:0015948
Pfam:PF09472 MtrF > GO:membrane ; GO:0016020
Pfam:PF09477 Type_III_YscG > GO:pathogenesis ; GO:0009405
Pfam:PF09478 CBM49 > GO:carbohydrate binding ; GO:0030246
Pfam:PF09480 PrgH > GO:integral component of membrane ; GO:0016021
Pfam:PF09482 OrgA_MxiK > GO:pathogenesis ; GO:0009405
Pfam:PF09488 Osmo_MPGsynth > GO:mannosyl-3-phosphoglycerate synthase activity ; GO:0050504
Pfam:PF09488 Osmo_MPGsynth > GO:mannosylglycerate biosynthetic process ; GO:0051479
Pfam:PF09488 Osmo_MPGsynth > GO:cytoplasm ; GO:0005737
Pfam:PF09494 Slx4 > GO:5'-flap endonuclease activity ; GO:0017108
Pfam:PF09494 Slx4 > GO:DNA replication ; GO:0006260
Pfam:PF09494 Slx4 > GO:DNA repair ; GO:0006281
Pfam:PF09494 Slx4 > GO:nucleus ; GO:0005634
Pfam:PF09494 Slx4 > GO:Slx1-Slx4 complex ; GO:0033557
Pfam:PF09496 CENP-O > GO:centromere complex assembly ; GO:0034508
Pfam:PF09496 CENP-O > GO:kinetochore ; GO:0000776
Pfam:PF09497 Med12 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF09497 Med12 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF09497 Med12 > GO:mediator complex ; GO:0016592
Pfam:PF09505 Dimeth_Pyl > GO:methyltransferase activity ; GO:0008168
Pfam:PF09505 Dimeth_Pyl > GO:methanogenesis ; GO:0015948
Pfam:PF09507 CDC27 > GO:DNA replication ; GO:0006260
Pfam:PF09507 CDC27 > GO:nucleus ; GO:0005634
Pfam:PF09508 Lact_bio_phlase > GO:transferase activity, transferring hexosyl groups ; GO:0016758
Pfam:PF09514 SSXRD > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF09514 SSXRD > GO:nucleus ; GO:0005634
Pfam:PF09515 Thia_YuaJ > GO:thiamine transmembrane transporter activity ; GO:0015234
Pfam:PF09515 Thia_YuaJ > GO:thiamine transport ; GO:0015888
Pfam:PF09515 Thia_YuaJ > GO:plasma membrane ; GO:0005886
Pfam:PF09519 RE_HindVP > GO:DNA binding ; GO:0003677
Pfam:PF09519 RE_HindVP > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF09519 RE_HindVP > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF09520 RE_TdeIII > GO:DNA binding ; GO:0003677
Pfam:PF09520 RE_TdeIII > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF09520 RE_TdeIII > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF09521 RE_NgoPII > GO:DNA binding ; GO:0003677
Pfam:PF09521 RE_NgoPII > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF09521 RE_NgoPII > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF09547 Spore_IV_A > GO:ATP binding ; GO:0005524
Pfam:PF09547 Spore_IV_A > GO:ATPase activity ; GO:0016887
Pfam:PF09547 Spore_IV_A > GO:sporulation ; GO:0043934
Pfam:PF09553 RE_Eco47II > GO:DNA binding ; GO:0003677
Pfam:PF09553 RE_Eco47II > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF09553 RE_Eco47II > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF09564 RE_NgoBV > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF09564 RE_NgoBV > GO:nucleic acid phosphodiester bond hydrolysis ; GO:0090305
Pfam:PF09567 RE_MamI > GO:DNA binding ; GO:0003677
Pfam:PF09567 RE_MamI > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF09567 RE_MamI > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF09568 RE_MjaI > GO:DNA binding ; GO:0003677
Pfam:PF09568 RE_MjaI > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF09568 RE_MjaI > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF09570 RE_SinI > GO:DNA binding ; GO:0003677
Pfam:PF09570 RE_SinI > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF09570 RE_SinI > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF09571 RE_XcyI > GO:magnesium ion binding ; GO:0000287
Pfam:PF09571 RE_XcyI > GO:DNA binding ; GO:0003677
Pfam:PF09571 RE_XcyI > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF09571 RE_XcyI > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF09572 RE_XamI > GO:DNA binding ; GO:0003677
Pfam:PF09572 RE_XamI > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF09572 RE_XamI > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF09573 RE_TaqI > GO:DNA binding ; GO:0003677
Pfam:PF09573 RE_TaqI > GO:Type II site-specific deoxyribonuclease activity ; GO:0009036
Pfam:PF09573 RE_TaqI > GO:DNA restriction-modification system ; GO:0009307
Pfam:PF09589 HrpA_pilin > GO:pathogenesis ; GO:0009405
Pfam:PF09589 HrpA_pilin > GO:extracellular space ; GO:0005615
Pfam:PF09594 DUF2029 > GO:transferase activity, transferring hexosyl groups ; GO:0016758
Pfam:PF09596 MamL-1 > GO:transcription coactivator activity ; GO:0003713
Pfam:PF09596 MamL-1 > GO:Notch signaling pathway ; GO:0007219
Pfam:PF09596 MamL-1 > GO:positive regulation of transcription from RNA polymerase II promoter ; GO:0045944
Pfam:PF09596 MamL-1 > GO:nuclear speck ; GO:0016607
Pfam:PF09599 IpaC_SipC > GO:pathogenesis ; GO:0009405
Pfam:PF09604 Potass_KdpF > GO:potassium-transporting ATPase activity ; GO:0008556
Pfam:PF09604 Potass_KdpF > GO:regulation of ATPase activity ; GO:0043462
Pfam:PF09604 Potass_KdpF > GO:plasma membrane ; GO:0005886
Pfam:PF09606 Med15 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF09606 Med15 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF09606 Med15 > GO:mediator complex ; GO:0016592
Pfam:PF09637 Med18 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF09637 Med18 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF09637 Med18 > GO:mediator complex ; GO:0016592
Pfam:PF09648 YycI > GO:integral component of membrane ; GO:0016021
Pfam:PF09663 Amido_AtzD_TrzD > GO:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides ; GO:0016812
Pfam:PF09668 Asp_protease > GO:aspartic-type endopeptidase activity ; GO:0004190
Pfam:PF09668 Asp_protease > GO:proteolysis ; GO:0006508
Pfam:PF09726 Macoilin > GO:integral component of membrane ; GO:0016021
Pfam:PF09728 Taxilin > GO:syntaxin binding ; GO:0019905
Pfam:PF09730 BicD > GO:transport ; GO:0006810
Pfam:PF09730 BicD > GO:Golgi apparatus ; GO:0005794
Pfam:PF09732 CactinC_cactus > GO:protein binding ; GO:0005515
Pfam:PF09748 Med10 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF09748 Med10 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF09748 Med10 > GO:mediator complex ; GO:0016592
Pfam:PF09749 HVSL > GO:nuclease activity ; GO:0004518
Pfam:PF09749 HVSL > GO:U6 snRNA 3'-end processing ; GO:0034477
Pfam:PF09764 Nt_Gln_amidase > GO:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides ; GO:0016811
Pfam:PF09768 Peptidase_M76 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF09771 Tmemb_18A > GO:positive regulation of protein dephosphorylation ; GO:0035307
Pfam:PF09771 Tmemb_18A > GO:Nem1-Spo7 phosphatase complex ; GO:0071595
Pfam:PF09773 Meckelin > GO:negative regulation of centrosome duplication ; GO:0010826
Pfam:PF09773 Meckelin > GO:cilium assembly ; GO:0042384
Pfam:PF09773 Meckelin > GO:TCTN-B9D complex ; GO:0036038
Pfam:PF09810 Exo5 > GO:single-stranded DNA 5'-3' exodeoxyribonuclease activity ; GO:0045145
Pfam:PF09830 ATP_transf > GO:ATP adenylyltransferase activity ; GO:0003877
Pfam:PF09907 DUF2136 > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF10018 Med4 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF10018 Med4 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF10018 Med4 > GO:mediator complex ; GO:0016592
Pfam:PF10034 Dpy19 > GO:integral component of membrane ; GO:0016021
Pfam:PF10044 Ret_tiss > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF10044 Ret_tiss > GO:cell cycle ; GO:0007049
Pfam:PF10044 Ret_tiss > GO:DRM complex ; GO:0070176
Pfam:PF10099 RskA > GO:plasma membrane ; GO:0005886
Pfam:PF10099 RskA > GO:integral component of membrane ; GO:0016021
Pfam:PF10104 Brr6_like_C_C > GO:mRNA export from nucleus ; GO:0006406
Pfam:PF10104 Brr6_like_C_C > GO:protein export from nucleus ; GO:0006611
Pfam:PF10104 Brr6_like_C_C > GO:nuclear envelope organization ; GO:0006998
Pfam:PF10104 Brr6_like_C_C > GO:nuclear membrane ; GO:0031965
Pfam:PF10120 Aldolase_2 > GO:thiamine-phosphate diphosphorylase activity ; GO:0004789
Pfam:PF10143 PhosphMutase > GO:catalytic activity ; GO:0003824
Pfam:PF10143 PhosphMutase > GO:metal ion binding ; GO:0046872
Pfam:PF10147 CR6_interact > GO:cell cycle ; GO:0007049
Pfam:PF10147 CR6_interact > GO:nucleus ; GO:0005634
Pfam:PF10150 RNase_E_G > GO:RNA binding ; GO:0003723
Pfam:PF10152 DUF2360 > GO:WASH complex ; GO:0071203
Pfam:PF10156 Med17 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF10156 Med17 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF10156 Med17 > GO:mediator complex ; GO:0016592
Pfam:PF10163 EnY2 > GO:transcription coactivator activity ; GO:0003713
Pfam:PF10163 EnY2 > GO:mRNA export from nucleus ; GO:0006406
Pfam:PF10163 EnY2 > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF10163 EnY2 > GO:SAGA complex ; GO:0000124
Pfam:PF10163 EnY2 > GO:nuclear pore ; GO:0005643
Pfam:PF10181 PIG-H > GO:phosphatidylinositol N-acetylglucosaminyltransferase activity ; GO:0017176
Pfam:PF10186 Atg14 > GO:positive regulation of autophagy ; GO:0010508
Pfam:PF10191 COG7 > GO:intracellular protein transport ; GO:0006886
Pfam:PF10191 COG7 > GO:Golgi transport complex ; GO:0017119
Pfam:PF10192 GpcrRhopsn4 > GO:G-protein coupled receptor signaling pathway ; GO:0007186
Pfam:PF10192 GpcrRhopsn4 > GO:response to pheromone ; GO:0019236
Pfam:PF10204 DuoxA > GO:protein transport ; GO:0015031
Pfam:PF10204 DuoxA > GO:endoplasmic reticulum membrane ; GO:0005789
Pfam:PF10204 DuoxA > GO:integral component of membrane ; GO:0016021
Pfam:PF10220 DUF2146 > GO:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay ; GO:0000184
Pfam:PF10229 DUF2246 > GO:cobalamin metabolic process ; GO:0009235
Pfam:PF10232 Med8 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF10232 Med8 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF10232 Med8 > GO:mediator complex ; GO:0016592
Pfam:PF10233 Cg6151-P > GO:integral component of membrane ; GO:0016021
Pfam:PF10255 Paf67 > GO:translation initiation factor activity ; GO:0003743
Pfam:PF10255 Paf67 > GO:cytoplasm ; GO:0005737
Pfam:PF10255 Paf67 > GO:eukaryotic translation initiation factor 3 complex ; GO:0005852
Pfam:PF10262 Rdx > GO:selenium binding ; GO:0008430
Pfam:PF10262 Rdx > GO:cell redox homeostasis ; GO:0045454
Pfam:PF10266 Strumpellin > GO:WASH complex ; GO:0071203
Pfam:PF10278 Med19 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF10278 Med19 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF10278 Med19 > GO:mediator complex ; GO:0016592
Pfam:PF10280 Med11 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF10280 Med11 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF10280 Med11 > GO:mediator complex ; GO:0016592
Pfam:PF10288 DUF2392 > GO:tRNA binding ; GO:0000049
Pfam:PF10288 DUF2392 > GO:tRNA wobble uridine modification ; GO:0002098
Pfam:PF10288 DUF2392 > GO:tRNA thio-modification ; GO:0034227
Pfam:PF10297 Hap4_Hap_bind > GO:DNA binding ; GO:0003677
Pfam:PF10297 Hap4_Hap_bind > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF10297 Hap4_Hap_bind > GO:nucleus ; GO:0005634
Pfam:PF10341 TPP1 > GO:telomeric DNA binding ; GO:0042162
Pfam:PF10341 TPP1 > GO:telomere maintenance via telomerase ; GO:0007004
Pfam:PF10341 TPP1 > GO:positive regulation of telomerase activity ; GO:0051973
Pfam:PF10341 TPP1 > GO:chromosome, telomeric region ; GO:0000781
Pfam:PF10341 TPP1 > GO:telomerase holoenzyme complex ; GO:0005697
Pfam:PF10371 EKR > GO:oxidoreductase activity, acting on the aldehyde or oxo group of donors ; GO:0016903
Pfam:PF10371 EKR > GO:oxidation-reduction process ; GO:0055114
Pfam:PF10384 Scm3 > GO:histone binding ; GO:0042393
Pfam:PF10384 Scm3 > GO:nucleus ; GO:0005634
Pfam:PF10385 RNA_pol_Rpb2_45 > GO:DNA-directed RNA polymerase activity ; GO:0003899
Pfam:PF10385 RNA_pol_Rpb2_45 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF10390 ELL > GO:transcription elongation from RNA polymerase II promoter ; GO:0006368
Pfam:PF10390 ELL > GO:transcription elongation factor complex ; GO:0008023
Pfam:PF10391 DNA_pol_lambd_f > GO:DNA binding ; GO:0003677
Pfam:PF10391 DNA_pol_lambd_f > GO:DNA polymerase activity ; GO:0034061
Pfam:PF10391 DNA_pol_lambd_f > GO:nucleus ; GO:0005634
Pfam:PF10392 COG5 > GO:intra-Golgi vesicle-mediated transport ; GO:0006891
Pfam:PF10392 COG5 > GO:Golgi transport complex ; GO:0017119
Pfam:PF10394 Hat1_N > GO:histone acetyltransferase activity ; GO:0004402
Pfam:PF10394 Hat1_N > GO:chromatin modification ; GO:0016568
Pfam:PF10399 UCR_Fe-S_N > GO:ubiquinol-cytochrome-c reductase activity ; GO:0008121
Pfam:PF10399 UCR_Fe-S_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF10401 IRF-3 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF10401 IRF-3 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF10403 BHD_1 > GO:DNA binding ; GO:0003677
Pfam:PF10404 BHD_2 > GO:DNA binding ; GO:0003677
Pfam:PF10405 BHD_3 > GO:DNA binding ; GO:0003677
Pfam:PF10408 Ufd2P_core > GO:ubiquitin-ubiquitin ligase activity ; GO:0034450
Pfam:PF10408 Ufd2P_core > GO:ubiquitin-dependent protein catabolic process ; GO:0006511
Pfam:PF10408 Ufd2P_core > GO:protein ubiquitination ; GO:0016567
Pfam:PF10408 Ufd2P_core > GO:ubiquitin ligase complex ; GO:0000151
Pfam:PF10410 DnaB_bind > GO:nucleotidyltransferase activity ; GO:0016779
Pfam:PF10414 CysG_dimeriser > GO:porphyrin-containing compound biosynthetic process ; GO:0006779
Pfam:PF10414 CysG_dimeriser > GO:oxidation-reduction process ; GO:0055114
Pfam:PF10415 FumaraseC_C > GO:lyase activity ; GO:0016829
Pfam:PF10415 FumaraseC_C > GO:tricarboxylic acid cycle ; GO:0006099
Pfam:PF10417 1-cysPrx_C > GO:peroxiredoxin activity ; GO:0051920
Pfam:PF10417 1-cysPrx_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF10425 SdrG_C_C > GO:cell adhesion ; GO:0007155
Pfam:PF10425 SdrG_C_C > GO:cell wall ; GO:0005618
Pfam:PF10426 zf-RAG1 > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF10426 zf-RAG1 > GO:acid-amino acid ligase activity ; GO:0016881
Pfam:PF10430 Ig_Tie2_1 > GO:transmembrane receptor protein tyrosine kinase activity ; GO:0004714
Pfam:PF10430 Ig_Tie2_1 > GO:ATP binding ; GO:0005524
Pfam:PF10430 Ig_Tie2_1 > GO:protein phosphorylation ; GO:0006468
Pfam:PF10430 Ig_Tie2_1 > GO:transmembrane receptor protein tyrosine kinase signaling pathway ; GO:0007169
Pfam:PF10430 Ig_Tie2_1 > GO:integral component of plasma membrane ; GO:0005887
Pfam:PF10432 bact-PGI_C > GO:glucose-6-phosphate isomerase activity ; GO:0004347
Pfam:PF10432 bact-PGI_C > GO:mannose-6-phosphate isomerase activity ; GO:0004476
Pfam:PF10432 bact-PGI_C > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF10439 Bacteriocin_IIc > GO:defense response to bacterium ; GO:0042742
Pfam:PF10440 WIYLD > GO:histone-lysine N-methyltransferase activity ; GO:0018024
Pfam:PF10447 EXOSC1 > GO:RNA binding ; GO:0003723
Pfam:PF10447 EXOSC1 > GO:exosome (RNase complex) ; GO:0000178
Pfam:PF10458 Val_tRNA-synt_C > GO:nucleotide binding ; GO:0000166
Pfam:PF10458 Val_tRNA-synt_C > GO:valine-tRNA ligase activity ; GO:0004832
Pfam:PF10458 Val_tRNA-synt_C > GO:ATP binding ; GO:0005524
Pfam:PF10458 Val_tRNA-synt_C > GO:valyl-tRNA aminoacylation ; GO:0006438
Pfam:PF10458 Val_tRNA-synt_C > GO:cytoplasm ; GO:0005737
Pfam:PF10461 Peptidase_S68 > GO:apoptotic process ; GO:0006915
Pfam:PF10461 Peptidase_S68 > GO:cellular response to DNA damage stimulus ; GO:0006974
Pfam:PF10462 Peptidase_M66 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF10468 Inhibitor_I68 > GO:metalloendopeptidase inhibitor activity ; GO:0008191
Pfam:PF10468 Inhibitor_I68 > GO:blood coagulation ; GO:0007596
Pfam:PF10468 Inhibitor_I68 > GO:negative regulation of endopeptidase activity ; GO:0010951
Pfam:PF10471 APC_CDC26 > GO:regulation of mitotic metaphase/anaphase transition ; GO:0030071
Pfam:PF10471 APC_CDC26 > GO:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process ; GO:0031145
Pfam:PF10471 APC_CDC26 > GO:anaphase-promoting complex ; GO:0005680
Pfam:PF10473 CENP-F_leu_zip > GO:transcription factor binding ; GO:0008134
Pfam:PF10473 CENP-F_leu_zip > GO:protein homodimerization activity ; GO:0042803
Pfam:PF10473 CENP-F_leu_zip > GO:dynein binding ; GO:0045502
Pfam:PF10483 Elong_Iki1 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF10484 MRP-S23 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF10484 MRP-S23 > GO:translation ; GO:0006412
Pfam:PF10484 MRP-S23 > GO:ribosome ; GO:0005840
Pfam:PF10486 PI3K_1B_p101 > GO:1-phosphatidylinositol-3-kinase regulator activity ; GO:0046935
Pfam:PF10486 PI3K_1B_p101 > GO:1-phosphatidylinositol-4-phosphate 3-kinase, class IB complex ; GO:0005944
Pfam:PF10501 Ribosomal_L50 > GO:mitochondrion ; GO:0005739
Pfam:PF10508 Proteasom_PSMB > GO:protein binding involved in protein folding ; GO:0044183
Pfam:PF10510 PIG-S > GO:attachment of GPI anchor to protein ; GO:0016255
Pfam:PF10510 PIG-S > GO:GPI-anchor transamidase complex ; GO:0042765
Pfam:PF10538 ITAM_Cys-rich > GO:signal transduction ; GO:0007165
Pfam:PF10541 KASH > GO:actin binding ; GO:0003779
Pfam:PF10541 KASH > GO:integral component of membrane ; GO:0016021
Pfam:PF10550 Toxin_36 > GO:pathogenesis ; GO:0009405
Pfam:PF10550 Toxin_36 > GO:other organism postsynaptic membrane ; GO:0035792
Pfam:PF10557 Cullin_Nedd8 > GO:ubiquitin protein ligase binding ; GO:0031625
Pfam:PF10557 Cullin_Nedd8 > GO:ubiquitin-dependent protein catabolic process ; GO:0006511
Pfam:PF10557 Cullin_Nedd8 > GO:cullin-RING ubiquitin ligase complex ; GO:0031461
Pfam:PF10568 Tom37 > GO:protein targeting to mitochondrion ; GO:0006626
Pfam:PF10568 Tom37 > GO:mitochondrial outer membrane ; GO:0005741
Pfam:PF10576 EndIII_4Fe-2S > GO:4 iron, 4 sulfur cluster binding ; GO:0051539
Pfam:PF10579 Rapsyn_N > GO:zinc ion binding ; GO:0008270
Pfam:PF10579 Rapsyn_N > GO:acetylcholine receptor binding ; GO:0033130
Pfam:PF10579 Rapsyn_N > GO:synaptic transmission ; GO:0007268
Pfam:PF10579 Rapsyn_N > GO:cytoskeleton ; GO:0005856
Pfam:PF10579 Rapsyn_N > GO:cell junction ; GO:0030054
Pfam:PF10579 Rapsyn_N > GO:postsynaptic membrane ; GO:0045211
Pfam:PF10584 Proteasome_A_N > GO:endopeptidase activity ; GO:0004175
Pfam:PF10584 Proteasome_A_N > GO:ubiquitin-dependent protein catabolic process ; GO:0006511
Pfam:PF10584 Proteasome_A_N > GO:proteasome core complex, alpha-subunit complex ; GO:0019773
Pfam:PF10588 NADH-G_4Fe-4S_3 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF10588 NADH-G_4Fe-4S_3 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF10589 NADH_4Fe-4S > GO:oxidation-reduction process ; GO:0055114
Pfam:PF10590 PNPOx_C > GO:oxidoreductase activity, acting on the CH-NH2 group of donors ; GO:0016638
Pfam:PF10590 PNPOx_C > GO:oxidation-reduction process ; GO:0055114
Pfam:PF10591 SPARC_Ca_bdg > GO:calcium ion binding ; GO:0005509
Pfam:PF10591 SPARC_Ca_bdg > GO:signal transduction ; GO:0007165
Pfam:PF10591 SPARC_Ca_bdg > GO:proteinaceous extracellular matrix ; GO:0005578
Pfam:PF10596 U6-snRNA_bdg > GO:U6 snRNA binding ; GO:0017070
Pfam:PF10597 U5_2-snRNA_bdg > GO:U5 snRNA binding ; GO:0030623
Pfam:PF10598 RRM_4 > GO:RNA binding ; GO:0003723
Pfam:PF10605 3HBOH > GO:hydroxybutyrate-dimer hydrolase activity ; GO:0047989
Pfam:PF10605 3HBOH > GO:butyrate metabolic process ; GO:0019605
Pfam:PF10605 3HBOH > GO:extracellular space ; GO:0005615
Pfam:PF10613 Lig_chan-Glu_bd > GO:ionotropic glutamate receptor activity ; GO:0004970
Pfam:PF10613 Lig_chan-Glu_bd > GO:extracellular-glutamate-gated ion channel activity ; GO:0005234
Pfam:PF10613 Lig_chan-Glu_bd > GO:membrane ; GO:0016020
Pfam:PF10620 MdcG > GO:nucleotidyltransferase activity ; GO:0016779
Pfam:PF10637 Ofd1_CTDD > GO:iron ion binding ; GO:0005506
Pfam:PF10637 Ofd1_CTDD > GO:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors ; GO:0016706
Pfam:PF10637 Ofd1_CTDD > GO:L-ascorbic acid binding ; GO:0031418
Pfam:PF10637 Ofd1_CTDD > GO:oxidation-reduction process ; GO:0055114
Pfam:PF10640 Pox_ATPase-GT > GO:mRNA guanylyltransferase activity ; GO:0004484
Pfam:PF10640 Pox_ATPase-GT > GO:polynucleotide 5'-phosphatase activity ; GO:0004651
Pfam:PF10660 MitoNEET_N > GO:2 iron, 2 sulfur cluster binding ; GO:0051537
Pfam:PF10660 MitoNEET_N > GO:intracellular membrane-bounded organelle ; GO:0043231
Pfam:PF10662 PduV-EutP > GO:ATP binding ; GO:0005524
Pfam:PF10662 PduV-EutP > GO:cellular biogenic amine metabolic process ; GO:0006576
Pfam:PF10664 NdhM > GO:oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; GO:0016655
Pfam:PF10664 NdhM > GO:oxidation-reduction process ; GO:0055114
Pfam:PF10672 Methyltrans_SAM > GO:methyltransferase activity ; GO:0008168
Pfam:PF10716 NdhL > GO:oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; GO:0016655
Pfam:PF10716 NdhL > GO:oxidation-reduction process ; GO:0055114
Pfam:PF10717 ODV-E18 > GO:viral envelope ; GO:0019031
Pfam:PF10729 CedA > GO:DNA binding ; GO:0003677
Pfam:PF10729 CedA > GO:cell division ; GO:0051301
Pfam:PF10741 T2SM_b > GO:extracellular transport ; GO:0006858
Pfam:PF10744 Med1 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF10744 Med1 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF10744 Med1 > GO:mediator complex ; GO:0016592
Pfam:PF10755 DUF2585 > GO:plasma membrane ; GO:0005886
Pfam:PF10778 DehI > GO:hydrolase activity, acting on acid halide bonds, in C-halide compounds ; GO:0019120
Pfam:PF10796 Anti-adapt_IraP > GO:cytoplasm ; GO:0005737
Pfam:PF10798 YmgB > GO:biofilm formation ; GO:0042710
Pfam:PF10798 YmgB > GO:cellular response to acid ; GO:0071229
Pfam:PF10808 DUF2542 > GO:integral component of membrane ; GO:0016021
Pfam:PF10890 DUF2741 > GO:electron transport chain ; GO:0022900
Pfam:PF10890 DUF2741 > GO:mitochondrial inner membrane ; GO:0005743
Pfam:PF10890 DUF2741 > GO:respiratory chain ; GO:0070469
Pfam:PF10954 DUF2755 > GO:integral component of membrane ; GO:0016021
Pfam:PF11023 DUF2614 > GO:integral component of plasma membrane ; GO:0005887
Pfam:PF11045 YbjM > GO:integral component of membrane ; GO:0016021
Pfam:PF11047 SopD > GO:pathogenesis ; GO:0009405
Pfam:PF11047 SopD > GO:host cell membrane ; GO:0033644
Pfam:PF11051 Mannosyl_trans3 > GO:protein glycosylation ; GO:0006486
Pfam:PF11057 Cortexin > GO:intrinsic component of membrane ; GO:0031224
Pfam:PF11093 Mitochondr_Som1 > GO:mitochondrial inner membrane peptidase complex ; GO:0042720
Pfam:PF11095 Gemin7 > GO:SMN complex ; GO:0032797
Pfam:PF11109 RFamide_26RFa > GO:orexigenic neuropeptide QRFP receptor binding ; GO:0031854
Pfam:PF11112 PyocinActivator > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF11264 ThylakoidFormat > GO:thylakoid membrane organization ; GO:0010027
Pfam:PF11264 ThylakoidFormat > GO:photosynthesis ; GO:0015979
Pfam:PF11264 ThylakoidFormat > GO:photosystem II ; GO:0009523
Pfam:PF11266 DUF3066 > GO:aldehyde decarbonylase activity ; GO:0071771
Pfam:PF11365 DUF3166 > GO:regulation of autophagy ; GO:0010506
Pfam:PF11365 DUF3166 > GO:extracellular space ; GO:0005615
Pfam:PF11380 DUF3184 > GO:transferase activity, transferring phosphorus-containing groups ; GO:0016772
Pfam:PF11389 Porin_OmpL1 > GO:porin activity ; GO:0015288
Pfam:PF11389 Porin_OmpL1 > GO:transport ; GO:0006810
Pfam:PF11389 Porin_OmpL1 > GO:plasma membrane ; GO:0005886
Pfam:PF11411 DNA_ligase_IV > GO:DNA ligase (ATP) activity ; GO:0003910
Pfam:PF11421 Synthase_beta > GO:ATP binding ; GO:0005524
Pfam:PF11421 Synthase_beta > GO:ATPase activity ; GO:0016887
Pfam:PF11421 Synthase_beta > GO:ATP catabolic process ; GO:0006200
Pfam:PF11421 Synthase_beta > GO:ATP biosynthetic process ; GO:0006754
Pfam:PF11421 Synthase_beta > GO:mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) ; GO:0000275
Pfam:PF11427 HTH_Tnp_Tc3_1 > GO:DNA binding ; GO:0003677
Pfam:PF11429 Colicin_D > GO:ribonuclease activity ; GO:0004540
Pfam:PF11435 She2p > GO:RNA binding ; GO:0003723
Pfam:PF11501 Nsp1 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF11501 Nsp1 > GO:omega peptidase activity ; GO:0008242
Pfam:PF11501 Nsp1 > GO:transferase activity ; GO:0016740
Pfam:PF11501 Nsp1 > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF11501 Nsp1 > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF11504 Colicin_Ia > GO:cytolysis ; GO:0019835
Pfam:PF11504 Colicin_Ia > GO:defense response to Gram-negative bacterium ; GO:0050829
Pfam:PF11504 Colicin_Ia > GO:integral component of membrane ; GO:0016021
Pfam:PF11520 Cren7 > GO:double-stranded DNA binding ; GO:0003690
Pfam:PF11520 Cren7 > GO:cytoplasm ; GO:0005737
Pfam:PF11522 Pik1 > GO:phosphotransferase activity, alcohol group as acceptor ; GO:0016773
Pfam:PF11525 CopK > GO:metal ion binding ; GO:0046872
Pfam:PF11531 CARM1 > GO:pathogenesis ; GO:0009405
Pfam:PF11538 Snurportin1 > GO:protein binding ; GO:0005515
Pfam:PF11540 Dynein_IC2 > GO:microtubule-based movement ; GO:0007018
Pfam:PF11540 Dynein_IC2 > GO:cytoplasmic dynein complex ; GO:0005868
Pfam:PF11545 HemeBinding_Shp > GO:heme binding ; GO:0020037
Pfam:PF11547 E3_UbLigase_EDD > GO:ubiquitin binding ; GO:0043130
Pfam:PF11568 Med29 > GO:mediator complex ; GO:0016592
Pfam:PF11575 FhuF_C > GO:2 iron, 2 sulfur cluster binding ; GO:0051537
Pfam:PF11590 DNAPolymera_Pol > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF11590 DNAPolymera_Pol > GO:RNA-DNA hybrid ribonuclease activity ; GO:0004523
Pfam:PF11593 Med3 > GO:RNA polymerase II transcription cofactor activity ; GO:0001104
Pfam:PF11593 Med3 > GO:regulation of transcription from RNA polymerase II promoter ; GO:0006357
Pfam:PF11593 Med3 > GO:mediator complex ; GO:0016592
Pfam:PF11605 Vps36_ESCRT-II > GO:phosphatidylinositol-3-phosphate binding ; GO:0032266
Pfam:PF11605 Vps36_ESCRT-II > GO:ubiquitin binding ; GO:0043130
Pfam:PF11606 AlcCBM31 > GO:xylan endo-1,3-beta-xylosidase activity ; GO:0033905
Pfam:PF11612 T2SJ > GO:protein transporter activity ; GO:0008565
Pfam:PF11612 T2SJ > GO:protein secretion by the type II secretion system ; GO:0015628
Pfam:PF11612 T2SJ > GO:type II protein secretion system complex ; GO:0015627
Pfam:PF11613 UCN2 > GO:corticotropin-releasing hormone receptor 2 binding ; GO:0051431
Pfam:PF11613 UCN2 > GO:response to stress ; GO:0006950
Pfam:PF11613 UCN2 > GO:digestion ; GO:0007586
Pfam:PF11613 UCN2 > GO:extracellular space ; GO:0005615
Pfam:PF11616 EZH2_WD-Binding > GO:histone-lysine N-methyltransferase activity ; GO:0018024
Pfam:PF11629 Mst1_SARAH > GO:protein serine/threonine kinase activity ; GO:0004674
Pfam:PF11640 TAN > GO:protein serine/threonine kinase activity ; GO:0004674
Pfam:PF11648 RIG-I_C-RD > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF11654 DUF2665 > GO:protein secretion ; GO:0009306
Pfam:PF11657 Activator-TraM > GO:quorum sensing ; GO:0009372
Pfam:PF11698 V-ATPase_H_C > GO:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances ; GO:0016820
Pfam:PF11698 V-ATPase_H_C > GO:ATP hydrolysis coupled proton transport ; GO:0015991
Pfam:PF11698 V-ATPase_H_C > GO:vacuolar proton-transporting V-type ATPase, V1 domain ; GO:0000221
Pfam:PF11716 MDMPI_N > GO:metal ion binding ; GO:0046872
Pfam:PF11722 zf-TRM13_CCCH > GO:methyltransferase activity ; GO:0008168
Pfam:PF11734 TilS_C > GO:nucleotide binding ; GO:0000166
Pfam:PF11734 TilS_C > GO:ATP binding ; GO:0005524
Pfam:PF11734 TilS_C > GO:ligase activity, forming carbon-nitrogen bonds ; GO:0016879
Pfam:PF11734 TilS_C > GO:tRNA processing ; GO:0008033
Pfam:PF11734 TilS_C > GO:cytoplasm ; GO:0005737
Pfam:PF11744 ALMT > GO:malate transport ; GO:0015743
Pfam:PF11770 GAPT > GO:integral component of membrane ; GO:0016021
Pfam:PF11791 Aconitase_B_N > GO:aconitate hydratase activity ; GO:0003994
Pfam:PF11791 Aconitase_B_N > GO:tricarboxylic acid cycle ; GO:0006099
Pfam:PF11799 IMS_C > GO:damaged DNA binding ; GO:0003684
Pfam:PF11799 IMS_C > GO:DNA repair ; GO:0006281
Pfam:PF11801 Tom37_C > GO:protein targeting to mitochondrion ; GO:0006626
Pfam:PF11801 Tom37_C > GO:mitochondrial outer membrane ; GO:0005741
Pfam:PF11802 CENP-K > GO:nucleus ; GO:0005634
Pfam:PF11803 UXS1_N > GO:UDP-glucuronate decarboxylase activity ; GO:0048040
Pfam:PF11806 DUF3327 > GO:iron ion binding ; GO:0005506
Pfam:PF11806 DUF3327 > GO:enterochelin esterase activity ; GO:0008849
Pfam:PF11806 DUF3327 > GO:iron ion transport ; GO:0006826
Pfam:PF11806 DUF3327 > GO:cytoplasm ; GO:0005737
Pfam:PF11808 DUF3329 > GO:protein histidine kinase activity ; GO:0004673
Pfam:PF11837 DUF3357 > GO:beta-fructofuranosidase activity ; GO:0004564
Pfam:PF11837 DUF3357 > GO:sucrose alpha-glucosidase activity ; GO:0004575
Pfam:PF11851 DUF3371 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF11857 DUF3377 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF11883 DUF3403 > GO:protein serine/threonine kinase activity ; GO:0004674
Pfam:PF11889 DUF3409 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF11889 DUF3409 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF11889 DUF3409 > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF11889 DUF3409 > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF11889 DUF3409 > GO:nucleoside-triphosphatase activity ; GO:0017111
Pfam:PF11889 DUF3409 > GO:serine-type exopeptidase activity ; GO:0070008
Pfam:PF11890 DUF3410 > GO:protein dimerization activity ; GO:0046983
Pfam:PF11894 DUF3414 > GO:nuclear pore ; GO:0005643
Pfam:PF11896 DUF3416 > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF11909 NdhN > GO:oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; GO:0016655
Pfam:PF11909 NdhN > GO:oxidation-reduction process ; GO:0055114
Pfam:PF11909 NdhN > GO:membrane ; GO:0016020
Pfam:PF11910 NdhO > GO:oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; GO:0016655
Pfam:PF11910 NdhO > GO:oxidation-reduction process ; GO:0055114
Pfam:PF11910 NdhO > GO:plasma membrane ; GO:0005886
Pfam:PF11956 KCNQC3-Ank-G_bd > GO:potassium channel activity ; GO:0005267
Pfam:PF11956 KCNQC3-Ank-G_bd > GO:membrane ; GO:0016020
Pfam:PF11960 DUF3474 > GO:oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water ; GO:0016717
Pfam:PF11960 DUF3474 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF11965 DUF3479 > GO:magnesium chelatase activity ; GO:0016851
Pfam:PF11968 DUF3321 > GO:rRNA (adenine) methyltransferase activity ; GO:0016433
Pfam:PF11973 NQRA_SLBB > GO:oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ; GO:0016655
Pfam:PF11973 NQRA_SLBB > GO:oxidation-reduction process ; GO:0055114
Pfam:PF11975 Glyco_hydro_4C > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF11991 Trp_DMAT > GO:tryptophan dimethylallyltransferase activity ; GO:0050364
Pfam:PF11991 Trp_DMAT > GO:alkaloid metabolic process ; GO:0009820
Pfam:PF12009 Telomerase_RBD > GO:RNA-directed DNA polymerase activity ; GO:0003964
Pfam:PF12011 DUF3503 > GO:nucleoside-triphosphatase activity ; GO:0017111
Pfam:PF12019 GspH > GO:protein transporter activity ; GO:0008565
Pfam:PF12019 GspH > GO:protein secretion by the type II secretion system ; GO:0015628
Pfam:PF12019 GspH > GO:type II protein secretion system complex ; GO:0015627
Pfam:PF12025 Phage_C > GO:viral DNA genome packaging ; GO:0019073
Pfam:PF12052 VGCC_beta4Aa_N > GO:voltage-gated calcium channel activity ; GO:0005245
Pfam:PF12052 VGCC_beta4Aa_N > GO:calcium ion transmembrane transport ; GO:0070588
Pfam:PF12052 VGCC_beta4Aa_N > GO:voltage-gated calcium channel complex ; GO:0005891
Pfam:PF12062 HSNSD > GO:[heparan sulfate]-glucosamine N-sulfotransferase activity ; GO:0015016
Pfam:PF12062 HSNSD > GO:hydrolase activity ; GO:0016787
Pfam:PF12063 DUF3543 > GO:protein serine/threonine kinase activity ; GO:0004674
Pfam:PF12070 DUF3550 > GO:transcription corepressor activity ; GO:0003714
Pfam:PF12070 DUF3550 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF12090 Spt20 > GO:transcription cofactor activity ; GO:0003712
Pfam:PF12090 Spt20 > GO:SAGA complex ; GO:0000124
Pfam:PF12105 SpoU_methylas_C > GO:tRNA (guanosine-2'-O-)-methyltransferase activity ; GO:0009020
Pfam:PF12106 Colicin_C > GO:ribonuclease activity ; GO:0004540
Pfam:PF12109 CXCR4_N > GO:cytokine binding ; GO:0019955
Pfam:PF12122 DUF3582 > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF12122 DUF3582 > GO:integral component of membrane ; GO:0016021
Pfam:PF12124 Nsp3_PL2pro > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF12124 Nsp3_PL2pro > GO:omega peptidase activity ; GO:0008242
Pfam:PF12124 Nsp3_PL2pro > GO:transferase activity ; GO:0016740
Pfam:PF12124 Nsp3_PL2pro > GO:hydrolase activity, acting on ester bonds ; GO:0016788
Pfam:PF12124 Nsp3_PL2pro > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF12125 Beta-TrCP_D > GO:protein dimerization activity ; GO:0046983
Pfam:PF12131 DUF3586 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF12137 RapA_C > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF12142 PPO1_DWL > GO:catechol oxidase activity ; GO:0004097
Pfam:PF12142 PPO1_DWL > GO:oxidation-reduction process ; GO:0055114
Pfam:PF12143 PPO1_KFDV > GO:catechol oxidase activity ; GO:0004097
Pfam:PF12143 PPO1_KFDV > GO:oxidation-reduction process ; GO:0055114
Pfam:PF12144 Med12-PQL > GO:beta-catenin binding ; GO:0008013
Pfam:PF12144 Med12-PQL > GO:mediator complex ; GO:0016592
Pfam:PF12153 CAP18_C > GO:defense response to bacterium ; GO:0042742
Pfam:PF12162 STAT1_TAZ2bind > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF12165 DUF3594 > GO:histone binding ; GO:0042393
Pfam:PF12165 DUF3594 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF12166 DUF3595 > GO:mechanically-gated ion channel activity ; GO:0008381
Pfam:PF12166 DUF3595 > GO:integral component of membrane ; GO:0016021
Pfam:PF12169 DNA_pol3_gamma3 > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF12170 DNA_pol3_tau_5 > GO:DNA-directed DNA polymerase activity ; GO:0003887
Pfam:PF12179 IKKbetaNEMObind > GO:IkappaB kinase activity ; GO:0008384
Pfam:PF12189 VirE1 > GO:protein binding ; GO:0005515
Pfam:PF12189 VirE1 > GO:protein folding ; GO:0006457
Pfam:PF12189 VirE1 > GO:pathogenesis ; GO:0009405
Pfam:PF12199 efb-c > GO:complement binding ; GO:0001848
Pfam:PF12199 efb-c > GO:extracellular space ; GO:0005615
Pfam:PF12201 bcl-2I13 > GO:apoptotic process ; GO:0006915
Pfam:PF12202 OSR1_C > GO:protein serine/threonine kinase activity ; GO:0004674
Pfam:PF12202 OSR1_C > GO:ATP binding ; GO:0005524
Pfam:PF12235 FXR1P_C > GO:RNA binding ; GO:0003723
Pfam:PF12242 Eno-Rase_NADH_b > GO:oxidoreductase activity ; GO:0016491
Pfam:PF12242 Eno-Rase_NADH_b > GO:oxidation-reduction process ; GO:0055114
Pfam:PF12249 AftA_C > GO:transferase activity, transferring glycosyl groups ; GO:0016757
Pfam:PF12249 AftA_C > GO:cell wall macromolecule biosynthetic process ; GO:0044038
Pfam:PF12249 AftA_C > GO:plasma membrane ; GO:0005886
Pfam:PF12249 AftA_C > GO:integral component of membrane ; GO:0016021
Pfam:PF12250 AftA_N > GO:transferase activity, transferring glycosyl groups ; GO:0016757
Pfam:PF12250 AftA_N > GO:cell wall macromolecule biosynthetic process ; GO:0044038
Pfam:PF12250 AftA_N > GO:plasma membrane ; GO:0005886
Pfam:PF12250 AftA_N > GO:integral component of membrane ; GO:0016021
Pfam:PF12258 Microcephalin > GO:cerebral cortex development ; GO:0021987
Pfam:PF12270 Cyt_c_ox_IV > GO:cytochrome-c oxidase activity ; GO:0004129
Pfam:PF12270 Cyt_c_ox_IV > GO:oxidation-reduction process ; GO:0055114
Pfam:PF12270 Cyt_c_ox_IV > GO:integral component of membrane ; GO:0016021
Pfam:PF12285 DUF3621 > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF12285 DUF3621 > GO:serine-type exopeptidase activity ; GO:0070008
Pfam:PF12289 Rotavirus_VP1 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF12297 EVC2_like > GO:smoothened signaling pathway ; GO:0007224
Pfam:PF12300 DUF3628 > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF12317 IFT46_B_C > GO:intraciliary transport ; GO:0042073
Pfam:PF12326 EOS1 > GO:cellular response to oxidative stress ; GO:0034599
Pfam:PF12326 EOS1 > GO:endoplasmic reticulum membrane ; GO:0005789
Pfam:PF12343 DEADboxA > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF12356 DUF3643 > GO:ubiquitin-protein transferase activity ; GO:0004842
Pfam:PF12356 DUF3643 > GO:apoptotic process ; GO:0006915
Pfam:PF12356 DUF3643 > GO:regulation of cytokinesis ; GO:0032465
Pfam:PF12361 DBP > GO:membrane ; GO:0016020
Pfam:PF12387 Peptidase_C74 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF12387 Peptidase_C74 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF12387 Peptidase_C74 > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF12387 Peptidase_C74 > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF12387 Peptidase_C74 > GO:nucleoside-triphosphatase activity ; GO:0017111
Pfam:PF12387 Peptidase_C74 > GO:serine-type exopeptidase activity ; GO:0070008
Pfam:PF12398 DUF3660 > GO:protein serine/threonine kinase activity ; GO:0004674
Pfam:PF12404 DUF3663 > GO:aminopeptidase activity ; GO:0004177
Pfam:PF12404 DUF3663 > GO:metalloexopeptidase activity ; GO:0008235
Pfam:PF12404 DUF3663 > GO:manganese ion binding ; GO:0030145
Pfam:PF12404 DUF3663 > GO:proteolysis ; GO:0006508
Pfam:PF12404 DUF3663 > GO:cytoplasm ; GO:0005737
Pfam:PF12409 P5-ATPase > GO:ATPase activity ; GO:0016887
Pfam:PF12409 P5-ATPase > GO:cation transport ; GO:0006812
Pfam:PF12409 P5-ATPase > GO:integral component of membrane ; GO:0016021
Pfam:PF12422 Condensin2nSMC > GO:nucleus ; GO:0005634
Pfam:PF12424 ATP_Ca_trans_C > GO:calcium-transporting ATPase activity ; GO:0005388
Pfam:PF12437 GSIII_N > GO:glutamate-ammonia ligase activity ; GO:0004356
Pfam:PF12464 Mac > GO:acetyltransferase activity ; GO:0016407
Pfam:PF12467 CMV_1a > GO:methyltransferase activity ; GO:0008168
Pfam:PF12467 CMV_1a > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF12470 SUFU_C > GO:protein binding ; GO:0005515
Pfam:PF12474 PKK > GO:protein serine/threonine kinase activity ; GO:0004674
Pfam:PF12483 GIDE > GO:ubiquitin-protein transferase activity ; GO:0004842
Pfam:PF12483 GIDE > GO:mitochondrion organization ; GO:0007005
Pfam:PF12501 DUF3708 > GO:phosphate ion transport ; GO:0006817
Pfam:PF12503 CMV_1a_C > GO:methyltransferase activity ; GO:0008168
Pfam:PF12503 CMV_1a_C > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF12513 SUV3_C > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF12515 CaATP_NAI > GO:calmodulin binding ; GO:0005516
Pfam:PF12529 Xylo_C > GO:protein xylosyltransferase activity ; GO:0030158
Pfam:PF12529 Xylo_C > GO:glycosaminoglycan biosynthetic process ; GO:0006024
Pfam:PF12539 Csm1 > GO:protein binding ; GO:0005515
Pfam:PF12549 TOH_N > GO:tyrosine 3-monooxygenase activity ; GO:0004511
Pfam:PF12549 TOH_N > GO:oxidation-reduction process ; GO:0055114
Pfam:PF12558 DUF3744 > GO:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances ; GO:0016820
Pfam:PF12567 CD45 > GO:protein tyrosine phosphatase activity ; GO:0004725
Pfam:PF12567 CD45 > GO:T cell receptor signaling pathway ; GO:0050852
Pfam:PF12581 DUF3756 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF12581 DUF3756 > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF12581 DUF3756 > GO:serine-type endopeptidase activity ; GO:0004252
Pfam:PF12581 DUF3756 > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF12581 DUF3756 > GO:serine-type exopeptidase activity ; GO:0070008
Pfam:PF12590 Acyl-thio_N > GO:thiolester hydrolase activity ; GO:0016790
Pfam:PF12592 DUF3763 > GO:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances ; GO:0016820
Pfam:PF12601 Rubi_NSP_C > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF12601 Rubi_NSP_C > GO:cysteine-type endopeptidase activity ; GO:0004197
Pfam:PF12601 Rubi_NSP_C > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF12601 Rubi_NSP_C > GO:nucleoside-triphosphatase activity ; GO:0017111
Pfam:PF12603 DUF3770 > GO:RNA-directed RNA polymerase activity ; GO:0003968
Pfam:PF12605 CK1gamma_C > GO:protein serine/threonine kinase activity ; GO:0004674
Pfam:PF12619 MCM2_N > GO:DNA binding ; GO:0003677
Pfam:PF12619 MCM2_N > GO:DNA helicase activity ; GO:0003678
Pfam:PF12619 MCM2_N > GO:ATP binding ; GO:0005524
Pfam:PF12619 MCM2_N > GO:DNA replication initiation ; GO:0006270
Pfam:PF12619 MCM2_N > GO:nucleus ; GO:0005634
Pfam:PF12619 MCM2_N > GO:MCM complex ; GO:0042555
Pfam:PF12632 Vezatin > GO:myosin binding ; GO:0017022
Pfam:PF12634 Inp1 > GO:peroxisome inheritance ; GO:0045033
Pfam:PF12634 Inp1 > GO:extrinsic component of intraperoxisomal membrane ; GO:0005780
Pfam:PF12639 Colicin-DNase > GO:endonuclease activity ; GO:0004519
Pfam:PF12658 Ten1 > GO:single-stranded telomeric DNA binding ; GO:0043047
Pfam:PF12658 Ten1 > GO:telomere maintenance via telomere lengthening ; GO:0010833
Pfam:PF12658 Ten1 > GO:Stn1-Ten1 complex ; GO:0070188
Pfam:PF12678 zf-rbx1 > GO:zinc ion binding ; GO:0008270
Pfam:PF12689 Acid_PPase > GO:phosphatase activity ; GO:0016791
Pfam:PF12740 Chlorophyllase2 > GO:chlorophyllase activity ; GO:0047746
Pfam:PF12740 Chlorophyllase2 > GO:chlorophyll catabolic process ; GO:0015996
Pfam:PF12753 Nro1 > GO:protein binding ; GO:0005515
Pfam:PF12753 Nro1 > GO:nucleus ; GO:0005634
Pfam:PF12761 End3 > GO:endocytosis ; GO:0006897
Pfam:PF12761 End3 > GO:actin filament organization ; GO:0007015
Pfam:PF12766 Pyridox_oxase_2 > GO:FMN binding ; GO:0010181
Pfam:PF12767 SAGA-Tad1 > GO:SAGA-type complex ; GO:0070461
Pfam:PF12797 Fer4_2 > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF12798 Fer4_3 > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF12800 Fer4_4 > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF12801 Fer4_5 > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF12814 Mcp5_PH > GO:protein binding ; GO:0005515
Pfam:PF12814 Mcp5_PH > GO:phospholipid binding ; GO:0005543
Pfam:PF12814 Mcp5_PH > GO:cortical protein anchoring ; GO:0032065
Pfam:PF12814 Mcp5_PH > GO:cell cortex ; GO:0005938
Pfam:PF12822 DUF3816 > GO:transporter activity ; GO:0005215
Pfam:PF12833 HTH_18 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF12833 HTH_18 > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF12833 HTH_18 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF12837 Fer4_6 > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF12838 Fer4_7 > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF12859 Apc1 > GO:anaphase-promoting complex ; GO:0005680
Pfam:PF12861 zf-Apc11 > GO:ubiquitin-protein transferase activity ; GO:0004842
Pfam:PF12861 zf-Apc11 > GO:anaphase-promoting complex ; GO:0005680
Pfam:PF12884 TORC_N > GO:cAMP response element binding protein binding ; GO:0008140
Pfam:PF12884 TORC_N > GO:protein homotetramerization ; GO:0051289
Pfam:PF12899 Glyco_hydro_100 > GO:glycopeptide alpha-N-acetylgalactosaminidase activity ; GO:0033926
Pfam:PF12902 Ferritin-like > GO:antibiotic biosynthetic process ; GO:0017000
Pfam:PF12905 Glyco_hydro_101 > GO:glycopeptide alpha-N-acetylgalactosaminidase activity ; GO:0033926
Pfam:PF12906 RINGv > GO:zinc ion binding ; GO:0008270
Pfam:PF12919 TcdA_TcdB > GO:transferase activity, transferring glycosyl groups ; GO:0016757
Pfam:PF12920 TcdA_TcdB_pore > GO:pathogenesis ; GO:0009405
Pfam:PF12924 APP_Cu_bd > GO:transition metal ion binding ; GO:0046914
Pfam:PF12937 F-box-like > GO:protein binding ; GO:0005515
Pfam:PF12940 RAG1 > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF12940 RAG1 > GO:V(D)J recombination ; GO:0033151
Pfam:PF13000 Acatn > GO:acetyl-CoA transporter activity ; GO:0008521
Pfam:PF13000 Acatn > GO:integral component of membrane ; GO:0016021
Pfam:PF13008 zf-Paramyx-P > GO:metal ion binding ; GO:0046872
Pfam:PF13013 F-box-like_2 > GO:protein binding ; GO:0005515
Pfam:PF13014 KH_3 > GO:RNA binding ; GO:0003723
Pfam:PF13085 Fer2_3 > GO:electron carrier activity ; GO:0009055
Pfam:PF13085 Fer2_3 > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF13096 CENP-P > GO:centromere-specific nucleosome assembly ; GO:0034080
Pfam:PF13096 CENP-P > GO:chromosome, centromeric region ; GO:0000775
Pfam:PF13103 TonB_2 > GO:transport ; GO:0006810
Pfam:PF13145 Rotamase_2 > GO:isomerase activity ; GO:0016853
Pfam:PF13174 TPR_6 > GO:protein binding ; GO:0005515
Pfam:PF13176 TPR_7 > GO:protein binding ; GO:0005515
Pfam:PF13180 PDZ_2 > GO:protein binding ; GO:0005515
Pfam:PF13181 TPR_8 > GO:protein binding ; GO:0005515
Pfam:PF13183 Fer4_8 > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF13184 KH_5 > GO:RNA binding ; GO:0003723
Pfam:PF13185 GAF_2 > GO:protein binding ; GO:0005515
Pfam:PF13187 Fer4_9 > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF13188 PAS_8 > GO:signal transducer activity ; GO:0004871
Pfam:PF13188 PAS_8 > GO:signal transduction ; GO:0007165
Pfam:PF13202 EF-hand_5 > GO:calcium ion binding ; GO:0005509
Pfam:PF13237 Fer4_10 > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF13241 NAD_binding_7 > GO:precorrin-2 dehydrogenase activity ; GO:0043115
Pfam:PF13241 NAD_binding_7 > GO:porphyrin-containing compound biosynthetic process ; GO:0006779
Pfam:PF13241 NAD_binding_7 > GO:siroheme biosynthetic process ; GO:0019354
Pfam:PF13241 NAD_binding_7 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF13247 Fer4_11 > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF13292 DXP_synthase_N > GO:1-deoxy-D-xylulose-5-phosphate synthase activity ; GO:0008661
Pfam:PF13292 DXP_synthase_N > GO:terpenoid biosynthetic process ; GO:0016114
Pfam:PF13302 Acetyltransf_3 > GO:N-acetyltransferase activity ; GO:0008080
Pfam:PF13303 PTS_EIIC_2 > GO:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity ; GO:0008982
Pfam:PF13303 PTS_EIIC_2 > GO:phosphoenolpyruvate-dependent sugar phosphotransferase system ; GO:0009401
Pfam:PF13303 PTS_EIIC_2 > GO:membrane ; GO:0016020
Pfam:PF13304 AAA_21 > GO:ATP binding ; GO:0005524
Pfam:PF13307 Helicase_C_2 > GO:nucleic acid binding ; GO:0003676
Pfam:PF13307 Helicase_C_2 > GO:ATP binding ; GO:0005524
Pfam:PF13307 Helicase_C_2 > GO:ATP-dependent helicase activity ; GO:0008026
Pfam:PF13307 Helicase_C_2 > GO:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides ; GO:0016818
Pfam:PF13307 Helicase_C_2 > GO:nucleobase-containing compound metabolic process ; GO:0006139
Pfam:PF13326 PSII_Pbs27 > GO:photosystem II assembly ; GO:0010207
Pfam:PF13361 UvrD_C > GO:ATP binding ; GO:0005524
Pfam:PF13361 UvrD_C > GO:hydrolase activity ; GO:0016787
Pfam:PF13367 PrsW-protease > GO:peptidase activity ; GO:0008233
Pfam:PF13380 CoA_binding_2 > GO:cofactor binding ; GO:0048037
Pfam:PF13386 DsbD_2 > GO:cytochrome complex assembly ; GO:0017004
Pfam:PF13386 DsbD_2 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF13386 DsbD_2 > GO:membrane ; GO:0016020
Pfam:PF13397 DUF4109 > GO:bacterial-type RNA polymerase core enzyme binding ; GO:0001000
Pfam:PF13397 DUF4109 > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF13404 HTH_AsnC-type > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF13404 HTH_AsnC-type > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF13405 EF-hand_6 > GO:calcium ion binding ; GO:0005509
Pfam:PF13409 GST_N_2 > GO:protein binding ; GO:0005515
Pfam:PF13411 MerR_1 > GO:DNA binding ; GO:0003677
Pfam:PF13411 MerR_1 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF13413 HTH_25 > GO:DNA binding ; GO:0003677
Pfam:PF13417 GST_N_3 > GO:protein binding ; GO:0005515
Pfam:PF13426 PAS_9 > GO:signal transducer activity ; GO:0004871
Pfam:PF13426 PAS_9 > GO:signal transduction ; GO:0007165
Pfam:PF13442 Cytochrome_CBB3 > GO:electron carrier activity ; GO:0009055
Pfam:PF13442 Cytochrome_CBB3 > GO:heme binding ; GO:0020037
Pfam:PF13443 HTH_26 > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF13463 HTH_27 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF13463 HTH_27 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF13463 HTH_27 > GO:intracellular ; GO:0005622
Pfam:PF13492 GAF_3 > GO:protein binding ; GO:0005515
Pfam:PF13495 Phage_int_SAM_4 > GO:DNA binding ; GO:0003677
Pfam:PF13495 Phage_int_SAM_4 > GO:DNA integration ; GO:0015074
Pfam:PF13499 EF-hand_7 > GO:calcium ion binding ; GO:0005509
Pfam:PF13504 LRR_7 > GO:protein binding ; GO:0005515
Pfam:PF13506 Glyco_transf_21 > GO:transferase activity, transferring glycosyl groups ; GO:0016757
Pfam:PF13508 Acetyltransf_7 > GO:N-acetyltransferase activity ; GO:0008080
Pfam:PF13520 AA_permease_2 > GO:amino acid transmembrane transporter activity ; GO:0015171
Pfam:PF13520 AA_permease_2 > GO:amino acid transmembrane transport ; GO:0003333
Pfam:PF13520 AA_permease_2 > GO:membrane ; GO:0016020
Pfam:PF13537 GATase_7 > GO:metabolic process ; GO:0008152
Pfam:PF13580 SIS_2 > GO:carbohydrate binding ; GO:0030246
Pfam:PF13580 SIS_2 > GO:carbohydrate metabolic process ; GO:0005975
Pfam:PF13603 tRNA-synt_1_2 > GO:aminoacyl-tRNA editing activity ; GO:0002161
Pfam:PF13603 tRNA-synt_1_2 > GO:tRNA aminoacylation for protein translation ; GO:0006418
Pfam:PF13606 Ank_3 > GO:protein binding ; GO:0005515
Pfam:PF13631 Cytochrom_B_N_2 > GO:electron carrier activity ; GO:0009055
Pfam:PF13631 Cytochrom_B_N_2 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF13631 Cytochrom_B_N_2 > GO:membrane ; GO:0016020
Pfam:PF13639 zf-RING_2 > GO:protein binding ; GO:0005515
Pfam:PF13639 zf-RING_2 > GO:zinc ion binding ; GO:0008270
Pfam:PF13640 2OG-FeII_Oxy_3 > GO:oxidoreductase activity ; GO:0016491
Pfam:PF13640 2OG-FeII_Oxy_3 > GO:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors ; GO:0016706
Pfam:PF13640 2OG-FeII_Oxy_3 > GO:oxidation-reduction process ; GO:0055114
Pfam:PF13673 Acetyltransf_10 > GO:N-acetyltransferase activity ; GO:0008080
Pfam:PF13676 TIR_2 > GO:protein binding ; GO:0005515
Pfam:PF13676 TIR_2 > GO:signal transduction ; GO:0007165
Pfam:PF13691 Lactamase_B_4 > GO:tRNA processing ; GO:0008033
Pfam:PF13694 Hph > GO:response to stress ; GO:0006950
Pfam:PF13694 Hph > GO:endoplasmic reticulum ; GO:0005783
Pfam:PF13718 GNAT_acetyltr_2 > GO:N-acetyltransferase activity ; GO:0008080
Pfam:PF13724 DNA_binding_2 > GO:DNA binding ; GO:0003677
Pfam:PF13741 MRP-S25 > GO:structural constituent of ribosome ; GO:0003735
Pfam:PF13741 MRP-S25 > GO:mitochondrial small ribosomal subunit ; GO:0005763
Pfam:PF13742 tRNA_anti_2 > GO:nucleic acid binding ; GO:0003676
Pfam:PF13746 Fer4_18 > GO:iron-sulfur cluster binding ; GO:0051536
Pfam:PF13748 ABC_membrane_3 > GO:ATP binding ; GO:0005524
Pfam:PF13748 ABC_membrane_3 > GO:ATPase activity, coupled to transmembrane movement of substances ; GO:0042626
Pfam:PF13748 ABC_membrane_3 > GO:transport ; GO:0006810
Pfam:PF13748 ABC_membrane_3 > GO:transmembrane transport ; GO:0055085
Pfam:PF13748 ABC_membrane_3 > GO:integral component of membrane ; GO:0016021
Pfam:PF13851 GAS > GO:cell motility ; GO:0048870
Pfam:PF13851 GAS > GO:motile cilium ; GO:0031514
Pfam:PF13855 LRR_8 > GO:protein binding ; GO:0005515
Pfam:PF13867 SAP30_Sin3_bdg > GO:protein binding ; GO:0005515
Pfam:PF13869 NUDIX_2 > GO:mRNA binding ; GO:0003729
Pfam:PF13869 NUDIX_2 > GO:mRNA polyadenylation ; GO:0006378
Pfam:PF13869 NUDIX_2 > GO:mRNA cleavage factor complex ; GO:0005849
Pfam:PF13885 Keratin_B2_2 > GO:keratin filament ; GO:0045095
Pfam:PF13890 Rab3-GTPase_cat > GO:Rab GTPase activator activity ; GO:0005097
Pfam:PF13892 DBINO > GO:hydrolase activity, acting on acid anhydrides ; GO:0016817
Pfam:PF13897 GOLD_2 > GO:transport ; GO:0006810
Pfam:PF13897 GOLD_2 > GO:integral component of membrane ; GO:0016021
Pfam:PF13903 Claudin_2 > GO:integral component of membrane ; GO:0016021
Pfam:PF13914 Phostensin > GO:phosphatase binding ; GO:0019902
Pfam:PF13922 PHD_3 > GO:DNA binding ; GO:0003677
Pfam:PF13929 mRNA_stabil > GO:mRNA stabilization ; GO:0048255
Pfam:PF13931 Microtub_bind > GO:microtubule binding ; GO:0008017
Pfam:PF13947 GUB_WAK_bind > GO:polysaccharide binding ; GO:0030247
Pfam:PF13949 ALIX_LYPXL_bnd > GO:protein binding ; GO:0005515
Pfam:PF13954 PapC_N > GO:protein binding ; GO:0005515
Pfam:PF13965 SID-1_RNA_chan > GO:RNA transmembrane transporter activity ; GO:0051033
Pfam:PF13965 SID-1_RNA_chan > GO:dsRNA transport ; GO:0033227
Pfam:PF13965 SID-1_RNA_chan > GO:integral component of membrane ; GO:0016021
Pfam:PF13971 Mei4 > GO:DNA recombination ; GO:0006310
Pfam:PF13971 Mei4 > GO:meiotic DNA double-strand break formation ; GO:0042138
Pfam:PF13979 SopA_C > GO:ubiquitin-protein transferase activity ; GO:0004842
Pfam:PF13979 SopA_C > GO:protein ubiquitination ; GO:0016567
Pfam:PF13994 PgaD > GO:biofilm formation ; GO:0042710
Pfam:PF14010 PEPcase_2 > GO:phosphoenolpyruvate carboxylase activity ; GO:0008964
Pfam:PF14010 PEPcase_2 > GO:tricarboxylic acid cycle ; GO:0006099
Pfam:PF14010 PEPcase_2 > GO:carbon fixation ; GO:0015977
Pfam:PF14073 Cep57_CLD > GO:identical protein binding ; GO:0042802
Pfam:PF14073 Cep57_CLD > GO:gamma-tubulin binding ; GO:0043015
Pfam:PF14089 KbaA > GO:positive regulation of sporulation resulting in formation of a cellular spore ; GO:0045881
Pfam:PF14098 SSPI > GO:asexual sporulation ; GO:0030436
Pfam:PF14102 Caps_synth_CapC > GO:capsule polysaccharide biosynthetic process ; GO:0045227
Pfam:PF14102 Caps_synth_CapC > GO:membrane ; GO:0016020
Pfam:PF14138 COX16 > GO:mitochondrial membrane ; GO:0031966
Pfam:PF14144 DOG1 > GO:sequence-specific DNA binding ; GO:0043565
Pfam:PF14144 DOG1 > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF14171 SpoIISA_toxin > GO:pathogenesis ; GO:0009405
Pfam:PF14171 SpoIISA_toxin > GO:integral component of membrane ; GO:0016021
Pfam:PF14249 Tocopherol_cycl > GO:tocopherol cyclase activity ; GO:0009976
Pfam:PF14372 DUF4413 > GO:DNA binding ; GO:0003677
Pfam:PF14483 Cut8_M > GO:protein dimerization activity ; GO:0046983
Pfam:PF14489 QueF > GO:preQ1 synthase activity ; GO:0033739
Pfam:PF14489 QueF > GO:queuosine biosynthetic process ; GO:0008616
Pfam:PF14496 NEL > GO:ubiquitin-protein transferase activity ; GO:0004842
Pfam:PF14496 NEL > GO:protein ubiquitination ; GO:0016567
Pfam:PF14521 Aspzincin_M35 > GO:metalloendopeptidase activity ; GO:0004222
Pfam:PF14528 LAGLIDADG_3 > GO:endonuclease activity ; GO:0004519
Pfam:PF14552 Tautomerase_2 > GO:isomerase activity ; GO:0016853
Pfam:PF14552 Tautomerase_2 > GO:cellular aromatic compound metabolic process ; GO:0006725
Pfam:PF14554 VEGF_C > GO:heparin binding ; GO:0008201
Pfam:PF14560 Ubiquitin_2 > GO:protein binding ; GO:0005515
Pfam:PF14565 IL22 > GO:extracellular region ; GO:0005576
Pfam:PF14572 Pribosyl_synth > GO:magnesium ion binding ; GO:0000287
Pfam:PF14572 Pribosyl_synth > GO:ribose phosphate diphosphokinase activity ; GO:0004749
Pfam:PF14572 Pribosyl_synth > GO:nucleotide biosynthetic process ; GO:0009165
Pfam:PF14583 Pectate_lyase22 > GO:oligogalacturonide lyase activity ; GO:0047487
Pfam:PF14583 Pectate_lyase22 > GO:pectin catabolic process ; GO:0045490
Pfam:PF14604 SH3_9 > GO:protein binding ; GO:0005515
Pfam:PF14619 SnAC > GO:histone binding ; GO:0042393
Pfam:PF14622 Ribonucleas_3_3 > GO:RNA binding ; GO:0003723
Pfam:PF14622 Ribonucleas_3_3 > GO:ribonuclease III activity ; GO:0004525
Pfam:PF14622 Ribonucleas_3_3 > GO:RNA processing ; GO:0006396
Pfam:PF14630 ORC5_C > GO:DNA replication ; GO:0006260
Pfam:PF14630 ORC5_C > GO:origin recognition complex ; GO:0000808
Pfam:PF14630 ORC5_C > GO:nucleus ; GO:0005634
Pfam:PF14631 FancD2 > GO:DNA repair ; GO:0006281
Pfam:PF14633 SH2_2 > GO:protein binding ; GO:0005515
Pfam:PF14634 zf-RING_5 > GO:protein binding ; GO:0005515
Pfam:PF14634 zf-RING_5 > GO:zinc ion binding ; GO:0008270
Pfam:PF14641 HTH_44 > GO:DNA binding ; GO:0003677
Pfam:PF14659 Phage_int_SAM_3 > GO:DNA binding ; GO:0003677
Pfam:PF14659 Phage_int_SAM_3 > GO:DNA integration ; GO:0015074
Pfam:PF14672 LCE > GO:epidermis development ; GO:0008544
Pfam:PF14718 SLT_L > GO:hydrolase activity, hydrolyzing O-glycosyl compounds ; GO:0004553
Pfam:PF14718 SLT_L > GO:periplasmic space ; GO:0042597
Pfam:PF14719 PID_2 > GO:protein binding ; GO:0005515
Pfam:PF14721 AIF_C > GO:protein dimerization activity ; GO:0046983
Pfam:PF14722 KRAP_IP3R_bind > GO:receptor binding ; GO:0005102
Pfam:PF14724 mit_SMPDase > GO:sphingomyelin phosphodiesterase D activity ; GO:0050290
Pfam:PF14735 HAUS4 > GO:spindle assembly ; GO:0051225
Pfam:PF14735 HAUS4 > GO:HAUS complex ; GO:0070652
Pfam:PF14736 N_Asn_amidohyd > GO:protein-N-terminal asparagine amidohydrolase activity ; GO:0008418
Pfam:PF14750 INTS2 > GO:integrator complex ; GO:0032039
Pfam:PF14764 SPG48 > GO:AP-5 adaptor complex ; GO:0044599
Pfam:PF14777 BBIP10 > GO:cilium assembly ; GO:0042384
Pfam:PF14777 BBIP10 > GO:BBSome ; GO:0034464
Pfam:PF14817 HAUS5 > GO:spindle assembly ; GO:0051225
Pfam:PF14820 SPRR2 > GO:cornified envelope ; GO:0001533
Pfam:PF14822 Vasohibin > GO:regulation of angiogenesis ; GO:0045765
Pfam:PF14822 Vasohibin > GO:cytoplasm ; GO:0005737
Pfam:PF14829 GPAT_N > GO:glycerol-3-phosphate O-acyltransferase activity ; GO:0004366
Pfam:PF14833 NAD_binding_11 > GO:NAD binding ; GO:0051287
Pfam:PF14850 Pro_dh-DNA_bdg > GO:1-pyrroline-5-carboxylate dehydrogenase activity ; GO:0003842
Pfam:PF14850 Pro_dh-DNA_bdg > GO:oxidation-reduction process ; GO:0055114
Pfam:PF14859 Colicin_M > GO:defense response to bacterium ; GO:0042742
Pfam:PF14860 DrrA_P4M > GO:Rab GTPase binding ; GO:0017137
Pfam:PF14860 DrrA_P4M > GO:pathogenesis ; GO:0009405
Pfam:PF14860 DrrA_P4M > GO:regulation of Rab GTPase activity ; GO:0032313
Pfam:PF14860 DrrA_P4M > GO:host cell cytoplasmic vesicle ; GO:0044161
Pfam:PF14861 Antimicrobial21 > GO:defense response to fungus ; GO:0050832
Pfam:PF14862 Defensin_big > GO:defense response to Gram-negative bacterium ; GO:0050829
Pfam:PF14862 Defensin_big > GO:defense response to Gram-positive bacterium ; GO:0050830
Pfam:PF14863 Alkyl_sulf_dimr > GO:protein dimerization activity ; GO:0046983
Pfam:PF14865 Macin > GO:defense response ; GO:0006952
Pfam:PF14867 Lantibiotic_a > GO:defense response to Gram-positive bacterium ; GO:0050830
Pfam:PF14876 RSF > GO:cellular respiration ; GO:0045333
Pfam:PF14876 RSF > GO:nucleus ; GO:0005634
Pfam:PF14876 RSF > GO:mitochondrion ; GO:0005739
Pfam:PF14928 S_tail_recep_bd > GO:metal ion binding ; GO:0046872
Pfam:PF14942 Muted > GO:transport vesicle ; GO:0030133
Pfam:PF14942 Muted > GO:BLOC-1 complex ; GO:0031083
Pfam:PF14943 MRP-S26 > GO:mitochondrial small ribosomal subunit ; GO:0005763
Pfam:PF14972 Mito_morph_reg > GO:mitochondrion organization ; GO:0007005
Pfam:PF14972 Mito_morph_reg > GO:integral component of mitochondrial inner membrane ; GO:0031305
Pfam:PF14978 MRP-63 > GO:mitochondrial ribosome ; GO:0005761
Pfam:PF14980 TIP39 > GO:neuropeptide signaling pathway ; GO:0007218
Pfam:PF14980 TIP39 > GO:extracellular region ; GO:0005576
Pfam:PF14984 CD24 > GO:cell adhesion ; GO:0007155
Pfam:PF14991 MLANA > GO:melanosome ; GO:0042470
Pfam:PF14993 Neuropeptide_S > GO:neuropeptide signaling pathway ; GO:0007218
Pfam:PF14993 Neuropeptide_S > GO:extracellular region ; GO:0005576
Pfam:PF14999 Shadoo > GO:anchored component of membrane ; GO:0031225
Pfam:PF15001 AP-5_subunit_s1 > GO:double-strand break repair via homologous recombination ; GO:0000724
Pfam:PF15001 AP-5_subunit_s1 > GO:endosomal transport ; GO:0016197
Pfam:PF15001 AP-5_subunit_s1 > GO:AP-type membrane coat adaptor complex ; GO:0030119
Pfam:PF15003 HAUS2 > GO:microtubule organizing center organization ; GO:0031023
Pfam:PF15003 HAUS2 > GO:spindle assembly ; GO:0051225
Pfam:PF15009 TMEM173 > GO:activation of innate immune response ; GO:0002218
Pfam:PF15009 TMEM173 > GO:positive regulation of type I interferon production ; GO:0032481
Pfam:PF15014 CLN5 > GO:neurogenesis ; GO:0022008
Pfam:PF15014 CLN5 > GO:lysosome ; GO:0005764
Pfam:PF15015 NYD-SP12_N > GO:spermatogenesis ; GO:0007283
Pfam:PF15015 NYD-SP12_N > GO:Golgi apparatus ; GO:0005794
Pfam:PF15020 CATSPERD > GO:CatSper complex ; GO:0036128
Pfam:PF15036 IL34 > GO:macrophage colony-stimulating factor receptor binding ; GO:0005157
Pfam:PF15036 IL34 > GO:positive regulation of protein phosphorylation ; GO:0001934
Pfam:PF15036 IL34 > GO:positive regulation of cell proliferation ; GO:0008284
Pfam:PF15036 IL34 > GO:extracellular space ; GO:0005615
Pfam:PF15048 OSTbeta > GO:transporter activity ; GO:0005215
Pfam:PF15048 OSTbeta > GO:protein heterodimerization activity ; GO:0046982
Pfam:PF15048 OSTbeta > GO:bile acid and bile salt transport ; GO:0015721
Pfam:PF15048 OSTbeta > GO:plasma membrane ; GO:0005886
Pfam:PF15050 SCIMP > GO:immunological synapse ; GO:0001772
Pfam:PF15050 SCIMP > GO:integral component of membrane ; GO:0016021
Pfam:PF15050 SCIMP > GO:tetraspanin-enriched microdomain ; GO:0097197
Pfam:PF15060 PPDFL > GO:multicellular organismal development ; GO:0007275
Pfam:PF15060 PPDFL > GO:cell differentiation ; GO:0030154
Pfam:PF15064 CATSPERG > GO:CatSper complex ; GO:0036128
Pfam:PF15064 CATSPERG > GO:sperm principal piece ; GO:0097228
Pfam:PF15085 NPFF > GO:neuropeptide hormone activity ; GO:0005184
Pfam:PF15088 NADH_dh_m_C1 > GO:mitochondrion ; GO:0005739
Pfam:PF15088 NADH_dh_m_C1 > GO:mitochondrial respiratory chain complex I ; GO:0005747
Pfam:PF15095 IL33 > GO:cytokine activity ; GO:0005125
Pfam:PF15096 G6B > GO:integral component of membrane ; GO:0016021
Pfam:PF15108 TMEM37 > GO:voltage-gated ion channel activity ; GO:0005244
Pfam:PF15108 TMEM37 > GO:calcium channel activity ; GO:0005262
Pfam:PF15108 TMEM37 > GO:integral component of membrane ; GO:0016021
Pfam:PF15127 DUF4565 > GO:protein kinase A regulatory subunit binding ; GO:0034237
Pfam:PF15138 Syncollin > GO:exocytosis ; GO:0006887
Pfam:PF15138 Syncollin > GO:secretory granule membrane ; GO:0030667
Pfam:PF15146 FANCAA > GO:DNA repair ; GO:0006281
Pfam:PF15146 FANCAA > GO:Fanconi anaemia nuclear complex ; GO:0043240
Pfam:PF15149 CATSPERB > GO:CatSper complex ; GO:0036128
Pfam:PF15150 PMAIP1 > GO:release of cytochrome c from mitochondria ; GO:0001836
Pfam:PF15150 PMAIP1 > GO:apoptotic process ; GO:0006915
Pfam:PF15150 PMAIP1 > GO:activation of cysteine-type endopeptidase activity involved in apoptotic process ; GO:0006919
Pfam:PF15150 PMAIP1 > GO:cellular response to DNA damage stimulus ; GO:0006974
Pfam:PF15151 RGCC > GO:regulation of cell cycle ; GO:0051726
Pfam:PF15163 Meiosis_expr > GO:nucleus ; GO:0005634
Pfam:PF15168 TRIQK > GO:endoplasmic reticulum membrane ; GO:0005789
Pfam:PF15170 CaM-KIIN > GO:protein kinase inhibitor activity ; GO:0004860
Pfam:PF15172 Prolactin_RP > GO:hormone activity ; GO:0005179
Pfam:PF15177 IL28A > GO:cytokine activity ; GO:0005125
Pfam:PF15177 IL28A > GO:JAK-STAT cascade ; GO:0007259
Pfam:PF15177 IL28A > GO:positive regulation of immune response ; GO:0050778
Pfam:PF15177 IL28A > GO:defense response to virus ; GO:0051607
Pfam:PF15178 TOM_sub5 > GO:mitochondrial outer membrane translocase complex ; GO:0005742
Pfam:PF15180 NPBW > GO:G-protein coupled receptor binding ; GO:0001664
Pfam:PF15182 OTOS > GO:sensory perception of sound ; GO:0007605
Pfam:PF15184 TOMM6 > GO:mitochondrial outer membrane translocase complex ; GO:0005742
Pfam:PF15185 BMF > GO:apoptotic process ; GO:0006915
Pfam:PF15191 Synaptonemal_3 > GO:synaptonemal complex assembly ; GO:0007130
Pfam:PF15191 Synaptonemal_3 > GO:reciprocal meiotic recombination ; GO:0007131
Pfam:PF15191 Synaptonemal_3 > GO:spermatogenesis ; GO:0007283
Pfam:PF15199 DAOA > GO:negative regulation of D-amino-acid oxidase activity ; GO:1900758
Pfam:PF15200 KRTDAP > GO:extracellular region ; GO:0005576
Pfam:PF15202 Adipogenin > GO:fat cell differentiation ; GO:0045444
Pfam:PF15208 Rab15_effector > GO:receptor recycling ; GO:0001881
Pfam:PF15216 TSLP > GO:cytokine activity ; GO:0005125
Pfam:PF15220 HILPDA > GO:positive regulation of cytokine production ; GO:0001819
Pfam:PF15220 HILPDA > GO:positive regulation of cell proliferation ; GO:0008284
Pfam:PF15220 HILPDA > GO:positive regulation of lipid storage ; GO:0010884
Pfam:PF15221 LEP503 > GO:multicellular organismal development ; GO:0007275
Pfam:PF15225 IL32 > GO:immune response ; GO:0006955
Pfam:PF15233 SYCE1 > GO:meiotic prophase I ; GO:0007128
Pfam:PF15233 SYCE1 > GO:synaptonemal complex assembly ; GO:0007130
Pfam:PF15233 SYCE1 > GO:synaptonemal complex organization ; GO:0070193
Pfam:PF15233 SYCE1 > GO:synaptonemal complex ; GO:0000795
Pfam:PF15234 LAT > GO:signal transduction ; GO:0007165
Pfam:PF15234 LAT > GO:membrane ; GO:0016020
Pfam:PF15245 VGLL4 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF15247 SLBP_RNA_bind > GO:RNA binding ; GO:0003723
Pfam:PF15281 Consortin_C > GO:connexin binding ; GO:0071253
Pfam:PF15281 Consortin_C > GO:positive regulation of Golgi to plasma membrane protein transport ; GO:0042998
Pfam:PF15281 Consortin_C > GO:trans-Golgi network ; GO:0005802
Pfam:PF15291 Dermcidin > GO:peptidase activity ; GO:0008233
Pfam:PF15291 Dermcidin > GO:killing of cells of other organism ; GO:0031640
Pfam:PF15291 Dermcidin > GO:extracellular region ; GO:0005576
Pfam:PF15305 IFT43 > GO:intraciliary transport particle A ; GO:0030991
Pfam:PF15306 LIN37 > GO:cell cycle ; GO:0007049
Pfam:PF15306 LIN37 > GO:transcriptional repressor complex ; GO:0017053
Pfam:PF15307 SPACA7 > GO:acrosomal vesicle ; GO:0001669
Pfam:PF15310 VAD1-2 > GO:spermatogenesis ; GO:0007283
Pfam:PF15313 HEXIM > GO:cyclin-dependent protein serine/threonine kinase inhibitor activity ; GO:0004861
Pfam:PF15313 HEXIM > GO:snRNA binding ; GO:0017069
Pfam:PF15313 HEXIM > GO:negative regulation of transcription from RNA polymerase II promoter ; GO:0000122
Pfam:PF15313 HEXIM > GO:nucleus ; GO:0005634
Pfam:PF15313 HEXIM > GO:cytoplasm ; GO:0005737
Pfam:PF15319 RHINO > GO:DNA damage checkpoint ; GO:0000077
Pfam:PF15319 RHINO > GO:cellular response to ionizing radiation ; GO:0071479
Pfam:PF15319 RHINO > GO:nucleus ; GO:0005634
Pfam:PF15320 RAM > GO:RNA binding ; GO:0003723
Pfam:PF15320 RAM > GO:methylation ; GO:0032259
Pfam:PF15320 RAM > GO:mRNA cap binding complex ; GO:0005845
Pfam:PF15323 Ashwin > GO:embryonic morphogenesis ; GO:0048598
Pfam:PF15323 Ashwin > GO:tRNA-splicing ligase complex ; GO:0072669
Pfam:PF15324 TALPID3 > GO:smoothened signaling pathway ; GO:0007224
Pfam:PF15332 LIME1 > GO:T cell receptor signaling pathway ; GO:0050852
Pfam:PF15332 LIME1 > GO:B cell receptor signaling pathway ; GO:0050853
Pfam:PF15333 TAF1D > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF15333 TAF1D > GO:nucleus ; GO:0005634
Pfam:PF15333 TAF1D > GO:RNA polymerase transcription factor SL1 complex ; GO:0005668
Pfam:PF15337 Vasculin > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF15337 Vasculin > GO:transcription, DNA-templated ; GO:0006351
Pfam:PF15337 Vasculin > GO:positive regulation of transcription, DNA-templated ; GO:0045893
Pfam:PF15337 Vasculin > GO:nucleus ; GO:0005634
Pfam:PF15339 Afaf > GO:endocytosis ; GO:0006897
Pfam:PF15339 Afaf > GO:fusion of sperm to egg plasma membrane ; GO:0007342
Pfam:PF15339 Afaf > GO:acrosomal vesicle exocytosis ; GO:0060478
Pfam:PF15339 Afaf > GO:plasma membrane ; GO:0005886
Pfam:PF15340 COPR5 > GO:histone binding ; GO:0042393
Pfam:PF15340 COPR5 > GO:histone H4-R3 methylation ; GO:0043985
Pfam:PF15340 COPR5 > GO:nucleus ; GO:0005634
Pfam:PF15341 SLX9 > GO:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ; GO:0000462
Pfam:PF15341 SLX9 > GO:nucleolus ; GO:0005730
Pfam:PF15341 SLX9 > GO:90S preribosome ; GO:0030686
Pfam:PF15341 SLX9 > GO:preribosome, small subunit precursor ; GO:0030688
Pfam:PF15351 JCAD > GO:cell-cell junction ; GO:0005911
Pfam:PF15360 Apelin > GO:hormone activity ; GO:0005179
Pfam:PF15360 Apelin > GO:apelin receptor binding ; GO:0031704
Pfam:PF15360 Apelin > GO:signal transduction ; GO:0007165
Pfam:PF15367 CABS1 > GO:calcium ion binding ; GO:0005509
Pfam:PF15367 CABS1 > GO:spermatogenesis ; GO:0007283
Pfam:PF15427 S100PBPR > GO:calcium-dependent protein binding ; GO:0048306
Pfam:PF15432 Sec-ASP3 > GO:protein transport ; GO:0015031
Pfam:PF15453 Pilt > GO:tight junction ; GO:0005923
Pfam:PF15454 LAMTOR > GO:regulation of receptor recycling ; GO:0001919
Pfam:PF15454 LAMTOR > GO:lysosome organization ; GO:0007040
Pfam:PF15454 LAMTOR > GO:positive regulation of TOR signaling ; GO:0032008
Pfam:PF15454 LAMTOR > GO:endosome localization ; GO:0032439
Pfam:PF15454 LAMTOR > GO:cholesterol homeostasis ; GO:0042632
Pfam:PF15454 LAMTOR > GO:positive regulation of MAPK cascade ; GO:0043410
Pfam:PF15454 LAMTOR > GO:cellular response to amino acid stimulus ; GO:0071230
Pfam:PF15454 LAMTOR > GO:late endosome membrane ; GO:0031902
Pfam:PF15454 LAMTOR > GO:membrane raft ; GO:0045121
Pfam:PF15454 LAMTOR > GO:Ragulator complex ; GO:0071986
Pfam:PF15457 HopW1-1 > GO:interspecies interaction between organisms ; GO:0044419
Pfam:PF15458 NTR2 > GO:spliceosomal complex disassembly ; GO:0000390
Pfam:PF15458 NTR2 > GO:U2-type post-mRNA release spliceosomal complex ; GO:0071008
Pfam:PF15460 SAS4 > GO:histone acetylation ; GO:0016573
Pfam:PF15461 BCD > GO:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen ; GO:0016702
Pfam:PF15461 BCD > GO:oxidation-reduction process ; GO:0055114
Pfam:PF15462 Barttin > GO:chloride transport ; GO:0006821
Pfam:PF15469 Sec5 > GO:Golgi to plasma membrane transport ; GO:0006893
Pfam:PF15469 Sec5 > GO:exocyst ; GO:0000145
Pfam:PF15473 PCNP > GO:protein ubiquitination ; GO:0016567
Pfam:PF15476 SAP25 > GO:regulation of transcription, DNA-templated ; GO:0006355
Pfam:PF15476 SAP25 > GO:nucleus ; GO:0005634
Pfam:PF15476 SAP25 > GO:cytoplasm ; GO:0005737
Pfam:PF15489 CTC1 > GO:single-stranded DNA binding ; GO:0003697
Pfam:PF15490 Ten1_2 > GO:single-stranded DNA binding ; GO:0003697
Pfam:PF15490 Ten1_2 > GO:Stn1-Ten1 complex ; GO:0070188
Pfam:PF15491 CTC1_2 > GO:telomere maintenance ; GO:0000723
Pfam:PF15497 SNAPc19 > GO:sequence-specific DNA binding transcription factor activity ; GO:0003700
Pfam:PF15497 SNAPc19 > GO:transcription from RNA polymerase II promoter ; GO:0006366
Pfam:PF15497 SNAPc19 > GO:transcription initiation from RNA polymerase III promoter ; GO:0006384
Pfam:PF15497 SNAPc19 > GO:nucleus ; GO:0005634
Pfam:PF15499 Peptidase_C98 > GO:SUMO binding ; GO:0032183
Pfam:PF15499 Peptidase_C98 > GO:SUMO-specific isopeptidase activity ; GO:0070140
Pfam:PF15501 MDM1 > GO:nucleus ; GO:0005634
Pfam:PF15510 CENP-W > GO:DNA binding ; GO:0003677
Pfam:PF15510 CENP-W > GO:mitotic nuclear division ; GO:0007067
Pfam:PF15510 CENP-W > GO:kinetochore assembly ; GO:0051382
Pfam:PF15549 PGC7_Stella > GO:methylated histone binding ; GO:0035064
Pfam:PF15550 Draxin > GO:axon guidance ; GO:0007411
Pfam:PF15550 Draxin > GO:Wnt signaling pathway ; GO:0016055
Pfam:PF15550 Draxin > GO:extracellular region ; GO:0005576
Pfam:PF15556 Zwint > GO:mitotic cell cycle checkpoint ; GO:0007093
Pfam:PF15556 Zwint > GO:kinetochore ; GO:0000776