1 <?xml version="1.0" encoding="UTF-8"?>
2 <phyloxml xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
3 xsi:schemaLocation="http://www.phyloxml.org http://www.phyloxml.org/1.00/phyloxml.xsd"
4 xmlns="http://www.phyloxml.org">
5 <phylogeny rooted="true" rerootable="false">
7 <name>cellular_organisms</name>
10 <reference doi="10.1101/gr.187002"/>
12 <name>Spirochaetes</name>
23 <name>Chlamydiales</name>
28 <name>Chlamydia</name>
40 <name>hyperthermophilic</name>
51 <name>Proteobacteria</name>
53 <name>Epsilonproteobacteria</name>
58 <name>Campylobacterales</name>
70 <name>Alphaproteobacteria</name>
81 <name>Betaproteobacteria</name>
90 <name>Gammaproteobacteria</name>
111 <name>Pasteurellales</name>
128 <name>Firmicutes</name>
130 <name>Mycoplasmataceae</name>
135 <name>Mycoplasma</name>
147 <name>Lactobacillales</name>
156 <name>Bacillales</name>
161 <name>Bacillaceae</name>
175 <name>Cyanobacteria</name>
177 <name>Synechococcus</name>
186 <name>Nostocaceae</name>
201 <name>Actinobacteria</name>
206 <name>Mycobacterium</name>
223 <name>Archaea_Eukaryota</name>
226 <reference doi="10.1186/1471-2164-8-86"/>
228 <name>Crenarchaeota</name>
255 <name>Euryarchaeota</name>
257 <name>Thermococci</name>
287 <name>Methanococcales</name>
296 <name>Methanobacteria</name>
308 <name>Thermoplasmata</name>
330 <name>Halobacteria</name>
350 <name>Methanosarcinales</name>
385 <name>Eukaryota</name>
388 <reference doi="10.1099/ijs.0.63216-0"/>
390 <name>Excavata</name>
391 <reference doi="10.1126/science.1143837"/>
396 <name>Kinetoplastida_Heterolobosea</name>
401 <name>Kinetoplastida</name>
412 <name>Corticata</name>
414 <name>Chromalveolate</name>
415 <reference doi="10.1073/pnas.0712248105"/>
420 <name>Heterokonta_Alveolata</name>
422 <name>Heterokonta</name>
424 <name>Bacillariophyta</name>
433 <name>Oomycetes</name>
446 <name>Alveolata</name>
448 <name>Ciliophora</name>
457 <name>Apicomplexa</name>
459 <name>Coccidia</name>
464 <name>Cryptosporidium</name>
474 <name>Aconoidasida</name>
476 <name>Plasmodium</name>
485 <name>Theileria</name>
499 <name>Archaeplastida</name>
504 <name>Viridiplantae</name>
507 <name>Chlorophyceae_Prasinophyceae</name>
509 <name>Chlorophyceae</name>
518 <name>Prasinophyceae</name>
520 <name>Ostreococcus</name>
529 <name>Micromonas</name>
540 <name>Embryophyta</name>
545 <name>Tracheophyta</name>
550 <name>Magnoliophyta</name>
552 <name>Eudicotyledons</name>
586 <name>Unikonta</name>
588 <name>Amoebozoa</name>
597 <name>Opisthokonta</name>
600 <reference doi="10.1186/1471-2148-6-99"/>
602 <name>Mucoromycotina</name>
613 <name>Basidiomycota</name>
618 <name>Agaricomycotina</name>
623 <name>Agaricomycetes</name>
628 <name>Agaricales</name>
640 <name>Ascomycota</name>
647 <name>Pezizomycotina</name>
649 <name>Eurotiomycetes</name>
666 <name>Trichocomaceae</name>
695 <name>Leotiomycetes</name>
704 <name>Sordariomycetes</name>
706 <name>Hypocreales</name>
711 <name>Gibberella</name>
746 <name>Saccharomycotina</name>
815 <name>Saccharomyces</name>
855 <name>Metazoa_Choanoflagellata</name>
863 <reference doi="10.1073/pnas.0602076103"/>
866 <name>Bilateria_Cnidaria</name>
871 <name>Bilateria</name>
873 <name>Nematoda</name>
882 <name>Protostomia_Deuterostomia</name>
884 <name>Protostomia</name>
886 <name>Lophotrochozoa</name>
891 <name>Annelida</name>
901 <name>Arthropoda</name>
911 <name>Diptera_Hymenoptera</name>
918 <name>Muscomorpha</name>
927 <name>Culicoidea</name>
941 <name>Deuterostomia</name>
942 <reference doi="10.1038/nature04336"/>
947 <name>Chordata</name>
952 <name>Urochordata_Vertebrata</name>
954 <name>Urochordata</name>
963 <name>Vertebrata</name>
965 <name>Teleostei</name>
970 <name>Euteleostei</name>
972 <name>Smegmamorpha</name>
974 <id type="taxonomy id">129949</id>
984 <name>Tetraodontiformes</name>
995 <name>Tetrapoda</name>
1000 <name>Amniota</name>
1005 <name>Mammalia</name>
1010 <name>Euarchontoglires</name>
1012 <name>Rodentia</name>
1021 <name>Primates</name>