1 <?xml version="1.0" encoding="UTF-8"?>
2 <phyloxml xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.phyloxml.org http://www.phyloxml.org/1.00/phyloxml.xsd" xmlns="http://www.phyloxml.org">
3 <phylogeny rooted="true" rerootable="false">
5 <name>cellular_organisms</name>
13 <name>Opisthokonta</name>
15 <name>Metazoa_Choanoflagellata</name>
18 <reference doi="10.1038/nature06614"></reference>
20 <name>Bilateria_Cnidaria</name>
22 <name>Bilateria</name>
24 <name>Deuterostomia_Protostomia_Nematoda</name>
26 <name>Deuterostomia_Protostomia</name>
28 <name>Deuterostomia</name>
29 <reference doi="10.1038/nature04336"></reference>
33 <name>Cephalochordata_Vertebrata</name>
35 <name>Vertebrata</name>
37 <name>Tetrapoda</name>
47 <name>Euarchontoglires</name>
88 <name>Teleostei</name>
90 <name>Euteleostei</name>
92 <name>Smegmamorpha</name>
94 <id type="ncbi">129949</id>
104 <name>Tetraodontiformes</name>
123 <name>Urochordata</name>
125 <id type="ncbi">7712</id>
126 <scientific_name>Urochordata</scientific_name>
127 <common_name>tunicates</common_name>
130 <name>Ascidiacea</name>
132 <id type="ncbi">7713</id>
133 <scientific_name>Ascidiacea</scientific_name>
134 <common_name>sea squirts</common_name>
146 <id type="ncbi">34765</id>
147 <scientific_name>Oikopleura dioica</scientific_name>
157 <name>Protostomia</name>
159 <name>Arthropoda_Annelida</name>
161 <name>Arthropoda</name>
165 <name>Lepidoptera_Diptera_Hymenoptera</name>
167 <name>Lepidoptera_Diptera</name>
171 <name>Muscomorpha</name>
180 <name>Culicoidea</name>
197 <name>Hymenoptera</name>
215 <name>Annelida</name>
230 <name>Nematoda</name>
240 <name>Platyhelminthes</name>
255 <reference doi="10.1073/pnas.0602076103"></reference>
271 <name>Ascomycota</name>
273 <name>Pezizomycotina</name>
452 <name>Saccharomycotina</name>
557 <name>Taphrinomycotina</name>
574 <name>Basidiomycota</name>
620 <name>Mucoromycotina</name>
639 <name>Amoebozoa</name>
641 <name>Dictyostelium</name>
656 <reference doi="10.1099/ijs.0.63216-0"></reference>
658 <name>Corticata</name>
660 <name>Chromalveolate</name>
661 <reference doi="10.1073/pnas.0712248105"></reference>
663 <name>Heterokonta_Alveolata</name>
665 <name>Alveolata</name>
667 <name>Apicomplexa</name>
669 <name>Aconoidasida</name>
671 <name>Plasmodium</name>
683 <name>Theileria</name>
693 <name>Coccidia</name>
695 <name>Cryptosporidium</name>
709 <name>Ciliophora</name>
719 <name>Heterokonta</name>
721 <scientific_name>Heterokonta</scientific_name>
722 <common_name>Stramenophiles</common_name>
725 <name>Pelagophyceae_Bacillariophyta</name>
727 <name>Bacillariophyta</name>
729 <scientific_name>Bacillariophyta</scientific_name>
730 <common_name>Diatoms</common_name>
744 <name>Oomycetes</name>
762 <name>Archaeplastida</name>
764 <name>Viridiplantae</name>
766 <name>Embryophyta</name>
768 <name>Tracheophyta</name>
770 <name>Magnoliophyta</name>
772 <name>Eudicotyledons</name>
774 <name>Arabidopsis</name>
814 <name>Chlorophyta</name>
816 <name>Prasinophyceae</name>
818 <name>Ostreococcus</name>
830 <name>Micromonas</name>
840 <name>Trebouxiophyceae_Chlorophyceae</name>
842 <name>Chlorophyceae</name>
853 <id type="uniprot">310507</id>
855 <scientific_name>Chlorella sp. NC64A</scientific_name>
867 <name>Excavata</name>
868 <reference doi="10.1038/nature04546"></reference>
870 <name>Kinetoplastida_Heterolobosea</name>
872 <name>Kinetoplastida</name>
885 <name>Metamonada</name>
1183 <name>Bacteria</name>