2 // FORESTER -- software libraries and applications
3 // for evolutionary biology research and applications.
5 // Copyright (C) 2008-2009 Christian M. Zmasek
6 // Copyright (C) 2008-2009 Burnham Institute for Medical Research
9 // This library is free software; you can redistribute it and/or
10 // modify it under the terms of the GNU Lesser General Public
11 // License as published by the Free Software Foundation; either
12 // version 2.1 of the License, or (at your option) any later version.
14 // This library is distributed in the hope that it will be useful,
15 // but WITHOUT ANY WARRANTY; without even the implied warranty of
16 // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
17 // Lesser General Public License for more details.
19 // You should have received a copy of the GNU Lesser General Public
20 // License along with this library; if not, write to the Free Software
21 // Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
23 // Contact: phylosoft @ gmail . com
24 // WWW: https://sites.google.com/site/cmzmasek/home/software/forester
26 package org.forester.io.parsers.phyloxml.data;
28 import java.awt.Color;
30 import org.forester.io.parsers.phyloxml.PhyloXmlDataFormatException;
31 import org.forester.io.parsers.phyloxml.PhyloXmlMapping;
32 import org.forester.io.parsers.phyloxml.XmlElement;
33 import org.forester.phylogeny.data.BranchColor;
34 import org.forester.phylogeny.data.PhylogenyData;
36 public class ColorParser implements PhylogenyDataPhyloXmlParser {
38 private static final PhylogenyDataPhyloXmlParser _instance;
41 _instance = new ColorParser();
43 catch ( final Throwable e ) {
44 throw new RuntimeException( e.getMessage() );
48 private ColorParser() {
52 public PhylogenyData parse( final XmlElement element ) throws PhyloXmlDataFormatException {
56 for( int j = 0; j < element.getNumberOfChildElements(); ++j ) {
57 final XmlElement c = element.getChildElement( j );
58 if ( c.getQualifiedName().equals( PhyloXmlMapping.COLOR_RED ) ) {
59 red = c.getValueAsInt();
61 else if ( c.getQualifiedName().equals( PhyloXmlMapping.COLOR_GREEN ) ) {
62 green = c.getValueAsInt();
64 else if ( c.getQualifiedName().equals( PhyloXmlMapping.COLOR_BLUE ) ) {
65 blue = c.getValueAsInt();
68 final BranchColor color = new BranchColor();
69 color.setValue( new Color( red, green, blue ) );
73 public static PhylogenyDataPhyloXmlParser getInstance() {