forester/phyloxml/docs/version_1.20/phyloxml.indexListcomp.html

   1 <!DOCTYPE html
   2   PUBLIC "-//W3C//DTD XHTML 1.0 Frameset//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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   4    <head>
   5       <meta http-equiv="Content-Type" content="text/html; charset=UTF-8" />
   6       <title>Schema documentation for </title>
   7       <link rel="stylesheet" href="docHtml.css" type="text/css" /><script type="text/javascript">
   8          <!--
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  27         /**
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  47         /**
  48         * Opens a collapseable box.
  49         *
  50         * @param boxObj       Collapseable box
  51         * @param buttonObj Button controlling box
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  53         function openBox(boxObj, buttonObj) {
  54             if (boxObj == null || buttonObj == null) {
  55                 // Box or button not found
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  66
  67         /**
  68         * Closes a collapseable box.
  69         *
  70         * @param boxObj       Collapseable box
  71         * @param buttonObj Button controlling box
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  73         function closeBox(boxObj, buttonObj) {
  74             if (boxObj == null || buttonObj == null) {
  75                 // Box or button not found
  76             } else {
  77                 // Change 'display' CSS property of box
  78                 boxObj.style.display = "none";
  79
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  86
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  97                 buttonObj.value = "+";
  98             }
  99         }
 100
 101         /**
 102         * Closes all boxes in a given list.
 103         *
 104         * @param boxList Array of box IDs
 105         */
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 110                 var buttonObj = getElementObject(button_prefix + boxList[idx]);
 111                 closeBox(boxObj, buttonObj);
 112             }
 113         }
 114
 115         /**
 116         * Open all boxes in a given list.
 117         *
 118         * @param boxList Array of box IDs
 119         */
 120         function expandAll(boxList) {
 121             var idx;
 122             for (idx = 0; idx < boxList.length; idx++) {
 123                 var boxObj = getElementObject(boxList[idx]);
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 125                 openBox(boxObj, buttonObj);
 126             }
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 128
 129         /**
 130          * Update the message presented in the title of the html page.
 131          * - If the documentation was splited by namespace we present something like: "Documentation for namespace 'ns'"
 132          * - If the documentation was splited by location we present somehing like: "Documentation for 'Schema.xsd'"
 133          * - If no split we always present: "Documentation for 'MainSchema.xsd'"
 134          */
 135         function updatePageTitle(message) {
 136             top.document.title = message;
 137         }
 138
 139
 140
 141          /**
 142           * Finds an HTML element by its ID and makes it floatable over the normal content.
 143           *
 144           * @param x_displacement The difference in pixels to the right side of the window from
 145           *           the left side of the element.
 146           * @param y_displacement The difference in pixels to the right side of the window from
 147           *           the top of the element.
 148           */
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 150
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 152
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 164
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 167
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 169                if( typeof( window.innerWidth ) == 'number' ) {
 170                   //Non-IE
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 174                   //IE 6+ in 'standards compliant mode'
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 176                   myHeight = document.documentElement.clientHeight;
 177                } else if( document.body && ( document.body.clientWidth || document.body.clientHeight ) ) {
 178                   //IE 4 compatible
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 181                }
 182
 183
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 187                y = ns ? pageYOffset : document.documentElement && document.documentElement.scrollTop ?
 188                   document.documentElement.scrollTop : document.body.scrollTop;
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 207
 208          /**
 209           * Finds an HTML element by its ID and makes it floatable over the normal content.
 210           *
 211           * @param x_displacement The difference in pixels to the right side of the window from
 212           *           the left side of the element.
 213           * @param y_displacement The difference in pixels to the right side of the window from
 214           *           the top of the element.
 215           */
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 217
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 237
 238
 239
 240                         //--></script></head>
 241    <body>
 242       <h2><a id="INDEX">Table of Contents</a></h2>
 243       <div class="toc">
 244          <form action="none">
 245             <div><span> Group by: <select id="selectTOC" onchange="selectTOCGroupBy(this.options[this.selectedIndex].value, true, 'phyloxml.indexList.html', 'phyloxml.indexListns.html', 'phyloxml.indexListcomp.html');">
 246                      <option value="toc_group_by_namespace">Namespace</option>
 247                      <option value="toc_group_by_location">Location</option>
 248                      <option value="toc_group_by_component_type" selected="selected">Component Type</option></select></span></div>
 249          </form>
 250          <div class="level1" id="toc_group_by_component_type" style="display:block">
 251             <div>
 252                <div class="horizontalLayout">
 253                   <table class="rt">
 254                      <tr>
 255                         <td class="rt_cornerTopLeft"></td>
 256                         <td class="rt_lineTop"></td>
 257                         <td class="rt_cornerTopRight"></td>
 258                      </tr>
 259                      <tr>
 260                         <td class="rt_lineLeft"></td>
 261                         <td class="rt_content">
 262                            <table class="componentGroup">
 263                               <tbody>
 264                                  <tr>
 265                                     <td class="componentGroup"><input id="button_Element" type="image" value="-" src="img/btM.gif" onclick="switchState('Element');" class="control" /></td>
 266                                     <td class="componentGroup">
 267                                        <div class="componentGroupTitle">Elements</div>
 268                                     </td>
 269                                  </tr>
 270                                  <tr>
 271                                     <td class="componentGroup"></td>
 272                                     <td class="componentGroup">
 273                                        <div id="Element" class="componentGroup" style="display:block">
 274                                           <div><b><a href="phyloxml_xsd.html#phyloxml" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:phyloxml</a></b></div>
 275                                        </div>
 276                                     </td>
 277                                  </tr>
 278                               </tbody>
 279                            </table>
 280                         </td>
 281                         <td class="rt_lineRight"></td>
 282                      </tr>
 283                      <tr>
 284                         <td class="rt_cornerBottomLeft"></td>
 285                         <td class="rt_lineBottom"></td>
 286                         <td class="rt_cornerBottomRight"></td>
 287                      </tr>
 288                   </table>
 289                </div>
 290                <div class="horizontalLayout">
 291                   <table class="rt">
 292                      <tr>
 293                         <td class="rt_cornerTopLeft"></td>
 294                         <td class="rt_lineTop"></td>
 295                         <td class="rt_cornerTopRight"></td>
 296                      </tr>
 297                      <tr>
 298                         <td class="rt_lineLeft"></td>
 299                         <td class="rt_content">
 300                            <table class="componentGroup">
 301                               <tbody>
 302                                  <tr>
 303                                     <td class="componentGroup"><input id="button_Complex_Type" type="image" value="-" src="img/btM.gif" onclick="switchState('Complex_Type');" class="control" /></td>
 304                                     <td class="componentGroup">
 305                                        <div class="componentGroupTitle">Complex Types</div>
 306                                     </td>
 307                                  </tr>
 308                                  <tr>
 309                                     <td class="componentGroup"></td>
 310                                     <td class="componentGroup">
 311                                        <div id="Complex_Type" class="componentGroup" style="display:block">
 312                                           <div><b><a href="phyloxml_xsd.html#Accession" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Accession</a></b></div>
 313                                           <div><b><a href="phyloxml_xsd.html#Annotation" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Annotation</a></b></div>
 314                                           <div><b><a href="phyloxml_xsd.html#BinaryCharacterList" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:BinaryCharacterList</a></b></div>
 315                                           <div><b><a href="phyloxml_xsd.html#BinaryCharacters" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:BinaryCharacters</a></b></div>
 316                                           <div><b><a href="phyloxml_xsd.html#BranchColor" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:BranchColor</a></b></div>
 317                                           <div><b><a href="phyloxml_xsd.html#Clade" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Clade</a></b></div>
 318                                           <div><b><a href="phyloxml_xsd.html#CladeRelation" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:CladeRelation</a></b></div>
 319                                           <div><b><a href="phyloxml_xsd.html#Confidence" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Confidence</a></b></div>
 320                                           <div><b><a href="phyloxml_xsd.html#CrossReferences" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:CrossReferences</a></b></div>
 321                                           <div><b><a href="phyloxml_xsd.html#Date" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Date</a></b></div>
 322                                           <div><b><a href="phyloxml_xsd.html#Distribution" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Distribution</a></b></div>
 323                                           <div><b><a href="phyloxml_xsd.html#DomainArchitecture" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:DomainArchitecture</a></b></div>
 324                                           <div><b><a href="phyloxml_xsd.html#Events" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Events</a></b></div>
 325                                           <div><b><a href="phyloxml_xsd.html#Id" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Id</a></b></div>
 326                                           <div><b><a href="phyloxml_xsd.html#MolSeq" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:MolSeq</a></b></div>
 327                                           <div><b><a href="phyloxml_xsd.html#Phylogeny" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Phylogeny</a></b></div>
 328                                           <div><b><a href="phyloxml_xsd.html#http___www.phyloxml.org_Phyloxml" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Phyloxml</a></b></div>
 329                                           <div><b><a href="phyloxml_xsd.html#Point" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Point</a></b></div>
 330                                           <div><b><a href="phyloxml_xsd.html#Polygon" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Polygon</a></b></div>
 331                                           <div><b><a href="phyloxml_xsd.html#Property" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Property</a></b></div>
 332                                           <div><b><a href="phyloxml_xsd.html#ProteinDomain" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:ProteinDomain</a></b></div>
 333                                           <div><b><a href="phyloxml_xsd.html#Reference" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Reference</a></b></div>
 334                                           <div><b><a href="phyloxml_xsd.html#Sequence" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Sequence</a></b></div>
 335                                           <div><b><a href="phyloxml_xsd.html#SequenceRelation" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:SequenceRelation</a></b></div>
 336                                           <div><b><a href="phyloxml_xsd.html#Taxonomy" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Taxonomy</a></b></div>
 337                                           <div><b><a href="phyloxml_xsd.html#Uri" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Uri</a></b></div>
 338                                        </div>
 339                                     </td>
 340                                  </tr>
 341                               </tbody>
 342                            </table>
 343                         </td>
 344                         <td class="rt_lineRight"></td>
 345                      </tr>
 346                      <tr>
 347                         <td class="rt_cornerBottomLeft"></td>
 348                         <td class="rt_lineBottom"></td>
 349                         <td class="rt_cornerBottomRight"></td>
 350                      </tr>
 351                   </table>
 352                </div>
 353                <div class="horizontalLayout">
 354                   <table class="rt">
 355                      <tr>
 356                         <td class="rt_cornerTopLeft"></td>
 357                         <td class="rt_lineTop"></td>
 358                         <td class="rt_cornerTopRight"></td>
 359                      </tr>
 360                      <tr>
 361                         <td class="rt_lineLeft"></td>
 362                         <td class="rt_content">
 363                            <table class="componentGroup">
 364                               <tbody>
 365                                  <tr>
 366                                     <td class="componentGroup"><input id="button_Simple_Type" type="image" value="-" src="img/btM.gif" onclick="switchState('Simple_Type');" class="control" /></td>
 367                                     <td class="componentGroup">
 368                                        <div class="componentGroupTitle">Simple Types</div>
 369                                     </td>
 370                                  </tr>
 371                                  <tr>
 372                                     <td class="componentGroup"></td>
 373                                     <td class="componentGroup">
 374                                        <div id="Simple_Type" class="componentGroup" style="display:block">
 375                                           <div><b><a href="phyloxml_xsd.html#AppliesTo" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:AppliesTo</a></b></div>
 376                                           <div><b><a href="phyloxml_xsd.html#EventType" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:EventType</a></b></div>
 377                                           <div><b><a href="phyloxml_xsd.html#PropertyDataType" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:PropertyDataType</a></b></div>
 378                                           <div><b><a href="phyloxml_xsd.html#Rank" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:Rank</a></b></div>
 379                                           <div><b><a href="phyloxml_xsd.html#SequenceRelationType" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:SequenceRelationType</a></b></div>
 380                                           <div><b><a href="phyloxml_xsd.html#SequenceSymbol" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:SequenceSymbol</a></b></div>
 381                                           <div><b><a href="phyloxml_xsd.html#SequenceType" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:SequenceType</a></b></div>
 382                                           <div><b><a href="phyloxml_xsd.html#TaxonomyCode" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:TaxonomyCode</a></b></div>
 383                                           <div><b><a href="phyloxml_xsd.html#id_ref" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:id_ref</a></b></div>
 384                                           <div><b><a href="phyloxml_xsd.html#id_source" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:id_source</a></b></div>
 385                                           <div><b><a href="phyloxml_xsd.html#ref" target="mainFrame" title="http://www.phyloxml.org" onclick="updatePageTitle('Schema documentation for phyloxml.xsd')">phy:ref</a></b></div>
 386                                        </div>
 387                                     </td>
 388                                  </tr>
 389                               </tbody>
 390                            </table>
 391                         </td>
 392                         <td class="rt_lineRight"></td>
 393                      </tr>
 394                      <tr>
 395                         <td class="rt_cornerBottomLeft"></td>
 396                         <td class="rt_lineBottom"></td>
 397                         <td class="rt_cornerBottomRight"></td>
 398                      </tr>
 399                   </table>
 400                </div>
 401                <div style="clear:left"></div>
 402             </div>
 403          </div>
 404       </div>
 405       <div class="footer">
 406          <hr />
 407          <div align="center">
 408          </div>
 409       </div>
 410    </body>
 411 </html>