forester/test_data/gsdi_test_gene_tree_sn_wnt.xml

   1 <?xml version="1.0" encoding="UTF-8"?>
   2 <phyloxml xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.phyloxml.org http://www.phyloxml.org/1.10/phyloxml.xsd" xmlns="http://www.phyloxml.org">
   3 <phylogeny rooted="false">
   4   <clade>
   5     <clade>
   6       <name>ref_XP_002434188_1_mites___ticks_</name>
   7       <branch_length>0.436934</branch_length>
   8       <taxonomy>
   9         <scientific_name>Ixodes scapularis</scientific_name>
  10       </taxonomy>
  11       <sequence>
  12         <accession source="refseq">XP_002434188</accession>
  13         <name>AmphiWnt4, putative</name>
  14       </sequence>
  15     </clade>
  16     <clade>
  17       <branch_length>0.0</branch_length>
  18       <clade>
  19         <name>segmented_worms</name>
  20         <branch_length>0.0977774</branch_length>
  21         <clade>
  22           <name>gb_ADF31344_1_segmented_worms_</name>
  23           <branch_length>0.342506</branch_length>
  24           <taxonomy>
  25             <scientific_name>Perionyx excavatus</scientific_name>
  26           </taxonomy>
  27           <sequence>
  28             <accession source="ncbi">GU938470.1</accession>
  29             <name>Perionyx excavatus WNT11</name>
  30           </sequence>
  31         </clade>
  32         <clade>
  33           <name>gb_ADK38674_2_segmented_worms_</name>
  34           <branch_length>0.331094</branch_length>
  35           <taxonomy>
  36             <scientific_name>Platynereis dumerilii</scientific_name>
  37           </taxonomy>
  38           <sequence>
  39             <accession source="ncbi">HM179276.2</accession>
  40             <name>Platynereis dumerilii (Dumeril&apos;s clam worm) Wnt11</name>
  41           </sequence>
  42         </clade>
  43       </clade>
  44       <clade>
  45         <branch_length>0.0810781</branch_length>
  46         <clade>
  47           <branch_length>0.0127274</branch_length>
  48           <clade>
  49             <name>ref_NP_001161493_1_hemichordates_</name>
  50             <branch_length>0.366952</branch_length>
  51             <taxonomy>
  52               <scientific_name>Saccoglossus kowalevskii</scientific_name>
  53             </taxonomy>
  54             <sequence>
  55               <accession source="refseq">NP_001161493</accession>
  56               <name>wingless-type MMTV integration site family, member 11 precursor</name>
  57             </sequence>
  58           </clade>
  59           <clade>
  60             <branch_length>0.14851</branch_length>
  61             <clade>
  62               <branch_length>0.101195</branch_length>
  63               <clade>
  64                 <branch_length>0.0254976</branch_length>
  65                 <clade>
  66                   <name>hemichordates</name>
  67                   <branch_length>0.164216</branch_length>
  68                   <clade>
  69                     <name>ref_XP_002737259_1_hemichordates_</name>
  70                     <branch_length>0.0123794</branch_length>
  71                     <taxonomy>
  72                       <scientific_name>Saccoglossus kowalevskii</scientific_name>
  73                     </taxonomy>
  74                     <sequence>
  75                       <accession source="refseq">XP_002737259</accession>
  76                       <name>PREDICTED: wingless-type MMTV integration site family member 4</name>
  77                     </sequence>
  78                   </clade>
  79                   <clade>
  80                     <name>gb_ADB22653_1_hemichordates_</name>
  81                     <branch_length>0.0</branch_length>
  82                     <taxonomy>
  83                       <scientific_name>Saccoglossus kowalevskii</scientific_name>
  84                     </taxonomy>
  85                     <sequence>
  86                       <accession source="ncbi">GU224244.1</accession>
  87                       <name>Saccoglossus kowalevskii partial wingless-type MMTV integration site family</name>
  88                     </sequence>
  89                   </clade>
  90                 </clade>
  91                 <clade>
  92                   <branch_length>0.0284849</branch_length>
  93                   <clade>
  94                     <branch_length>0.116947</branch_length>
  95                     <clade>
  96                       <branch_length>0.00640349</branch_length>
  97                       <clade>
  98                         <branch_length>0.022288</branch_length>
  99                         <clade>
 100                           <name>frogs___toads</name>
 101                           <branch_length>0.0144378</branch_length>
 102                           <clade>
 103                             <name>dbj_BAE16611_1_frogs___toads_</name>
 104                             <branch_length>0.00998333</branch_length>
 105                             <taxonomy>
 106                               <scientific_name>Rana rugosa</scientific_name>
 107                             </taxonomy>
 108                             <sequence>
 109                               <accession source="ncbi">AB204854.1</accession>
 110                               <name>Rana rugosa Wnt-4 protein</name>
 111                             </sequence>
 112                           </clade>
 113                           <clade>
 114                             <branch_length>0.00869688</branch_length>
 115                             <clade>
 116                               <branch_length>0.00400211</branch_length>
 117                               <clade>
 118                                 <name>ref_NP_001239014_1_frogs___toads_</name>
 119                                 <branch_length>0.00252727</branch_length>
 120                                 <taxonomy>
 121                                   <scientific_name>Xenopus laevis</scientific_name>
 122                                 </taxonomy>
 123                                 <sequence>
 124                                   <accession source="refseq">NP_001239014</accession>
 125                                   <name>protein Wnt-4 isoform 2 precursor</name>
 126                                 </sequence>
 127                               </clade>
 128                               <clade>
 129                                 <name>ref_NP_001081197_1_frogs___toads_</name>
 130                                 <branch_length>0.00668951</branch_length>
 131                                 <taxonomy>
 132                                   <scientific_name>Xenopus laevis</scientific_name>
 133                                 </taxonomy>
 134                                 <sequence>
 135                                   <accession source="refseq">NP_001081197 NP_001081198</accession>
 136                                   <name>protein Wnt-4 isoform 1</name>
 137                                 </sequence>
 138                               </clade>
 139                             </clade>
 140                             <clade>
 141                               <name>ref_NP_001239015_1_frogs___toads_</name>
 142                               <branch_length>0.0145957</branch_length>
 143                               <taxonomy>
 144                                 <scientific_name>Xenopus</scientific_name>
 145                               </taxonomy>
 146                               <sequence>
 147                                 <accession source="refseq">NP_001239015 XP_002937081</accession>
 148                                 <name>protein Wnt-4 precursor</name>
 149                               </sequence>
 150                             </clade>
 151                           </clade>
 152                         </clade>
 153                         <clade>
 154                           <name>birds</name>
 155                           <branch_length>0.0458081</branch_length>
 156                           <clade>
 157                             <branch_length>0.00212171</branch_length>
 158                             <clade>
 159                               <name>ref_XP_002194190_1_birds_</name>
 160                               <branch_length>0.0</branch_length>
 161                               <taxonomy>
 162                                 <scientific_name>Taeniopygia guttata</scientific_name>
 163                               </taxonomy>
 164                               <sequence>
 165                                 <accession source="refseq">XP_002194190</accession>
 166                                 <name>PREDICTED: wingless-type MMTV integration site family, member 4</name>
 167                               </sequence>
 168                             </clade>
 169                             <clade>
 170                               <name>ref_XP_003212403_1_birds_</name>
 171                               <branch_length>0.00758143</branch_length>
 172                               <taxonomy>
 173                                 <scientific_name>Meleagris gallopavo</scientific_name>
 174                               </taxonomy>
 175                               <sequence>
 176                                 <accession source="refseq">XP_003212403</accession>
 177                                 <name>PREDICTED: protein Wnt-4-like</name>
 178                               </sequence>
 179                             </clade>
 180                           </clade>
 181                           <clade>
 182                             <name>ref_NP_990114_1_birds_</name>
 183                             <branch_length>0.00699759</branch_length>
 184                             <taxonomy>
 185                               <scientific_name>Gallus gallus</scientific_name>
 186                             </taxonomy>
 187                             <sequence>
 188                               <accession source="refseq">NP_990114</accession>
 189                               <name>protein Wnt-4 precursor</name>
 190                             </sequence>
 191                           </clade>
 192                         </clade>
 193                       </clade>
 194                       <clade>
 195                         <branch_length>0.0327454</branch_length>
 196                         <clade>
 197                           <name>marsupials</name>
 198                           <branch_length>0.0220392</branch_length>
 199                           <clade>
 200                             <name>gb_AAY18780_1_marsupials_</name>
 201                             <branch_length>0.00829078</branch_length>
 202                             <taxonomy>
 203                               <scientific_name>Macropus eugenii</scientific_name>
 204                             </taxonomy>
 205                             <sequence>
 206                               <accession source="ncbi">AY940685.1</accession>
 207                               <name>Macropus eugenii (tammar wallaby) wingless-related MMTV integration site 4</name>
 208                             </sequence>
 209                           </clade>
 210                           <clade>
 211                             <name>ref_XP_001376793_2_marsupials_</name>
 212                             <branch_length>0.00731079</branch_length>
 213                             <taxonomy>
 214                               <scientific_name>Monodelphis domestica</scientific_name>
 215                             </taxonomy>
 216                             <sequence>
 217                               <accession source="refseq">XP_001376793</accession>
 218                               <name>PREDICTED: protein Wnt-4-like</name>
 219                             </sequence>
 220                           </clade>
 221                         </clade>
 222                         <clade>
 223                           <branch_length>0.0422827</branch_length>
 224                           <clade>
 225                             <name>ref_XP_002919583_1_carnivores_</name>
 226                             <branch_length>0.00681767</branch_length>
 227                             <taxonomy>
 228                               <scientific_name>Ailuropoda melanoleuca</scientific_name>
 229                             </taxonomy>
 230                             <sequence>
 231                               <accession source="refseq">XP_002919583</accession>
 232                               <name>PREDICTED: LOW QUALITY PROTEIN: protein Wnt-4-like</name>
 233                             </sequence>
 234                           </clade>
 235                           <clade>
 236                             <branch_length>0.00249228</branch_length>
 237                             <clade>
 238                               <name>ref_XP_002750404_1_primates_</name>
 239                               <branch_length>0.00517047</branch_length>
 240                               <taxonomy>
 241                                 <scientific_name>Callithrix jacchus</scientific_name>
 242                               </taxonomy>
 243                               <sequence>
 244                                 <accession source="refseq">XP_002750404</accession>
 245                                 <name>PREDICTED: protein Wnt-4-like</name>
 246                               </sequence>
 247                             </clade>
 248                             <clade>
 249                               <branch_length>6.4578E-4</branch_length>
 250                               <clade>
 251                                 <branch_length>9.93478E-4</branch_length>
 252                                 <clade>
 253                                   <branch_length>5.01604E-4</branch_length>
 254                                   <clade>
 255                                     <branch_length>0.00125419</branch_length>
 256                                     <clade>
 257                                       <branch_length>0.00119591</branch_length>
 258                                       <clade>
 259                                         <name>ref_XP_003581950_1_even_toed_ungulates_</name>
 260                                         <branch_length>0.02026</branch_length>
 261                                         <taxonomy>
 262                                           <scientific_name>Bos taurus</scientific_name>
 263                                         </taxonomy>
 264                                         <sequence>
 265                                           <accession source="refseq">XP_003581950</accession>
 266                                           <name>PREDICTED: protein Wnt-4-like</name>
 267                                         </sequence>
 268                                       </clade>
 269                                       <clade>
 270                                         <name>ref_XP_001501560_2_odd_toed_ungulates_</name>
 271                                         <branch_length>0.0</branch_length>
 272                                         <taxonomy>
 273                                           <scientific_name>Equus caballus</scientific_name>
 274                                         </taxonomy>
 275                                         <sequence>
 276                                           <accession source="refseq">XP_001501560</accession>
 277                                           <name>PREDICTED: protein Wnt-4</name>
 278                                         </sequence>
 279                                       </clade>
 280                                     </clade>
 281                                     <clade>
 282                                       <name>gb_AFH66793_1_even_toed_ungulates_</name>
 283                                       <branch_length>2.77911E-4</branch_length>
 284                                       <taxonomy>
 285                                         <scientific_name>Bubalus bubalis</scientific_name>
 286                                       </taxonomy>
 287                                       <sequence>
 288                                         <accession source="ncbi">JQ326275.1</accession>
 289                                         <name>Bubalus bubalis (water buffalo) WNT4</name>
 290                                       </sequence>
 291                                     </clade>
 292                                   </clade>
 293                                   <clade>
 294                                     <branch_length>0.00574521</branch_length>
 295                                     <clade>
 296                                       <branch_length>0.00724651</branch_length>
 297                                       <clade>
 298                                         <name>ref_XP_002716079_1_rabbits___hares_</name>
 299                                         <branch_length>0.0359451</branch_length>
 300                                         <taxonomy>
 301                                           <scientific_name>Oryctolagus cuniculus</scientific_name>
 302                                         </taxonomy>
 303                                         <sequence>
 304                                           <accession source="refseq">XP_002716079</accession>
 305                                           <name>PREDICTED: wingless-type MMTV integration site family, member 4</name>
 306                                         </sequence>
 307                                       </clade>
 308                                       <clade>
 309                                         <name>ref_XP_002802264_1_primates_</name>
 310                                         <branch_length>0.0</branch_length>
 311                                         <taxonomy>
 312                                           <scientific_name>Macaca mulatta</scientific_name>
 313                                         </taxonomy>
 314                                         <sequence>
 315                                           <accession source="refseq">XP_002802264</accession>
 316                                           <name>PREDICTED: protein Wnt-4 isoform 2</name>
 317                                         </sequence>
 318                                       </clade>
 319                                     </clade>
 320                                     <clade>
 321                                       <name>ref_XP_003585839_1_even_toed_ungulates_</name>
 322                                       <branch_length>0.0</branch_length>
 323                                       <taxonomy>
 324                                         <scientific_name>Bos taurus</scientific_name>
 325                                       </taxonomy>
 326                                       <sequence>
 327                                         <accession source="refseq">XP_003585839</accession>
 328                                         <name>PREDICTED: protein Wnt-4-like</name>
 329                                       </sequence>
 330                                     </clade>
 331                                   </clade>
 332                                 </clade>
 333                                 <clade>
 334                                   <name>rodents</name>
 335                                   <branch_length>0.00522595</branch_length>
 336                                   <clade>
 337                                     <name>gb_EHB08913_1_rodents_</name>
 338                                     <branch_length>0.013784</branch_length>
 339                                     <taxonomy>
 340                                       <scientific_name>Heterocephalus glaber</scientific_name>
 341                                     </taxonomy>
 342                                     <sequence>
 343                                       <accession source="ncbi">JH170405.1</accession>
 344                                       <name>Heterocephalus glaber (naked mole-rat) Protein Wnt-4</name>
 345                                     </sequence>
 346                                   </clade>
 347                                   <clade>
 348                                     <name>ref_XP_003471186_1_rodents_</name>
 349                                     <branch_length>0.0</branch_length>
 350                                     <taxonomy>
 351                                       <scientific_name>Cavia porcellus</scientific_name>
 352                                     </taxonomy>
 353                                     <sequence>
 354                                       <accession source="refseq">XP_003471186</accession>
 355                                       <name>PREDICTED: protein Wnt-4-like</name>
 356                                     </sequence>
 357                                   </clade>
 358                                 </clade>
 359                               </clade>
 360                               <clade>
 361                                 <branch_length>9.314E-4</branch_length>
 362                                 <clade>
 363                                   <name>gb_EHH14426_1_primates_</name>
 364                                   <branch_length>0.0</branch_length>
 365                                   <taxonomy>
 366                                     <scientific_name>Macaca mulatta</scientific_name>
 367                                   </taxonomy>
 368                                   <sequence>
 369                                     <accession source="ncbi">CM001253.1</accession>
 370                                     <name>Macaca mulatta (Rhesus monkey) partial hypothetical protein</name>
 371                                   </sequence>
 372                                 </clade>
 373                                 <clade>
 374                                   <branch_length>9.20304E-4</branch_length>
 375                                   <clade>
 376                                     <name>primates</name>
 377                                     <branch_length>4.4792E-4</branch_length>
 378                                     <clade>
 379                                       <branch_length>1.50754E-4</branch_length>
 380                                       <clade>
 381                                         <name>dbj_BAC23080_1_primates_</name>
 382                                         <branch_length>0.00282125</branch_length>
 383                                         <taxonomy>
 384                                           <scientific_name>Homo sapiens</scientific_name>
 385                                         </taxonomy>
 386                                         <sequence>
 387                                           <accession source="ncbi">AB061675.1</accession>
 388                                           <name>Homo sapiens (human) WNT4</name>
 389                                         </sequence>
 390                                       </clade>
 391                                       <clade>
 392                                         <name>gb_AAG38658_1_primates_</name>
 393                                         <branch_length>0.005812</branch_length>
 394                                         <taxonomy>
 395                                           <scientific_name>Homo sapiens</scientific_name>
 396                                         </taxonomy>
 397                                         <sequence>
 398                                           <accession source="ncbi">AY009398.1</accession>
 399                                           <name>Homo sapiens (human) WNT4 precursor</name>
 400                                         </sequence>
 401                                       </clade>
 402                                     </clade>
 403                                     <clade>
 404                                       <name>ref_NP_110388_2_primates_</name>
 405                                       <branch_length>0.0</branch_length>
 406                                       <taxonomy>
 407                                         <scientific_name>Homo sapiens</scientific_name>
 408                                       </taxonomy>
 409                                       <sequence>
 410                                         <accession source="refseq">NP_110388</accession>
 411                                         <name>protein Wnt-4 precursor</name>
 412                                       </sequence>
 413                                     </clade>
 414                                   </clade>
 415                                   <clade>
 416                                     <name>rodents</name>
 417                                     <branch_length>0.00846645</branch_length>
 418                                     <clade>
 419                                       <branch_length>1.70192E-4</branch_length>
 420                                       <clade>
 421                                         <name>ref_NP_033549_1_rodents_</name>
 422                                         <branch_length>0.00262035</branch_length>
 423                                         <taxonomy>
 424                                           <scientific_name>Mus musculus</scientific_name>
 425                                         </taxonomy>
 426                                         <sequence>
 427                                           <accession source="refseq">NP_033549</accession>
 428                                           <name>protein Wnt-4 precursor</name>
 429                                         </sequence>
 430                                       </clade>
 431                                       <clade>
 432                                         <branch_length>0.00602544</branch_length>
 433                                         <clade>
 434                                           <name>gb_AAH98752_1_rodents_</name>
 435                                           <branch_length>0.0</branch_length>
 436                                           <taxonomy>
 437                                             <scientific_name>Rattus norvegicus</scientific_name>
 438                                           </taxonomy>
 439                                           <sequence>
 440                                             <accession source="ncbi">BC098752.1</accession>
 441                                             <name>Rattus norvegicus (Norway rat) wingless-type MMTV integration site family,</name>
 442                                           </sequence>
 443                                         </clade>
 444                                         <clade>
 445                                           <name>ref_NP_445854_1_rodents_</name>
 446                                           <branch_length>0.00292772</branch_length>
 447                                           <taxonomy>
 448                                             <scientific_name>Rattus norvegicus</scientific_name>
 449                                           </taxonomy>
 450                                           <sequence>
 451                                             <accession source="refseq">NP_445854</accession>
 452                                             <name>protein Wnt-4 precursor</name>
 453                                           </sequence>
 454                                         </clade>
 455                                       </clade>
 456                                     </clade>
 457                                     <clade>
 458                                       <name>ref_XP_003503693_1_rodents_</name>
 459                                       <branch_length>0.0033169</branch_length>
 460                                       <taxonomy>
 461                                         <scientific_name>Cricetulus griseus</scientific_name>
 462                                       </taxonomy>
 463                                       <sequence>
 464                                         <accession source="refseq">XP_003503693</accession>
 465                                         <name>PREDICTED: protein Wnt-4-like</name>
 466                                       </sequence>
 467                                     </clade>
 468                                   </clade>
 469                                 </clade>
 470                               </clade>
 471                             </clade>
 472                           </clade>
 473                         </clade>
 474                       </clade>
 475                     </clade>
 476                     <clade>
 477                       <name>bony_fishes</name>
 478                       <branch_length>0.0459602</branch_length>
 479                       <clade>
 480                         <branch_length>0.0244715</branch_length>
 481                         <clade>
 482                           <branch_length>0.0102135</branch_length>
 483                           <clade>
 484                             <branch_length>0.00313174</branch_length>
 485                             <clade>
 486                               <name>ref_XP_003442666_1_bony_fishes_</name>
 487                               <branch_length>0.00605392</branch_length>
 488                               <taxonomy>
 489                                 <scientific_name>Oreochromis niloticus</scientific_name>
 490                               </taxonomy>
 491                               <sequence>
 492                                 <accession source="refseq">XP_003442666</accession>
 493                                 <name>PREDICTED: protein Wnt-4a-like</name>
 494                               </sequence>
 495                             </clade>
 496                             <clade>
 497                               <name>emb_CAF96944_1_bony_fishes_</name>
 498                               <branch_length>0.0253017</branch_length>
 499                               <taxonomy>
 500                                 <scientific_name>Tetraodon nigroviridis</scientific_name>
 501                               </taxonomy>
 502                               <sequence>
 503                                 <accession source="ncbi">CAAE01014528.1</accession>
 504                                 <name>Tetraodon nigroviridis hypothetical protein</name>
 505                               </sequence>
 506                             </clade>
 507                           </clade>
 508                           <clade>
 509                             <branch_length>0.00109057</branch_length>
 510                             <clade>
 511                               <name>emb_CBN80604_1_bony_fishes_</name>
 512                               <branch_length>0.00582779</branch_length>
 513                               <taxonomy>
 514                                 <scientific_name>Dicentrarchus labrax</scientific_name>
 515                               </taxonomy>
 516                               <sequence>
 517                                 <accession source="ncbi">FQ310506.3</accession>
 518                                 <name>Dicentrarchus labrax (European seabass) Protein Wnt</name>
 519                               </sequence>
 520                             </clade>
 521                             <clade>
 522                               <name>ref_NP_001153911_1_bony_fishes_</name>
 523                               <branch_length>0.0346242</branch_length>
 524                               <taxonomy>
 525                                 <scientific_name>Oryzias latipes</scientific_name>
 526                               </taxonomy>
 527                               <sequence>
 528                                 <accession source="refseq">NP_001153911</accession>
 529                                 <name>wingless-type MMTV integration site family member 4a precursor</name>
 530                               </sequence>
 531                             </clade>
 532                           </clade>
 533                         </clade>
 534                         <clade>
 535                           <branch_length>0.00334737</branch_length>
 536                           <clade>
 537                             <name>gb_AER52059_1_bony_fishes_</name>
 538                             <branch_length>0.0193135</branch_length>
 539                             <taxonomy>
 540                               <scientific_name>Oncorhynchus mykiss</scientific_name>
 541                             </taxonomy>
 542                             <sequence>
 543                               <accession source="ncbi">JF815553.1</accession>
 544                               <name>Oncorhynchus mykiss (rainbow trout) wingless-type MMTV integration site</name>
 545                             </sequence>
 546                           </clade>
 547                           <clade>
 548                             <name>gb_AER52060_1_bony_fishes_</name>
 549                             <branch_length>0.0116537</branch_length>
 550                             <taxonomy>
 551                               <scientific_name>Oncorhynchus mykiss</scientific_name>
 552                             </taxonomy>
 553                             <sequence>
 554                               <accession source="ncbi">JF815554.1</accession>
 555                               <name>Oncorhynchus mykiss (rainbow trout) wingless-type MMTV integration site</name>
 556                             </sequence>
 557                           </clade>
 558                         </clade>
 559                       </clade>
 560                       <clade>
 561                         <branch_length>0.0503382</branch_length>
 562                         <clade>
 563                           <name>ref_NP_001035477_1_bony_fishes_</name>
 564                           <branch_length>0.00103857</branch_length>
 565                           <taxonomy>
 566                             <scientific_name>Danio rerio</scientific_name>
 567                           </taxonomy>
 568                           <sequence>
 569                             <accession source="refseq">NP_001035477 NP_571022</accession>
 570                             <name>protein Wnt-4a precursor</name>
 571                           </sequence>
 572                         </clade>
 573                         <clade>
 574                           <name>gb_AAA96518_1_bony_fishes_</name>
 575                           <branch_length>0.00777218</branch_length>
 576                           <taxonomy>
 577                             <scientific_name>Danio rerio</scientific_name>
 578                           </taxonomy>
 579                           <sequence>
 580                             <accession source="ncbi">U51267.1</accession>
 581                             <name>Danio rerio (zebrafish) Wnt4</name>
 582                           </sequence>
 583                         </clade>
 584                       </clade>
 585                     </clade>
 586                   </clade>
 587                   <clade>
 588                     <name>lancelets</name>
 589                     <branch_length>0.183281</branch_length>
 590                     <clade>
 591                       <name>ref_XP_002613927_1_lancelets_</name>
 592                       <branch_length>3.2603E-4</branch_length>
 593                       <taxonomy>
 594                         <scientific_name>Branchiostoma floridae</scientific_name>
 595                       </taxonomy>
 596                       <sequence>
 597                         <accession source="refseq">XP_002613927</accession>
 598                         <name>hypothetical protein BRAFLDRAFT_56711</name>
 599                       </sequence>
 600                     </clade>
 601                     <clade>
 602                       <name>gb_AAC80431_1_lancelets_</name>
 603                       <branch_length>0.0111029</branch_length>
 604                       <taxonomy>
 605                         <scientific_name>Branchiostoma floridae</scientific_name>
 606                       </taxonomy>
 607                       <sequence>
 608                         <accession source="ncbi">AF061973.1</accession>
 609                         <name>Branchiostoma floridae (Florida lancelet) AmphiWnt4</name>
 610                       </sequence>
 611                     </clade>
 612                   </clade>
 613                 </clade>
 614               </clade>
 615               <clade>
 616                 <branch_length>0.0261016</branch_length>
 617                 <clade>
 618                   <branch_length>0.02683</branch_length>
 619                   <clade>
 620                     <name>emb_CAD37166_2_segmented_worms_</name>
 621                     <branch_length>0.206153</branch_length>
 622                     <taxonomy>
 623                       <scientific_name>Platynereis dumerilii</scientific_name>
 624                     </taxonomy>
 625                     <sequence>
 626                       <accession source="ncbi">AJ491798.2</accession>
 627                       <name>Platynereis dumerilii (Dumeril&apos;s clam worm) Wnt4 protein</name>
 628                     </sequence>
 629                   </clade>
 630                   <clade>
 631                     <name>gb_ABD16196_1_cephalopods_</name>
 632                     <branch_length>0.304059</branch_length>
 633                     <taxonomy>
 634                       <scientific_name>Euprymna scolopes</scientific_name>
 635                     </taxonomy>
 636                     <sequence>
 637                       <accession source="ncbi">DQ351545.1</accession>
 638                       <name>Euprymna scolopes Wnt4</name>
 639                     </sequence>
 640                   </clade>
 641                 </clade>
 642                 <clade>
 643                   <name>gb_ADF31339_1_segmented_worms_</name>
 644                   <branch_length>0.290633</branch_length>
 645                   <taxonomy>
 646                     <scientific_name>Perionyx excavatus</scientific_name>
 647                   </taxonomy>
 648                   <sequence>
 649                     <accession source="ncbi">GU938465.1</accession>
 650                     <name>Perionyx excavatus WNT4a</name>
 651                   </sequence>
 652                 </clade>
 653               </clade>
 654             </clade>
 655             <clade>
 656               <name>ref_XP_003448336_1_bony_fishes_</name>
 657               <branch_length>0.402974</branch_length>
 658               <taxonomy>
 659                 <scientific_name>Oreochromis niloticus</scientific_name>
 660               </taxonomy>
 661               <sequence>
 662                 <accession source="refseq">XP_003448336</accession>
 663                 <name>PREDICTED: protein Wnt-5a-like</name>
 664               </sequence>
 665             </clade>
 666           </clade>
 667         </clade>
 668         <clade>
 669           <branch_length>0.0262246</branch_length>
 670           <clade>
 671             <name>lancelets</name>
 672             <branch_length>0.376048</branch_length>
 673             <clade>
 674               <name>gb_AAF80555_1_lancelets_</name>
 675               <branch_length>0.00289093</branch_length>
 676               <taxonomy>
 677                 <scientific_name>Branchiostoma floridae</scientific_name>
 678               </taxonomy>
 679               <sequence>
 680                 <accession source="ncbi">AF187553.1</accession>
 681                 <name>Branchiostoma floridae (Florida lancelet) Wnt11</name>
 682               </sequence>
 683             </clade>
 684             <clade>
 685               <name>ref_XP_002593786_1_lancelets_</name>
 686               <branch_length>0.00295707</branch_length>
 687               <taxonomy>
 688                 <scientific_name>Branchiostoma floridae</scientific_name>
 689               </taxonomy>
 690               <sequence>
 691                 <accession source="refseq">XP_002593786</accession>
 692                 <name>hypothetical protein BRAFLDRAFT_271417</name>
 693               </sequence>
 694             </clade>
 695           </clade>
 696           <clade>
 697             <branch_length>0.106179</branch_length>
 698             <clade>
 699               <branch_length>0.0440517</branch_length>
 700               <clade>
 701                 <name>birds</name>
 702                 <branch_length>0.0905522</branch_length>
 703                 <clade>
 704                   <branch_length>0.118515</branch_length>
 705                   <clade>
 706                     <name>ref_XP_003208322_1_birds_</name>
 707                     <branch_length>0.0361106</branch_length>
 708                     <taxonomy>
 709                       <scientific_name>Meleagris gallopavo</scientific_name>
 710                     </taxonomy>
 711                     <sequence>
 712                       <accession source="refseq">XP_003208322</accession>
 713                       <name>PREDICTED: protein Wnt-11b-like</name>
 714                     </sequence>
 715                   </clade>
 716                   <clade>
 717                     <name>ref_NP_001124216_1_birds_</name>
 718                     <branch_length>0.0274937</branch_length>
 719                     <taxonomy>
 720                       <scientific_name>Gallus gallus</scientific_name>
 721                     </taxonomy>
 722                     <sequence>
 723                       <accession source="refseq">NP_001124216</accession>
 724                       <name>protein Wnt-11 precursor</name>
 725                     </sequence>
 726                   </clade>
 727                 </clade>
 728                 <clade>
 729                   <name>ref_XP_002189037_1_birds_</name>
 730                   <branch_length>0.21354</branch_length>
 731                   <taxonomy>
 732                     <scientific_name>Taeniopygia guttata</scientific_name>
 733                   </taxonomy>
 734                   <sequence>
 735                     <accession source="refseq">XP_002189037</accession>
 736                     <name>PREDICTED: similar to wingless-type MMTV integration site family,</name>
 737                   </sequence>
 738                 </clade>
 739               </clade>
 740               <clade>
 741                 <branch_length>0.0283196</branch_length>
 742                 <clade>
 743                   <name>dbj_BAF37827_1_turtles_</name>
 744                   <branch_length>0.0650947</branch_length>
 745                   <taxonomy>
 746                     <scientific_name>Pelodiscus sinensis</scientific_name>
 747                   </taxonomy>
 748                   <sequence>
 749                     <accession source="ncbi">AB204883.1</accession>
 750                     <name>Pelodiscus sinensis (Chinese soft-shelled turtle) partial Wnt11b</name>
 751                   </sequence>
 752                 </clade>
 753                 <clade>
 754                   <branch_length>0.00958915</branch_length>
 755                   <clade>
 756                     <name>frogs___toads</name>
 757                     <branch_length>0.103554</branch_length>
 758                     <clade>
 759                       <branch_length>0.00915644</branch_length>
 760                       <clade>
 761                         <name>ref_NP_001084327_1_frogs___toads_</name>
 762                         <branch_length>0.0</branch_length>
 763                         <taxonomy>
 764                           <scientific_name>Xenopus laevis</scientific_name>
 765                         </taxonomy>
 766                         <sequence>
 767                           <accession source="refseq">NP_001084327 NP_001084328</accession>
 768                           <name>protein Wnt-11b precursor</name>
 769                         </sequence>
 770                       </clade>
 771                       <clade>
 772                         <name>gb_AAA19697_1_frogs___toads_</name>
 773                         <branch_length>0.00339381</branch_length>
 774                         <taxonomy>
 775                           <scientific_name>Xenopus laevis</scientific_name>
 776                         </taxonomy>
 777                         <sequence>
 778                           <accession source="ncbi">L23542.1</accession>
 779                           <name>Xenopus laevis (African clawed frog) maternal protein</name>
 780                         </sequence>
 781                       </clade>
 782                     </clade>
 783                     <clade>
 784                       <branch_length>0.021572</branch_length>
 785                       <clade>
 786                         <name>ref_NP_001016735_1_frogs___toads_</name>
 787                         <branch_length>0.00530629</branch_length>
 788                         <taxonomy>
 789                           <scientific_name>Xenopus</scientific_name>
 790                         </taxonomy>
 791                         <sequence>
 792                           <accession source="refseq">NP_001016735</accession>
 793                           <name>protein Wnt-11b-2 precursor</name>
 794                         </sequence>
 795                       </clade>
 796                       <clade>
 797                         <name>ref_NP_001008133_1_frogs___toads_</name>
 798                         <branch_length>0.00920827</branch_length>
 799                         <taxonomy>
 800                           <scientific_name>Xenopus</scientific_name>
 801                         </taxonomy>
 802                         <sequence>
 803                           <accession source="refseq">NP_001008133</accession>
 804                           <name>protein Wnt-11b-1 precursor</name>
 805                         </sequence>
 806                       </clade>
 807                     </clade>
 808                   </clade>
 809                   <clade>
 810                     <name>bony_fishes</name>
 811                     <branch_length>0.199333</branch_length>
 812                     <clade>
 813                       <name>gb_AAI62630_1_bony_fishes_</name>
 814                       <branch_length>0.00127615</branch_length>
 815                       <taxonomy>
 816                         <scientific_name>Danio rerio</scientific_name>
 817                       </taxonomy>
 818                       <sequence>
 819                         <accession source="ncbi">BC162630.1</accession>
 820                         <name>Danio rerio (zebrafish) wnt11 protein</name>
 821                       </sequence>
 822                     </clade>
 823                     <clade>
 824                       <branch_length>0.00164817</branch_length>
 825                       <clade>
 826                         <name>ref_NP_001138276_1_bony_fishes_</name>
 827                         <branch_length>0.00118889</branch_length>
 828                         <taxonomy>
 829                           <scientific_name>Danio rerio</scientific_name>
 830                         </taxonomy>
 831                         <sequence>
 832                           <accession source="refseq">NP_001138276 NP_571031 XP_001331379</accession>
 833                           <name>protein Wnt-11 precursor</name>
 834                         </sequence>
 835                       </clade>
 836                       <clade>
 837                         <name>sp_O73864_1_bony_fishes_</name>
 838                         <branch_length>0.0134104</branch_length>
 839                         <taxonomy>
 840                           <scientific_name>Danio rerio</scientific_name>
 841                         </taxonomy>
 842                         <sequence>
 843                           <symbol>wnt11</symbol>
 844                           <accession source="uniprot">O73864</accession>
 845                           <name>Protein Wnt-11</name>
 846                         </sequence>
 847                       </clade>
 848                     </clade>
 849                   </clade>
 850                 </clade>
 851               </clade>
 852             </clade>
 853             <clade>
 854               <branch_length>0.112925</branch_length>
 855               <clade>
 856                 <name>bony_fishes</name>
 857                 <branch_length>0.0434939</branch_length>
 858                 <clade>
 859                   <branch_length>0.0183845</branch_length>
 860                   <clade>
 861                     <name>ref_XP_003459019_1_bony_fishes_</name>
 862                     <branch_length>0.0717209</branch_length>
 863                     <taxonomy>
 864                       <scientific_name>Oreochromis niloticus</scientific_name>
 865                     </taxonomy>
 866                     <sequence>
 867                       <accession source="refseq">XP_003459019</accession>
 868                       <name>PREDICTED: protein Wnt-11-like</name>
 869                     </sequence>
 870                   </clade>
 871                   <clade>
 872                     <name>emb_CAF87061_1_bony_fishes_</name>
 873                     <branch_length>0.106306</branch_length>
 874                     <taxonomy>
 875                       <scientific_name>Tetraodon nigroviridis</scientific_name>
 876                     </taxonomy>
 877                     <sequence>
 878                       <accession source="ncbi">CAAE01000518.1</accession>
 879                       <name>Tetraodon nigroviridis hypothetical protein</name>
 880                     </sequence>
 881                   </clade>
 882                 </clade>
 883                 <clade>
 884                   <name>ref_NP_571151_1_bony_fishes_</name>
 885                   <branch_length>0.058741</branch_length>
 886                   <taxonomy>
 887                     <scientific_name>Danio rerio</scientific_name>
 888                   </taxonomy>
 889                   <sequence>
 890                     <accession source="refseq">NP_571151</accession>
 891                     <name>protein Wnt-11 precursor</name>
 892                   </sequence>
 893                 </clade>
 894               </clade>
 895               <clade>
 896                 <branch_length>0.0330987</branch_length>
 897                 <clade>
 898                   <branch_length>0.018843</branch_length>
 899                   <clade>
 900                     <name>ref_XP_003429117_1_monotremes_</name>
 901                     <branch_length>0.0696105</branch_length>
 902                     <taxonomy>
 903                       <scientific_name>Ornithorhynchus anatinus</scientific_name>
 904                     </taxonomy>
 905                     <sequence>
 906                       <accession source="refseq">XP_003429117</accession>
 907                       <name>PREDICTED: LOW QUALITY PROTEIN: protein Wnt-11-like</name>
 908                     </sequence>
 909                   </clade>
 910                   <clade>
 911                     <branch_length>0.0090824</branch_length>
 912                     <clade>
 913                       <name>frogs___toads</name>
 914                       <branch_length>0.0696925</branch_length>
 915                       <clade>
 916                         <name>ref_NP_001121530_1_frogs___toads_</name>
 917                         <branch_length>0.0199744</branch_length>
 918                         <taxonomy>
 919                           <scientific_name>Xenopus</scientific_name>
 920                         </taxonomy>
 921                         <sequence>
 922                           <accession source="refseq">NP_001121530</accession>
 923                           <name>protein Wnt-11 precursor</name>
 924                         </sequence>
 925                       </clade>
 926                       <clade>
 927                         <branch_length>0.00618226</branch_length>
 928                         <clade>
 929                           <name>ref_NP_001087079_1_frogs___toads_</name>
 930                           <branch_length>0.00333662</branch_length>
 931                           <taxonomy>
 932                             <scientific_name>Xenopus laevis</scientific_name>
 933                           </taxonomy>
 934                           <sequence>
 935                             <accession source="refseq">NP_001087079</accession>
 936                             <name>protein Wnt-11 precursor</name>
 937                           </sequence>
 938                         </clade>
 939                         <clade>
 940                           <name>gb_AAH78589_1_frogs___toads_</name>
 941                           <branch_length>0.0</branch_length>
 942                           <taxonomy>
 943                             <scientific_name>Xenopus laevis</scientific_name>
 944                           </taxonomy>
 945                           <sequence>
 946                             <accession source="ncbi">BC078589.1</accession>
 947                             <name>Xenopus laevis (African clawed frog) partial WNT11-R protein</name>
 948                           </sequence>
 949                         </clade>
 950                       </clade>
 951                     </clade>
 952                     <clade>
 953                       <branch_length>0.0214024</branch_length>
 954                       <clade>
 955                         <branch_length>0.00542893</branch_length>
 956                         <clade>
 957                           <name>ref_XP_002199577_1_birds_</name>
 958                           <branch_length>0.0219833</branch_length>
 959                           <taxonomy>
 960                             <scientific_name>Taeniopygia guttata</scientific_name>
 961                           </taxonomy>
 962                           <sequence>
 963                             <accession source="refseq">XP_002199577</accession>
 964                             <name>PREDICTED: wingless-type MMTV integration site family, member 11,</name>
 965                           </sequence>
 966                         </clade>
 967                         <clade>
 968                           <name>ref_XP_003225479_1_lizards_</name>
 969                           <branch_length>0.0392092</branch_length>
 970                           <taxonomy>
 971                             <scientific_name>Anolis carolinensis</scientific_name>
 972                           </taxonomy>
 973                           <sequence>
 974                             <accession source="refseq">XP_003225479</accession>
 975                             <name>PREDICTED: protein Wnt-11-like</name>
 976                           </sequence>
 977                         </clade>
 978                       </clade>
 979                       <clade>
 980                         <name>birds</name>
 981                         <branch_length>0.00775104</branch_length>
 982                         <clade>
 983                           <name>ref_XP_002187913_1_birds_</name>
 984                           <branch_length>0.00781053</branch_length>
 985                           <taxonomy>
 986                             <scientific_name>Taeniopygia guttata</scientific_name>
 987                           </taxonomy>
 988                           <sequence>
 989                             <accession source="refseq">XP_002187913</accession>
 990                             <name>PREDICTED: wingless-type MMTV integration site family, member 11</name>
 991                           </sequence>
 992                         </clade>
 993                         <clade>
 994                           <branch_length>0.00834971</branch_length>
 995                           <clade>
 996                             <branch_length>0.0012329</branch_length>
 997                             <clade>
 998                               <name>ref_XP_003203619_1_birds_</name>
 999                               <branch_length>1.88713E-4</branch_length>
1000                               <taxonomy>
1001                                 <scientific_name>Meleagris gallopavo</scientific_name>
1002                               </taxonomy>
1003                               <sequence>
1004                                 <accession source="refseq">XP_003203619</accession>
1005                                 <name>PREDICTED: protein Wnt-11-like</name>
1006                               </sequence>
1007                             </clade>
1008                             <clade>
1009                               <name>ref_NP_990115_1_birds_</name>
1010                               <branch_length>0.00264015</branch_length>
1011                               <taxonomy>
1012                                 <scientific_name>Gallus gallus</scientific_name>
1013                               </taxonomy>
1014                               <sequence>
1015                                 <accession source="refseq">NP_990115</accession>
1016                                 <name>protein Wnt-11 precursor</name>
1017                               </sequence>
1018                             </clade>
1019                           </clade>
1020                           <clade>
1021                             <name>sp_P51891_1_birds_</name>
1022                             <branch_length>0.00159998</branch_length>
1023                             <taxonomy>
1024                               <scientific_name>Coturnix coturnix japonica</scientific_name>
1025                             </taxonomy>
1026                             <sequence>
1027                               <symbol>WNT11</symbol>
1028                               <accession source="uniprot">P51891</accession>
1029                               <name>Protein Wnt-11</name>
1030                             </sequence>
1031                           </clade>
1032                         </clade>
1033                       </clade>
1034                     </clade>
1035                   </clade>
1036                 </clade>
1037                 <clade>
1038                   <branch_length>0.048018</branch_length>
1039                   <clade>
1040                     <name>gb_AES09804_1_carnivores_</name>
1041                     <branch_length>0.0</branch_length>
1042                     <taxonomy>
1043                       <scientific_name>Mustela putorius furo</scientific_name>
1044                     </taxonomy>
1045                     <sequence>
1046                       <accession source="ncbi">JP021206.1</accession>
1047                       <name>Mustela putorius furo (domestic ferret) partial wingless-type MMTV</name>
1048                     </sequence>
1049                   </clade>
1050                   <clade>
1051                     <branch_length>0.0224188</branch_length>
1052                     <clade>
1053                       <name>ref_XP_001495213_3_odd_toed_ungulates_</name>
1054                       <branch_length>0.0058944</branch_length>
1055                       <taxonomy>
1056                         <scientific_name>Equus caballus</scientific_name>
1057                       </taxonomy>
1058                       <sequence>
1059                         <accession source="refseq">XP_001495213</accession>
1060                         <name>PREDICTED: protein Wnt-11-like</name>
1061                       </sequence>
1062                     </clade>
1063                     <clade>
1064                       <branch_length>0.00853522</branch_length>
1065                       <clade>
1066                         <name>rodents</name>
1067                         <branch_length>0.00784751</branch_length>
1068                         <clade>
1069                           <branch_length>0.00133001</branch_length>
1070                           <clade>
1071                             <name>ref_NP_536326_1_rodents_</name>
1072                             <branch_length>6.88651E-4</branch_length>
1073                             <taxonomy>
1074                               <scientific_name>Rattus norvegicus</scientific_name>
1075                             </taxonomy>
1076                             <sequence>
1077                               <accession source="refseq">NP_536326 XP_001065413 XP_238122</accession>
1078                               <name>wingless-type MMTV integration site family, member 11</name>
1079                             </sequence>
1080                           </clade>
1081                           <clade>
1082                             <branch_length>0.0056165</branch_length>
1083                             <clade>
1084                               <name>ref_NP_033545_1_rodents_</name>
1085                               <branch_length>7.4424E-5</branch_length>
1086                               <taxonomy>
1087                                 <scientific_name>Mus musculus</scientific_name>
1088                               </taxonomy>
1089                               <sequence>
1090                                 <accession source="refseq">NP_033545</accession>
1091                                 <name>protein Wnt-11 precursor</name>
1092                               </sequence>
1093                             </clade>
1094                             <clade>
1095                               <name>dbj_BAE23841_1_rodents_</name>
1096                               <branch_length>0.0</branch_length>
1097                               <taxonomy>
1098                                 <scientific_name>Mus musculus</scientific_name>
1099                               </taxonomy>
1100                               <sequence>
1101                                 <accession source="ncbi">AK138967.1</accession>
1102                                 <name>Mus musculus (house mouse) hypothetical protein</name>
1103                               </sequence>
1104                             </clade>
1105                           </clade>
1106                         </clade>
1107                         <clade>
1108                           <name>ref_XP_003507131_1_rodents_</name>
1109                           <branch_length>0.00380006</branch_length>
1110                           <taxonomy>
1111                             <scientific_name>Cricetulus griseus</scientific_name>
1112                           </taxonomy>
1113                           <sequence>
1114                             <accession source="refseq">XP_003507131</accession>
1115                             <name>PREDICTED: protein Wnt-11</name>
1116                           </sequence>
1117                         </clade>
1118                       </clade>
1119                       <clade>
1120                         <branch_length>0.00363426</branch_length>
1121                         <clade>
1122                           <branch_length>0.00122167</branch_length>
1123                           <clade>
1124                             <name>rodents</name>
1125                             <branch_length>0.00592959</branch_length>
1126                             <clade>
1127                               <name>ref_XP_003468598_1_rodents_</name>
1128                               <branch_length>0.00108834</branch_length>
1129                               <taxonomy>
1130                                 <scientific_name>Cavia porcellus</scientific_name>
1131                               </taxonomy>
1132                               <sequence>
1133                                 <accession source="refseq">XP_003468598</accession>
1134                                 <name>PREDICTED: protein Wnt-11-like</name>
1135                               </sequence>
1136                             </clade>
1137                             <clade>
1138                               <name>gb_EHB07727_1_rodents_</name>
1139                               <branch_length>0.00764545</branch_length>
1140                               <taxonomy>
1141                                 <scientific_name>Heterocephalus glaber</scientific_name>
1142                               </taxonomy>
1143                               <sequence>
1144                                 <accession source="ncbi">JH169882.1</accession>
1145                                 <name>Heterocephalus glaber (naked mole-rat) Protein Wnt-11</name>
1146                               </sequence>
1147                             </clade>
1148                           </clade>
1149                           <clade>
1150                             <branch_length>0.0015897</branch_length>
1151                             <clade>
1152                               <name>ref_XP_003420125_1_placentals_</name>
1153                               <branch_length>0.00897318</branch_length>
1154                               <taxonomy>
1155                                 <scientific_name>Loxodonta africana</scientific_name>
1156                               </taxonomy>
1157                               <sequence>
1158                                 <accession source="refseq">XP_003420125</accession>
1159                                 <name>PREDICTED: protein Wnt-11-like</name>
1160                               </sequence>
1161                             </clade>
1162                             <clade>
1163                               <name>ref_NP_001075693_1_rabbits___hares_</name>
1164                               <branch_length>0.00960427</branch_length>
1165                               <taxonomy>
1166                                 <scientific_name>Oryctolagus cuniculus</scientific_name>
1167                               </taxonomy>
1168                               <sequence>
1169                                 <accession source="refseq">NP_001075693</accession>
1170                                 <name>WNT-11 protein</name>
1171                               </sequence>
1172                             </clade>
1173                           </clade>
1174                         </clade>
1175                         <clade>
1176                           <branch_length>7.44351E-4</branch_length>
1177                           <clade>
1178                             <branch_length>0.00183438</branch_length>
1179                             <clade>
1180                               <name>ref_NP_001075925_1_even_toed_ungulates_</name>
1181                               <branch_length>0.01148578</branch_length>
1182                               <taxonomy>
1183                                 <scientific_name>Bos taurus</scientific_name>
1184                               </taxonomy>
1185                               <sequence>
1186                                 <accession source="refseq">NP_001075925 XP_868944</accession>
1187                                 <name>protein Wnt-11</name>
1188                               </sequence>
1189                             </clade>
1190                             <clade>
1191                               <name>carnivores</name>
1192                               <branch_length>0.00280575</branch_length>
1193                               <clade>
1194                                 <name>ref_XP_542301_2_carnivores_</name>
1195                                 <branch_length>4.54548E-4</branch_length>
1196                                 <taxonomy>
1197                                   <scientific_name>Canis lupus familiaris</scientific_name>
1198                                 </taxonomy>
1199                                 <sequence>
1200                                   <accession source="refseq">XP_542301</accession>
1201                                   <name>PREDICTED: protein Wnt-11</name>
1202                                 </sequence>
1203                               </clade>
1204                               <clade>
1205                                 <name>ref_XP_002915341_1_carnivores_</name>
1206                                 <branch_length>0.00237431</branch_length>
1207                                 <taxonomy>
1208                                   <scientific_name>Ailuropoda melanoleuca</scientific_name>
1209                                 </taxonomy>
1210                                 <sequence>
1211                                   <accession source="refseq">XP_002915341</accession>
1212                                   <name>PREDICTED: protein Wnt-11-like</name>
1213                                 </sequence>
1214                               </clade>
1215                             </clade>
1216                           </clade>
1217                           <clade>
1218                             <branch_length>0.00220231</branch_length>
1219                             <clade>
1220                               <name>primates</name>
1221                               <branch_length>0.00346845</branch_length>
1222                               <clade>
1223                                 <name>gb_EHH23261_1_primates_</name>
1224                                 <branch_length>3.5416E-4</branch_length>
1225                                 <taxonomy>
1226                                   <scientific_name>Macaca mulatta</scientific_name>
1227                                 </taxonomy>
1228                                 <sequence>
1229                                   <accession source="ncbi">CM001266.1</accession>
1230                                   <name>Macaca mulatta (Rhesus monkey) hypothetical protein</name>
1231                                 </sequence>
1232                               </clade>
1233                               <clade>
1234                                 <name>ref_XP_001086955_1_primates_</name>
1235                                 <branch_length>0.0024747</branch_length>
1236                                 <taxonomy>
1237                                   <scientific_name>Macaca mulatta</scientific_name>
1238                                 </taxonomy>
1239                                 <sequence>
1240                                   <accession source="refseq">XP_001086955</accession>
1241                                   <name>PREDICTED: protein Wnt-11</name>
1242                                 </sequence>
1243                               </clade>
1244                             </clade>
1245                             <clade>
1246                               <branch_length>0.00205086</branch_length>
1247                               <clade>
1248                                 <name>ref_XP_003357253_1_even_toed_ungulates_</name>
1249                                 <branch_length>0.0107583</branch_length>
1250                                 <taxonomy>
1251                                   <scientific_name>Sus scrofa</scientific_name>
1252                                 </taxonomy>
1253                                 <sequence>
1254                                   <accession source="refseq">XP_003357253</accession>
1255                                   <name>PREDICTED: protein Wnt-11-like</name>
1256                                 </sequence>
1257                               </clade>
1258                               <clade>
1259                                 <branch_length>6.71784E-4</branch_length>
1260                                 <clade>
1261                                   <name>ref_XP_002754856_1_primates_</name>
1262                                   <branch_length>0.0111473</branch_length>
1263                                   <taxonomy>
1264                                     <scientific_name>Callithrix jacchus</scientific_name>
1265                                   </taxonomy>
1266                                   <sequence>
1267                                     <accession source="refseq">XP_002754856</accession>
1268                                     <name>PREDICTED: protein Wnt-11-like</name>
1269                                   </sequence>
1270                                 </clade>
1271                                 <clade>
1272                                   <branch_length>2.78463E-4</branch_length>
1273                                   <clade>
1274                                     <name>ref_XP_003254741_1_primates_</name>
1275                                     <branch_length>0.0</branch_length>
1276                                     <taxonomy>
1277                                       <scientific_name>Nomascus leucogenys</scientific_name>
1278                                     </taxonomy>
1279                                     <sequence>
1280                                       <accession source="refseq">XP_003254741</accession>
1281                                       <name>PREDICTED: protein Wnt-11</name>
1282                                     </sequence>
1283                                   </clade>
1284                                   <clade>
1285                                     <branch_length>0.00289741</branch_length>
1286                                     <clade>
1287                                       <name>emb_CAA73223_1_primates_</name>
1288                                       <branch_length>0.00827541</branch_length>
1289                                       <taxonomy>
1290                                         <scientific_name>Homo sapiens</scientific_name>
1291                                       </taxonomy>
1292                                       <sequence>
1293                                         <accession source="ncbi">Y12692.1</accession>
1294                                         <name>Homo sapiens (human) hypothetical protein</name>
1295                                       </sequence>
1296                                     </clade>
1297                                     <clade>
1298                                       <branch_length>2.51548E-4</branch_length>
1299                                       <clade>
1300                                         <name>ref_NP_004617_2_primates_</name>
1301                                         <branch_length>0.0</branch_length>
1302                                         <taxonomy>
1303                                           <scientific_name>Homo sapiens</scientific_name>
1304                                         </taxonomy>
1305                                         <sequence>
1306                                           <accession source="refseq">NP_004617</accession>
1307                                           <name>protein Wnt-11 precursor</name>
1308                                         </sequence>
1309                                       </clade>
1310                                       <clade>
1311                                         <branch_length>4.31084E-4</branch_length>
1312                                         <clade>
1313                                           <name>gb_AAV38299_1_primates_</name>
1314                                           <branch_length>0.00256993</branch_length>
1315                                           <taxonomy>
1316                                             <scientific_name>Homo sapiens</scientific_name>
1317                                           </taxonomy>
1318                                           <sequence>
1319                                             <accession source="ncbi">BT019492.1</accession>
1320                                             <name>Homo sapiens (human) wingless-type MMTV integration site family, member 11</name>
1321                                           </sequence>
1322                                         </clade>
1323                                         <clade>
1324                                           <branch_length>5.20012E-4</branch_length>
1325                                           <clade>
1326                                             <name>other_sequences</name>
1327                                             <branch_length>0.00231386</branch_length>
1328                                             <clade>
1329                                               <name>gb_AAX36829_1_other_sequences_</name>
1330                                               <branch_length>0.0</branch_length>
1331                                               <taxonomy>
1332                                                 <scientific_name>synthetic construct</scientific_name>
1333                                               </taxonomy>
1334                                               <sequence>
1335                                                 <accession source="ncbi">AY893792.1</accession>
1336                                                 <name>synthetic construct partial wingless-type MMTV integration site family</name>
1337                                               </sequence>
1338                                             </clade>
1339                                             <clade>
1340                                               <name>gb_AAX41552_1_other_sequences_</name>
1341                                               <branch_length>0.0</branch_length>
1342                                               <taxonomy>
1343                                                 <scientific_name>synthetic construct</scientific_name>
1344                                               </taxonomy>
1345                                               <sequence>
1346                                                 <accession source="ncbi">AY888610.1</accession>
1347                                                 <name>synthetic construct wingless-type MMTV integration site family member 11</name>
1348                                               </sequence>
1349                                             </clade>
1350                                           </clade>
1351                                           <clade>
1352                                             <name>primates</name>
1353                                             <branch_length>0.0300714</branch_length>
1354                                             <clade>
1355                                               <name>dbj_BAC11683_1_primates_</name>
1356                                               <branch_length>0.0302193</branch_length>
1357                                               <taxonomy>
1358                                                 <scientific_name>Homo sapiens</scientific_name>
1359                                               </taxonomy>
1360                                               <sequence>
1361                                                 <accession source="ncbi">AK075540.1</accession>
1362                                                 <name>Homo sapiens (human) hypothetical protein</name>
1363                                               </sequence>
1364                                             </clade>
1365                                             <clade>
1366                                               <name>gb_AEG64815_1_primates_</name>
1367                                               <branch_length>0.0</branch_length>
1368                                               <taxonomy>
1369                                                 <scientific_name>Homo sapiens</scientific_name>
1370                                               </taxonomy>
1371                                               <sequence>
1372                                                 <accession source="ncbi">JF800675.1</accession>
1373                                                 <name>Homo sapiens (human) Wnt11 isoform 3</name>
1374                                               </sequence>
1375                                             </clade>
1376                                           </clade>
1377                                         </clade>
1378                                       </clade>
1379                                     </clade>
1380                                   </clade>
1381                                 </clade>
1382                               </clade>
1383                             </clade>
1384                           </clade>
1385                         </clade>
1386                       </clade>
1387                     </clade>
1388                   </clade>
1389                 </clade>
1390               </clade>
1391             </clade>
1392           </clade>
1393         </clade>
1394       </clade>
1395     </clade>
1396   </clade>
1397 </phylogeny>
1398 </phyloxml>