forester/test_data/species_tree_1_unresolved.xml

   1 <?xml version="1.0" encoding="UTF-8"?>
   2 <phyloxml xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
   3    xsi:schemaLocation="http://www.phyloxml.org http://www.phyloxml.org/1.10/phyloxml.xsd"
   4    xmlns="http://www.phyloxml.org">
   5    <phylogeny rooted="true" rerootable="false">
   6       <clade>
   7          <clade>
   8             <clade>
   9                <clade>
  10                   <clade>
  11                      <clade>
  12                         <clade>
  13                            <clade>
  14                               <clade>
  15                                  <clade>
  16                                     <taxonomy>
  17                                        <code>MOUSE</code>
  18                                     </taxonomy>
  19                                  </clade>
  20                                  <clade>
  21                                     <taxonomy>
  22                                        <code>RAT</code>
  23                                     </taxonomy>
  24                                  </clade>
  25                                  <clade>
  26                                     <taxonomy>
  27                                        <code>HUMAN</code>
  28                                     </taxonomy>
  29                                  </clade>
  30                               </clade>
  31                               <clade>
  32                                  <taxonomy>
  33                                     <code>CHICK</code>
  34                                  </taxonomy>
  35                               </clade>
  36                            </clade>
  37                            <clade>
  38                               <taxonomy>
  39                                  <code>XENLA</code>
  40                               </taxonomy>
  41                            </clade>
  42                         </clade>
  43                         <clade>
  44                            <taxonomy>
  45                               <code>CIOIN</code>
  46                            </taxonomy>
  47                         </clade>
  48                         <clade>
  49                            <taxonomy>
  50                               <code>BRAFL</code>
  51                            </taxonomy>
  52                         </clade>
  53                      </clade>
  54                      <clade>
  55                         <taxonomy>
  56                            <code>STRPU</code>
  57                         </taxonomy>
  58                      </clade>
  59                   </clade>
  60                   <clade>
  61                      <clade>
  62                         <taxonomy>
  63                            <code>DROME</code>
  64                         </taxonomy>
  65                      </clade>
  66                      <clade>
  67                         <taxonomy>
  68                            <code>CAEEL</code>
  69                         </taxonomy>
  70                      </clade>
  71                      <clade>
  72                         <taxonomy>
  73                            <code>LOTGI</code>
  74                         </taxonomy>
  75                      </clade>
  76                   </clade>
  77                </clade>
  78                <clade>
  79                   <taxonomy>
  80                      <code>NEMVE</code>
  81                   </taxonomy>
  82                </clade>
  83                <clade>
  84                   <taxonomy>
  85                      <code>BEROV</code>
  86                   </taxonomy>
  87                </clade>
  88                <clade>
  89                   <taxonomy>
  90                      <code>TRIAD</code>
  91                   </taxonomy>
  92                </clade>
  93             </clade>
  94             <clade>
  95                <taxonomy>
  96                   <code>MONBE</code>
  97                </taxonomy>
  98             </clade>
  99          </clade>
 100          <clade>
 101             <taxonomy>
 102                <code>YEAST</code>
 103             </taxonomy>
 104          </clade>
 105       </clade>
 106    </phylogeny>
 107 </phyloxml>