3 * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
4 * Copyright (C) $$Year-Rel$$ The Jalview Authors
6 * This file is part of Jalview.
8 * Jalview is free software: you can redistribute it and/or
9 * modify it under the terms of the GNU General Public License
10 * as published by the Free Software Foundation, either version 3
11 * of the License, or (at your option) any later version.
13 * Jalview is distributed in the hope that it will be useful, but
14 * WITHOUT ANY WARRANTY; without even the implied warranty
15 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
16 * PURPOSE. See the GNU General Public License for more details.
18 * You should have received a copy of the GNU General Public License
19 * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
20 * The Jalview Authors are detailed in the 'AUTHORS' file.
23 <title>Flower Colour Scheme</title>
24 <style type="text/css">
35 <strong><a name="gecos-flower">Flower</a></strong>
38 This colour scheme was generated by the gecos software. See<br/>
39 Kunzmann, P., Mayer, B.E. & Hamacher, K. Substitution matrix based color schemes for sequence alignment visualization. <em>BMC Bioinformatics</em> <strong>21</strong>, 209 (2020). https://doi.org/10.1186/s12859-020-3526-6<br/>
40 and https://gecos.biotite-python.org/ .<br/>
41 Gecos sets perceptual differences in the colour scheme according to differences in the substitution matrix.
44 flower is a light color scheme, based on BLOSUM62.
47 <table width="400" border="1">
50 <td bgcolor="#b18a51">A</td>
51 <td bgcolor="#ff5701">C</td>
52 <td bgcolor="#01a578">D</td>
53 <td bgcolor="#2da0a1">E</td>
56 <td bgcolor="#fa559d">F</td>
57 <td bgcolor="#b1c23c">G</td>
58 <td bgcolor="#0194f9">H</td>
59 <td bgcolor="#f27663">I</td>
62 <td bgcolor="#7fc3d7">K</td>
63 <td bgcolor="#df6e75">L</td>
64 <td bgcolor="#fe9daf">M</td>
65 <td bgcolor="#0bcec6">N</td>
68 <td bgcolor="#4fa32a">P</td>
69 <td bgcolor="#7295ae">Q</td>
70 <td bgcolor="#83bff1">R</td>
71 <td bgcolor="#b4bd9b">S</td>
74 <td bgcolor="#d2b576">T</td>
75 <td bgcolor="#fd997b">V</td>
76 <td bgcolor="#ff2ded">W</td>
77 <td bgcolor="#c96ecf">Y</td>