help/help/html/features/wrap.html

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  22 <head>
  23 <title>Wrap Alignment</title>
  24 </head>
  25
  26 <body>
  27   <p>
  28     <strong>View&#8594;Wrap alignment </strong>
  29   </p>
  30   <p>Use this feature to wrap an alignment to the screen width.</p>
  31   <p>All output (HTML, Printing, JPG etc) will also be in this
  32     wrapped format.</p>
  33   <p>This is most useful when looking at alignments with less than
  34     20 sequences.</p>
  35   <table width="480" border="1">
  36     <tr>
  37       <td>
  38
  39         <table border="0" cellpadding="0" cellspacing="0">
  40           <tr>
  41             <td colspan="6">&nbsp;</td>
  42             <td colspan="9">10<br> |
  43             </td>
  44             <td></td>
  45             <td colspan="9">20<br> |
  46             </td>
  47             <td></td>
  48           </tr>
  49           <tr>
  50             <td nowrap>ADHR_DROPS/7-107&nbsp;&nbsp;</td>
  51             <td bgcolor="#e6331a">K</td>
  52             <td bgcolor="#1ab3b3">H</td>
  53             <td bgcolor="#80b3e6">V</td>
  54             <td bgcolor="#80b3e6">C</td>
  55             <td bgcolor="#1ab3b3">Y</td>
  56             <td bgcolor="#80b3e6">V</td>
  57             <td bgcolor="#80b3e6">A</td>
  58             <td>D</td>
  59             <td bgcolor="#80b3e6">C</td>
  60             <td bgcolor="#e6994d">G</td>
  61             <td bgcolor="#e6994d">G</td>
  62             <td bgcolor="#80b3e6">I</td>
  63             <td>A</td>
  64             <td bgcolor="#80b3e6">L</td>
  65             <td>E</td>
  66             <td bgcolor="#1acc1a">T</td>
  67             <td bgcolor="#1acc1a">S</td>
  68             <td bgcolor="#e6331a">K</td>
  69             <td bgcolor="#80b3e6">V</td>
  70             <td bgcolor="#80b3e6">L</td>
  71             <td bgcolor="#80b3e6">M</td>
  72             <td>T</td>
  73             <td bgcolor="#e6331a">K</td>
  74             <td>N</td>
  75             <td bgcolor="#80b3e6">I</td>
  76             <td bgcolor="#80b3e6">A</td>
  77           </tr>
  78           <tr>
  79             <td nowrap>ADH_DROHE/5-105&nbsp;&nbsp;</td>
  80             <td>S</td>
  81             <td>N</td>
  82             <td bgcolor="#80b3e6">I</td>
  83             <td bgcolor="#80b3e6">I</td>
  84             <td bgcolor="#80b3e6">F</td>
  85             <td bgcolor="#80b3e6">V</td>
  86             <td bgcolor="#80b3e6">A</td>
  87             <td bgcolor="#e6994d">G</td>
  88             <td bgcolor="#80b3e6">L</td>
  89             <td bgcolor="#e6994d">G</td>
  90             <td bgcolor="#e6994d">G</td>
  91             <td bgcolor="#80b3e6">I</td>
  92             <td bgcolor="#e6994d">G</td>
  93             <td bgcolor="#80b3e6">L</td>
  94             <td bgcolor="#cc4dcc">D</td>
  95             <td bgcolor="#1acc1a">T</td>
  96             <td bgcolor="#1acc1a">S</td>
  97             <td bgcolor="#e6331a">R</td>
  98             <td>E</td>
  99             <td bgcolor="#80b3e6">I</td>
 100             <td bgcolor="#80b3e6">V</td>
 101             <td>K</td>
 102             <td>S</td>
 103             <td bgcolor="#e6994d">G</td>
 104             <td bgcolor="#cccc00">P</td>
 105             <td>K</td>
 106           </tr>
 107           <tr>
 108             <td nowrap>PGDH_HUMAN/6-106&nbsp;&nbsp;</td>
 109             <td bgcolor="#e6331a">K</td>
 110             <td bgcolor="#80b3e6">V</td>
 111             <td bgcolor="#80b3e6">A</td>
 112             <td bgcolor="#80b3e6">L</td>
 113             <td bgcolor="#80b3e6">V</td>
 114             <td bgcolor="#1acc1a">T</td>
 115             <td bgcolor="#e6994d">G</td>
 116             <td>A</td>
 117             <td bgcolor="#80b3e6">A</td>
 118             <td>Q</td>
 119             <td bgcolor="#e6994d">G</td>
 120             <td bgcolor="#80b3e6">I</td>
 121             <td bgcolor="#e6994d">G</td>
 122             <td>R</td>
 123             <td>A</td>
 124             <td>F</td>
 125             <td>A</td>
 126             <td bgcolor="#cc4dcc">E</td>
 127             <td bgcolor="#80b3e6">A</td>
 128             <td bgcolor="#80b3e6">L</td>
 129             <td bgcolor="#80b3e6">L</td>
 130             <td>L</td>
 131             <td bgcolor="#e6331a">K</td>
 132             <td bgcolor="#e6994d">G</td>
 133             <td>.</td>
 134             <td bgcolor="#80b3e6">A</td>
 135           </tr>
 136           <tr>
 137             <td height="5"></td>
 138           </tr>
 139           <tr>
 140             <td colspan="6">&nbsp;</td>
 141             <td colspan="9">36<br> |
 142             </td>
 143             <td></td>
 144             <td colspan="9">46<br> |
 145             </td>
 146             <td></td>
 147           </tr>
 148           <tr>
 149             <td nowrap>ADHR_DROPS/7-107&nbsp;&nbsp;</td>
 150             <td bgcolor="#e6331a">K</td>
 151             <td bgcolor="#80b3e6">L</td>
 152             <td bgcolor="#80b3e6">A</td>
 153             <td bgcolor="#80b3e6">I</td>
 154             <td bgcolor="#80b3e6">L</td>
 155             <td>Q</td>
 156             <td>S</td>
 157             <td bgcolor="#80b3e6">V</td>
 158             <td>E</td>
 159             <td bgcolor="#1acc1a">N</td>
 160             <td bgcolor="#cccc00">P</td>
 161             <td bgcolor="#cccc00">P</td>
 162             <td>.</td>
 163             <td>.</td>
 164             <td>.</td>
 165             <td>.</td>
 166             <td>.</td>
 167             <td>.</td>
 168             <td>.</td>
 169             <td>.</td>
 170             <td>A</td>
 171             <td bgcolor="#80b3e6">I</td>
 172             <td bgcolor="#80b3e6">A</td>
 173             <td bgcolor="#1acc1a">Q</td>
 174             <td bgcolor="#80b3e6">L</td>
 175             <td>Q</td>
 176           </tr>
 177           <tr>
 178             <td nowrap>ADH_DROHE/5-105&nbsp;&nbsp;</td>
 179             <td>N</td>
 180             <td bgcolor="#80b3e6">L</td>
 181             <td bgcolor="#80b3e6">V</td>
 182             <td bgcolor="#80b3e6">V</td>
 183             <td bgcolor="#80b3e6">L</td>
 184             <td bgcolor="#cc4dcc">D</td>
 185             <td>R</td>
 186             <td bgcolor="#80b3e6">I</td>
 187             <td bgcolor="#cc4dcc">D</td>
 188             <td bgcolor="#1acc1a">N</td>
 189             <td bgcolor="#cccc00">P</td>
 190             <td bgcolor="#80b3e6">A</td>
 191             <td>A</td>
 192             <td>.</td>
 193             <td>.</td>
 194             <td>.</td>
 195             <td>.</td>
 196             <td>.</td>
 197             <td>.</td>
 198             <td>.</td>
 199             <td>.</td>
 200             <td bgcolor="#80b3e6">I</td>
 201             <td bgcolor="#80b3e6">A</td>
 202             <td bgcolor="#cc4dcc">E</td>
 203             <td bgcolor="#80b3e6">L</td>
 204             <td>K</td>
 205           </tr>
 206           <tr>
 207             <td nowrap>PGDH_HUMAN/6-106&nbsp;&nbsp;</td>
 208             <td bgcolor="#e6331a">K</td>
 209             <td bgcolor="#80b3e6">V</td>
 210             <td bgcolor="#80b3e6">A</td>
 211             <td bgcolor="#80b3e6">L</td>
 212             <td bgcolor="#80b3e6">V</td>
 213             <td bgcolor="#cc4dcc">D</td>
 214             <td>W</td>
 215             <td>N</td>
 216             <td>L</td>
 217             <td>E</td>
 218             <td bgcolor="#80b3e6">A</td>
 219             <td bgcolor="#e6994d">G</td>
 220             <td>.</td>
 221             <td>.</td>
 222             <td>.</td>
 223             <td>.</td>
 224             <td>.</td>
 225             <td>.</td>
 226             <td>.</td>
 227             <td>V</td>
 228             <td>Q</td>
 229             <td bgcolor="#80b3e6">C</td>
 230             <td>K</td>
 231             <td>A</td>
 232             <td bgcolor="#80b3e6">A</td>
 233             <td>L</td>
 234           </tr>
 235           <tr>
 236             <td height="5"></td>
 237           </tr>
 238           <tr>
 239             <td colspan="6">&nbsp;</td>
 240             <td colspan="9">62<br> |
 241             </td>
 242             <td></td>
 243             <td colspan="9">72<br> |
 244             </td>
 245             <td></td>
 246           </tr>
 247           <tr>
 248             <td nowrap>ADHR_DROPS/7-107&nbsp;&nbsp;</td>
 249             <td>S</td>
 250             <td bgcolor="#80b3e6">I</td>
 251             <td>K</td>
 252             <td bgcolor="#1ab3b3">H</td>
 253             <td>S</td>
 254             <td>.</td>
 255             <td>.</td>
 256             <td>.</td>
 257             <td>.</td>
 258             <td>T</td>
 259             <td>Q</td>
 260             <td bgcolor="#80b3e6">I</td>
 261             <td bgcolor="#80b3e6">F</td>
 262             <td bgcolor="#80b3e6">F</td>
 263             <td bgcolor="#80b3e6">W</td>
 264             <td>T</td>
 265             <td bgcolor="#80b3e6">F</td>
 266             <td bgcolor="#cc4dcc">D</td>
 267             <td bgcolor="#80b3e6">V</td>
 268             <td bgcolor="#1acc1a">T</td>
 269             <td bgcolor="#80b3e6">M</td>
 270             <td bgcolor="#80b3e6">A</td>
 271             <td>R</td>
 272             <td bgcolor="#cc4dcc">E</td>
 273             <td bgcolor="#cc4dcc">E</td>
 274             <td>M</td>
 275           </tr>
 276           <tr>
 277             <td nowrap>ADH_DROHE/5-105&nbsp;&nbsp;</td>
 278             <td>A</td>
 279             <td bgcolor="#80b3e6">L</td>
 280             <td>N</td>
 281             <td bgcolor="#cccc00">P</td>
 282             <td>.</td>
 283             <td>.</td>
 284             <td>.</td>
 285             <td>.</td>
 286             <td>K</td>
 287             <td>V</td>
 288             <td>T</td>
 289             <td bgcolor="#80b3e6">I</td>
 290             <td bgcolor="#1acc1a">T</td>
 291             <td bgcolor="#80b3e6">F</td>
 292             <td bgcolor="#1ab3b3">Y</td>
 293             <td bgcolor="#cccc00">P</td>
 294             <td bgcolor="#1ab3b3">Y</td>
 295             <td bgcolor="#cc4dcc">D</td>
 296             <td bgcolor="#80b3e6">V</td>
 297             <td bgcolor="#1acc1a">T</td>
 298             <td bgcolor="#80b3e6">V</td>
 299             <td bgcolor="#cccc00">P</td>
 300             <td>L</td>
 301             <td>A</td>
 302             <td bgcolor="#cc4dcc">E</td>
 303             <td>T</td>
 304           </tr>
 305           <tr>
 306             <td nowrap>PGDH_HUMAN/6-106&nbsp;&nbsp;</td>
 307             <td>D</td>
 308             <td>E</td>
 309             <td>Q</td>
 310             <td bgcolor="#80b3e6">F</td>
 311             <td>E</td>
 312             <td bgcolor="#cccc00">P</td>
 313             <td>.</td>
 314             <td>.</td>
 315             <td>.</td>
 316             <td>Q</td>
 317             <td>K</td>
 318             <td bgcolor="#1acc1a">T</td>
 319             <td bgcolor="#80b3e6">L</td>
 320             <td bgcolor="#80b3e6">F</td>
 321             <td bgcolor="#80b3e6">I</td>
 322             <td>Q</td>
 323             <td bgcolor="#80b3e6">C</td>
 324             <td bgcolor="#cc4dcc">D</td>
 325             <td bgcolor="#80b3e6">V</td>
 326             <td>A</td>
 327             <td>D</td>
 328             <td>Q</td>
 329             <td>Q</td>
 330             <td bgcolor="#1acc1a">Q</td>
 331             <td>L</td>
 332             <td>.</td>
 333           </tr>
 334           <tr>
 335             <td height="5"></td>
 336           </tr>
 337
 338
 339         </table>
 340   </table>
 341
 342
 343 </body>
 344 </html>