2 <head><title>Removing Redundancy</title></head>
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4 <p><strong>Removing redundancy</strong></p>
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5 <p>Selecting this option brings up a window asking you to select a threshold.
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6 If the percentage identity between two sequences exceeds this value one of the
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7 sequences (the shorter) is discarded. The redundancy calculation is done when
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8 the Apply button is pressed. For large numbers of sequences this can take a
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9 long time as all pairs have to be compared. </p>
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