JAL-2392 formatting
[jalview.git] / help / html / misc / aminoAcids.html
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22 <head>
23 <title>Amino Acids</title>
24 <style type="text/css">
25 <!--
26 td {
27         text-align: center;
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31 </style>
32 </head>
33
34 <body>
35
36
37   <div align="center">
38     <table width="450" BORDER="1" cellpadding="3" BGCOLOR="#FFFFFF">
39       <tr>
40         <td width="15">A</td>
41         <td width="25">Ala</td>
42         <td width="90">Alanine</td>
43         <td width="80">aliphatic<br> hydrophobic<br>
44           neutral
45         </td>
46         <td width="43" valign="middle">GCT<br> GCC<br>
47           GCA<br> GCG
48         </td>
49         <td width="125"><img src="ala.jpg" width="94" height="81"></td>
50       </tr>
51       <tr>
52         <td>B</td>
53         <td>&nbsp;</td>
54         <td>either aspartic acid or asparagine</td>
55         <td>&nbsp;</td>
56         <td>&nbsp;</td>
57         <td>&nbsp;</td>
58       </tr>
59       <tr>
60         <td>C</td>
61         <td>Cys</td>
62         <td>Cysteine</td>
63         <td>polar<br> hydrophobic<br> neutral
64         </td>
65         <td>TGT<br> TGC
66         </td>
67         <td><img src="cys.jpg" width="82" height="95"></td>
68       </tr>
69       <tr>
70         <td>D</td>
71         <td>Asp</td>
72         <td>Aspartic Acid</td>
73         <td>polar<br> hydrophilic<br> charged (-)
74         </td>
75         <td>GAT<br> GAC
76         </td>
77         <td><img src="aspartate.jpg" width="95" height="103"></td>
78       </tr>
79       <tr>
80         <td>E</td>
81         <td>Glu</td>
82         <td>Glutamic Acid</td>
83         <td>polar<br> hydrophilic<br> charged (-)
84         </td>
85         <td>GAA<br> GAG
86         </td>
87         <td><img src="glutamate.jpg" width="93" height="128"></td>
88       </tr>
89       <tr>
90         <td>F</td>
91         <td>Phe</td>
92         <td>Phenylalanine</td>
93         <td>aromatic<br> hydrophobic<br> neutral
94         </td>
95         <td>TTT<br> TTC
96         </td>
97         <td><img src="phe.jpg" width="87" height="134"></td>
98       </tr>
99       <tr>
100         <td>G</td>
101         <td>Gly</td>
102         <td>Glycine</td>
103         <td>&nbsp;</td>
104         <td>GGT<br> GGC<br> GGA<br> GGG
105         </td>
106         <td><img src="gly.jpg" width="97" height="79"></td>
107       </tr>
108       <tr>
109         <td>H</td>
110         <td>His</td>
111         <td>Histidine</td>
112         <td>aromatic<br> polar<br> hydrophilic<br>
113           charged (+)
114         </td>
115         <td>CAT<br> CAC
116         </td>
117         <td><img src="his.jpg" width="97" height="142"></td>
118       </tr>
119       <tr>
120         <td>I</td>
121         <td>Ile</td>
122         <td>Isoleucine</td>
123         <td>aliphatic<br> hydrophobic<br> neutral
124         </td>
125         <td>ATT<br> ATC<br> ATA
126         </td>
127         <td><img src="iso.jpg" width="101" height="125"></td>
128       </tr>
129       <tr>
130         <td>K</td>
131         <td>Lys</td>
132         <td>Lysine</td>
133         <td>&nbsp;</td>
134         <td>AAA<br> AAG
135         </td>
136         <td><img src="lys.jpg" width="79" height="167"></td>
137       </tr>
138       <tr>
139         <td>L</td>
140         <td>Leu</td>
141         <td>Leucine</td>
142         <td>aliphatic<br> hydrophobic<br> neutral
143         </td>
144         <td>TTG<br> TTA<br> CTT<br> CTC<br> CTA<br>
145           CTG
146         </td>
147         <td><img src="leu.jpg" width="97" height="120"></td>
148       </tr>
149       <tr>
150         <td>M</td>
151         <td>Met</td>
152         <td>Methionine</td>
153         <td>hydrophobic<br> neutral
154         </td>
155         <td>ATG</td>
156         <td><img src="met.jpg" width="86" height="151"></td>
157       </tr>
158       <tr>
159         <td>N</td>
160         <td>Asn</td>
161         <td>Asparagine</td>
162         <td>polar<br> hydrophilic<br> neutral
163         </td>
164         <td>AAT<br> AAC
165         </td>
166         <td><img src="asparagine.jpg" width="84" height="116"></td>
167       </tr>
168       <tr>
169         <td>P</td>
170         <td>Pro</td>
171         <td>Proline</td>
172         <td>hydrophobic<br> neutral
173         </td>
174         <td>CCT<br> CCC<br> CCA<br> CCG
175         </td>
176         <td><img src="pro.jpg" width="101" height="90"></td>
177       </tr>
178       <tr>
179         <td>Q</td>
180         <td>Gln</td>
181         <td>Glutamine</td>
182         <td>polar<br> hydrophilic<br> neutral
183         </td>
184         <td>CAA<br> CAG
185         </td>
186         <td><img src="glutamine.jpg" width="81" height="137"></td>
187       </tr>
188       <tr>
189         <td>R</td>
190         <td>Arg</td>
191         <td>Arginine</td>
192         <td>polar<br> hydrophilic<br> charged (+)
193         </td>
194         <td>CGT<br> CGC<br> CGA<br> CGG<br> AGA<br>
195           AGG
196         </td>
197         <td><img src="arg.jpg" width="95" height="187"></td>
198       </tr>
199       <tr>
200         <td>S</td>
201         <td>Ser</td>
202         <td>Serine</td>
203         <td>polar<br> hydrophilic<br> neutral
204         </td>
205         <td>TCT<br> TCC<br> TCA<br> TCG<br> AGT<br>
206           AGC
207         </td>
208         <td><img src="ser.jpg" width="96" height="74"></td>
209       </tr>
210       <tr>
211         <td>T</td>
212         <td>Thr</td>
213         <td>Threonine</td>
214         <td>polar<br> hydrophilic<br> neutral
215         </td>
216         <td>ACT<br> ACC<br> ACA<br> ACG
217         </td>
218         <td><img src="thr.jpg" width="94" height="96"></td>
219       </tr>
220       <tr>
221         <td>V</td>
222         <td>Val</td>
223         <td>Valine</td>
224         <td>aliphatic<br> hydrophobic<br> neutral
225         </td>
226         <td>GTT<br> GTC<br> GTA<br> GTG
227         </td>
228         <td><img src="val.jpg" width="99" height="98"></td>
229       </tr>
230       <tr>
231         <td>W</td>
232         <td>Trp</td>
233         <td>Tryptophan</td>
234         <td>aromatic<br> hydrophobic<br> neutral
235         </td>
236         <td>TGG</td>
237         <td><img src="tryp.jpg" width="106" height="173"></td>
238       </tr>
239       <tr>
240         <td>X</td>
241         <td>&nbsp;</td>
242         <td>UNKNOWN</td>
243         <td>&nbsp;</td>
244         <td>&nbsp;</td>
245         <td>&nbsp;</td>
246       </tr>
247       <tr>
248         <td>Y</td>
249         <td>Tyr</td>
250         <td>Tyrosine</td>
251         <td>aromatic<br> polar<br> hydrophobic
252         </td>
253         <td>TAT<br> TAC
254         </td>
255         <td><img src="tyr.jpg" width="85" height="152"></td>
256       </tr>
257       <tr>
258         <td>Z</td>
259         <td>&nbsp;</td>
260         <td>either glutamic acid or glutamine</td>
261         <td>&nbsp;</td>
262         <td>&nbsp;</td>
263         <td>&nbsp;</td>
264       </tr>
265       <tr>
266         <td>&nbsp;</td>
267         <td>End</td>
268         <td>Terminator</td>
269         <td>&nbsp;</td>
270         <td>TAA<br> TAG<br> TGA
271         </td>
272         <td>&nbsp;</td>
273       </tr>
274     </table>
275   </div>
276 </body>
277 </html>