12 - <!-- JAL-98 --> Improved memory usage: sparse arrays used for all consensus calculations
13 - <!-- JAL-2177 --> Jmol updated to version 14.6.4 (released 3rd Oct 2016)
14 - Updated Jalview's Certum code signing certificate for 2016-2017
18 - <!-- JAL-1723 --> Sequence ID tool tip presents abridged set of database cross-references, sorted alphabetically
19 - <!-- JAL-2282--> New replacement token for creating URLs *just* from database cross references. Users with custom links will receive a [warning dialog](webServices/urllinks.html#warning) asking them to update their preferences.
20 - <!-- JAL-2287--> Cancel button and escape listener on dialog warning user about disconnecting Jalview from a Chimera session
21 - <!-- JAL-2320--> Jalview's Chimera control window closes if the Chimera it is connected to is shut down
22 - <!-- JAL-1738--> New keystroke (B) and Select highlighted columns menu item to mark columns containing highlighted regions (e.g. from structure selections or results of a Find operation)
23 - <!-- JAL-2284--> Command line option for batch-generation of HTML pages rendering alignment data with the BioJS MSAviewer
31 - <!-- JAL-2286 --> Columns with more than one modal residue are not coloured or thresholded according to percent identity (first observed in Jalview 2.8.2)
32 - <!-- JAL-2301 --> Threonine incorrectly reported as not hydrophobic
33 - <!-- JAL-2318 --> Updates to documentation pages (above PID threshold, amino acid properties)
34 - <!-- JAL-2292 --> Lower case residues in sequences are not reported as mapped to residues in a structure file in the View Mapping report
35 - <!--JAL-2324 --> Identical features with non-numeric scores could be added multiple times to a sequence
36 - <!--JAL-2323, JAL-2333,JAL-2335,JAL-2327 --> Disulphide bond features shown as two highlighted residues rather than a range in linked structure views, and treated correctly when selecting and computing trees from features
37 - <!-- JAL-2281--> Custom URL links for database cross-references are matched to database name regardless of case
41 - <!-- JAL-2282--> Custom URL links for specific database names without regular expressions also offer links from Sequence ID
42 - <!-- JAL-2315--> Removing a single configured link in the URL links pane in Connections preferences doesn't actually update Jalview configuration
43 - <!-- JAL-2272--> CTRL-Click on a selected region to open the alignment area popup menu doesn't work on El-Capitan
44 - <!-- JAL-2280 --> Jalview doesn't offer to associate mmCIF files with similarly named sequences if dropped onto the alignment
45 - <!-- JAL-2312 --> Additional mappings are shown for PDB entries where more chains exist in the PDB accession than are reported in the SIFTS file
46 - <!-- JAL-2317--> Certain structures do not get mapped to the structure view when displayed with Chimera
47 - <!-- JAL-2317--> No chains shown in the Chimera view panel's View->Show Chains submenu
48 - <!--JAL-2277 --> Export as HTML with embedded SVG doesn't work for wrapped alignment views
49 - <!--JAL-2197 --> Rename UI components for running JPred predictions from 'JNet' to 'JPred'
50 - <!-- JAL-2337,JAL-2277 --> Export as PNG or SVG is corrupted when annotation panel vertical scroll is not at first annotation row
51 - <!--JAL-2332 --> Attempting to view structure for Hen lysozyme results in a PDB Client error dialog box
52 - <!-- JAL-2319 --> Structure View's mapping report switched ranges for PDB and sequence for SIFTS