1 action.refresh_services = Refresh Services
2 action.reset_services = Reset Services
3 action.merge_results = Merge Results
4 action.load_scheme = Load scheme
5 action.save_scheme = Save scheme
6 label.scheme_changed = Changes to scheme ''{0}'' have not been saved.<br><br>Save changes, or continue without saving to make a new colour scheme.
7 label.save_changes = Save Changes
8 label.dont_save_changes = Don't Save
9 action.save_image = Save Image
11 action.show_html_source = Show HTML Source
12 action.print = Print...
13 action.web_service = Web Service
14 action.cancel_job = Cancel Job
15 action.start_job = Start Job
16 action.revert = Revert
17 action.move_down = Move Down
18 action.move_up = Move Up
19 action.remove_return_datatype = Remove return datatype
20 action.add_return_datatype = Add return datatype
21 action.remove_input_parameter = Remove selected input parameter
22 action.add_input_parameter = Add input parameter
25 action.open_file = Open file
26 action.show_unconserved = Show Unconserved
27 action.open_new_alignment = Open new alignment
28 action.raise_associated_windows = Raise Associated Windows
29 action.minimize_associated_windows = Minimize Associated Windows
30 action.close_all = Close all
31 action.load_project = Load Project
32 action.save_project = Save Project
34 action.expand_views = Expand Views
35 action.gather_views = Gather Views
36 action.page_setup = Page Setup...
37 action.reload = Reload
40 action.cancel = Cancel
41 action.create = Create
42 action.update = Update
43 action.delete = Delete
45 action.accept = Accept
46 action.select_ddbb = --- Select Database ---
50 action.remove_left = Remove left
51 action.remove_right = Remove right
52 action.remove_empty_columns = Remove Empty Columns
53 action.remove_all_gaps = Remove All Gaps
54 action.left_justify_alignment = Left Justify Alignment
55 action.right_justify_alignment = Right Justify Alignment
58 action.by_pairwise_id = By Pairwise Identity
60 action.by_length = By Length
61 action.by_group = By Group
62 action.unmark_as_reference = Unmark as Reference
63 action.set_as_reference = Set as Reference
64 action.remove = Remove
65 action.remove_redundancy = Remove Redundancy...
66 action.pairwise_alignment = Pairwise Alignment
67 action.user_defined = User Defined...
68 action.by_conservation = By Conservation
70 action.show_gaps = Show Gaps
71 action.show_hidden_markers = Show Hidden Markers
73 action.undefine_groups = Undefine Groups
74 action.make_groups_selection = Make Groups For Selection
78 action.scale_above = Scale Above
79 action.scale_left = Scale Left
80 action.scale_right = Scale Right
81 action.by_tree_order = By Tree Order
83 action.calculate_tree = Calculate Tree...
84 action.calculate_tree_pca = Calculate Tree or PCA...
86 action.by_annotation = By Annotation...
87 action.invert_sequence_selection = Invert Sequence Selection
88 action.invert_column_selection = Invert Column Selection
92 action.set_defaults = Defaults
93 action.create_group = Create Group
94 action.remove_group = Remove Group
95 action.edit_group = Edit Group
96 action.border_colour = Border colour
97 action.edit_new_group = Edit New Group
98 action.hide_sequences = Hide Sequences
99 action.sequences = Sequences
101 action.ids_sequences = IDS and sequences
102 action.reveal_all = Reveal All
103 action.reveal_sequences = Reveal Sequences
104 action.find_all = Find all
105 action.find_next = Find next
108 action.annotations = Annotations
109 action.change_params = Change Parameters
111 action.apply_threshold_all_groups = Apply threshold to all groups
112 action.apply_all_groups = Apply to all Groups
113 action.by_chain = By Chain
114 action.by_sequence = By Sequence
115 action.paste_annotations = Paste Annotations
116 action.format = Format
117 action.select = Select
118 action.new_view = New View
121 action.save_as_default = Save as default
122 action.save_as = Save as...
124 action.cancel_fetch = Cancel Fetch
125 action.change_font = Change Font
126 action.change_font_tree_panel = Change Font (Tree Panel)
127 action.colour = Colour
128 action.calculate = Calculate
129 action.select_all = Select all
130 action.select_highlighted_columns = Select Highlighted Columns
131 tooltip.select_highlighted_columns = Press B to mark highlighted columns, Ctrl-(or Cmd)-B to toggle, and Alt-B to mark all but highlighted columns
132 action.deselect_all = Deselect all
133 action.invert_selection = Invert selection
134 action.using_jmol = Using Jmol
136 action.group_link = Group Link
137 action.show_chain = Show Chain
138 action.show_group = Show Group
139 action.fetch_db_references = Fetch DB References
140 action.view_flanking_regions = Show flanking regions
141 label.view_flanking_regions = Show sequence data either side of the subsequences involved in this alignment
142 label.structures_manager = Structures Manager
143 label.nickname = Nickname:
146 label.input_file_url = Enter URL or Input File
147 label.select_feature = Select feature
150 label.name_param = Name: {0}
152 label.group\: = Group:
153 label.group_name = Group Name
154 label.group_description = Group Description
155 label.edit_group_name_description = Edit Group Name/Description
156 label.colour = Colour:
157 label.description = Description
158 label.description\: = Description:
161 label.current_parameter_set_name = Current parameter set name:
162 label.service_action = Service Action:
163 label.post_url = POST URL:
164 label.url_suffix = URL Suffix
165 label.sequence_source = Sequence Source
166 label.per_seq = per Sequence
167 label.result_vertically_separable = Results are vertically separable
169 label.undo_command = Undo {0}
170 label.redo_command = Redo {0}
171 label.principal_component_analysis = Principal Component Analysis
172 label.average_distance_identity = Average Distance Using % Identity
173 label.neighbour_joining_identity = Neighbour Joining Using % Identity
174 label.choose_calculation = Choose Calculation
175 label.treecalc_title = {0} Using {1}
176 label.tree_calc_av = Average Distance
177 label.tree_calc_nj = Neighbour Joining
178 label.select_score_model = Select score model
179 label.score_model_pid = % Identity
180 label.score_model_blosum62 = BLOSUM62
181 label.score_model_pam250 = PAM 250
182 label.score_model_smithwatermanscore = Score between two sequences aligned with Smith-Waterman with default Peptide/Nucleotide matrix
183 label.score_model_sequencefeaturesimilarity = Distance measure of average number of features not shared at sequence positions
184 label.score_model_conservation = Physicochemical property conservation
185 label.score_model_enhconservation = Physicochemical property conservation
186 label.status_bar = Status bar
187 label.out_to_textbox = Output to Textbox
188 label.occupancy = Occupancy
189 # delete Clustal - use FileFormat name instead
190 label.clustal = Clustal
191 # label.colourScheme_<schemeName> as in JalviewColourScheme
192 label.colourScheme_clustal = Clustalx
193 label.colourScheme_blosum62 = BLOSUM62 Score
194 label.colourScheme_%_identity = Percentage Identity
195 label.colourScheme_zappo = Zappo
196 label.colourScheme_taylor = Taylor
197 label.colourScheme_hydrophobic = Hydrophobicity
198 label.colourScheme_helix_propensity = Helix Propensity
199 label.colourScheme_strand_propensity = Strand Propensity
200 label.colourScheme_turn_propensity = Turn Propensity
201 label.colourScheme_buried_index = Buried Index
202 label.colourScheme_purine/pyrimidine = Purine/Pyrimidine
203 label.colourScheme_nucleotide = Nucleotide
204 label.colourScheme_t-coffee_scores = T-Coffee Scores
205 label.colourScheme_rna_helices = By RNA Helices
210 label.pileup = Pileup
212 label.average_distance_blosum62 = Average Distance Using BLOSUM62
213 label.neighbour_blosum62 = Neighbour Joining Using BLOSUM62
214 label.show_annotations = Show annotations
215 label.hide_annotations = Hide annotations
216 label.show_all_seq_annotations = Show sequence related
217 label.hide_all_seq_annotations = Hide sequence related
218 label.show_all_al_annotations = Show alignment related
219 label.hide_all_al_annotations = Hide alignment related
220 label.hide_all = Hide all
221 label.add_reference_annotations = Add reference annotations
222 label.find_tip = Search alignment, selection or sequence ids for a subsequence (ignoring gaps).<br>Accepts regular expressions - search Help for 'regex' for details.
223 label.colour_text = Colour Text
224 label.show_non_conserved = Show nonconserved
225 label.overview_window = Overview Window
227 label.above_identity_threshold = Above Identity Threshold
228 label.show_sequence_features = Show Sequence Features
229 label.nucleotide = Nucleotide
230 label.protein = Protein
231 label.nucleotides = Nucleotides
232 label.proteins = Proteins
233 label.to_new_alignment = To New Alignment
234 label.to_this_alignment = Add To This Alignment
235 label.apply_colour_to_all_groups = Apply Colour To All Groups
236 label.modify_identity_threshold = Modify Identity Threshold...
237 label.modify_conservation_threshold = Modify Conservation Threshold...
238 label.input_from_textbox = Input from textbox
239 label.centre_column_labels = Centre column labels
240 label.automatic_scrolling = Automatic Scrolling
241 label.documentation = Documentation
242 label.about = About...
243 label.show_sequence_limits = Show Sequence Limits
244 action.feature_settings = Feature Settings...
245 label.feature_settings = Feature Settings
246 label.all_columns = All Columns
247 label.all_sequences = All Sequences
248 label.selected_columns = Selected Columns
249 label.selected_sequences = Selected Sequences
250 label.except_selected_sequences = All except selected sequences
251 label.all_but_selected_region = All but Selected Region (Shift+Ctrl+H)
252 label.selected_region = Selected Region
253 label.all_sequences_columns = All Sequences and Columns
254 label.hide_selected_annotations = Hide selected annotations
255 label.show_selected_annotations = Show selected annotations
256 label.group_consensus = Group Consensus
257 label.group_conservation = Group Conservation
258 label.show_consensus_histogram = Show Consensus Histogram
259 label.show_consensus_logo = Show Consensus Logo
260 label.norm_consensus_logo = Normalise Consensus Logo
261 label.apply_all_groups = Apply to all groups
262 label.autocalculated_annotation = Autocalculated Annotation
263 label.show_first = Show first
264 label.show_last = Show last
265 label.struct_from_pdb = Process secondary structure from PDB
266 label.use_rnaview = Use RNAView for secondary structure
267 label.autoadd_secstr = Add secondary structure annotation to alignment
268 label.autoadd_temp = Add Temperature Factor annotation to alignment
269 label.structure_viewer = Default structure viewer
270 label.chimera_path = Path to Chimera program
271 label.chimera_path_tip = Jalview will first try any path entered here, else standard installation locations.<br>Double-click to browse for file.
272 label.invalid_chimera_path = Chimera path not found or not executable
273 label.chimera_missing = Chimera structure viewer not found.<br/>Please enter the path to Chimera (if installed),<br/>or download and install UCSF Chimera.
274 label.chimera_failed = Error opening Chimera - is it installed?\nCheck path in Preferences, Structure
275 label.min_colour = Minimum Colour
276 label.max_colour = Maximum Colour
277 label.use_original_colours = Use Original Colours
278 label.threshold_minmax = Threshold is min/max
279 label.represent_group_with = Represent Group with {0}
280 label.selection = Selection
281 label.group_colour = Group Colour
282 label.sequence = Sequence
283 label.view_pdb_structure = View PDB Structure
286 label.colour_by_label = Colour by label
287 label.new_feature = New Feature
288 label.match_case = Match Case
289 label.view_alignment_editor = View in alignment editor
290 label.labels = Labels
291 label.output_values = Output Values...
292 label.output_points = Output points...
293 label.output_transformed_points = Output transformed points
294 label.input_data = Input Data...
295 label.nucleotide_matrix = Nucleotide matrix
296 label.protein_matrix = Protein matrix
297 label.show_bootstrap_values = Show Bootstrap Values
298 label.show_distances = Show distances
299 label.mark_unassociated_leaves = Mark Unassociated Leaves
300 label.fit_to_window = Fit To Window
301 label.newick_format = Newick Format
302 label.select_newick_like_tree_file = Select a newick-like tree file
303 label.colours = Colours
304 label.view_mapping = View Mapping
305 label.wireframe = Wireframe
306 label.depthcue = Depthcue
307 label.z_buffering = Z Buffering
308 label.charge_cysteine = Charge & Cysteine
309 label.all_chains_visible = All Chains Visible
310 label.successfully_added_features_alignment = Successfully added features to alignment
311 label.keyboard_editing_mode = Keyboard editing mode is {0}
312 label.paste_features_annotations_Tcoffee_here = Paste your features / annotations / T-coffee score file here.
313 label.removed_columns = Removed {0} columns.
314 label.removed_empty_columns = Removed {0} empty columns.
315 label.paste_newick_tree_file = Paste your Newick tree file here.
316 label.order_by_params = Order by {0}
317 label.html_content = <html>{0}</html>
318 label.paste_pdb_file= Paste your PDB file here.
319 label.paste_pdb_file_for_sequence = Paste PDB file for sequence {0}
320 label.could_not_parse_newick_file = Could not parse Newick file\!\n {0}
321 label.successfully_pasted_tcoffee_scores_to_alignment= Successfully pasted T-Coffee scores to alignment.
322 label.failed_add_tcoffee_scores = Failed to add T-Coffee scores:
323 label.successfully_pasted_annotation_to_alignment= Successfully pasted annotation to alignment.
324 label.couldnt_parse_pasted_text_as_valid_annotation_feature_GFF_tcoffee_file = Couldn't parse pasted text as a valid annotation, feature, GFF, or T-Coffee score file
325 label.successfully_pasted_alignment_file = Successfully pasted alignment file
326 label.paste_your_alignment_file = Paste your alignment file here
327 label.paste_your = Paste your
328 label.finished_searching = Finished searching
329 label.search_results= Search results {0} : {1}
330 label.found_match_for = Found match for {0}
334 label.calculating = Calculating....
335 label.modify_conservation_visibility = Modify conservation visibility
336 label.colour_residues_above_occurrence = Colour residues above % occurrence
337 label.set_this_label_text = set this label text
338 label.sequences_from = Sequences from {0}
339 label.successfully_loaded_file = Successfully loaded file {0}
340 label.successfully_loaded_matrix = Successfully loaded score matrix {0}
341 label.successfully_saved_to_file_in_format = Successfully saved to file: {0} in {1} format.
342 label.copied_sequences_to_clipboard = Copied {0} sequences to clipboard.
343 label.check_file_matches_sequence_ids_alignment = Check that the file matches sequence IDs in the alignment.
344 label.problem_reading_tcoffee_score_file = Problem reading T-COFFEE score file
345 label.source_to_target = {0} ... {1}
346 label.per_sequence_only= Per-sequence only
347 label.to_file = to File
348 label.to_textbox = to Textbox
349 label.jalview = Jalview
350 label.csv_spreadsheet = CSV (Spreadsheet)
351 label.status = Status
352 label.channels = Channels
353 label.channel_title_item_count = {0} ({1})
354 label.blog_item_published_on_date = {0} {1}
355 label.select_das_service_from_table = Select a DAS service from the table to read a full description here.</font></html>
356 label.session_update = Session Update
357 label.new_vamsas_session = New Vamsas Session
358 action.load_vamsas_session = Load Vamsas Session...
359 action.save_vamsas_session = Save Vamsas Session
360 label.select_vamsas_session_opened_as_new_vamsas_session= Select a vamsas session to be opened as a new vamsas session.
361 label.open_saved_vamsas_session = Open a saved VAMSAS session
362 label.groovy_console = Groovy Console...
363 label.lineart = Lineart
364 label.dont_ask_me_again = Don't ask me again
365 label.select_eps_character_rendering_style = Select EPS character rendering style
366 label.invert_selection = Invert Selection
367 label.optimise_order = Optimise Order
368 label.seq_sort_by_score = Sequence sort by Score
369 label.load_colours = Load Colours
370 label.save_colours = Save Colours
371 label.fetch_das_features = Fetch DAS Features
372 label.selected_database_to_fetch_from = Selected {0} database {1} to fetch from {2}
373 label.database_param = Database: {0}
374 label.example = Example
375 label.example_param = Example: {0}
376 label.select_file_format_before_saving = You must select a file format before saving!
377 label.file_format_not_specified = File format not specified
378 label.couldnt_save_file = Couldn't save file: {0}
379 label.error_saving_file = Error Saving File
380 label.remove_from_default_list = Remove from default list?
381 label.remove_user_defined_colour = Remove user defined colour
382 label.you_must_select_least_two_sequences = You must select at least 2 sequences.
383 label.invalid_selection = Invalid Selection
384 label.sequence_selection_insufficient = Sequence selection insufficient
385 label.you_need_at_least_n_sequences = You need to select at least {0} sequences
386 label.not_enough_sequences = Not enough sequences
387 label.selected_region_to_tree_may_only_contain_residues_or_gaps = The selected region to create a tree may\nonly contain residues or gaps.\nTry using the Pad function in the edit menu,\nor one of the multiple sequence alignment web services.
388 label.sequences_selection_not_aligned = Sequences in selection are not aligned
389 label.problem_reading_tree_file = Problem reading tree file
390 label.possible_problem_with_tree_file = Possible problem with tree file
391 label.select_at_least_three_bases_in_at_least_one_sequence_to_cDNA_translation = Please select at least three bases in at least one sequence in order to perform a cDNA translation.
392 label.translation_failed = Translation Failed
393 label.error_when_translating_sequences_submit_bug_report = Unfortunately, something went wrong when translating your sequences.\nPlease take a look in the Jalview java console\nand submit a bug report including the stacktrace.
394 label.implementation_error = Implementation error:
395 label.automatically_associate_structure_files_with_sequences_same_name = Do you want to automatically associate the {0} structure file(s) with sequences in the alignment that have the same name?
396 label.automatically_associate_structure_files_by_name = Automatically Associate Structure files by name
397 label.ignore_unmatched_dropped_files_info = <html>Do you want to <em>ignore</em> the {0} files whose names did not match any sequence IDs ?</html>
398 label.ignore_unmatched_dropped_files = Ignore unmatched dropped files?
399 label.view_name_original = Original
400 label.enter_view_name = Enter View Name
401 label.enter_label = Enter label
402 label.enter_label_for_the_structure = Enter a label for the structure
403 label.pdb_entry_is_already_displayed = {0} is already displayed.\nDo you want to re-use this viewer ?
404 label.map_sequences_to_visible_window = Map Sequences to Visible Window: {0}
405 label.add_pdbentry_to_view = Do you want to add {0} to the view called\n{1}\n
406 label.align_to_existing_structure_view = Align to existing structure view
407 label.pdb_entries_couldnt_be_retrieved = The following pdb entries could not be retrieved from the PDB\:\n{0}\nPlease retry, or try downloading them manually.
408 label.couldnt_load_file = Couldn't load file
409 label.couldnt_find_pdb_id_in_file = Couldn't find a PDB id in the file supplied. Please enter an Id to identify this structure.
410 label.no_pdb_id_in_file = No PDB Id in File
411 label.couldnt_read_pasted_text = Couldn't read the pasted text {0}
412 label.error_parsing_text = Error parsing text
413 label.enter_local_das_source = Enter Nickname & URL of Local DAS Source
414 label.you_can_only_edit_or_remove_local_das_sources = You can only edit or remove local DAS Sources!
415 label.public_das_source = Public DAS source - not editable
416 label.input_alignment_from_url = Input Alignment From URL
417 label.input_alignment = Input Alignment
418 label.couldnt_import_as_vamsas_session = Couldn't import {0} as a new vamsas session.
419 label.vamsas_document_import_failed = Vamsas Document Import Failed
420 label.couldnt_locate = Couldn't locate {0}
421 label.url_not_found = URL not found
422 label.new_sequence_url_link = New sequence URL link
423 label.cannot_edit_annotations_in_wrapped_view = Cannot edit annotations in wrapped view
424 label.wrapped_view_no_edit = Wrapped view - no edit
425 label.error_retrieving_data = Error Retrieving Data
426 label.user_colour_scheme_must_have_name = User colour scheme must have a name
427 label.no_name_colour_scheme = No name for colour scheme
428 label.invalid_url = Invalid URL !
429 label.error_loading_file = Error loading file
430 label.problems_opening_file = Encountered problems opening {0}!!
431 label.file_open_error = File open error
432 label.no_das_sources_selected_warn = No das sources were selected.\nPlease select some sources and\ntry again.
433 label.no_das_sources_selected_title = No DAS Sources Selected
434 label.colour_scheme_exists_overwrite = Colour scheme {0} exists.\nContinue saving colour scheme as {1}?"
435 label.duplicate_scheme_name = Duplicate scheme name
436 label.jalview_new_questionnaire = There is a new Questionnaire available. Would you like to complete it now ?\n
437 label.jalview_user_survey = Jalview User Survey
438 label.alignment_properties = Alignment Properties: {0}
439 label.alignment_props = Alignment Properties
440 label.input_cut_paste = Cut & Paste Input
441 label.input_cut_paste_params = Cut & Paste Input - {0}
442 label.alignment_output_command = Alignment output - {0}
443 label.annotations = Annotations
444 label.structure_options = Structure Options
445 label.features = Features
446 label.overview_params = Overview {0}
447 label.paste_newick_file = Paste Newick file
448 label.load_tree_from_file = From File -
449 label.colour_by_annotation = Colour by Annotation
450 label.selection_output_command = Selection output - {0}
451 label.annotation_for_displayid = <p><h2>Annotation for {0} </h2></p><p>
452 label.pdb_sequence_mapping = PDB - Sequence Mapping
453 label.pca_details = PCA details
454 label.redundancy_threshold_selection = Redundancy threshold selection
455 label.user_defined_colours = User defined colours
456 label.jalviewLite_release = JalviewLite - Release {0}
457 label.jaview_build_date = Build date: {0}
458 label.jalview_authors_1 = Authors: Jim Procter, Andrew Waterhouse, Mungo Carstairs, Tochukwu Ofoegbu, Lauren Lui, Jan Engelhardt,
459 label.jalview_authors_2 = Natasha Sherstnev, Daniel Barton, Michele Clamp, James Cuff, Steve Searle, David Martin & Geoff Barton.
460 label.jalview_dev_managers = Development managed by The Barton Group, University of Dundee, Scotland, UK.
461 label.jalview_distribution_lists = For help, see the FAQ at www.jalview.org and/or join the jalview-discuss@jalview.org mailing list
462 label.jalview_please_cite = If you use Jalview, please cite:
463 label.jalview_cite_1_authors = Waterhouse, A.M., Procter, J.B., Martin, D.M.A, Clamp, M. and Barton, G. J. (2009)
464 label.jalview_cite_1_title = Jalview Version 2 - a multiple sequence alignment editor and analysis workbench
465 label.jalview_cite_1_ref = Bioinformatics doi: 10.1093/bioinformatics/btp033
466 label.right_click = Right click
467 label.to_add_annotation = to add annotation
468 label.alignment_has_no_annotations = Alignment has no annotations
469 label.retrieving_pdb_data = Retrieving PDB data...
471 label.no_features_added_to_this_alignment = No Features added to this alignment!!
472 label.features_can_be_added_from_searches_1 = (Features can be added from searches or
473 label.features_can_be_added_from_searches_2 = from Jalview / GFF features files)
474 label.calculating_pca= Calculating PCA
475 label.jalview_cannot_open_file = Jalview can't open file
476 label.jalview_applet = Jalview applet
477 label.loading_data = Loading data
478 label.memory_stats = Total Free Memory: {0} MB; Max Memory: {1} MB; {2} %
479 label.calculating_tree = Calculating tree
480 label.state_queueing = queuing
481 label.state_running = running
482 label.state_completed = finished
483 label.state_job_cancelled = job cancelled!!
484 label.state_job_error = job error!
485 label.server_error_try_later = Server Error! (try later)
486 label.error_loading_pdb_data = Error loading PDB data!!
487 label.fetching_pdb_data = Fetching PDB data...
488 label.structure_type = Structure type
489 label.settings_for_type = Settings for {0}
490 label.view_full_application = View in Full Application
491 label.load_associated_tree = Load Associated Tree...
492 label.load_features_annotations = Load Features/Annotations...
493 label.export_features = Export Features...
494 label.export_annotations = Export Annotations...
495 label.to_upper_case = To Upper Case
496 label.to_lower_case = To Lower Case
497 label.toggle_case = Toggle Case
498 label.edit_name_description = Edit Name/Description...
499 label.create_sequence_feature = Create Sequence Feature...
500 label.edit_sequence = Edit Sequence
501 label.edit_sequences = Edit Sequences
502 label.sequence_details = Sequence Details
503 label.jmol_help = Jmol Help
504 label.chimera_help = Chimera Help
505 label.close_viewer = Close Viewer
506 label.confirm_close_chimera = This will close Jalview''s connection to {0}.<br>Do you want to close the Chimera window as well?
508 label.sort_by = Sort alignment by
509 label.sort_by_score = Sort by Score
510 label.sort_by_density = Sort by Density
511 label.sequence_sort_by_density = Sequence sort by Density
512 label.sort_ann_by = Sort annotations by
513 label.sort_annotations_by_sequence = Sort by sequence
514 label.sort_annotations_by_label = Sort by label
515 label.reveal = Reveal
516 label.hide_columns = Hide Columns
517 label.load_jalview_annotations = Load Jalview Annotations or Features File
518 label.load_tree_file = Load a tree file
519 label.retrieve_parse_sequence_database_records_alignment_or_selected_sequences = Retrieve and parse sequence database records for the alignment or the currently selected sequences
520 label.standard_databases = Standard Databases
521 label.fetch_embl_uniprot = Fetch from EMBL/EMBLCDS or Uniprot/PDB and any selected DAS sources
522 label.reset_min_max_colours_to_defaults = Reset min and max colours to defaults from user preferences.
523 label.align_structures_using_linked_alignment_views = Superpose structures using {0} selected alignment view(s)
524 label.connect_to_session = Connect to session {0}
525 label.threshold_feature_display_by_score = Threshold the feature display by score.
526 label.threshold_feature_no_threshold = No Threshold
527 label.threshold_feature_above_threshold = Above Threshold
528 label.threshold_feature_below_threshold = Below Threshold
529 label.adjust_threshold = Adjust threshold
530 label.toggle_absolute_relative_display_threshold = Toggle between absolute and relative display threshold.
531 label.display_features_same_type_different_label_using_different_colour = Display features of the same type with a different label using a different colour. (e.g. domain features)
532 label.select_colour_minimum_value = Select Colour for Minimum Value
533 label.select_colour_maximum_value = Select Colour for Maximum Value
534 label.open_url_param = Open URL {0}
535 label.open_url_seqs_param = Open URL ({0}..) ({1} seqs)
536 label.load_pdb_file_associate_with_sequence = Load a PDB file and associate it with sequence {0}
537 label.reveal_hidden_columns = Reveal Hidden Columns with Right Mouse Button
538 label.dark_colour = Dark Colour
539 label.light_colour = Light Colour
540 label.highlightnode = Left click to select leaves.<br>Double-click to invert leaves.<br>Right click to change colour.
541 label.load_colour_scheme = Load colour scheme
542 label.copy_format_from = Copy format from
543 label.toggle_enabled_views = When enabled, allows many views to be selected.
544 label.select_all_views = Select all views
545 label.select_many_views = Select many views
546 label.edit_notes_parameter_set = Click to edit the notes for this parameter set.
547 label.open_local_file = Open local file
548 label.enable_automatically_sort_alignment_when_open_new_tree = Enable this to automatically sort<br>the alignment when you open<br> a new tree.
549 label.listen_for_selections = Listen for selections
550 label.selections_mirror_selections_made_same_sequences_other_views = When selected, selections in this view will mirror<br>selections made on the same sequences in other views.
551 label.toggle_sequence_visibility = Shift+H toggles sequence visiblity
552 label.toggle_columns_visibility = Ctrl+H toggles column visiblity.
553 label.toggles_visibility_hidden_selected_regions = H toggles visibility of hidden or selected regions
554 label.rename_tab_eXpand_reGroup= Right-click to rename tab <br> Press X to eXpand tabs, G to reGroup.
555 label.right_align_sequence_id = Right Align Sequence Id
556 label.sequence_id_tooltip = Sequence ID Tooltip
557 label.no_services = <No Services>
558 label.select_copy_raw_html = Select this if you want to copy raw html
559 label.share_data_vamsas_applications = Share data with other vamsas applications
560 label.connect_to = Connect to
561 label.join_existing_vamsas_session = Join an existing vamsas session
562 label.from_url = from URL
563 label.any_trees_calculated_or_loaded_alignment_automatically_sort = When selected, any trees calculated or loaded onto the alignment will automatically sort the alignment
564 label.sort_with_new_tree = Sort With New Tree
565 label.from_textbox = from Textbox
566 label.window = Window
567 label.preferences = Preferences
569 label.fetch_sequences = Fetch Sequences
570 action.fetch_sequences = Fetch Sequences...
571 label.stop_vamsas_session = Stop Vamsas Session
572 label.collect_garbage = Collect Garbage
573 label.show_memory_usage = Show Memory Usage
574 label.show_java_console = Show Java Console
575 label.show_jalview_news = Show Jalview News
576 label.take_snapshot = Take snapshot
577 label.monospaced_fonts_faster_to_render = Monospaced fonts are faster to render
578 label.anti_alias_fonts = Anti-alias Fonts (Slower to render)
579 label.monospaced_font= Monospaced
580 label.quality = Quality
581 label.maximize_window = Maximize Window
582 label.conservation = Conservation
583 label.consensus = Consensus
584 label.histogram = Histogram
586 label.non_positional_features = List Non-positional Features
587 label.database_references = List Database References
588 #label.share_selection_across_views = Share selection across views
589 #label.scroll_highlighted_regions = Scroll to highlighted regions
590 label.gap_symbol = Gap Symbol
591 label.prot_alignment_colour = Protein Alignment Colour
592 label.nuc_alignment_colour = Nucleotide Alignment Colour
593 label.address = Address
595 label.default_browser_unix = Default Browser (Unix)
596 label.send_usage_statistics = Send usage statistics
597 label.check_for_questionnaires = Check for questionnaires
598 label.check_for_latest_version = Check for latest version
599 label.url_linkfrom_sequence_id = URL link from Sequence ID
600 label.use_proxy_server = Use a proxy server
601 label.eps_rendering_style = EPS rendering style
602 label.append_start_end = Append /start-end (/15-380)
603 label.full_sequence_id = Full Sequence Id
604 label.smooth_font = Smooth Font
605 label.autocalculate_consensus = AutoCalculate Consensus
606 label.pad_gaps = Pad Gaps
607 label.pad_gaps_when_editing = Pad Gaps When Editing
608 label.automatically_set_id_width = Automatically set ID width
609 label.figure_id_column_width = Figure ID column width
610 label.use_modeller_output = Use Modeller Output
611 label.wrap_alignment = Wrap Alignment
612 label.right_align_ids = Right Align Ids
613 label.sequence_name_italics = Italic Sequence Ids
614 label.open_overview = Open Overview
615 label.default_colour_scheme_for_alignment = Default Colour Scheme for alignment
616 label.annotation_shading_default = Annotation Shading Default
617 label.default_minimum_colour_annotation_shading = Default Minimum Colour for annotation shading
618 label.default_maximum_colour_annotation_shading = Default Maximum Colour for annotation shading
619 label.visual = Visual
620 label.connections = Connections
621 label.output = Output
622 label.editing = Editing
623 label.das_settings = DAS Settings
624 label.web_services = Web Services
625 label.right_click_to_edit_currently_selected_parameter = Right click to edit currently selected parameter.
626 label.let_jmol_manage_structure_colours = Let Jmol manage structure colours
627 label.let_chimera_manage_structure_colours = Let Chimera manage structure colours
628 label.fetch_chimera_attributes = Fetch Chimera attributes
629 label.fetch_chimera_attributes_tip = Copy Chimera attribute to Jalview feature
630 label.marks_leaves_tree_not_associated_with_sequence = Marks leaves of tree not associated with a sequence
631 label.index_web_services_menu_by_host_site = Index web services in menu by the host site
632 label.option_want_informed_web_service_URL_cannot_be_accessed_jalview_when_starts_up = Check this option if you want to be informed<br>when a web service URL cannot be accessed by Jalview<br>when it starts up
633 label.new_service_url = New Service URL
634 label.edit_service_url = Edit Service URL
635 label.delete_service_url = Delete Service URL
636 label.details = Details
637 label.options = Options
638 label.parameters = Parameters
639 label.available_das_sources = Available DAS Sources
640 label.full_details = Full Details
641 label.authority = Authority
643 label.proxy_server = Proxy Server
644 label.file_output = File Output
645 label.select_input_type = Select input type
646 label.set_options_for_type = Set options for type
647 label.data_input_parameters = Data input parameters
648 label.data_returned_by_service = Data returned by service
649 label.rsbs_encoded_service = RSBS Encoded Service
650 label.parsing_errors = Parsing errors
651 label.simple_bioinformatics_rest_services = Simple Bioinformatics Rest Services
652 label.web_service_discovery_urls = Web Service Discovery URLS
653 label.input_parameter_name = Input Parameter name
654 label.short_descriptive_name_for_service = Short descriptive name for service
655 label.function_service_performs = What kind of function the service performs (e.g. alignment, analysis, search, etc).
656 label.brief_description_service = Brief description of service
657 label.url_post_data_service = URL to post data to service. Include any special parameters needed here
658 label.optional_suffix = Optional suffix added to URL when retrieving results from service
659 label.preferred_gap_character = Which gap character does this service prefer?
660 label.gap_character = Gap character
661 label.move_return_type_up_order= Move return type up order
662 label.move_return_type_down_order= Move return type down order
663 label.update_user_parameter_set = Update this existing user parameter set
664 label.delete_user_parameter_set = Delete the currently selected user parameter set
665 label.create_user_parameter_set = Create a new parameter set with the current settings.
666 label.revert_changes_user_parameter_set = Undo all changes to the current parameter set
667 label.start_job_current_settings = Start Job with current settings
668 label.cancel_job_close_dialog = Close this dialog and cancel job
669 label.input_output = Input/Output
670 label.cut_paste = Cut'n'Paste
671 label.adjusting_parameters_for_calculation = Adjusting parameters for existing Calculation
672 label.2d_rna_structure_line = 2D RNA {0} (alignment)
673 label.2d_rna_sequence_name = 2D RNA - {0}
674 label.edit_name_and_description_current_group = Edit name and description of current group
675 label.from_file = From File
676 label.enter_pdb_id = Enter PDB Id (or pdbid:chaincode)
677 label.text_colour = Text Colour...
678 label.structure = Structure
679 label.show_pdbstruct_dialog = 3D Structure Data...
680 label.view_rna_structure = VARNA 2D Structure
681 label.create_sequence_details_report_annotation_for = Annotation for {0}
682 label.sequence_details_for = Sequence Details for {0}
683 label.sequence_name = Sequence Name
684 label.sequence_description = Sequence Description
685 label.edit_sequence_name_description = Edit Sequence Name/Description
686 label.spaces_converted_to_backslashes = Spaces have been converted to _
687 label.no_spaces_allowed_sequence_name = No spaces allowed in Sequence Name
688 label.select_outline_colour = Select Outline Colour
689 label.web_browser_not_found_unix = Unixers\: Couldn't find default web browser.\nAdd the full path to your browser in Preferences."
690 label.web_browser_not_found = Web browser not found
691 label.select_pdb_file_for = Select a PDB file for {0}
694 label.show_database_refs = Show Database Refs
695 label.show_non_positional_features = Show Non-Positional Features
696 label.save_png_image = Save As PNG Image
697 label.load_tree_for_sequence_set = Load a tree for this sequence set
698 label.export_image = Export Image
699 label.vamsas_store = VAMSAS store
700 label.translate_cDNA = Translate as cDNA
701 label.reverse = Reverse
702 label.reverse_complement = Reverse Complement
703 label.linked_view_title = Linked CDS and protein view
704 label.extract_scores = Extract Scores
705 label.get_cross_refs = Get Cross-References
706 label.sort_alignment_new_tree = Sort Alignment With New Tree
707 label.add_sequences = Add Sequences
708 label.new_window = New Window
709 label.split_window = Split Window
710 label.refresh_available_sources = Refresh Available Sources
711 label.use_registry = Use Registry
712 label.add_local_source = Add Local Source
713 label.set_as_default = Set as Default
714 label.show_labels = Show labels
715 action.background_colour = Background Colour...
716 label.associate_nodes_with = Associate Nodes With
717 label.link_name = Link Name
718 label.pdb_file = PDB file
719 label.colour_with_jmol = Colour with Jmol
720 label.colour_with_chimera = Colour with Chimera
721 label.superpose_structures = Superpose Structures
722 error.superposition_failed = Superposition failed: {0}
723 label.insufficient_residues = Not enough aligned residues ({0}) to perform superposition
725 label.chimera = Chimera
726 label.create_chimera_attributes = Write Jalview features
727 label.create_chimera_attributes_tip = Set Chimera residue attributes for visible features
728 label.attributes_set = {0} attribute values set on Chimera
729 label.sort_alignment_by_tree = Sort Alignment By Tree
730 label.mark_unlinked_leaves = Mark Unlinked Leaves
731 label.associate_leaves_with = Associate Leaves With
732 label.save_colour_scheme_with_unique_name_added_to_colour_menu = Save your colour scheme with a unique name and it will be added to the Colour menu
733 label.case_sensitive = Case Sensitive
734 label.lower_case_colour = Colour All Lower Case
735 label.lower_case_tip = Chosen colour applies to all lower case symbols
736 label.index_by_host = Index by Host
737 label.index_by_type = Index by Type
738 label.enable_jabaws_services = Enable JABAWS Services
739 label.display_warnings = Display Warnings
740 label.move_url_up = Move URL Up
741 label.move_url_down = Move URL Down
742 label.add_sbrs_definition = Add a SBRS Definition
743 label.edit_sbrs_definition = Edit SBRS Definition
744 label.delete_sbrs_definition = Delete SBRS Definition
745 label.your_sequences_have_been_verified = Your sequences have been verified against known sequence databases.\n(Use Calculate | Show flanking regions to show enclosing sequence.)\nTo preserve data changes, save your alignment.\n\n
746 label.sequences_updated = Sequences updated
747 label.dbref_search_completed = DBRef search completed
748 label.show_all_chains = Show all chains
749 label.fetch_all_param = Fetch all {0}
750 label.paste_new_window = Paste To New Window
751 label.settings_for_param = Settings for {0}
752 label.view_params = View {0}
753 label.aacon_calculations = AACon Calculations
754 label.aacon_settings = Change AACon Settings...
755 tooltip.aacon_calculations = When checked, AACon calculations are updated automatically.
756 tooltip.aacon_settings = Modify settings for AACon calculations.
757 label.rnalifold_calculations = RNAAliFold Prediction
758 label.rnalifold_settings = Change RNAAliFold settings...
759 tooltip.rnalifold_calculations = When checked, RNA secondary structure predictions will be calculated for the alignment, and updated when edits are made.
760 tooltip.rnalifold_settings = Modify settings for the RNAAliFold prediction. Use this to hide or show different results of the RNA calculation, and change RNA folding parameters.
761 label.all_views = All Views
762 label.align_sequences_to_existing_alignment = Align sequences to an existing alignment
763 label.realign_with_params = Realign with {0}
764 label.calcname_with_default_settings = {0} with Defaults
765 label.action_with_default_settings = {0} with default settings
766 label.edit_settings_and_run = Edit settings and run...
767 label.view_and_change_parameters_before_alignment = View and change the parameters before alignment
768 label.run_with_preset_params = Run {0} with preset
769 label.view_and_change_parameters_before_running_calculation = View and change parameters before running calculation
770 label.view_documentation = View documentation
771 label.select_return_type = Select return type
772 label.translation_of_params = Translation of {0}
773 label.features_for_params = Features for - {0}
774 label.annotations_for_params = Annotations for - {0}
775 label.generating_features_for_params = Generating features for - {0}
776 label.generating_annotations_for_params = Generating annotations for - {0}
777 label.varna_params = VARNA - {0}
778 label.sequence_feature_settings = Sequence Feature Settings
779 label.pairwise_aligned_sequences = Pairwise Aligned Sequences
780 label.original_data_for_params = Original Data for {0}
781 label.points_for_params = Points for {0}
782 label.transformed_points_for_params = Transformed points for {0}
783 label.graduated_color_for_params = Graduated Feature Colour for {0}
784 label.select_background_colour = Select Background Colour
785 label.invalid_font = Invalid Font
786 label.separate_multiple_accession_ids = Enter one or more accession IDs separated by a semi-colon ";"
787 label.separate_multiple_query_values = Enter one or more {0}s separated by a semi-colon ";"
788 label.search_all = Enter one or more search values separated by a semi-colon ";" (Note: This searches the entire database)
789 label.replace_commas_semicolons = Replace commas with semi-colons
790 label.parsing_failed_syntax_errors_shown_below_param = Parsing failed. Syntax errors shown below {0}
791 label.parsing_failed_unrecoverable_exception_thrown_param = \nParsing failed. An unrecoverable exception was thrown\:\n {0}
792 label.example_query_param = Example query: {0}
793 label.enter_value_increase_conservation_visibility = Enter value to increase conservation visibility
794 label.enter_percentage_identity_above_which_colour_residues = Enter % identity above which to colour residues
795 label.wswublast_client_credits = To display sequence features an exact Uniprot id with 100% sequence identity match must be entered.\nIn order to display these features, try changing the names of your sequences to the ids suggested below.\n\nRunning WSWUBlast at EBI.\nPlease quote Pillai S., Silventoinen V., Kallio K., Senger M., Sobhany S., Tate J., Velankar S., Golovin A., Henrick K., Rice P., Stoehr P., Lopez R.\nSOAP-based services provided by the European Bioinformatics Institute.\nNucleic Acids Res. 33(1)\:W25-W28 (2005));
796 label.blasting_for_unidentified_sequence = BLASTing for unidentified sequences
797 label.select_columns_containing = Select columns containing
798 label.select_columns_not_containing = Select columns that do not contain
799 label.hide_columns_containing = Hide columns containing
800 label.hide_columns_not_containing = Hide columns that do not contain
801 option.trim_retrieved_seqs = Trim retrieved sequences
802 label.trim_retrieved_sequences = When the reference sequence is longer than the sequence that you are working with, only keep the relevant subsequences.
803 label.use_sequence_id_1 = Use $DB_ACCESSION$ or $DB_ACCESSION=/<regex>/=$
804 label.use_sequence_id_2 = to embed accession id in URL
805 label.use_sequence_id_3 = Use $SEQUENCE_ID$ similarly to embed sequence id
806 label.use_sequence_id_4 =
807 label.ws_parameters_for = Parameters for {0}
808 label.switch_server = Switch server
809 label.choose_jabaws_server = Choose a server for running this service
810 label.services_at = Services at {0}
811 label.rest_client_submit = {0} using {1}
812 label.fetch_retrieve_from =Retrieve from {0}</html>
813 label.fetch_retrieve_from_all_sources = Retrieve from all {0} sources in {1}<br>First is :{2}<html>
814 label.feature_settings_click_drag = Drag up or down to change render order.<br/>Double click to select columns containing feature.
815 label.transparency_tip = Adjust transparency to 'see through' feature colours.
816 label.opt_and_params_further_details = see further details by right-clicking
817 label.opt_and_params_show_brief_desc_image_link = <html>Click to show brief description<br><img src="{0}"/> Right click for further information.</html>
818 label.opt_and_params_show_brief_desc = <html>Click to show brief description<br></html>
819 label.adjusts_width_generated_eps_png = <html>Adjusts the width of the generated EPS or PNG file to ensure even the longest sequence ID or annotation label is displayed</html>
820 label.manually_specify_width_left_column = <html>Manually specify the width of the left hand column where sequence IDs and annotation labels will be rendered in exported alignment figures. This setting will be ignored if 'Automatically set ID width' is set</html>
821 label.job_created_when_checked = <html>When checked, a job is created for every sequence in the current selection.</html>
822 label.when_checked_job_visible_region_and_results = <html>When checked, a single job is created for the visible region and results mapped back onto their location in the alignment. Otherwise, a job would be created for every contiguous region visible in the alignment or current selection (e.g. a multiple alignment).</html>
823 label.flat_file_representation = <html>Flat file representation of this rest service using the Really Simple Bioinformatics Service formalism</html>
824 label.result_of_parsing_rsbs = <html>Results of parsing the RSBS representation</html>
825 label.user_preset = User Preset
826 label.service_preset = Service Preset
827 label.run_with_preset = Run {0} with preset
828 label.view_service_doc_url = <html>View <a href="{0}">{1}</a></html>
829 action.by_title_param = By {0}
830 label.source_from_db_source = Sources from {0}
831 label.from_msname = from {0}
832 label.superpose_with = Superpose with
833 label.scale_label_to_column = Scale Label to Column
834 label.add_new_row = Add New Row
835 label.edit_label_description = Edit Label/Description
836 label.hide_row = Hide This Row
837 label.delete_row = Delete This Row
838 label.show_all_hidden_rows = Show All Hidden Rows
839 label.export_annotation = Export Annotation
840 label.copy_consensus_sequence = Copy Consensus Sequence
843 label.rna_helix = RNA Helix
844 label.remove_annotation = Remove Annotation
845 label.colour_by = Colour by...
846 label.muscle_multiple_protein_sequence_alignment = Muscle Multiple Protein Sequence Alignment
847 label.mafft_multiple_sequence_alignment = MAFFT Multiple Sequence Alignment
848 label.clustalw_multiple_sequence_alignment = ClustalW Multiple Sequence Alignment
849 label.jnet_secondary_structure_prediction = JPred Secondary Structure Prediction
850 label.multiharmony = Multi-Harmony
851 label.unable_start_web_service_analysis = Unable to start web service analysis
852 label.job_couldnt_be_started_check_input = The Job couldn't be started. Please check your input, and the Jalview console for any warning messages.
853 label.prompt_each_time = Prompt each time
854 label.use_source = Use Source
855 label.couldnt_save_project = Couldn't save project
856 label.error_whilst_saving_current_state_to = Error whilst saving current state to {0}
857 label.error_whilst_loading_project_from = Error whilst loading project from {0}
858 label.couldnt_load_project = Couldn't load project
859 label.invalid_name_preset_exists = Invalid name - preset already exists.
860 label.invalid_name = Invalid name
861 label.set_proxy_settings = Please set up your proxy settings in the 'Connections' tab of the Preferences window
862 label.proxy_authorization_failed = Proxy Authorization Failed
863 label.internal_jalview_error = Internal Jalview Error
864 label.secondary_structure_prediction_service_couldnt_be_located = The Secondary Structure Prediction Service named {0} at {1} couldn't be located.
865 label.service_called_is_not_msa_service = The Service called \n{0}\nis not a \nMultiple Sequence Alignment Service\!
866 label.msa_service_is_unknown = The Multiple Sequence Alignment Service named {0} is unknown
867 label.service_called_is_not_seq_search_service = The Service called \n{0}\nis not a \nSequence Search Service\!
868 label.seq_search_service_is_unknown = The Sequence Search Service named {0} is unknown
869 label.feature_type = Feature Type
870 label.display = Display
871 label.service_url = Service URL
872 label.copied_sequences = Copied sequences
873 label.cut_sequences = Cut Sequences
874 label.conservation_colour_increment = Conservation Colour Increment ({0})
875 label.percentage_identity_threshold = Percentage Identity Threshold ({0})
876 label.error_unsupported_owwner_user_colour_scheme = Unsupported owner for User Colour scheme dialog
877 label.save_alignment_to_file = Save Alignment to file
878 label.save_features_to_file = Save Features to File
879 label.save_annotation_to_file = Save Annotation to File
880 label.no_features_on_alignment = No features found on alignment
881 label.save_pdb_file = Save PDB File
882 label.save_text_to_file = Save Text to File
883 label.save_state = Save State
884 label.restore_state = Restore State
885 label.saving_jalview_project = Saving jalview project {0}
886 label.loading_jalview_project = Loading jalview project {0}
887 label.save_vamsas_document_archive = Save Vamsas Document Archive
888 label.saving_vamsas_doc = Saving VAMSAS Document to {0}
889 label.load_feature_colours = Load Feature Colours
890 label.save_feature_colours = Save Feature Colour Scheme
891 label.select_startup_file = Select startup file
892 label.select_default_browser = Select default web browser
893 label.save_tree_as_newick = Save tree as newick file
894 label.create_eps_from_tree = Create EPS file from tree
895 label.create_png_from_tree = Create PNG image from tree
896 label.save_colour_scheme = Save colour scheme
897 label.edit_params_for = Edit parameters for {0}
898 label.choose_filename_for_param_file = Choose a filename for this parameter file
899 label.save_as_html = Save as HTML
900 label.recently_opened = Recently Opened
901 label.blasting_for_unidentified_sequence_jobs_running = BLASTing for unidentified sequences - {0} jobs running.
903 label.tree_from = Tree from {0}
904 label.webservice_job_title = {0} using {1}
905 label.select_visible_region_of = selected {0} region of {1}
906 label.visible = Visible
907 label.select_unselect_visible_regions_from = select and unselected {0} regions from {1}
908 label.visible_region_of = visible region of
909 label.webservice_job_title_on = {0} using {1} on {2}
910 label.updating_vamsas_session = Updating vamsas session
911 label.loading_file = Loading File: {0}
912 label.edit_params = Edit {0}
913 label.as_percentage = As Percentage
914 error.not_implemented = Not implemented
915 error.no_such_method_as_clone1_for = No such method as clone1 for {0}
916 error.null_from_clone1 = Null from clone1!
917 error.not_yet_implemented = Not yet implemented
918 error.unknown_type_dna_or_pep = Unknown Type {0} - dna or pep are the only allowed values.
919 error.implementation_error_dont_know_threshold_annotationcolourgradient = Implementation error: don't know about threshold setting for current AnnotationColourGradient.
920 error.invalid_separator_parameter = Invalid separator parameter - must be non-zero length
921 error.alignment_cigararray_not_implemented = Alignment(CigarArray) not yet implemented
922 error.empty_view_cannot_be_updated = empty view cannot be updated.
923 error.mismatch_between_number_of_sequences_in_block = Mismatch between number of sequences in block {0} ({1}) and the original view ({2})
924 error.padding_not_yet_implemented = Padding not yet implemented
925 error.mismatch_between_visible_blocks_to_update_and_number_of_contigs_in_view = Mismatch between visible blocks to update and number of contigs in view (contigs=0,blocks={0})
926 error.unknown_seq_cigar_operation = Unknown SeqCigar operation {0}
927 error.implementation_bug_parse_cigar_string = Implementation bug in parseCigarString
928 error.implementation_error_invalid_operation_string = Implementation error. Invalid operation string.
929 error.invalid_range_string = Invalid range string (must be zero or positive number)
930 error.implementation_error_delete_range_out_of_bounds = Implementation Error: deleteRange out of bounds: start must be non-negative and less than end.
931 error.implementation_error = Implementation error
932 error.implementation_error_unknown_operation = Implementation Error! Unknown operation {0}
933 error.implementation_error_unexpected_null_from_get_sequence_and_deletions = Implementation Error - unexpected null from getSequenceAndDeletions
934 error.implementation_error_set_seq_null = Implementation Error - _setSeq(null,...)
935 error.implementation_error_s = Implementation Error: _s= {0}
936 error.implementation_error_seqcigar_possible = SeqCigar: Possible implementation error: sequence is longer than dataset sequence
937 error.implmentation_bug_seq_null = Implementation Bug. Null seq
938 error.implementation_bug_cigar_operation_list_range_list = Implementation Bug. Cigar Operation list!= range list
939 error.not_yet_implemented_cigar_object_from_cigar_string = NOT YET Implemented: Constructing a Cigar object from a cigar string and a gapped sequence.
940 error.implementation_bug_cigar_operation = Implementation Bug. Cigar Operation {0} {1} not one of {2}, {3}, or {4}.
941 error.implementation_error_for_new_cigar = Implementation error for new Cigar(SequenceI)
942 error.implementation_error_cigar_seq_no_operations = Implementation error: {0}th sequence Cigar has no operations.
943 error.implementation_error_no_pdbentry_from_index = Implementation error - no corresponding pdbentry (for index {0}) to add sequences mappings to
944 error.jmol_version_not_compatible_with_jalview_version = Jmol version {0} is not compatible with this version of Jalview. Report this problem at issues.jalview.org
945 error.not_implemented_remove = Remove: Not implemented
946 error.not_implemented_clone = Clone: Not implemented
947 error.call_setprogressbar_before_registering_handler = call setProgressBar before registering the progress bar's handler.
948 label.cancelled_params = Cancelled {0}
949 error.implementation_error_cannot_show_view_alignment_frame = Implementation error: cannot show a view from another alignment in an AlignFrame.
950 error.implementation_error_dont_know_about_threshold_setting = Implementation error: don't know about threshold setting for current AnnotationColourGradient.
951 error.eps_generation_not_implemented = EPS Generation not yet implemented
952 error.png_generation_not_implemented = PNG Generation not yet implemented
953 error.try_join_vamsas_session_another = Trying to join a vamsas session when another is already connected
954 error.invalid_vamsas_session_id = Invalid vamsas session id
955 label.groovy_support_failed = Jalview Groovy Support Failed
956 label.couldnt_create_groovy_shell = Couldn't create the groovy Shell. Check the error log for the details of what went wrong.
957 error.unsupported_version_calcIdparam = Unsupported Version for calcIdparam {0}
958 error.implementation_error_cant_reorder_tree = Implementation Error: Can't reorder this tree. Not DefaultMutableTreeNode.
959 error.invalid_value_for_option = Invalid value {0} for option {1}
960 error.implementation_error_cannot_import_vamsas_doc = Implementation Error - cannot import existing vamsas document into an existing session, Yet!
961 label.vamsas_doc_couldnt_be_opened_as_new_session = VAMSAS Document could not be opened as a new session - please choose another
962 error.implementation_error_vamsas_operation_not_init = Impementation error! Vamsas Operations when client not initialised and connected
963 error.jalview_no_connected_vamsas_session = Jalview not connected to Vamsas session
964 error.implementation_error_cannot_recover_vamsas_object_mappings = IMPLEMENTATION ERROR: Cannot recover vamsas object mappings - no backup was made
965 error.setstatus_called_non_existent_job_pane = setStatus called for non-existent job pane {0}
966 error.implementation_error_cannot_find_marshaller_for_param_set =Implementation error: Can't find a marshaller for the parameter set
967 error.implementation_error_old_jalview_object_not_bound =IMPLEMENTATION ERROR: old jalview object is not bound ! ({0})
968 error.implementation_error_vamsas_doc_class_should_bind_to_type = Implementation Error: Vamsas Document Class {0} should bind to a {1} (found a {2})
969 error.invalid_vamsas_rangetype_cannot_resolve_lists = Invalid vamsas RangeType - cannot resolve both lists of Pos and Seg from choice!
970 error.implementation_error_maplist_is_null = Implementation error. MapList is null for initMapType.
971 error.implementation_error_cannot_have_null_alignment = Implementation error: Cannot have null alignment property key
972 error.implementation_error_null_fileparse = Implementation error. Null FileParse in copy constructor
973 error.implementation_error_cannot_map_alignment_sequences = IMPLEMENTATION ERROR: Cannot map an alignment of sequences from different datasets into a single alignment in the vamsas document.
974 error.implementation_error_structure_selection_manager_null = Implementation error. Structure selection manager's context is 'null'
975 exception.ssm_context_is_null = SSM context is null
976 error.idstring_seqstrings_only_one_per_sequence = idstrings and seqstrings contain one string each per sequence
977 error.cannot_have_mixed_length_replacement_vectors = Cannot have mixed length replacement vectors. Replacement vector for {0} is {1} strings long, and have already seen a {2} length vector.
978 error.cannot_have_zero_length_vector_replacement_strings = Cannot have zero length vector of replacement strings - either 1 value or n values.
979 error.implementation_error_multiple_single_sequence_prediction_jobs_not_supported = Implementation Error! Multiple single sequence prediction jobs are not yet supported
980 error.implementation_error_invalid_msa_index_for_job =Implementation Error! Invalid msaIndex for JPredJob on parent MSA input object!
981 error.implementation_error_startjob_called = Implementation error - StartJob(JpredJob) called on {0}
982 error.multiple_jnet_subjob_merge_not_implemented = Multiple JPred subjob merging not yet implemented
983 label.job_never_ran = Job never ran - input returned to user.
984 error.implementation_error_minlen_must_be_greater_zero = Implementation error: minlen must be zero or more
985 error.implementation_error_msawbjob_called = Implementation error - StartJob(MsaWSJob) called on a WSJobInstance {0}
986 error.implementation_error_cannot_attach_ws_menu_entry = IMPLEMENTATION ERROR: cannot attach WS Menu Entry without service handle reference!
987 error.parameter_migration_not_implemented_yet = Parameter migration not implemented yet
988 error.implementation_error_cannot_set_jaba_option = Implementation error: cannot set Jaba Option to a value outside its allowed value range!
989 error.implementation_error_valuetype_doesnt_support_jabaws_type = IMPLEMENTATION ERROR: jalview.ws.params.ValueConstrainI.ValueType does not support the JABAWS type : {0}
990 error.cannot_create_jabaws_param_set = Cannot create a JabaWSParamSet from non-JabaWS parameters
991 error.cannot_set_arguments_to_jabaws_param_set = Cannot set arguments to a JabaWSParamSet that are not JabaWS arguments
992 error.implementation_error_runner_config_not_available = Implementation Error: Runner Config not available for a JABAWS service of type {0} ({1})
993 error.implementation_error_cannot_handle_jaba_param = Implementation Error: Cannot handle Jaba parameter object {0}
994 error.implementation_error_attempt_to_delete_service_preset = Implementation error: Attempt to delete a service preset!
995 error.implementation_error_cannot_locate_oldname_presetname = Implementation error: Can't locate either oldname ({0}) or presetName ({1}in the datastore!"
996 error.implementation_error_jabaws_param_set_only_handled_by = Implementation error: JabaWsParamSets can only be handled by JabaParamStore
997 error.cannot_set_source_file_for = Cannot set source file for {0}
998 error.mismatch_service_instance_preset = Probable mismatch between service instance and preset!
999 error.cannot_set_params_for_ws_preset = Cannot set Parameters for a Jaba Web service's preset
1000 error.implementation_error_can_only_instantiate_jaba_param_sets = Implementation error: Can only instantiate Jaba parameter sets
1001 error.no_aacon_service_found = No AACon service found
1002 error.implementation_error_couldnt_copy_value_constraint = Implementation error: could not copy ValueConstrain!
1003 error.couldnt_encode_as_utf8 = Couldn't encode {0} as UTF-8.
1004 error.tree_inputtype_not_yet_implemented = Tree InputType not yet implemented
1005 error.implementation_error_need_to_have_httpresponse = Implementation Error: need to have an HttpResponse to process
1006 error.dbrefsource_implementation_exception =DBRefSource Implementation Exception
1007 error.implementation_error_dbinstance_must_implement_interface = Implmentation Error - getDbInstances must be given a class that implements jalview.ws.seqfetcher.DbSourceProxy (was given{0})
1008 error.implementation_error_must_init_dbsources =Implementation error. Must initialise dbSources
1009 label.view_controller_toggled_marked = {0} {1} columns {2} features of type {3} across {4} sequence(s)
1010 label.toggled = Toggled
1011 label.marked = Marked
1012 label.containing = containing
1013 label.not_containing = not containing
1014 label.no_feature_of_type_found = No features of type {0} found.
1015 label.submission_params = Submission {0}
1016 label.empty_alignment_job = Empty Alignment Job
1017 label.add_new_sbrs_service = Add a new Simple Bioinformatics Rest Service
1018 label.edit_sbrs_entry = Edit Simple Bioinformatics Rest Service entry
1019 label.pca_recalculating = Recalculating PCA
1020 label.pca_calculating = Calculating PCA
1021 label.select_foreground_colour = Choose foreground colour
1022 label.select_colour_for_text = Select Colour for Text
1023 label.adjunst_foreground_text_colour_threshold = Adjust Foreground Text Colour Threshold
1024 label.select_subtree_colour = Select Sub-Tree Colour
1025 label.create_new_sequence_features = Create New Sequence Feature(s)
1026 label.amend_delete_features = Amend/Delete Features for {0}
1027 exception.out_of_bounds_for_file = Out of bounds for file: i={0}, Final Buffer: i0={1} iend={2}
1028 exception.null_string_given_to_regex_search = Null String Given to Regex.search
1029 exception.null_string_like_given_to_regex_search = Null StringLike Given to Regex.search
1030 exception.null_string_given_to_regex_reverse_search = Null String Given to Regex.reverseSearch
1031 exception.null_string_like_given_to_regex_reverse_search = Null StringLike Given to Regex.reverseSearch
1032 exception.null_string_like_given_to_regex_search_from = Null String Given to Regex.searchFrom
1033 exception.null_string_like_given_to_regex_search_region = Null String Given to Regex.searchRegion
1034 exception.replace_null_regex_pointer = Replacer has null Regex pointer
1035 exception.bad_pattern_to_regex_perl_code = bad pattern to Regex.perlCode: {0}
1036 exception.no_stub_implementation_for_interface = There is no stub implementation for the interface: {0}
1037 exception.cannot_set_endpoint_address_unknown_port = Cannot set Endpoint Address for Unknown Port {0}
1038 exception.mismatched_unseen_closing_char = Mismatched (unseen) closing character {0}
1039 exception.mismatched_closing_char = Mismatched closing character {0}
1040 exception.mismatched_opening_char = Mismatched opening character {0} at {1}
1041 exception.invalid_datasource_couldnt_obtain_reader = Invalid datasource. Could not obtain Reader
1042 exception.unterminated_cigar_string = Unterminated cigar string
1043 exception.unexpected_operation_cigar_string_pos = Unexpected operation {0} in cigar string (position {1} in {2}
1044 exception.couldnt_parse_responde_from_annotated3d_server = Couldn't parse response from Annotate3d server
1045 exception.application_test_npe = Application test: throwing an NullPointerException It should arrive at the console
1046 exception.overwriting_vamsas_id_binding = Overwriting vamsas id binding
1047 exception.overwriting_jalview_id_binding = Overwriting jalview id binding
1048 exception.failed_to_resolve_gzip_stream = Failed to resolve GZIP stream
1049 exception.problem_opening_file_also_tried = Problem opening {0} (also tried {1}) : {2}
1050 exception.problem_opening_file = Problem opening {0} : {1}
1051 exception.failed_to_read_data_from_source = Failed to read data from source: {0}
1052 exception.no_init_source_stream = Unitialised Source Stream
1053 exception.invalid_source_stream = Invalid Source Stream: {0}
1054 error.implementation_error_reset_called_for_invalid_source = Implementation Error: Reset called for invalid source.
1055 exception.number_of_residues_in_query_sequence_differ_from_prediction = Number of residues in {0} supposed query sequence ({1}\n{2})\ndiffer from number of prediction sites in prediction ({3})
1056 label.mapped = mapped
1057 exception.jpredconcide_entry_has_unexpected_number_of_columns = JPredConcise: Entry ({0}) has an unexpected number of columns
1058 exception.couldnt_parse_concise_annotation_for_prediction = Couldn't parse concise annotation for prediction profile.\n{0}
1059 exception.newfile = NewickFile\: {0}\n
1060 label.no_tree_read_in = No Tree read in
1061 exception.rnaml_couldnt_access_datasource = Couldn't access datasource ({0})
1062 exception.ranml_couldnt_process_data = Couldn't process data as RNAML file ({0})
1063 exception.ranml_invalid_file = Invalid RNAML file ({0})
1064 exception.ranml_problem_parsing_data = Problem parsing data as RNAML ({0})
1065 exception.pfam_no_sequences_found = No sequences found (PFAM input)
1066 exception.stockholm_invalid_format = This file is not in valid STOCKHOLM format: First line does not contain '# STOCKHOLM'
1067 exception.couldnt_parse_sequence_line = Could not parse sequence line: {0}
1068 exception.unknown_annotation_detected = Unknown annotation detected: {0} {1}
1069 exception.couldnt_store_sequence_mappings = Couldn't store sequence mappings for {0}
1070 exception.matrix_too_many_iteration = Too many iterations in {0} (max is {1})
1071 exception.browser_not_found = Exception in finding browser: {0}
1072 exception.browser_unable_to_locate = Unable to locate browser: {0}
1073 exception.invocation_target_exception_creating_aedesc = InvocationTargetException while creating AEDesc: {0}
1074 exception.illegal_access_building_apple_evt= IllegalAccessException while building AppleEvent: {0}
1075 exception.unable_to_launch_url = Unable to launch URL: {0}
1076 exception.unable_to_create_internet_config = Unable to create an Internet Config instance: {0}
1077 exception.invocation_target_calling_url = InvocationTargetException while calling openURL: {0}
1078 exception.illegal_access_calling_url = IllegalAccessException while calling openURL: {0}
1079 exception.interrupted_launching_browser = InterruptedException while launching browser: {0}
1080 exception.das_source_doesnt_support_sequence_command = Source {0} does not support the sequence command.
1081 exception.invalid_das_source = Invalid das source: {0}
1082 exception.ebiembl_retrieval_failed_on = EBI EMBL XML retrieval failed on {0}:{1}
1083 exception.no_pdb_records_for_chain = No PDB Records for {0} chain {1}
1084 exception.unexpected_handling_rnaml_translation_for_pdb = Unexpected exception when handling RNAML translation of PDB data
1085 exception.couldnt_recover_sequence_properties_for_alignment = Couldn't recover sequence properties for alignment
1086 exception.unknown_format_for_file = Unknown format {0} for file \: \n{1}
1087 label.remove_gaps = Remove Gaps
1088 exception.couldnt_recover_sequence_props_for_jnet_query = Couldn't recover sequence properties for JPred Query sequence!
1089 exception.server_timeout_try_later = Server timed out - try again later\n
1090 exception.web_service_returned_null_try_later= Server at {0} returned null object, it probably cannot be contacted. Try again later.
1091 exception.cannot_contact_service_endpoint_at = Cannot contact service endpoint at {0}
1092 error.implementation_error_cannot_find_service_url_in_given_set = Implementation error: Cannot find service url in the given url set!
1093 error.implementation_error_cannot_find_service_url_in_given_set_param_store = Implementation error: Cannot find service url in the given url set for this service parameter store ({0}}
1094 exception.jobsubmission_invalid_params_set = Invalid parameter set. Check Jalview implementation
1095 exception.notvaliddata_group_contains_less_than_min_seqs = Group contains less than {0} sequences.
1096 exception.outofmemory_loading_pdb_file = Out of memory loading PDB File
1097 exception.eps_coudnt_write_output_file = Could not write to the output file: {0}
1098 exception.eps_method_not_supported = Method not currently supported by EpsGraphics2D version {0}
1099 exception.eps_unable_to_get_inverse_matrix = Unable to get inverse of matrix: {0}
1100 warn.job_cannot_be_cancelled_close_window = This job cannot be cancelled.\nJust close the window.
1101 warn.service_not_supported = Service not supported!
1102 warn.input_is_too_big = Input is too big!
1103 warn.invalid_job_param_set = Invalid job parameter set!
1104 warn.oneseq_msainput_selection = The current selection only contains a single sequence. Do you want to submit all sequences for alignment instead ?
1105 info.job_couldnt_be_run_server_doesnt_support_program = Job could not be run because the server doesn't support this program.\n{0}
1106 info.job_couldnt_be_run_exceeded_hard_limit = Job could not be run because it exceeded a hard limit on the server.\n{0}
1107 info.job_couldnt_be_run_incorrect_param_setting = Job could not be run because some of the parameter settings are not supported by the server.\n{0}\nPlease check to make sure you have used the correct parameter set for this service\!\n
1108 info.no_jobs_ran = No jobs ran
1109 info.failed_to_submit_prediction = Failed to submit the prediction\:\n{0} {1}
1110 info.invalid_jnet_job_result_data ={0}\n{1}\nInvalid JPred job result data\!\n{2}
1111 info.failed_to_submit_sequences_for_alignment = Failed to submit sequences for alignment.\nIt is most likely that there is a problem with the server.\nJust close the window\n
1112 info.alignment_object_method_notes = \nAlignment Object Method Notes\n
1113 info.server_exception = \n{0} Server exception\!\n{1}
1114 info.invalid_msa_input_mininfo = Need at least two sequences with at least 3 residues each, with no hidden regions between them.
1115 info.invalid_msa_notenough = Not enough sequence data to align
1116 status.processing_commandline_args = Processing commandline arguments...
1117 status.das_features_being_retrived = DAS features being retrieved...
1118 status.searching_for_sequences_from = Searching for sequences from {0}
1119 status.finished_searching_for_sequences_from = Finished searching for sequences from {0}
1120 label.eps_file = EPS file
1121 label.png_image = PNG image
1122 status.saving_file = Saving {0}
1123 status.export_complete = {0} Export completed.
1124 status.fetching_pdb = Fetching PDB {0}
1125 status.refreshing_news = Refreshing news
1126 status.importing_vamsas_session_from = Importing VAMSAS session from {0}
1127 status.opening_params = Opening {0}
1128 status.waiting_sequence_database_fetchers_init = Waiting for Sequence Database Fetchers to initialise
1129 status.init_sequence_database_fetchers = Initialising Sequence Database Fetchers
1130 status.fetching_sequence_queries_from = Fetching {0} sequence queries from {1}
1131 status.finshed_querying = Finished querying
1132 status.parsing_results = Parsing results.
1133 status.processing = Processing...
1134 status.refreshing_web_service_menus = Refreshing Web Service Menus
1135 status.collecting_job_results = Collecting job results.
1136 status.fetching_das_sequence_features = Fetching DAS Sequence Features
1137 status.no_das_sources_active = No DAS Sources Active
1138 status.das_feature_fetching_cancelled = DAS Feature Fetching Cancelled
1139 status.das_feature_fetching_complete = DAS Feature Fetching Complete
1140 status.fetching_db_refs = Fetching db refs
1141 status.loading_cached_pdb_entries = Loading Cached PDB Entries
1142 status.searching_for_pdb_structures = Searching for PDB Structures
1143 status.opening_file_for = opening file for
1144 status.colouring_chimera = Colouring Chimera
1145 label.font_doesnt_have_letters_defined = Font doesn't have letters defined\nso cannot be used\nwith alignment data
1146 label.font_too_small = Font size is too small
1147 label.error_loading_file_params = Error loading file {0}
1148 label.error_loading_jalview_file = Error loading Jalview file
1149 warn.out_of_memory_when_action = Out of memory when {0}\!\!\nSee help files for increasing Java Virtual Machine memory.
1150 warn.out_of_memory_loading_file = Out of memory loading file {0}\!\!\nSee help files for increasing Java Virtual Machine memory.
1151 label.out_of_memory = Out of memory
1152 label.invalid_id_column_width = Invalid ID Column width
1153 warn.user_defined_width_requirements = The user defined width for the\nannotation and sequence ID columns\nin exported figures must be\nat least 12 pixels wide.
1154 label.couldnt_create_sequence_fetcher = Couldn't create SequenceFetcher
1155 warn.couldnt_create_sequence_fetcher_client = Could not create the sequence fetcher client. Check error logs for details.
1156 warn.server_didnt_pass_validation = Service did not pass validation.\nCheck the Jalview Console for more details.
1157 warn.url_must_contain = Sequence URL must contain $SEQUENCE_ID$, $DB_ACCESSION$, or a regex
1158 warn.urls_not_contacted = URLs that could not be contacted
1159 warn.urls_no_jaba = URLs without any JABA Services
1160 info.validate_jabaws_server = Validate JabaWS Server ?\n(Look in console output for results)
1161 label.test_server = Test Server?
1162 info.you_want_jalview_to_find_uniprot_accessions = Do you want Jalview to find\nUniprot Accession ids for given sequence names?
1163 label.find_uniprot_accession_ids = Find Uniprot Accession Ids
1164 label.new_sequence_fetcher = New Sequence Fetcher
1165 label.additional_sequence_fetcher = Additional Sequence Fetcher
1166 label.select_database_retrieval_source = Select Database Retrieval Source
1167 label.overwrite_existing_file = Overwrite existing file?
1168 label.file_already_exists = File exists
1169 label.edit_jabaws_url = Edit JABAWS URL
1170 label.add_jabaws_url = Add new JABAWS URL
1171 label.news_from_jalview = News from http://www.jalview.org
1172 label.cut_paste_alignmen_file = Cut & Paste Alignment File
1173 label.enter_redundancy_threshold = Enter the redundancy threshold
1174 label.select_dark_light_set_threshold = <html><i>Select a dark and light text colour, then set the threshold to<br>switch between colours, based on background colour</i></html>
1175 label.select_feature_colour = Select Feature Colour
1176 label.delete_all = Delete all sequences
1177 warn.delete_all = <html>Deleting all sequences will close the alignment window.<br>Confirm deletion or Cancel.
1178 label.add_annotations_for = Add annotations for
1179 action.choose_annotations = Choose Annotations...
1180 label.choose_annotations = Choose Annotations
1182 label.invalid_search = Search string invalid
1183 error.invalid_regex = Invalid regular expression
1184 label.ignore_gaps_consensus = Ignore Gaps In Consensus
1185 label.show_group_histogram = Show Group Histogram
1186 label.show_group_logo = Show Group Logo
1187 label.normalise_group_logo = Normalise Group Logo
1188 label.show_histogram = Show Histogram
1189 label.show_logo = Show Logo
1190 label.normalise_logo = Normalise Logo
1191 label.no_colour_selection_in_scheme = Please make a colour selection before applying colour scheme
1192 label.no_colour_selection_warn = Error saving colour scheme
1193 label.open_split_window? = Would you like to open as a split window, with cDNA and protein linked?
1194 label.open_split_window = Open split window
1198 label.select_by_annotation = Select/Hide Columns by Annotation
1199 action.select_by_annotation = Select/Hide Columns by Annotation...
1200 label.threshold_filter = Threshold Filter
1201 label.alpha_helix = Alpha Helix
1202 label.beta_strand = Beta Strand
1204 label.select_all = Select All
1205 label.structures_filter = Structures Filter
1206 label.search_filter = Search Filter
1207 label.include_description= Include Description
1209 label.hide_insertions = Hide Insertions
1210 label.mark_as_representative = Mark as representative
1211 label.open_jabaws_web_page = Open JABAWS web page
1212 label.pdb_sequence_fetcher = PDB Sequence Fetcher
1213 label.result = result
1214 label.results = results
1215 label.structure_chooser = Structure Chooser
1216 label.select = Select :
1217 label.invert = Invert
1218 label.select_pdb_file = Select PDB File
1219 info.select_filter_option = Select Filter Option/Manual Entry
1220 info.associate_wit_sequence = Associate with Sequence
1221 label.search_result = Search Result
1222 label.found_structures_summary = Found Structures Summary
1223 label.configure_displayed_columns = Customise Displayed Options
1224 label.start_jalview = Start Jalview
1225 label.biojs_html_export = BioJS
1226 label.scale_as_cdna = Scale protein residues to codons
1227 label.font_as_cdna = Use same font for cDNA and peptide
1228 label.scale_protein_to_cdna = Scale Protein to cDNA
1229 label.scale_protein_to_cdna_tip = Make protein residues same width as codons in split frame views
1230 info.select_annotation_row = Select Annotation Row
1231 info.enter_search_text_here = Enter Search Text Here
1232 info.enter_search_text_to_enable = Enter Search Text to Enable
1233 info.search_in_annotation_label = Search in {0} Label
1234 info.search_in_annotation_description = Search in {0} Description
1235 info.change_threshold_mode_to_enable = Change Threshold Mode to Enable
1236 label.couldnt_read_data = Couldn't read data
1237 label.embbed_biojson = Embed BioJSON to HTML export
1238 action.export_groups = Export Groups
1239 action.export_annotations = Export Annotations
1240 action.export_hidden_columns = Export Hidden Columns
1241 action.export_hidden_sequences = Export Hidden Sequences
1242 action.export_features = Export Features
1243 label.export_settings = Export Settings
1244 label.pdb_web-service_error = PDB Web-service Error
1245 label.structure_chooser_manual_association = Structure Chooser - Manual association
1246 label.structure_chooser_filter_time = Structure Chooser - Filter time ({0})
1247 label.structure_chooser_no_of_structures = Structure Chooser - {0} Found ({1})
1248 info.no_pdb_entry_found_for = No PDB entry found for {0}
1249 exception.unable_to_detect_internet_connection = Jalview is unable to detect an internet connection
1250 exception.fts_rest_service_no_longer_available = {0} rest services no longer available!
1251 exception.resource_not_be_found = The requested resource could not be found
1252 exception.fts_server_error = There seems to be an error from the {0} server
1253 exception.fts_server_unreachable = Jalview is unable to reach the {0} server. \nPlease ensure that you are connected to the internet and try again.
1254 label.nw_mapping = Needleman & Wunsch Alignment
1255 label.sifts_mapping = SIFTs Mapping
1256 label.mapping_method = Sequence \u27f7 Structure mapping method
1257 status.waiting_for_user_to_select_output_file = Waiting for user to select {0} file
1258 status.cancelled_image_export_operation = Cancelled {0} export operation
1259 info.error_creating_file = Error creating {0} file
1260 exception.outofmemory_loading_mmcif_file = Out of memory loading mmCIF File
1261 label.run_groovy = Run Groovy console script
1262 label.run_groovy_tip = Run the script in the Groovy console over this alignment
1263 label.couldnt_run_groovy_script = Failed to run Groovy script
1264 label.uniprot_sequence_fetcher = UniProt Sequence Fetcher
1265 action.next_page= >>
1266 action.prev_page= <<
1267 label.next_page_tooltip=Next Page
1268 label.prev_page_tooltip=Previous Page
1269 exception.bad_request=Bad request. There is a problem with your input.
1270 exception.service_not_available=Service not available. The server is being updated, try again later.
1271 status.launching_3d_structure_viewer = Launching 3D Structure viewer...
1272 status.fetching_3d_structures_for_selected_entries = Fetching 3D Structures for selected entries...
1273 status.fetching_dbrefs_for_sequences_without_valid_refs = Fetching db refs for {0} sequence(s) without valid db ref required for SIFTS mapping
1274 status.fetching_3d_structures_for = Fetching 3D Structure for {0}
1275 status.obtaining_mapping_with_sifts = Obtaining mapping with SIFTS
1276 status.obtaining_mapping_with_nw_alignment = Obtaining mapping with NW alignment
1277 status.exporting_alignment_as_x_file = Exporting alignment as {0} file
1278 label.column = Column
1279 label.cant_map_cds = Unable to map CDS to protein\nCDS missing or incomplete
1280 label.operation_failed = Operation failed
1281 label.SEQUENCE_ID_no_longer_used = $SEQUENCE_ID$ is no longer used for DB accessions
1282 label.SEQUENCE_ID_for_DB_ACCESSION1 = Please review your URL links in the 'Connections' tab of the Preferences window:
1283 label.SEQUENCE_ID_for_DB_ACCESSION2 = URL links using '$SEQUENCE_ID$' for DB accessions now use '$DB_ACCESSION$'.
1284 label.do_not_display_again = Do not display this message again
1285 exception.url_cannot_have_miriam_id = {0} is a MIRIAM id and cannot be used as a custom url name
1286 exception.url_cannot_have_duplicate_id = {0} cannot be used as a label for more than one line
1287 label.filter = Filter text:
1288 action.customfilter = Custom only
1289 action.showall = Show All
1290 label.insert = Insert:
1291 action.seq_id = $SEQUENCE_ID$
1292 action.db_acc = $DB_ACCESSION$
1293 label.primary = Double Click
1294 label.inmenu = In Menu
1296 label.database = Database
1297 label.urltooltip = Only one url, which must use a sequence id, can be selected for the 'On Click' option
1298 label.edit_sequence_url_link = Edit sequence URL link
1299 warn.name_cannot_be_duplicate = User-defined URL names must be unique and cannot be MIRIAM ids
1300 label.invalid_name = Invalid Name !
1301 label.output_seq_details = Output Sequence Details to list all database references
1302 label.urllinks = Links
1303 label.togglehidden = Show hidden regions
1304 label.quality_descr = Alignment Quality based on Blosum62 scores
1305 label.conservation_descr = Conservation of total alignment less than {0}% gaps
1306 label.consensus_descr = PID
1307 label.complement_consensus_descr = PID for cDNA
1308 label.strucconsensus_descr = PID for base pairs
1309 label.occupancy_descr = Number of aligned positions