1 <?xml version="1.0" encoding="UTF-8"?>
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2 <!-- edited with XMLSpy v2006 sp1 U (http://www.altova.com) by ioh[ (o[ih[oh) -->
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3 <xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:vamsas="www.vamsas.ac.uk/jalview/version2" targetNamespace="www.vamsas.ac.uk/jalview/version2" elementFormDefault="qualified" attributeFormDefault="unqualified">
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4 <xs:complexType name="VAMSAS">
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6 <xs:element name="Tree" type="xs:string" minOccurs="0" maxOccurs="unbounded"/>
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7 <xs:element ref="vamsas:SequenceSet" minOccurs="0" maxOccurs="unbounded"/>
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10 <xs:element name="SequenceSet">
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13 <xs:element name="Sequence" minOccurs="0" maxOccurs="unbounded">
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16 <xs:extension base="vamsas:SequenceType">
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18 <xs:element name="DBRef" minOccurs="0" maxOccurs="unbounded">
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20 <xs:attribute name="source" type="xs:string"/>
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21 <xs:attribute name="version" type="xs:string"/>
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22 <xs:attribute name="accessionId" type="xs:string"/>
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27 </xs:complexContent>
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30 <xs:element name="Annotation" minOccurs="0" maxOccurs="unbounded">
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33 <xs:element ref="vamsas:annotationElement" minOccurs="0" maxOccurs="unbounded"/>
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34 <xs:element name="label" type="xs:string"/>
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35 <xs:element name="description" type="xs:string" minOccurs="0"/>
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36 <xs:element name="thresholdLine" minOccurs="0">
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38 <xs:attribute name="label" type="xs:string"/>
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39 <xs:attribute name="value" type="xs:float"/>
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40 <xs:attribute name="colour" type="xs:int"/>
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44 <xs:attribute name="graph" type="xs:boolean" use="required"/>
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45 <xs:attribute name="graphType" type="xs:int" use="optional"/>
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46 <xs:attribute name="sequenceRef" type="xs:string" use="optional"/>
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47 <xs:attribute name="graphColour" type="xs:int" use="optional"/>
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48 <xs:attribute name="graphGroup" type="xs:int" use="optional"/>
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52 <xs:attribute name="gapChar" type="xs:string" use="required"/>
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53 <xs:attribute name="aligned" type="xs:boolean" use="optional"/>
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56 <xs:element name="annotationElement">
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59 <xs:element name="displayCharacter" type="xs:string" minOccurs="0"/>
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60 <xs:element name="description" type="xs:string" minOccurs="0"/>
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61 <xs:element name="secondaryStructure" minOccurs="0">
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63 <xs:restriction base="xs:string">
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64 <xs:length value="1"/>
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68 <xs:element name="value" type="xs:float" minOccurs="0"/>
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70 <xs:attribute name="position" type="xs:int" use="required"/>
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71 <xs:attribute name="colour" type="xs:int" use="optional"/>
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74 <xs:complexType name="SequenceType">
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76 <xs:element name="sequence" type="xs:string" minOccurs="0"/>
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77 <xs:element name="name" type="xs:string" minOccurs="0"/>
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79 <xs:attribute name="id" type="xs:string"/>
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80 <xs:attribute name="description" type="xs:string"/>
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