1 Clazz.declarePackage ("jalview.viewmodel.seqfeatures");
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2 Clazz.load (null, "jalview.viewmodel.seqfeatures.FeatureRendererSettings", ["jalview.schemes.GraduatedColor", "java.util.Arrays", "java.util.concurrent.ConcurrentHashMap"], function () {
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3 c$ = Clazz.decorateAsClass (function () {
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4 this.renderOrder = null;
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5 this.featureGroups = null;
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6 this.featureColours = null;
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7 this.transparency = 0;
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8 this.featureOrder = null;
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9 Clazz.instantialize (this, arguments);
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10 }, jalview.viewmodel.seqfeatures, "FeatureRendererSettings", null, Cloneable);
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11 Clazz.makeConstructor (c$,
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12 function (renderOrder, featureGroups, featureColours, transparency, featureOrder) {
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13 this.renderOrder = java.util.Arrays.copyOf (renderOrder, renderOrder.length);
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14 this.featureGroups = new java.util.concurrent.ConcurrentHashMap (featureGroups);
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15 this.featureColours = new java.util.concurrent.ConcurrentHashMap (featureColours);
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16 this.transparency = transparency;
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17 this.featureOrder = new java.util.concurrent.ConcurrentHashMap (featureOrder);
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18 }, "~A,java.util.Hashtable,java.util.Hashtable,~N,java.util.Hashtable");
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19 Clazz.makeConstructor (c$,
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21 this.renderOrder = null;
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22 this.featureGroups = new java.util.concurrent.ConcurrentHashMap ();
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23 this.featureColours = new java.util.concurrent.ConcurrentHashMap ();
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24 this.featureOrder = new java.util.concurrent.ConcurrentHashMap ();
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25 if (fr.renderOrder != null) {
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26 this.renderOrder = new Array (fr.renderOrder.length);
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27 System.arraycopy (fr.renderOrder, 0, this.renderOrder, 0, fr.renderOrder.length);
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28 }if (fr.featureGroups != null) {
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29 this.featureGroups = new java.util.concurrent.ConcurrentHashMap (fr.featureGroups);
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30 }if (fr.featureColours != null) {
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31 this.featureColours = new java.util.concurrent.ConcurrentHashMap (fr.featureColours);
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32 }var en = fr.featureColours.keySet ().iterator ();
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33 while (en.hasNext ()) {
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34 var next = en.next ();
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35 var val = this.featureColours.get (next);
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36 if (Clazz.instanceOf (val, jalview.schemes.GraduatedColor)) {
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37 this.featureColours.put (next, new jalview.schemes.GraduatedColor (val));
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39 this.transparency = fr.transparency;
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40 if (fr.featureOrder != null) {
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41 this.featureOrder = new java.util.concurrent.ConcurrentHashMap (fr.featureOrder);
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42 }}, "jalview.viewmodel.seqfeatures.FeatureRendererModel");
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