2 * MuscleWSSoapBindingStub.java
4 * This file was auto-generated from WSDL
5 * by the Apache Axis 1.2RC2 Nov 16, 2004 (12:19:44 EST) WSDL2Java emitter.
9 * Jalview - A Sequence Alignment Editor and Viewer
10 * Copyright (C) 2006 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
12 * This program is free software; you can redistribute it and/or
13 * modify it under the terms of the GNU General Public License
14 * as published by the Free Software Foundation; either version 2
15 * of the License, or (at your option) any later version.
17 * This program is distributed in the hope that it will be useful,
18 * but WITHOUT ANY WARRANTY; without even the implied warranty of
19 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
20 * GNU General Public License for more details.
22 * You should have received a copy of the GNU General Public License
23 * along with this program; if not, write to the Free Software
24 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
28 public class MuscleWSSoapBindingStub extends org.apache.axis.client.Stub
29 implements ext.vamsas.MuscleWS {
30 static org.apache.axis.description.OperationDesc[] _operations;
33 _operations = new org.apache.axis.description.OperationDesc[4];
34 _initOperationDesc1();
37 private java.util.Vector cachedSerClasses = new java.util.Vector();
38 private java.util.Vector cachedSerQNames = new java.util.Vector();
39 private java.util.Vector cachedSerFactories = new java.util.Vector();
40 private java.util.Vector cachedDeserFactories = new java.util.Vector();
42 public MuscleWSSoapBindingStub() throws org.apache.axis.AxisFault {
46 public MuscleWSSoapBindingStub(java.net.URL endpointURL,
47 javax.xml.rpc.Service service) throws org.apache.axis.AxisFault {
49 super.cachedEndpoint = endpointURL;
52 public MuscleWSSoapBindingStub(javax.xml.rpc.Service service)
53 throws org.apache.axis.AxisFault {
54 if (service == null) {
55 super.service = new org.apache.axis.client.Service();
57 super.service = service;
61 javax.xml.namespace.QName qName;
62 java.lang.Class beansf = org.apache.axis.encoding.ser.BeanSerializerFactory.class;
63 java.lang.Class beandf = org.apache.axis.encoding.ser.BeanDeserializerFactory.class;
64 //java.lang.Class enumsf = org.apache.axis.encoding.ser.EnumSerializerFactory.class;
65 //java.lang.Class enumdf = org.apache.axis.encoding.ser.EnumDeserializerFactory.class;
66 java.lang.Class arraysf = org.apache.axis.encoding.ser.ArraySerializerFactory.class;
67 java.lang.Class arraydf = org.apache.axis.encoding.ser.ArrayDeserializerFactory.class;
68 //java.lang.Class simplesf = org.apache.axis.encoding.ser.SimpleSerializerFactory.class;
69 // java.lang.Class simpledf = org.apache.axis.encoding.ser.SimpleDeserializerFactory.class;
70 //java.lang.Class simplelistsf = org.apache.axis.encoding.ser.SimpleListSerializerFactory.class;
71 //java.lang.Class simplelistdf = org.apache.axis.encoding.ser.SimpleListDeserializerFactory.class;
72 qName = new javax.xml.namespace.QName("simple.objects.vamsas",
74 cachedSerQNames.add(qName);
75 cls = vamsas.objects.simple.Sequence.class;
76 cachedSerClasses.add(cls);
77 cachedSerFactories.add(beansf);
78 cachedDeserFactories.add(beandf);
80 qName = new javax.xml.namespace.QName("vamsas", "ArrayOf_tns1_Sequence");
81 cachedSerQNames.add(qName);
82 cls = vamsas.objects.simple.Sequence[].class;
83 cachedSerClasses.add(cls);
84 cachedSerFactories.add(arraysf);
85 cachedDeserFactories.add(arraydf);
87 qName = new javax.xml.namespace.QName("simple.objects.vamsas",
89 cachedSerQNames.add(qName);
90 cls = vamsas.objects.simple.MsaResult.class;
91 cachedSerClasses.add(cls);
92 cachedSerFactories.add(beansf);
93 cachedDeserFactories.add(beandf);
95 qName = new javax.xml.namespace.QName("simple.objects.vamsas",
97 cachedSerQNames.add(qName);
98 cls = vamsas.objects.simple.SequenceSet.class;
99 cachedSerClasses.add(cls);
100 cachedSerFactories.add(beansf);
101 cachedDeserFactories.add(beandf);
103 qName = new javax.xml.namespace.QName("http://simple.objects.vamsas",
105 cachedSerQNames.add(qName);
106 cls = vamsas.objects.simple.Object.class;
107 cachedSerClasses.add(cls);
108 cachedSerFactories.add(beansf);
109 cachedDeserFactories.add(beandf);
111 qName = new javax.xml.namespace.QName("simple.objects.vamsas",
113 cachedSerQNames.add(qName);
114 cls = vamsas.objects.simple.Alignment.class;
115 cachedSerClasses.add(cls);
116 cachedSerFactories.add(beansf);
117 cachedDeserFactories.add(beandf);
119 qName = new javax.xml.namespace.QName("simple.objects.vamsas", "WsJobId");
120 cachedSerQNames.add(qName);
121 cls = vamsas.objects.simple.WsJobId.class;
122 cachedSerClasses.add(cls);
123 cachedSerFactories.add(beansf);
124 cachedDeserFactories.add(beandf);
126 qName = new javax.xml.namespace.QName("vamsas", "ArrayOf_xsd_string");
127 cachedSerQNames.add(qName);
128 cls = java.lang.String[].class;
129 cachedSerClasses.add(cls);
130 cachedSerFactories.add(arraysf);
131 cachedDeserFactories.add(arraydf);
133 qName = new javax.xml.namespace.QName("simple.objects.vamsas", "Result");
134 cachedSerQNames.add(qName);
135 cls = vamsas.objects.simple.Result.class;
136 cachedSerClasses.add(cls);
137 cachedSerFactories.add(beansf);
138 cachedDeserFactories.add(beandf);
141 private static void _initOperationDesc1() {
142 org.apache.axis.description.OperationDesc oper;
143 oper = new org.apache.axis.description.OperationDesc();
144 oper.setName("align");
145 oper.addParameter(new javax.xml.namespace.QName("", "seqSet"),
146 new javax.xml.namespace.QName("simple.objects.vamsas", "SequenceSet"),
147 vamsas.objects.simple.SequenceSet.class,
148 org.apache.axis.description.ParameterDesc.IN, false, false);
149 oper.setReturnType(new javax.xml.namespace.QName(
150 "simple.objects.vamsas", "WsJobId"));
151 oper.setReturnClass(vamsas.objects.simple.WsJobId.class);
152 oper.setReturnQName(new javax.xml.namespace.QName("", "alignReturn"));
153 oper.setStyle(org.apache.axis.constants.Style.RPC);
154 oper.setUse(org.apache.axis.constants.Use.ENCODED);
155 _operations[0] = oper;
157 oper = new org.apache.axis.description.OperationDesc();
158 oper.setName("getalign");
159 oper.addParameter(new javax.xml.namespace.QName("", "job_id"),
160 new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema",
161 "string"), java.lang.String.class,
162 org.apache.axis.description.ParameterDesc.IN, false, false);
163 oper.setReturnType(new javax.xml.namespace.QName(
164 "simple.objects.vamsas", "Alignment"));
165 oper.setReturnClass(vamsas.objects.simple.Alignment.class);
166 oper.setReturnQName(new javax.xml.namespace.QName("", "getalignReturn"));
167 oper.setStyle(org.apache.axis.constants.Style.RPC);
168 oper.setUse(org.apache.axis.constants.Use.ENCODED);
169 _operations[1] = oper;
171 oper = new org.apache.axis.description.OperationDesc();
172 oper.setName("getResult");
173 oper.addParameter(new javax.xml.namespace.QName("", "job_id"),
174 new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema",
175 "string"), java.lang.String.class,
176 org.apache.axis.description.ParameterDesc.IN, false, false);
177 oper.setReturnType(new javax.xml.namespace.QName(
178 "simple.objects.vamsas", "MsaResult"));
179 oper.setReturnClass(vamsas.objects.simple.MsaResult.class);
180 oper.setReturnQName(new javax.xml.namespace.QName("", "getResultReturn"));
181 oper.setStyle(org.apache.axis.constants.Style.RPC);
182 oper.setUse(org.apache.axis.constants.Use.ENCODED);
183 _operations[2] = oper;
185 oper = new org.apache.axis.description.OperationDesc();
186 oper.setName("cancel");
187 oper.addParameter(new javax.xml.namespace.QName("", "jobId"),
188 new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema",
189 "string"), java.lang.String.class,
190 org.apache.axis.description.ParameterDesc.IN, false, false);
191 oper.setReturnType(new javax.xml.namespace.QName(
192 "simple.objects.vamsas", "WsJobId"));
193 oper.setReturnClass(vamsas.objects.simple.WsJobId.class);
194 oper.setReturnQName(new javax.xml.namespace.QName("", "cancelReturn"));
195 oper.setStyle(org.apache.axis.constants.Style.RPC);
196 oper.setUse(org.apache.axis.constants.Use.ENCODED);
197 _operations[3] = oper;
200 protected org.apache.axis.client.Call createCall()
201 throws java.rmi.RemoteException {
203 org.apache.axis.client.Call _call = (org.apache.axis.client.Call) super.service.createCall();
205 if (super.maintainSessionSet) {
206 _call.setMaintainSession(super.maintainSession);
209 if (super.cachedUsername != null) {
210 _call.setUsername(super.cachedUsername);
213 if (super.cachedPassword != null) {
214 _call.setPassword(super.cachedPassword);
217 if (super.cachedEndpoint != null) {
218 _call.setTargetEndpointAddress(super.cachedEndpoint);
221 if (super.cachedTimeout != null) {
222 _call.setTimeout(super.cachedTimeout);
225 if (super.cachedPortName != null) {
226 _call.setPortName(super.cachedPortName);
229 java.util.Enumeration keys = super.cachedProperties.keys();
231 while (keys.hasMoreElements()) {
232 java.lang.String key = (java.lang.String) keys.nextElement();
233 _call.setProperty(key, super.cachedProperties.get(key));
236 // All the type mapping information is registered
237 // when the first call is made.
238 // The type mapping information is actually registered in
239 // the TypeMappingRegistry of the service, which
240 // is the reason why registration is only needed for the first call.
241 synchronized (this) {
243 // must set encoding style before registering serializers
244 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
245 _call.setEncodingStyle(org.apache.axis.Constants.URI_SOAP11_ENC);
247 for (int i = 0; i < cachedSerFactories.size(); ++i) {
248 java.lang.Class cls = (java.lang.Class) cachedSerClasses.get(i);
249 javax.xml.namespace.QName qName = (javax.xml.namespace.QName) cachedSerQNames.get(i);
250 java.lang.Class sf = (java.lang.Class) cachedSerFactories.get(i);
251 java.lang.Class df = (java.lang.Class) cachedDeserFactories.get(i);
252 _call.registerTypeMapping(cls, qName, sf, df, false);
258 } catch (java.lang.Throwable _t) {
259 throw new org.apache.axis.AxisFault("Failure trying to get the Call object",
264 public vamsas.objects.simple.WsJobId align(
265 vamsas.objects.simple.SequenceSet seqSet)
266 throws java.rmi.RemoteException {
267 if (super.cachedEndpoint == null) {
268 throw new org.apache.axis.NoEndPointException();
271 org.apache.axis.client.Call _call = createCall();
272 _call.setOperation(_operations[0]);
273 _call.setUseSOAPAction(true);
274 _call.setSOAPActionURI("");
275 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
276 _call.setOperationName(new javax.xml.namespace.QName("vamsas", "align"));
278 setRequestHeaders(_call);
279 setAttachments(_call);
281 java.lang.Object _resp = _call.invoke(new java.lang.Object[] { seqSet });
283 if (_resp instanceof java.rmi.RemoteException) {
284 throw (java.rmi.RemoteException) _resp;
286 extractAttachments(_call);
289 return (vamsas.objects.simple.WsJobId) _resp;
290 } catch (java.lang.Exception _exception) {
291 return (vamsas.objects.simple.WsJobId) org.apache.axis.utils.JavaUtils.convert(_resp,
292 vamsas.objects.simple.WsJobId.class);
297 public vamsas.objects.simple.Alignment getalign(java.lang.String job_id)
298 throws java.rmi.RemoteException {
299 if (super.cachedEndpoint == null) {
300 throw new org.apache.axis.NoEndPointException();
303 org.apache.axis.client.Call _call = createCall();
304 _call.setOperation(_operations[1]);
305 _call.setUseSOAPAction(true);
306 _call.setSOAPActionURI("");
307 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
308 _call.setOperationName(new javax.xml.namespace.QName("vamsas",
311 setRequestHeaders(_call);
312 setAttachments(_call);
314 java.lang.Object _resp = _call.invoke(new java.lang.Object[] { job_id });
316 if (_resp instanceof java.rmi.RemoteException) {
317 throw (java.rmi.RemoteException) _resp;
319 extractAttachments(_call);
322 return (vamsas.objects.simple.Alignment) _resp;
323 } catch (java.lang.Exception _exception) {
324 return (vamsas.objects.simple.Alignment) org.apache.axis.utils.JavaUtils.convert(_resp,
325 vamsas.objects.simple.Alignment.class);
330 public vamsas.objects.simple.MsaResult getResult(java.lang.String job_id)
331 throws java.rmi.RemoteException {
332 if (super.cachedEndpoint == null) {
333 throw new org.apache.axis.NoEndPointException();
336 org.apache.axis.client.Call _call = createCall();
337 _call.setOperation(_operations[2]);
338 _call.setUseSOAPAction(true);
339 _call.setSOAPActionURI("");
340 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
341 _call.setOperationName(new javax.xml.namespace.QName("vamsas",
344 setRequestHeaders(_call);
345 setAttachments(_call);
347 java.lang.Object _resp = _call.invoke(new java.lang.Object[] { job_id });
349 if (_resp instanceof java.rmi.RemoteException) {
350 throw (java.rmi.RemoteException) _resp;
352 extractAttachments(_call);
355 return (vamsas.objects.simple.MsaResult) _resp;
356 } catch (java.lang.Exception _exception) {
357 return (vamsas.objects.simple.MsaResult) org.apache.axis.utils.JavaUtils.convert(_resp,
358 vamsas.objects.simple.MsaResult.class);
363 public vamsas.objects.simple.WsJobId cancel(java.lang.String jobId)
364 throws java.rmi.RemoteException {
365 if (super.cachedEndpoint == null) {
366 throw new org.apache.axis.NoEndPointException();
369 org.apache.axis.client.Call _call = createCall();
370 _call.setOperation(_operations[3]);
371 _call.setUseSOAPAction(true);
372 _call.setSOAPActionURI("");
373 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
374 _call.setOperationName(new javax.xml.namespace.QName("vamsas", "cancel"));
376 setRequestHeaders(_call);
377 setAttachments(_call);
379 java.lang.Object _resp = _call.invoke(new java.lang.Object[] { jobId });
381 if (_resp instanceof java.rmi.RemoteException) {
382 throw (java.rmi.RemoteException) _resp;
384 extractAttachments(_call);
387 return (vamsas.objects.simple.WsJobId) _resp;
388 } catch (java.lang.Exception _exception) {
389 return (vamsas.objects.simple.WsJobId) org.apache.axis.utils.JavaUtils.convert(_resp,
390 vamsas.objects.simple.WsJobId.class);