src/ext/vamsas/MuscleWSSoapBindingStub.java

   1 /**
   2  * MuscleWSSoapBindingStub.java
   3  *
   4  * This file was auto-generated from WSDL
   5  * by the Apache Axis 1.2RC2 Nov 16, 2004 (12:19:44 EST) WSDL2Java emitter.
   6  */\r
   7 \r
   8 /*
   9 * Jalview - A Sequence Alignment Editor and Viewer
  10 * Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
  11 *
  12 * This program is free software; you can redistribute it and/or
  13 * modify it under the terms of the GNU General Public License
  14 * as published by the Free Software Foundation; either version 2
  15 * of the License, or (at your option) any later version.
  16 *
  17 * This program is distributed in the hope that it will be useful,
  18 * but WITHOUT ANY WARRANTY; without even the implied warranty of
  19 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  20 * GNU General Public License for more details.
  21 *
  22 * You should have received a copy of the GNU General Public License
  23 * along with this program; if not, write to the Free Software
  24 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
  25 */\r
  26 package ext.vamsas;\r
  27 \r
  28 public class MuscleWSSoapBindingStub extends org.apache.axis.client.Stub\r
  29     implements ext.vamsas.MuscleWS {\r
  30     static org.apache.axis.description.OperationDesc[] _operations;\r
  31 \r
  32     static {\r
  33         _operations = new org.apache.axis.description.OperationDesc[4];\r
  34         _initOperationDesc1();\r
  35     }\r
  36 \r
  37     private java.util.Vector cachedSerClasses = new java.util.Vector();\r
  38     private java.util.Vector cachedSerQNames = new java.util.Vector();\r
  39     private java.util.Vector cachedSerFactories = new java.util.Vector();\r
  40     private java.util.Vector cachedDeserFactories = new java.util.Vector();\r
  41 \r
  42     public MuscleWSSoapBindingStub() throws org.apache.axis.AxisFault {\r
  43         this(null);\r
  44     }\r
  45 \r
  46     public MuscleWSSoapBindingStub(java.net.URL endpointURL,\r
  47         javax.xml.rpc.Service service) throws org.apache.axis.AxisFault {\r
  48         this(service);\r
  49         super.cachedEndpoint = endpointURL;\r
  50     }\r
  51 \r
  52     public MuscleWSSoapBindingStub(javax.xml.rpc.Service service)\r
  53         throws org.apache.axis.AxisFault {\r
  54         if (service == null) {\r
  55             super.service = new org.apache.axis.client.Service();\r
  56         } else {\r
  57             super.service = service;\r
  58         }\r
  59 \r
  60         java.lang.Class cls;\r
  61         javax.xml.namespace.QName qName;\r
  62         java.lang.Class beansf = org.apache.axis.encoding.ser.BeanSerializerFactory.class;\r
  63         java.lang.Class beandf = org.apache.axis.encoding.ser.BeanDeserializerFactory.class;\r
  64         //java.lang.Class enumsf = org.apache.axis.encoding.ser.EnumSerializerFactory.class;\r
  65         //java.lang.Class enumdf = org.apache.axis.encoding.ser.EnumDeserializerFactory.class;\r
  66         java.lang.Class arraysf = org.apache.axis.encoding.ser.ArraySerializerFactory.class;\r
  67         java.lang.Class arraydf = org.apache.axis.encoding.ser.ArrayDeserializerFactory.class;\r
  68         //java.lang.Class simplesf = org.apache.axis.encoding.ser.SimpleSerializerFactory.class;\r
  69         // java.lang.Class simpledf = org.apache.axis.encoding.ser.SimpleDeserializerFactory.class;\r
  70         //java.lang.Class simplelistsf = org.apache.axis.encoding.ser.SimpleListSerializerFactory.class;\r
  71         //java.lang.Class simplelistdf = org.apache.axis.encoding.ser.SimpleListDeserializerFactory.class;\r
  72         qName = new javax.xml.namespace.QName("simple.objects.vamsas",\r
  73                 "Sequence");\r
  74         cachedSerQNames.add(qName);\r
  75         cls = vamsas.objects.simple.Sequence.class;\r
  76         cachedSerClasses.add(cls);\r
  77         cachedSerFactories.add(beansf);\r
  78         cachedDeserFactories.add(beandf);\r
  79 \r
  80         qName = new javax.xml.namespace.QName("vamsas", "ArrayOf_tns1_Sequence");\r
  81         cachedSerQNames.add(qName);\r
  82         cls = vamsas.objects.simple.Sequence[].class;\r
  83         cachedSerClasses.add(cls);\r
  84         cachedSerFactories.add(arraysf);\r
  85         cachedDeserFactories.add(arraydf);\r
  86 \r
  87         qName = new javax.xml.namespace.QName("simple.objects.vamsas",\r
  88                 "MsaResult");\r
  89         cachedSerQNames.add(qName);\r
  90         cls = vamsas.objects.simple.MsaResult.class;\r
  91         cachedSerClasses.add(cls);\r
  92         cachedSerFactories.add(beansf);\r
  93         cachedDeserFactories.add(beandf);\r
  94 \r
  95         qName = new javax.xml.namespace.QName("simple.objects.vamsas",\r
  96                 "SequenceSet");\r
  97         cachedSerQNames.add(qName);\r
  98         cls = vamsas.objects.simple.SequenceSet.class;\r
  99         cachedSerClasses.add(cls);\r
 100         cachedSerFactories.add(beansf);\r
 101         cachedDeserFactories.add(beandf);\r
 102 \r
 103         qName = new javax.xml.namespace.QName("http://simple.objects.vamsas",\r
 104                 "Object");\r
 105         cachedSerQNames.add(qName);\r
 106         cls = vamsas.objects.simple.Object.class;\r
 107         cachedSerClasses.add(cls);\r
 108         cachedSerFactories.add(beansf);\r
 109         cachedDeserFactories.add(beandf);\r
 110 \r
 111         qName = new javax.xml.namespace.QName("simple.objects.vamsas",\r
 112                 "Alignment");\r
 113         cachedSerQNames.add(qName);\r
 114         cls = vamsas.objects.simple.Alignment.class;\r
 115         cachedSerClasses.add(cls);\r
 116         cachedSerFactories.add(beansf);\r
 117         cachedDeserFactories.add(beandf);\r
 118 \r
 119         qName = new javax.xml.namespace.QName("simple.objects.vamsas", "WsJobId");\r
 120         cachedSerQNames.add(qName);\r
 121         cls = vamsas.objects.simple.WsJobId.class;\r
 122         cachedSerClasses.add(cls);\r
 123         cachedSerFactories.add(beansf);\r
 124         cachedDeserFactories.add(beandf);\r
 125 \r
 126         qName = new javax.xml.namespace.QName("vamsas", "ArrayOf_xsd_string");\r
 127         cachedSerQNames.add(qName);\r
 128         cls = java.lang.String[].class;\r
 129         cachedSerClasses.add(cls);\r
 130         cachedSerFactories.add(arraysf);\r
 131         cachedDeserFactories.add(arraydf);\r
 132 \r
 133         qName = new javax.xml.namespace.QName("simple.objects.vamsas", "Result");\r
 134         cachedSerQNames.add(qName);\r
 135         cls = vamsas.objects.simple.Result.class;\r
 136         cachedSerClasses.add(cls);\r
 137         cachedSerFactories.add(beansf);\r
 138         cachedDeserFactories.add(beandf);\r
 139     }\r
 140 \r
 141     private static void _initOperationDesc1() {\r
 142         org.apache.axis.description.OperationDesc oper;\r
 143         oper = new org.apache.axis.description.OperationDesc();\r
 144         oper.setName("align");\r
 145         oper.addParameter(new javax.xml.namespace.QName("", "seqSet"),\r
 146             new javax.xml.namespace.QName("simple.objects.vamsas", "SequenceSet"),\r
 147             vamsas.objects.simple.SequenceSet.class,\r
 148             org.apache.axis.description.ParameterDesc.IN, false, false);\r
 149         oper.setReturnType(new javax.xml.namespace.QName(\r
 150                 "simple.objects.vamsas", "WsJobId"));\r
 151         oper.setReturnClass(vamsas.objects.simple.WsJobId.class);\r
 152         oper.setReturnQName(new javax.xml.namespace.QName("", "alignReturn"));\r
 153         oper.setStyle(org.apache.axis.constants.Style.RPC);\r
 154         oper.setUse(org.apache.axis.constants.Use.ENCODED);\r
 155         _operations[0] = oper;\r
 156 \r
 157         oper = new org.apache.axis.description.OperationDesc();\r
 158         oper.setName("getalign");\r
 159         oper.addParameter(new javax.xml.namespace.QName("", "job_id"),\r
 160             new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema",\r
 161                 "string"), java.lang.String.class,\r
 162             org.apache.axis.description.ParameterDesc.IN, false, false);\r
 163         oper.setReturnType(new javax.xml.namespace.QName(\r
 164                 "simple.objects.vamsas", "Alignment"));\r
 165         oper.setReturnClass(vamsas.objects.simple.Alignment.class);\r
 166         oper.setReturnQName(new javax.xml.namespace.QName("", "getalignReturn"));\r
 167         oper.setStyle(org.apache.axis.constants.Style.RPC);\r
 168         oper.setUse(org.apache.axis.constants.Use.ENCODED);\r
 169         _operations[1] = oper;\r
 170 \r
 171         oper = new org.apache.axis.description.OperationDesc();\r
 172         oper.setName("getResult");\r
 173         oper.addParameter(new javax.xml.namespace.QName("", "job_id"),\r
 174             new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema",\r
 175                 "string"), java.lang.String.class,\r
 176             org.apache.axis.description.ParameterDesc.IN, false, false);\r
 177         oper.setReturnType(new javax.xml.namespace.QName(\r
 178                 "simple.objects.vamsas", "MsaResult"));\r
 179         oper.setReturnClass(vamsas.objects.simple.MsaResult.class);\r
 180         oper.setReturnQName(new javax.xml.namespace.QName("", "getResultReturn"));\r
 181         oper.setStyle(org.apache.axis.constants.Style.RPC);\r
 182         oper.setUse(org.apache.axis.constants.Use.ENCODED);\r
 183         _operations[2] = oper;\r
 184 \r
 185         oper = new org.apache.axis.description.OperationDesc();\r
 186         oper.setName("cancel");\r
 187         oper.addParameter(new javax.xml.namespace.QName("", "jobId"),\r
 188             new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema",\r
 189                 "string"), java.lang.String.class,\r
 190             org.apache.axis.description.ParameterDesc.IN, false, false);\r
 191         oper.setReturnType(new javax.xml.namespace.QName(\r
 192                 "simple.objects.vamsas", "WsJobId"));\r
 193         oper.setReturnClass(vamsas.objects.simple.WsJobId.class);\r
 194         oper.setReturnQName(new javax.xml.namespace.QName("", "cancelReturn"));\r
 195         oper.setStyle(org.apache.axis.constants.Style.RPC);\r
 196         oper.setUse(org.apache.axis.constants.Use.ENCODED);\r
 197         _operations[3] = oper;\r
 198     }\r
 199 \r
 200     protected org.apache.axis.client.Call createCall()\r
 201         throws java.rmi.RemoteException {\r
 202         try {\r
 203             org.apache.axis.client.Call _call = (org.apache.axis.client.Call) super.service.createCall();\r
 204 \r
 205             if (super.maintainSessionSet) {\r
 206                 _call.setMaintainSession(super.maintainSession);\r
 207             }\r
 208 \r
 209             if (super.cachedUsername != null) {\r
 210                 _call.setUsername(super.cachedUsername);\r
 211             }\r
 212 \r
 213             if (super.cachedPassword != null) {\r
 214                 _call.setPassword(super.cachedPassword);\r
 215             }\r
 216 \r
 217             if (super.cachedEndpoint != null) {\r
 218                 _call.setTargetEndpointAddress(super.cachedEndpoint);\r
 219             }\r
 220 \r
 221             if (super.cachedTimeout != null) {\r
 222                 _call.setTimeout(super.cachedTimeout);\r
 223             }\r
 224 \r
 225             if (super.cachedPortName != null) {\r
 226                 _call.setPortName(super.cachedPortName);\r
 227             }\r
 228 \r
 229             java.util.Enumeration keys = super.cachedProperties.keys();\r
 230 \r
 231             while (keys.hasMoreElements()) {\r
 232                 java.lang.String key = (java.lang.String) keys.nextElement();\r
 233                 _call.setProperty(key, super.cachedProperties.get(key));\r
 234             }\r
 235 \r
 236             // All the type mapping information is registered\r
 237             // when the first call is made.\r
 238             // The type mapping information is actually registered in\r
 239             // the TypeMappingRegistry of the service, which\r
 240             // is the reason why registration is only needed for the first call.\r
 241             synchronized (this) {\r
 242                 if (firstCall()) {\r
 243                     // must set encoding style before registering serializers\r
 244                     _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);\r
 245                     _call.setEncodingStyle(org.apache.axis.Constants.URI_SOAP11_ENC);\r
 246 \r
 247                     for (int i = 0; i < cachedSerFactories.size(); ++i) {\r
 248                         java.lang.Class cls = (java.lang.Class) cachedSerClasses.get(i);\r
 249                         javax.xml.namespace.QName qName = (javax.xml.namespace.QName) cachedSerQNames.get(i);\r
 250                         java.lang.Class sf = (java.lang.Class) cachedSerFactories.get(i);\r
 251                         java.lang.Class df = (java.lang.Class) cachedDeserFactories.get(i);\r
 252                         _call.registerTypeMapping(cls, qName, sf, df, false);\r
 253                     }\r
 254                 }\r
 255             }\r
 256 \r
 257             return _call;\r
 258         } catch (java.lang.Throwable _t) {\r
 259             throw new org.apache.axis.AxisFault("Failure trying to get the Call object",\r
 260                 _t);\r
 261         }\r
 262     }\r
 263 \r
 264     public vamsas.objects.simple.WsJobId align(\r
 265         vamsas.objects.simple.SequenceSet seqSet)\r
 266         throws java.rmi.RemoteException {\r
 267         if (super.cachedEndpoint == null) {\r
 268             throw new org.apache.axis.NoEndPointException();\r
 269         }\r
 270 \r
 271         org.apache.axis.client.Call _call = createCall();\r
 272         _call.setOperation(_operations[0]);\r
 273         _call.setUseSOAPAction(true);\r
 274         _call.setSOAPActionURI("");\r
 275         _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);\r
 276         _call.setOperationName(new javax.xml.namespace.QName("vamsas", "align"));\r
 277 \r
 278         setRequestHeaders(_call);\r
 279         setAttachments(_call);\r
 280 \r
 281         java.lang.Object _resp = _call.invoke(new java.lang.Object[] { seqSet });\r
 282 \r
 283         if (_resp instanceof java.rmi.RemoteException) {\r
 284             throw (java.rmi.RemoteException) _resp;\r
 285         } else {\r
 286             extractAttachments(_call);\r
 287 \r
 288             try {\r
 289                 return (vamsas.objects.simple.WsJobId) _resp;\r
 290             } catch (java.lang.Exception _exception) {\r
 291                 return (vamsas.objects.simple.WsJobId) org.apache.axis.utils.JavaUtils.convert(_resp,\r
 292                     vamsas.objects.simple.WsJobId.class);\r
 293             }\r
 294         }\r
 295     }\r
 296 \r
 297     public vamsas.objects.simple.Alignment getalign(java.lang.String job_id)\r
 298         throws java.rmi.RemoteException {\r
 299         if (super.cachedEndpoint == null) {\r
 300             throw new org.apache.axis.NoEndPointException();\r
 301         }\r
 302 \r
 303         org.apache.axis.client.Call _call = createCall();\r
 304         _call.setOperation(_operations[1]);\r
 305         _call.setUseSOAPAction(true);\r
 306         _call.setSOAPActionURI("");\r
 307         _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);\r
 308         _call.setOperationName(new javax.xml.namespace.QName("vamsas",\r
 309                 "getalign"));\r
 310 \r
 311         setRequestHeaders(_call);\r
 312         setAttachments(_call);\r
 313 \r
 314         java.lang.Object _resp = _call.invoke(new java.lang.Object[] { job_id });\r
 315 \r
 316         if (_resp instanceof java.rmi.RemoteException) {\r
 317             throw (java.rmi.RemoteException) _resp;\r
 318         } else {\r
 319             extractAttachments(_call);\r
 320 \r
 321             try {\r
 322                 return (vamsas.objects.simple.Alignment) _resp;\r
 323             } catch (java.lang.Exception _exception) {\r
 324                 return (vamsas.objects.simple.Alignment) org.apache.axis.utils.JavaUtils.convert(_resp,\r
 325                     vamsas.objects.simple.Alignment.class);\r
 326             }\r
 327         }\r
 328     }\r
 329 \r
 330     public vamsas.objects.simple.MsaResult getResult(java.lang.String job_id)\r
 331         throws java.rmi.RemoteException {\r
 332         if (super.cachedEndpoint == null) {\r
 333             throw new org.apache.axis.NoEndPointException();\r
 334         }\r
 335 \r
 336         org.apache.axis.client.Call _call = createCall();\r
 337         _call.setOperation(_operations[2]);\r
 338         _call.setUseSOAPAction(true);\r
 339         _call.setSOAPActionURI("");\r
 340         _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);\r
 341         _call.setOperationName(new javax.xml.namespace.QName("vamsas",\r
 342                 "getResult"));\r
 343 \r
 344         setRequestHeaders(_call);\r
 345         setAttachments(_call);\r
 346 \r
 347         java.lang.Object _resp = _call.invoke(new java.lang.Object[] { job_id });\r
 348 \r
 349         if (_resp instanceof java.rmi.RemoteException) {\r
 350             throw (java.rmi.RemoteException) _resp;\r
 351         } else {\r
 352             extractAttachments(_call);\r
 353 \r
 354             try {\r
 355                 return (vamsas.objects.simple.MsaResult) _resp;\r
 356             } catch (java.lang.Exception _exception) {\r
 357                 return (vamsas.objects.simple.MsaResult) org.apache.axis.utils.JavaUtils.convert(_resp,\r
 358                     vamsas.objects.simple.MsaResult.class);\r
 359             }\r
 360         }\r
 361     }\r
 362 \r
 363     public vamsas.objects.simple.WsJobId cancel(java.lang.String jobId)\r
 364         throws java.rmi.RemoteException {\r
 365         if (super.cachedEndpoint == null) {\r
 366             throw new org.apache.axis.NoEndPointException();\r
 367         }\r
 368 \r
 369         org.apache.axis.client.Call _call = createCall();\r
 370         _call.setOperation(_operations[3]);\r
 371         _call.setUseSOAPAction(true);\r
 372         _call.setSOAPActionURI("");\r
 373         _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);\r
 374         _call.setOperationName(new javax.xml.namespace.QName("vamsas", "cancel"));\r
 375 \r
 376         setRequestHeaders(_call);\r
 377         setAttachments(_call);\r
 378 \r
 379         java.lang.Object _resp = _call.invoke(new java.lang.Object[] { jobId });\r
 380 \r
 381         if (_resp instanceof java.rmi.RemoteException) {\r
 382             throw (java.rmi.RemoteException) _resp;\r
 383         } else {\r
 384             extractAttachments(_call);\r
 385 \r
 386             try {\r
 387                 return (vamsas.objects.simple.WsJobId) _resp;\r
 388             } catch (java.lang.Exception _exception) {\r
 389                 return (vamsas.objects.simple.WsJobId) org.apache.axis.utils.JavaUtils.convert(_resp,\r
 390                     vamsas.objects.simple.WsJobId.class);\r
 391             }\r
 392         }\r
 393     }\r
 394 }\r