2 * MuscleWSSoapBindingStub.java
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4 * This file was auto-generated from WSDL
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5 * by the Apache Axis 1.2RC2 Nov 16, 2004 (12:19:44 EST) WSDL2Java emitter.
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9 * Jalview - A Sequence Alignment Editor and Viewer
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10 * Copyright (C) 2007 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
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12 * This program is free software; you can redistribute it and/or
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13 * modify it under the terms of the GNU General Public License
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14 * as published by the Free Software Foundation; either version 2
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15 * of the License, or (at your option) any later version.
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17 * This program is distributed in the hope that it will be useful,
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18 * but WITHOUT ANY WARRANTY; without even the implied warranty of
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19 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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20 * GNU General Public License for more details.
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22 * You should have received a copy of the GNU General Public License
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23 * along with this program; if not, write to the Free Software
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24 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
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28 public class MuscleWSSoapBindingStub
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29 extends org.apache.axis.client.Stub implements ext.vamsas.MuscleWS
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31 static org.apache.axis.description.OperationDesc[] _operations;
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35 _operations = new org.apache.axis.description.OperationDesc[4];
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36 _initOperationDesc1();
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39 private java.util.Vector cachedSerClasses = new java.util.Vector();
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40 private java.util.Vector cachedSerQNames = new java.util.Vector();
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41 private java.util.Vector cachedSerFactories = new java.util.Vector();
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42 private java.util.Vector cachedDeserFactories = new java.util.Vector();
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44 public MuscleWSSoapBindingStub()
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45 throws org.apache.axis.AxisFault
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50 public MuscleWSSoapBindingStub(java.net.URL endpointURL,
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51 javax.xml.rpc.Service service)
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52 throws org.apache.axis.AxisFault
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55 super.cachedEndpoint = endpointURL;
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58 public MuscleWSSoapBindingStub(javax.xml.rpc.Service service)
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59 throws org.apache.axis.AxisFault
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61 if (service == null)
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63 super.service = new org.apache.axis.client.Service();
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67 super.service = service;
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70 java.lang.Class cls;
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71 javax.xml.namespace.QName qName;
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72 java.lang.Class beansf = org.apache.axis.encoding.ser.BeanSerializerFactory.class;
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73 java.lang.Class beandf = org.apache.axis.encoding.ser.
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74 BeanDeserializerFactory.class;
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75 //java.lang.Class enumsf = org.apache.axis.encoding.ser.EnumSerializerFactory.class;
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76 //java.lang.Class enumdf = org.apache.axis.encoding.ser.EnumDeserializerFactory.class;
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77 java.lang.Class arraysf = org.apache.axis.encoding.ser.
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78 ArraySerializerFactory.class;
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79 java.lang.Class arraydf = org.apache.axis.encoding.ser.
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80 ArrayDeserializerFactory.class;
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81 //java.lang.Class simplesf = org.apache.axis.encoding.ser.SimpleSerializerFactory.class;
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82 // java.lang.Class simpledf = org.apache.axis.encoding.ser.SimpleDeserializerFactory.class;
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83 //java.lang.Class simplelistsf = org.apache.axis.encoding.ser.SimpleListSerializerFactory.class;
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84 //java.lang.Class simplelistdf = org.apache.axis.encoding.ser.SimpleListDeserializerFactory.class;
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85 qName = new javax.xml.namespace.QName("simple.objects.vamsas",
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87 cachedSerQNames.add(qName);
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88 cls = vamsas.objects.simple.Sequence.class;
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89 cachedSerClasses.add(cls);
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90 cachedSerFactories.add(beansf);
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91 cachedDeserFactories.add(beandf);
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93 qName = new javax.xml.namespace.QName("vamsas", "ArrayOf_tns1_Sequence");
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94 cachedSerQNames.add(qName);
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95 cls = vamsas.objects.simple.Sequence[].class;
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96 cachedSerClasses.add(cls);
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97 cachedSerFactories.add(arraysf);
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98 cachedDeserFactories.add(arraydf);
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100 qName = new javax.xml.namespace.QName("simple.objects.vamsas",
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102 cachedSerQNames.add(qName);
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103 cls = vamsas.objects.simple.MsaResult.class;
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104 cachedSerClasses.add(cls);
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105 cachedSerFactories.add(beansf);
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106 cachedDeserFactories.add(beandf);
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108 qName = new javax.xml.namespace.QName("simple.objects.vamsas",
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110 cachedSerQNames.add(qName);
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111 cls = vamsas.objects.simple.SequenceSet.class;
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112 cachedSerClasses.add(cls);
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113 cachedSerFactories.add(beansf);
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114 cachedDeserFactories.add(beandf);
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116 qName = new javax.xml.namespace.QName("http://simple.objects.vamsas",
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118 cachedSerQNames.add(qName);
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119 cls = vamsas.objects.simple.Object.class;
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120 cachedSerClasses.add(cls);
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121 cachedSerFactories.add(beansf);
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122 cachedDeserFactories.add(beandf);
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124 qName = new javax.xml.namespace.QName("simple.objects.vamsas",
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126 cachedSerQNames.add(qName);
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127 cls = vamsas.objects.simple.Alignment.class;
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128 cachedSerClasses.add(cls);
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129 cachedSerFactories.add(beansf);
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130 cachedDeserFactories.add(beandf);
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132 qName = new javax.xml.namespace.QName("simple.objects.vamsas", "WsJobId");
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133 cachedSerQNames.add(qName);
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134 cls = vamsas.objects.simple.WsJobId.class;
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135 cachedSerClasses.add(cls);
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136 cachedSerFactories.add(beansf);
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137 cachedDeserFactories.add(beandf);
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139 qName = new javax.xml.namespace.QName("vamsas", "ArrayOf_xsd_string");
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140 cachedSerQNames.add(qName);
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141 cls = java.lang.String[].class;
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142 cachedSerClasses.add(cls);
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143 cachedSerFactories.add(arraysf);
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144 cachedDeserFactories.add(arraydf);
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146 qName = new javax.xml.namespace.QName("simple.objects.vamsas", "Result");
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147 cachedSerQNames.add(qName);
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148 cls = vamsas.objects.simple.Result.class;
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149 cachedSerClasses.add(cls);
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150 cachedSerFactories.add(beansf);
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151 cachedDeserFactories.add(beandf);
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154 private static void _initOperationDesc1()
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156 org.apache.axis.description.OperationDesc oper;
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157 oper = new org.apache.axis.description.OperationDesc();
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158 oper.setName("align");
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159 oper.addParameter(new javax.xml.namespace.QName("", "seqSet"),
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160 new javax.xml.namespace.QName("simple.objects.vamsas",
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162 vamsas.objects.simple.SequenceSet.class,
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163 org.apache.axis.description.ParameterDesc.IN, false, false);
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164 oper.setReturnType(new javax.xml.namespace.QName(
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165 "simple.objects.vamsas", "WsJobId"));
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166 oper.setReturnClass(vamsas.objects.simple.WsJobId.class);
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167 oper.setReturnQName(new javax.xml.namespace.QName("", "alignReturn"));
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168 oper.setStyle(org.apache.axis.constants.Style.RPC);
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169 oper.setUse(org.apache.axis.constants.Use.ENCODED);
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170 _operations[0] = oper;
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172 oper = new org.apache.axis.description.OperationDesc();
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173 oper.setName("getalign");
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174 oper.addParameter(new javax.xml.namespace.QName("", "job_id"),
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175 new javax.xml.namespace.QName(
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176 "http://www.w3.org/2001/XMLSchema",
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177 "string"), java.lang.String.class,
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178 org.apache.axis.description.ParameterDesc.IN, false, false);
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179 oper.setReturnType(new javax.xml.namespace.QName(
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180 "simple.objects.vamsas", "Alignment"));
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181 oper.setReturnClass(vamsas.objects.simple.Alignment.class);
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182 oper.setReturnQName(new javax.xml.namespace.QName("", "getalignReturn"));
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183 oper.setStyle(org.apache.axis.constants.Style.RPC);
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184 oper.setUse(org.apache.axis.constants.Use.ENCODED);
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185 _operations[1] = oper;
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187 oper = new org.apache.axis.description.OperationDesc();
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188 oper.setName("getResult");
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189 oper.addParameter(new javax.xml.namespace.QName("", "job_id"),
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190 new javax.xml.namespace.QName(
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191 "http://www.w3.org/2001/XMLSchema",
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192 "string"), java.lang.String.class,
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193 org.apache.axis.description.ParameterDesc.IN, false, false);
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194 oper.setReturnType(new javax.xml.namespace.QName(
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195 "simple.objects.vamsas", "MsaResult"));
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196 oper.setReturnClass(vamsas.objects.simple.MsaResult.class);
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197 oper.setReturnQName(new javax.xml.namespace.QName("", "getResultReturn"));
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198 oper.setStyle(org.apache.axis.constants.Style.RPC);
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199 oper.setUse(org.apache.axis.constants.Use.ENCODED);
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200 _operations[2] = oper;
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202 oper = new org.apache.axis.description.OperationDesc();
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203 oper.setName("cancel");
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204 oper.addParameter(new javax.xml.namespace.QName("", "jobId"),
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205 new javax.xml.namespace.QName(
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206 "http://www.w3.org/2001/XMLSchema",
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207 "string"), java.lang.String.class,
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208 org.apache.axis.description.ParameterDesc.IN, false, false);
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209 oper.setReturnType(new javax.xml.namespace.QName(
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210 "simple.objects.vamsas", "WsJobId"));
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211 oper.setReturnClass(vamsas.objects.simple.WsJobId.class);
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212 oper.setReturnQName(new javax.xml.namespace.QName("", "cancelReturn"));
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213 oper.setStyle(org.apache.axis.constants.Style.RPC);
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214 oper.setUse(org.apache.axis.constants.Use.ENCODED);
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215 _operations[3] = oper;
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218 protected org.apache.axis.client.Call createCall()
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219 throws java.rmi.RemoteException
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223 org.apache.axis.client.Call _call = (org.apache.axis.client.Call)super.
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224 service.createCall();
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226 if (super.maintainSessionSet)
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228 _call.setMaintainSession(super.maintainSession);
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231 if (super.cachedUsername != null)
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233 _call.setUsername(super.cachedUsername);
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236 if (super.cachedPassword != null)
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238 _call.setPassword(super.cachedPassword);
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241 if (super.cachedEndpoint != null)
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243 _call.setTargetEndpointAddress(super.cachedEndpoint);
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246 if (super.cachedTimeout != null)
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248 _call.setTimeout(super.cachedTimeout);
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251 if (super.cachedPortName != null)
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253 _call.setPortName(super.cachedPortName);
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256 java.util.Enumeration keys = super.cachedProperties.keys();
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258 while (keys.hasMoreElements())
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260 java.lang.String key = (java.lang.String) keys.nextElement();
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261 _call.setProperty(key, super.cachedProperties.get(key));
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264 // All the type mapping information is registered
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265 // when the first call is made.
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266 // The type mapping information is actually registered in
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267 // the TypeMappingRegistry of the service, which
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268 // is the reason why registration is only needed for the first call.
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269 synchronized (this)
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273 // must set encoding style before registering serializers
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274 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.
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276 _call.setEncodingStyle(org.apache.axis.Constants.URI_SOAP11_ENC);
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278 for (int i = 0; i < cachedSerFactories.size(); ++i)
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280 java.lang.Class cls = (java.lang.Class) cachedSerClasses.get(i);
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281 javax.xml.namespace.QName qName = (javax.xml.namespace.QName)
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282 cachedSerQNames.get(i);
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283 java.lang.Class sf = (java.lang.Class) cachedSerFactories.get(i);
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284 java.lang.Class df = (java.lang.Class) cachedDeserFactories.get(i);
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285 _call.registerTypeMapping(cls, qName, sf, df, false);
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292 catch (java.lang.Throwable _t)
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294 throw new org.apache.axis.AxisFault(
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295 "Failure trying to get the Call object",
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300 public vamsas.objects.simple.WsJobId align(
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301 vamsas.objects.simple.SequenceSet seqSet)
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302 throws java.rmi.RemoteException
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304 if (super.cachedEndpoint == null)
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306 throw new org.apache.axis.NoEndPointException();
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309 org.apache.axis.client.Call _call = createCall();
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310 _call.setOperation(_operations[0]);
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311 _call.setUseSOAPAction(true);
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312 _call.setSOAPActionURI("");
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313 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
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314 _call.setOperationName(new javax.xml.namespace.QName("vamsas", "align"));
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316 setRequestHeaders(_call);
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317 setAttachments(_call);
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319 java.lang.Object _resp = _call.invoke(new java.lang.Object[]
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322 if (_resp instanceof java.rmi.RemoteException)
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324 throw (java.rmi.RemoteException) _resp;
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328 extractAttachments(_call);
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332 return (vamsas.objects.simple.WsJobId) _resp;
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334 catch (java.lang.Exception _exception)
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336 return (vamsas.objects.simple.WsJobId) org.apache.axis.utils.JavaUtils.
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338 vamsas.objects.simple.WsJobId.class);
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343 public vamsas.objects.simple.Alignment getalign(java.lang.String job_id)
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344 throws java.rmi.RemoteException
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346 if (super.cachedEndpoint == null)
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348 throw new org.apache.axis.NoEndPointException();
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351 org.apache.axis.client.Call _call = createCall();
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352 _call.setOperation(_operations[1]);
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353 _call.setUseSOAPAction(true);
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354 _call.setSOAPActionURI("");
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355 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
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356 _call.setOperationName(new javax.xml.namespace.QName("vamsas",
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359 setRequestHeaders(_call);
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360 setAttachments(_call);
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362 java.lang.Object _resp = _call.invoke(new java.lang.Object[]
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365 if (_resp instanceof java.rmi.RemoteException)
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367 throw (java.rmi.RemoteException) _resp;
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371 extractAttachments(_call);
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375 return (vamsas.objects.simple.Alignment) _resp;
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377 catch (java.lang.Exception _exception)
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379 return (vamsas.objects.simple.Alignment) org.apache.axis.utils.
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380 JavaUtils.convert(_resp,
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381 vamsas.objects.simple.Alignment.class);
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386 public vamsas.objects.simple.MsaResult getResult(java.lang.String job_id)
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387 throws java.rmi.RemoteException
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389 if (super.cachedEndpoint == null)
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391 throw new org.apache.axis.NoEndPointException();
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394 org.apache.axis.client.Call _call = createCall();
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395 _call.setOperation(_operations[2]);
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396 _call.setUseSOAPAction(true);
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397 _call.setSOAPActionURI("");
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398 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
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399 _call.setOperationName(new javax.xml.namespace.QName("vamsas",
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402 setRequestHeaders(_call);
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403 setAttachments(_call);
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405 java.lang.Object _resp = _call.invoke(new java.lang.Object[]
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408 if (_resp instanceof java.rmi.RemoteException)
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410 throw (java.rmi.RemoteException) _resp;
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414 extractAttachments(_call);
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418 return (vamsas.objects.simple.MsaResult) _resp;
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420 catch (java.lang.Exception _exception)
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422 return (vamsas.objects.simple.MsaResult) org.apache.axis.utils.
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423 JavaUtils.convert(_resp,
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424 vamsas.objects.simple.MsaResult.class);
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429 public vamsas.objects.simple.WsJobId cancel(java.lang.String jobId)
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430 throws java.rmi.RemoteException
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432 if (super.cachedEndpoint == null)
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434 throw new org.apache.axis.NoEndPointException();
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437 org.apache.axis.client.Call _call = createCall();
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438 _call.setOperation(_operations[3]);
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439 _call.setUseSOAPAction(true);
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440 _call.setSOAPActionURI("");
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441 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
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442 _call.setOperationName(new javax.xml.namespace.QName("vamsas", "cancel"));
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444 setRequestHeaders(_call);
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445 setAttachments(_call);
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447 java.lang.Object _resp = _call.invoke(new java.lang.Object[]
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450 if (_resp instanceof java.rmi.RemoteException)
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452 throw (java.rmi.RemoteException) _resp;
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456 extractAttachments(_call);
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460 return (vamsas.objects.simple.WsJobId) _resp;
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462 catch (java.lang.Exception _exception)
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464 return (vamsas.objects.simple.WsJobId) org.apache.axis.utils.JavaUtils.
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466 vamsas.objects.simple.WsJobId.class);
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