2 * ScanPSServiceSoapBindingStub.java
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4 * This file was auto-generated from WSDL
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5 * by the Apache Axis 1.2RC2 Nov 16, 2004 (12:19:44 EST) WSDL2Java emitter.
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10 public class SeqSearchServiceSoapBindingStub extends org.apache.axis.client.Stub implements ext.vamsas.SeqSearchI {
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11 private java.util.Vector cachedSerClasses = new java.util.Vector();
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12 private java.util.Vector cachedSerQNames = new java.util.Vector();
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13 private java.util.Vector cachedSerFactories = new java.util.Vector();
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14 private java.util.Vector cachedDeserFactories = new java.util.Vector();
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16 static org.apache.axis.description.OperationDesc [] _operations;
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19 _operations = new org.apache.axis.description.OperationDesc[5];
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20 _initOperationDesc1();
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23 private static void _initOperationDesc1(){
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24 org.apache.axis.description.OperationDesc oper;
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25 oper = new org.apache.axis.description.OperationDesc();
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26 oper.setName("getDatabase");
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27 oper.setReturnType(new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"));
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28 oper.setReturnClass(java.lang.String.class);
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29 oper.setReturnQName(new javax.xml.namespace.QName("", "getDatabaseReturn"));
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30 oper.setStyle(org.apache.axis.constants.Style.RPC);
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31 oper.setUse(org.apache.axis.constants.Use.ENCODED);
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32 _operations[0] = oper;
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34 oper = new org.apache.axis.description.OperationDesc();
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35 oper.setName("getResult");
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36 oper.addParameter(new javax.xml.namespace.QName("", "job_id"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
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37 oper.setReturnType(new javax.xml.namespace.QName("simple.objects.vamsas", "SeqSearchResult"));
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38 oper.setReturnClass(vamsas.objects.simple.SeqSearchResult.class);
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39 oper.setReturnQName(new javax.xml.namespace.QName("", "getResultReturn"));
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40 oper.setStyle(org.apache.axis.constants.Style.RPC);
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41 oper.setUse(org.apache.axis.constants.Use.ENCODED);
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42 _operations[1] = oper;
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44 oper = new org.apache.axis.description.OperationDesc();
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45 oper.setName("psearch");
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46 oper.addParameter(new javax.xml.namespace.QName("", "al"), new javax.xml.namespace.QName("simple.objects.vamsas", "Alignment"), vamsas.objects.simple.Alignment.class, org.apache.axis.description.ParameterDesc.IN, false, false);
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47 oper.addParameter(new javax.xml.namespace.QName("", "database"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
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48 oper.setReturnType(new javax.xml.namespace.QName("simple.objects.vamsas", "WsJobId"));
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49 oper.setReturnClass(vamsas.objects.simple.WsJobId.class);
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50 oper.setReturnQName(new javax.xml.namespace.QName("", "psearchReturn"));
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51 oper.setStyle(org.apache.axis.constants.Style.RPC);
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52 oper.setUse(org.apache.axis.constants.Use.ENCODED);
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53 _operations[2] = oper;
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55 oper = new org.apache.axis.description.OperationDesc();
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56 oper.setName("search");
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57 oper.addParameter(new javax.xml.namespace.QName("", "s"), new javax.xml.namespace.QName("simple.objects.vamsas", "Sequence"), vamsas.objects.simple.Sequence.class, org.apache.axis.description.ParameterDesc.IN, false, false);
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58 oper.addParameter(new javax.xml.namespace.QName("", "database"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
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59 oper.setReturnType(new javax.xml.namespace.QName("simple.objects.vamsas", "WsJobId"));
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60 oper.setReturnClass(vamsas.objects.simple.WsJobId.class);
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61 oper.setReturnQName(new javax.xml.namespace.QName("", "searchReturn"));
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62 oper.setStyle(org.apache.axis.constants.Style.RPC);
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63 oper.setUse(org.apache.axis.constants.Use.ENCODED);
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64 _operations[3] = oper;
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66 oper = new org.apache.axis.description.OperationDesc();
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67 oper.setName("cancel");
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68 oper.addParameter(new javax.xml.namespace.QName("", "jobId"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
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69 oper.setReturnType(new javax.xml.namespace.QName("simple.objects.vamsas", "WsJobId"));
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70 oper.setReturnClass(vamsas.objects.simple.WsJobId.class);
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71 oper.setReturnQName(new javax.xml.namespace.QName("", "cancelReturn"));
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72 oper.setStyle(org.apache.axis.constants.Style.RPC);
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73 oper.setUse(org.apache.axis.constants.Use.ENCODED);
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74 _operations[4] = oper;
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78 public SeqSearchServiceSoapBindingStub() throws org.apache.axis.AxisFault {
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82 public SeqSearchServiceSoapBindingStub(java.net.URL endpointURL, javax.xml.rpc.Service service) throws org.apache.axis.AxisFault {
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84 super.cachedEndpoint = endpointURL;
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87 public SeqSearchServiceSoapBindingStub(javax.xml.rpc.Service service) throws org.apache.axis.AxisFault {
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88 if (service == null) {
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89 super.service = new org.apache.axis.client.Service();
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91 super.service = service;
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93 java.lang.Class cls;
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94 javax.xml.namespace.QName qName;
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95 java.lang.Class beansf = org.apache.axis.encoding.ser.BeanSerializerFactory.class;
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96 java.lang.Class beandf = org.apache.axis.encoding.ser.BeanDeserializerFactory.class;
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97 java.lang.Class enumsf = org.apache.axis.encoding.ser.EnumSerializerFactory.class;
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98 java.lang.Class enumdf = org.apache.axis.encoding.ser.EnumDeserializerFactory.class;
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99 java.lang.Class arraysf = org.apache.axis.encoding.ser.ArraySerializerFactory.class;
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100 java.lang.Class arraydf = org.apache.axis.encoding.ser.ArrayDeserializerFactory.class;
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101 java.lang.Class simplesf = org.apache.axis.encoding.ser.SimpleSerializerFactory.class;
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102 java.lang.Class simpledf = org.apache.axis.encoding.ser.SimpleDeserializerFactory.class;
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103 java.lang.Class simplelistsf = org.apache.axis.encoding.ser.SimpleListSerializerFactory.class;
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104 java.lang.Class simplelistdf = org.apache.axis.encoding.ser.SimpleListDeserializerFactory.class;
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105 qName = new javax.xml.namespace.QName("simple.objects.vamsas", "Result");
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106 cachedSerQNames.add(qName);
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107 cls = vamsas.objects.simple.Result.class;
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108 cachedSerClasses.add(cls);
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109 cachedSerFactories.add(beansf);
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110 cachedDeserFactories.add(beandf);
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112 qName = new javax.xml.namespace.QName("simple.objects.vamsas", "WsJobId");
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113 cachedSerQNames.add(qName);
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114 cls = vamsas.objects.simple.WsJobId.class;
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115 cachedSerClasses.add(cls);
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116 cachedSerFactories.add(beansf);
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117 cachedDeserFactories.add(beandf);
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119 qName = new javax.xml.namespace.QName("http://simple.objects.vamsas", "Object");
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120 cachedSerQNames.add(qName);
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121 cls = vamsas.objects.simple.Object.class;
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122 cachedSerClasses.add(cls);
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123 cachedSerFactories.add(beansf);
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124 cachedDeserFactories.add(beandf);
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126 qName = new javax.xml.namespace.QName("vamsas", "ArrayOf_xsd_string");
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127 cachedSerQNames.add(qName);
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128 cls = java.lang.String[].class;
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129 cachedSerClasses.add(cls);
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130 cachedSerFactories.add(arraysf);
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131 cachedDeserFactories.add(arraydf);
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133 qName = new javax.xml.namespace.QName("simple.objects.vamsas", "Alignment");
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134 cachedSerQNames.add(qName);
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135 cls = vamsas.objects.simple.Alignment.class;
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136 cachedSerClasses.add(cls);
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137 cachedSerFactories.add(beansf);
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138 cachedDeserFactories.add(beandf);
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140 qName = new javax.xml.namespace.QName("simple.objects.vamsas", "Sequence");
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141 cachedSerQNames.add(qName);
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142 cls = vamsas.objects.simple.Sequence.class;
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143 cachedSerClasses.add(cls);
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144 cachedSerFactories.add(beansf);
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145 cachedDeserFactories.add(beandf);
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147 qName = new javax.xml.namespace.QName("vamsas", "ArrayOf_tns1_Sequence");
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148 cachedSerQNames.add(qName);
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149 cls = vamsas.objects.simple.Sequence[].class;
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150 cachedSerClasses.add(cls);
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151 cachedSerFactories.add(arraysf);
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152 cachedDeserFactories.add(arraydf);
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154 qName = new javax.xml.namespace.QName("simple.objects.vamsas", "SeqSearchResult");
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155 cachedSerQNames.add(qName);
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156 cls = vamsas.objects.simple.SeqSearchResult.class;
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157 cachedSerClasses.add(cls);
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158 cachedSerFactories.add(beansf);
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159 cachedDeserFactories.add(beandf);
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161 qName = new javax.xml.namespace.QName("simple.objects.vamsas", "SequenceSet");
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162 cachedSerQNames.add(qName);
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163 cls = vamsas.objects.simple.SequenceSet.class;
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164 cachedSerClasses.add(cls);
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165 cachedSerFactories.add(beansf);
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166 cachedDeserFactories.add(beandf);
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170 protected org.apache.axis.client.Call createCall() throws java.rmi.RemoteException {
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172 org.apache.axis.client.Call _call =
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173 (org.apache.axis.client.Call) super.service.createCall();
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174 if (super.maintainSessionSet) {
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175 _call.setMaintainSession(super.maintainSession);
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177 if (super.cachedUsername != null) {
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178 _call.setUsername(super.cachedUsername);
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180 if (super.cachedPassword != null) {
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181 _call.setPassword(super.cachedPassword);
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183 if (super.cachedEndpoint != null) {
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184 _call.setTargetEndpointAddress(super.cachedEndpoint);
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186 if (super.cachedTimeout != null) {
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187 _call.setTimeout(super.cachedTimeout);
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189 if (super.cachedPortName != null) {
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190 _call.setPortName(super.cachedPortName);
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192 java.util.Enumeration keys = super.cachedProperties.keys();
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193 while (keys.hasMoreElements()) {
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194 java.lang.String key = (java.lang.String) keys.nextElement();
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195 _call.setProperty(key, super.cachedProperties.get(key));
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197 // All the type mapping information is registered
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198 // when the first call is made.
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199 // The type mapping information is actually registered in
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200 // the TypeMappingRegistry of the service, which
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201 // is the reason why registration is only needed for the first call.
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202 synchronized (this) {
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204 // must set encoding style before registering serializers
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205 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
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206 _call.setEncodingStyle(org.apache.axis.Constants.URI_SOAP11_ENC);
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207 for (int i = 0; i < cachedSerFactories.size(); ++i) {
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208 java.lang.Class cls = (java.lang.Class) cachedSerClasses.get(i);
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209 javax.xml.namespace.QName qName =
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210 (javax.xml.namespace.QName) cachedSerQNames.get(i);
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211 java.lang.Class sf = (java.lang.Class)
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212 cachedSerFactories.get(i);
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213 java.lang.Class df = (java.lang.Class)
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214 cachedDeserFactories.get(i);
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215 _call.registerTypeMapping(cls, qName, sf, df, false);
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221 catch (java.lang.Throwable _t) {
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222 throw new org.apache.axis.AxisFault("Failure trying to get the Call object", _t);
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226 public java.lang.String getDatabase() throws java.rmi.RemoteException {
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227 if (super.cachedEndpoint == null) {
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228 throw new org.apache.axis.NoEndPointException();
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230 org.apache.axis.client.Call _call = createCall();
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231 _call.setOperation(_operations[0]);
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232 _call.setUseSOAPAction(true);
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233 _call.setSOAPActionURI("");
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234 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
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235 _call.setOperationName(new javax.xml.namespace.QName("vamsas", "getDatabase"));
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237 setRequestHeaders(_call);
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238 setAttachments(_call);
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239 java.lang.Object _resp = _call.invoke(new java.lang.Object[] {});
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241 if (_resp instanceof java.rmi.RemoteException) {
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242 throw (java.rmi.RemoteException)_resp;
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245 extractAttachments(_call);
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247 return (java.lang.String) _resp;
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248 } catch (java.lang.Exception _exception) {
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249 return (java.lang.String) org.apache.axis.utils.JavaUtils.convert(_resp, java.lang.String.class);
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254 public vamsas.objects.simple.SeqSearchResult getResult(java.lang.String job_id) throws java.rmi.RemoteException {
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255 if (super.cachedEndpoint == null) {
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256 throw new org.apache.axis.NoEndPointException();
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258 org.apache.axis.client.Call _call = createCall();
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259 _call.setOperation(_operations[1]);
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260 _call.setUseSOAPAction(true);
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261 _call.setSOAPActionURI("");
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262 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
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263 _call.setOperationName(new javax.xml.namespace.QName("vamsas", "getResult"));
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265 setRequestHeaders(_call);
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266 setAttachments(_call);
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267 java.lang.Object _resp = _call.invoke(new java.lang.Object[] {job_id});
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269 if (_resp instanceof java.rmi.RemoteException) {
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270 throw (java.rmi.RemoteException)_resp;
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273 extractAttachments(_call);
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275 return (vamsas.objects.simple.SeqSearchResult) _resp;
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276 } catch (java.lang.Exception _exception) {
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277 return (vamsas.objects.simple.SeqSearchResult) org.apache.axis.utils.JavaUtils.convert(_resp, vamsas.objects.simple.SeqSearchResult.class);
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282 public vamsas.objects.simple.WsJobId psearch(vamsas.objects.simple.Alignment al, java.lang.String database) throws java.rmi.RemoteException {
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283 if (super.cachedEndpoint == null) {
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284 throw new org.apache.axis.NoEndPointException();
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286 org.apache.axis.client.Call _call = createCall();
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287 _call.setOperation(_operations[2]);
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288 _call.setUseSOAPAction(true);
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289 _call.setSOAPActionURI("");
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290 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
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291 _call.setOperationName(new javax.xml.namespace.QName("vamsas", "psearch"));
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293 setRequestHeaders(_call);
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294 setAttachments(_call);
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295 java.lang.Object _resp = _call.invoke(new java.lang.Object[] {al, database});
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297 if (_resp instanceof java.rmi.RemoteException) {
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298 throw (java.rmi.RemoteException)_resp;
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301 extractAttachments(_call);
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303 return (vamsas.objects.simple.WsJobId) _resp;
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304 } catch (java.lang.Exception _exception) {
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305 return (vamsas.objects.simple.WsJobId) org.apache.axis.utils.JavaUtils.convert(_resp, vamsas.objects.simple.WsJobId.class);
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310 public vamsas.objects.simple.WsJobId search(vamsas.objects.simple.Sequence s, java.lang.String database) throws java.rmi.RemoteException {
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311 if (super.cachedEndpoint == null) {
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312 throw new org.apache.axis.NoEndPointException();
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314 org.apache.axis.client.Call _call = createCall();
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315 _call.setOperation(_operations[3]);
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316 _call.setUseSOAPAction(true);
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317 _call.setSOAPActionURI("");
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318 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
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319 _call.setOperationName(new javax.xml.namespace.QName("vamsas", "search"));
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321 setRequestHeaders(_call);
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322 setAttachments(_call);
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323 java.lang.Object _resp = _call.invoke(new java.lang.Object[] {s, database});
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325 if (_resp instanceof java.rmi.RemoteException) {
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326 throw (java.rmi.RemoteException)_resp;
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329 extractAttachments(_call);
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331 return (vamsas.objects.simple.WsJobId) _resp;
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332 } catch (java.lang.Exception _exception) {
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333 return (vamsas.objects.simple.WsJobId) org.apache.axis.utils.JavaUtils.convert(_resp, vamsas.objects.simple.WsJobId.class);
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338 public vamsas.objects.simple.WsJobId cancel(java.lang.String jobId) throws java.rmi.RemoteException {
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339 if (super.cachedEndpoint == null) {
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340 throw new org.apache.axis.NoEndPointException();
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342 org.apache.axis.client.Call _call = createCall();
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343 _call.setOperation(_operations[4]);
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344 _call.setUseSOAPAction(true);
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345 _call.setSOAPActionURI("");
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346 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
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347 _call.setOperationName(new javax.xml.namespace.QName("vamsas", "cancel"));
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349 setRequestHeaders(_call);
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350 setAttachments(_call);
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351 java.lang.Object _resp = _call.invoke(new java.lang.Object[] {jobId});
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353 if (_resp instanceof java.rmi.RemoteException) {
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354 throw (java.rmi.RemoteException)_resp;
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357 extractAttachments(_call);
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359 return (vamsas.objects.simple.WsJobId) _resp;
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360 } catch (java.lang.Exception _exception) {
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361 return (vamsas.objects.simple.WsJobId) org.apache.axis.utils.JavaUtils.convert(_resp, vamsas.objects.simple.WsJobId.class);
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