2 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1)
3 * Copyright (C) 2014 The Jalview Authors
5 * This file is part of Jalview.
7 * Jalview is free software: you can redistribute it and/or
8 * modify it under the terms of the GNU General Public License
9 * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
11 * Jalview is distributed in the hope that it will be useful, but
12 * WITHOUT ANY WARRANTY; without even the implied warranty
13 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
14 * PURPOSE. See the GNU General Public License for more details.
16 * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
17 * The Jalview Authors are detailed in the 'AUTHORS' file.
21 public class SeqSearchServiceSoapBindingStub extends
22 org.apache.axis.client.Stub implements ext.vamsas.SeqSearchI
24 private java.util.Vector cachedSerClasses = new java.util.Vector();
26 private java.util.Vector cachedSerQNames = new java.util.Vector();
28 private java.util.Vector cachedSerFactories = new java.util.Vector();
30 private java.util.Vector cachedDeserFactories = new java.util.Vector();
32 static org.apache.axis.description.OperationDesc[] _operations;
36 _operations = new org.apache.axis.description.OperationDesc[5];
37 _initOperationDesc1();
40 private static void _initOperationDesc1()
42 org.apache.axis.description.OperationDesc oper;
43 oper = new org.apache.axis.description.OperationDesc();
44 oper.setName("getDatabase");
45 oper.setReturnType(new javax.xml.namespace.QName(
46 "http://www.w3.org/2001/XMLSchema", "string"));
47 oper.setReturnClass(java.lang.String.class);
48 oper.setReturnQName(new javax.xml.namespace.QName("",
49 "getDatabaseReturn"));
50 oper.setStyle(org.apache.axis.constants.Style.RPC);
51 oper.setUse(org.apache.axis.constants.Use.ENCODED);
52 _operations[0] = oper;
54 oper = new org.apache.axis.description.OperationDesc();
55 oper.setName("getResult");
56 oper.addParameter(new javax.xml.namespace.QName("", "job_id"),
57 new javax.xml.namespace.QName(
58 "http://www.w3.org/2001/XMLSchema", "string"),
59 java.lang.String.class,
60 org.apache.axis.description.ParameterDesc.IN, false, false);
61 oper.setReturnType(new javax.xml.namespace.QName(
62 "simple.objects.vamsas", "SeqSearchResult"));
63 oper.setReturnClass(vamsas.objects.simple.SeqSearchResult.class);
64 oper.setReturnQName(new javax.xml.namespace.QName("", "getResultReturn"));
65 oper.setStyle(org.apache.axis.constants.Style.RPC);
66 oper.setUse(org.apache.axis.constants.Use.ENCODED);
67 _operations[1] = oper;
69 oper = new org.apache.axis.description.OperationDesc();
70 oper.setName("psearch");
71 oper.addParameter(new javax.xml.namespace.QName("", "al"),
72 new javax.xml.namespace.QName("simple.objects.vamsas",
73 "Alignment"), vamsas.objects.simple.Alignment.class,
74 org.apache.axis.description.ParameterDesc.IN, false, false);
75 oper.addParameter(new javax.xml.namespace.QName("", "database"),
76 new javax.xml.namespace.QName(
77 "http://www.w3.org/2001/XMLSchema", "string"),
78 java.lang.String.class,
79 org.apache.axis.description.ParameterDesc.IN, false, false);
80 oper.setReturnType(new javax.xml.namespace.QName(
81 "simple.objects.vamsas", "WsJobId"));
82 oper.setReturnClass(vamsas.objects.simple.WsJobId.class);
83 oper.setReturnQName(new javax.xml.namespace.QName("", "psearchReturn"));
84 oper.setStyle(org.apache.axis.constants.Style.RPC);
85 oper.setUse(org.apache.axis.constants.Use.ENCODED);
86 _operations[2] = oper;
88 oper = new org.apache.axis.description.OperationDesc();
89 oper.setName("search");
90 oper.addParameter(new javax.xml.namespace.QName("", "s"),
91 new javax.xml.namespace.QName("simple.objects.vamsas",
92 "Sequence"), vamsas.objects.simple.Sequence.class,
93 org.apache.axis.description.ParameterDesc.IN, false, false);
94 oper.addParameter(new javax.xml.namespace.QName("", "database"),
95 new javax.xml.namespace.QName(
96 "http://www.w3.org/2001/XMLSchema", "string"),
97 java.lang.String.class,
98 org.apache.axis.description.ParameterDesc.IN, false, false);
99 oper.setReturnType(new javax.xml.namespace.QName(
100 "simple.objects.vamsas", "WsJobId"));
101 oper.setReturnClass(vamsas.objects.simple.WsJobId.class);
102 oper.setReturnQName(new javax.xml.namespace.QName("", "searchReturn"));
103 oper.setStyle(org.apache.axis.constants.Style.RPC);
104 oper.setUse(org.apache.axis.constants.Use.ENCODED);
105 _operations[3] = oper;
107 oper = new org.apache.axis.description.OperationDesc();
108 oper.setName("cancel");
109 oper.addParameter(new javax.xml.namespace.QName("", "jobId"),
110 new javax.xml.namespace.QName(
111 "http://www.w3.org/2001/XMLSchema", "string"),
112 java.lang.String.class,
113 org.apache.axis.description.ParameterDesc.IN, false, false);
114 oper.setReturnType(new javax.xml.namespace.QName(
115 "simple.objects.vamsas", "WsJobId"));
116 oper.setReturnClass(vamsas.objects.simple.WsJobId.class);
117 oper.setReturnQName(new javax.xml.namespace.QName("", "cancelReturn"));
118 oper.setStyle(org.apache.axis.constants.Style.RPC);
119 oper.setUse(org.apache.axis.constants.Use.ENCODED);
120 _operations[4] = oper;
124 public SeqSearchServiceSoapBindingStub() throws org.apache.axis.AxisFault
129 public SeqSearchServiceSoapBindingStub(java.net.URL endpointURL,
130 javax.xml.rpc.Service service) throws org.apache.axis.AxisFault
133 super.cachedEndpoint = endpointURL;
136 public SeqSearchServiceSoapBindingStub(javax.xml.rpc.Service service)
137 throws org.apache.axis.AxisFault
141 super.service = new org.apache.axis.client.Service();
145 super.service = service;
148 javax.xml.namespace.QName qName;
149 java.lang.Class beansf = org.apache.axis.encoding.ser.BeanSerializerFactory.class;
150 java.lang.Class beandf = org.apache.axis.encoding.ser.BeanDeserializerFactory.class;
151 java.lang.Class enumsf = org.apache.axis.encoding.ser.EnumSerializerFactory.class;
152 java.lang.Class enumdf = org.apache.axis.encoding.ser.EnumDeserializerFactory.class;
153 java.lang.Class arraysf = org.apache.axis.encoding.ser.ArraySerializerFactory.class;
154 java.lang.Class arraydf = org.apache.axis.encoding.ser.ArrayDeserializerFactory.class;
155 java.lang.Class simplesf = org.apache.axis.encoding.ser.SimpleSerializerFactory.class;
156 java.lang.Class simpledf = org.apache.axis.encoding.ser.SimpleDeserializerFactory.class;
157 java.lang.Class simplelistsf = org.apache.axis.encoding.ser.SimpleListSerializerFactory.class;
158 java.lang.Class simplelistdf = org.apache.axis.encoding.ser.SimpleListDeserializerFactory.class;
159 qName = new javax.xml.namespace.QName("simple.objects.vamsas", "Result");
160 cachedSerQNames.add(qName);
161 cls = vamsas.objects.simple.Result.class;
162 cachedSerClasses.add(cls);
163 cachedSerFactories.add(beansf);
164 cachedDeserFactories.add(beandf);
166 qName = new javax.xml.namespace.QName("simple.objects.vamsas",
168 cachedSerQNames.add(qName);
169 cls = vamsas.objects.simple.WsJobId.class;
170 cachedSerClasses.add(cls);
171 cachedSerFactories.add(beansf);
172 cachedDeserFactories.add(beandf);
174 qName = new javax.xml.namespace.QName("http://simple.objects.vamsas",
176 cachedSerQNames.add(qName);
177 cls = vamsas.objects.simple.Object.class;
178 cachedSerClasses.add(cls);
179 cachedSerFactories.add(beansf);
180 cachedDeserFactories.add(beandf);
182 qName = new javax.xml.namespace.QName("vamsas", "ArrayOf_xsd_string");
183 cachedSerQNames.add(qName);
184 cls = java.lang.String[].class;
185 cachedSerClasses.add(cls);
186 cachedSerFactories.add(arraysf);
187 cachedDeserFactories.add(arraydf);
189 qName = new javax.xml.namespace.QName("simple.objects.vamsas",
191 cachedSerQNames.add(qName);
192 cls = vamsas.objects.simple.Alignment.class;
193 cachedSerClasses.add(cls);
194 cachedSerFactories.add(beansf);
195 cachedDeserFactories.add(beandf);
197 qName = new javax.xml.namespace.QName("simple.objects.vamsas",
199 cachedSerQNames.add(qName);
200 cls = vamsas.objects.simple.Sequence.class;
201 cachedSerClasses.add(cls);
202 cachedSerFactories.add(beansf);
203 cachedDeserFactories.add(beandf);
205 qName = new javax.xml.namespace.QName("vamsas", "ArrayOf_tns1_Sequence");
206 cachedSerQNames.add(qName);
207 cls = vamsas.objects.simple.Sequence[].class;
208 cachedSerClasses.add(cls);
209 cachedSerFactories.add(arraysf);
210 cachedDeserFactories.add(arraydf);
212 qName = new javax.xml.namespace.QName("simple.objects.vamsas",
214 cachedSerQNames.add(qName);
215 cls = vamsas.objects.simple.SeqSearchResult.class;
216 cachedSerClasses.add(cls);
217 cachedSerFactories.add(beansf);
218 cachedDeserFactories.add(beandf);
220 qName = new javax.xml.namespace.QName("simple.objects.vamsas",
222 cachedSerQNames.add(qName);
223 cls = vamsas.objects.simple.SequenceSet.class;
224 cachedSerClasses.add(cls);
225 cachedSerFactories.add(beansf);
226 cachedDeserFactories.add(beandf);
230 protected org.apache.axis.client.Call createCall()
231 throws java.rmi.RemoteException
235 org.apache.axis.client.Call _call = (org.apache.axis.client.Call) super.service
237 if (super.maintainSessionSet)
239 _call.setMaintainSession(super.maintainSession);
241 if (super.cachedUsername != null)
243 _call.setUsername(super.cachedUsername);
245 if (super.cachedPassword != null)
247 _call.setPassword(super.cachedPassword);
249 if (super.cachedEndpoint != null)
251 _call.setTargetEndpointAddress(super.cachedEndpoint);
253 if (super.cachedTimeout != null)
255 _call.setTimeout(super.cachedTimeout);
257 if (super.cachedPortName != null)
259 _call.setPortName(super.cachedPortName);
261 java.util.Enumeration keys = super.cachedProperties.keys();
262 while (keys.hasMoreElements())
264 java.lang.String key = (java.lang.String) keys.nextElement();
265 _call.setProperty(key, super.cachedProperties.get(key));
267 // All the type mapping information is registered
268 // when the first call is made.
269 // The type mapping information is actually registered in
270 // the TypeMappingRegistry of the service, which
271 // is the reason why registration is only needed for the first call.
276 // must set encoding style before registering serializers
277 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
278 _call.setEncodingStyle(org.apache.axis.Constants.URI_SOAP11_ENC);
279 for (int i = 0; i < cachedSerFactories.size(); ++i)
281 java.lang.Class cls = (java.lang.Class) cachedSerClasses.get(i);
282 javax.xml.namespace.QName qName = (javax.xml.namespace.QName) cachedSerQNames
284 java.lang.Class sf = (java.lang.Class) cachedSerFactories
286 java.lang.Class df = (java.lang.Class) cachedDeserFactories
288 _call.registerTypeMapping(cls, qName, sf, df, false);
293 } catch (java.lang.Throwable _t)
295 throw new org.apache.axis.AxisFault(
296 "Failure trying to get the Call object", _t);
300 public java.lang.String getDatabase() throws java.rmi.RemoteException
302 if (super.cachedEndpoint == null)
304 throw new org.apache.axis.NoEndPointException();
306 org.apache.axis.client.Call _call = createCall();
307 _call.setOperation(_operations[0]);
308 _call.setUseSOAPAction(true);
309 _call.setSOAPActionURI("");
310 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
311 _call.setOperationName(new javax.xml.namespace.QName("vamsas",
314 setRequestHeaders(_call);
315 setAttachments(_call);
316 java.lang.Object _resp = _call.invoke(new java.lang.Object[]
319 if (_resp instanceof java.rmi.RemoteException)
321 throw (java.rmi.RemoteException) _resp;
325 extractAttachments(_call);
328 return (java.lang.String) _resp;
329 } catch (java.lang.Exception _exception)
331 return (java.lang.String) org.apache.axis.utils.JavaUtils.convert(
332 _resp, java.lang.String.class);
337 public vamsas.objects.simple.SeqSearchResult getResult(
338 java.lang.String job_id) throws java.rmi.RemoteException
340 if (super.cachedEndpoint == null)
342 throw new org.apache.axis.NoEndPointException();
344 org.apache.axis.client.Call _call = createCall();
345 _call.setOperation(_operations[1]);
346 _call.setUseSOAPAction(true);
347 _call.setSOAPActionURI("");
348 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
349 _call.setOperationName(new javax.xml.namespace.QName("vamsas",
352 setRequestHeaders(_call);
353 setAttachments(_call);
354 java.lang.Object _resp = _call.invoke(new java.lang.Object[]
357 if (_resp instanceof java.rmi.RemoteException)
359 throw (java.rmi.RemoteException) _resp;
363 extractAttachments(_call);
366 return (vamsas.objects.simple.SeqSearchResult) _resp;
367 } catch (java.lang.Exception _exception)
369 return (vamsas.objects.simple.SeqSearchResult) org.apache.axis.utils.JavaUtils
370 .convert(_resp, vamsas.objects.simple.SeqSearchResult.class);
375 public vamsas.objects.simple.WsJobId psearch(
376 vamsas.objects.simple.Alignment al, java.lang.String database)
377 throws java.rmi.RemoteException
379 if (super.cachedEndpoint == null)
381 throw new org.apache.axis.NoEndPointException();
383 org.apache.axis.client.Call _call = createCall();
384 _call.setOperation(_operations[2]);
385 _call.setUseSOAPAction(true);
386 _call.setSOAPActionURI("");
387 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
388 _call.setOperationName(new javax.xml.namespace.QName("vamsas",
391 setRequestHeaders(_call);
392 setAttachments(_call);
393 java.lang.Object _resp = _call.invoke(new java.lang.Object[]
396 if (_resp instanceof java.rmi.RemoteException)
398 throw (java.rmi.RemoteException) _resp;
402 extractAttachments(_call);
405 return (vamsas.objects.simple.WsJobId) _resp;
406 } catch (java.lang.Exception _exception)
408 return (vamsas.objects.simple.WsJobId) org.apache.axis.utils.JavaUtils
409 .convert(_resp, vamsas.objects.simple.WsJobId.class);
414 public vamsas.objects.simple.WsJobId search(
415 vamsas.objects.simple.Sequence s, java.lang.String database)
416 throws java.rmi.RemoteException
418 if (super.cachedEndpoint == null)
420 throw new org.apache.axis.NoEndPointException();
422 org.apache.axis.client.Call _call = createCall();
423 _call.setOperation(_operations[3]);
424 _call.setUseSOAPAction(true);
425 _call.setSOAPActionURI("");
426 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
427 _call.setOperationName(new javax.xml.namespace.QName("vamsas", "search"));
429 setRequestHeaders(_call);
430 setAttachments(_call);
431 java.lang.Object _resp = _call.invoke(new java.lang.Object[]
434 if (_resp instanceof java.rmi.RemoteException)
436 throw (java.rmi.RemoteException) _resp;
440 extractAttachments(_call);
443 return (vamsas.objects.simple.WsJobId) _resp;
444 } catch (java.lang.Exception _exception)
446 return (vamsas.objects.simple.WsJobId) org.apache.axis.utils.JavaUtils
447 .convert(_resp, vamsas.objects.simple.WsJobId.class);
452 public vamsas.objects.simple.WsJobId cancel(java.lang.String jobId)
453 throws java.rmi.RemoteException
455 if (super.cachedEndpoint == null)
457 throw new org.apache.axis.NoEndPointException();
459 org.apache.axis.client.Call _call = createCall();
460 _call.setOperation(_operations[4]);
461 _call.setUseSOAPAction(true);
462 _call.setSOAPActionURI("");
463 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
464 _call.setOperationName(new javax.xml.namespace.QName("vamsas", "cancel"));
466 setRequestHeaders(_call);
467 setAttachments(_call);
468 java.lang.Object _resp = _call.invoke(new java.lang.Object[]
471 if (_resp instanceof java.rmi.RemoteException)
473 throw (java.rmi.RemoteException) _resp;
477 extractAttachments(_call);
480 return (vamsas.objects.simple.WsJobId) _resp;
481 } catch (java.lang.Exception _exception)
483 return (vamsas.objects.simple.WsJobId) org.apache.axis.utils.JavaUtils
484 .convert(_resp, vamsas.objects.simple.WsJobId.class);