1 package jalview.analysis;
3 import jalview.ext.android.SparseIntArray;
8 * array of keys (chars) and values (counts)
10 public final SparseIntArray profile;
13 * the number of sequences in the profile
18 * the number of non-gapped sequences in the profile
20 public final int nonGapped;
22 public Profile(SparseIntArray counts, int height, int nongappedCount)
24 this.profile = counts;
26 this.nonGapped = nongappedCount;
29 public SparseIntArray getProfile()