src/jalview/analysis/TreeAlgorithm.java

   1 package jalview.analysis;
   2
   3 public enum TreeAlgorithm
   4 {
   5   NEIGHBOUR_JOINING("NJ", "Neighbour Joining"),
   6   AVERAGE_DISTANCE("AV", "Average Distance (UPGMA)"),
   7   MAXIMUM_PARSIMONY("MP", ("Maximum Parsimony")),
   8   MAXIMUM_LIKELIHOOD("ML", "Maximum Likelihood"),
   9   BAYESIAN("BY", "Bayesian Inference");
  10
  11   private final String abbreviation;
  12
  13   private final String name;
  14
  15   TreeAlgorithm(String abbreviatedName, String fullName)
  16   {
  17     this.abbreviation = abbreviatedName;
  18     this.name = fullName;
  19   }
  20
  21   public String getAbbreviation()
  22   {
  23     return abbreviation;
  24   }
  25
  26   public String getName()
  27   {
  28     return name;
  29   }
  30
  31 }