2 * Jalview - A Sequence Alignment Editor and Viewer
\r
3 * Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
\r
5 * This program is free software; you can redistribute it and/or
\r
6 * modify it under the terms of the GNU General Public License
\r
7 * as published by the Free Software Foundation; either version 2
\r
8 * of the License, or (at your option) any later version.
\r
10 * This program is distributed in the hope that it will be useful,
\r
11 * but WITHOUT ANY WARRANTY; without even the implied warranty of
\r
12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
\r
13 * GNU General Public License for more details.
\r
15 * You should have received a copy of the GNU General Public License
\r
16 * along with this program; if not, write to the Free Software
\r
17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
\r
20 package jalview.appletgui;
\r
25 import java.awt.event.*;
\r
27 import jalview.datamodel.*;
\r
28 import jalview.schemes.*;
\r
30 public class UserDefinedColours
\r
35 SequenceGroup seqGroup;
\r
36 Button selectedButton;
\r
37 Vector oldColours = new Vector();
\r
38 ColourSchemeI oldColourScheme;
\r
40 MCview.AppletPDBCanvas pdbcanvas;
\r
42 int R = 0, G = 0, B = 0;
\r
44 public ColourSchemeI loadDefaultColours()
\r
46 // NOT IMPLEMENTED YET IN APPLET VERSION
\r
50 public UserDefinedColours(AlignmentPanel ap, SequenceGroup sg)
\r
55 if (seqGroup != null)
\r
57 oldColourScheme = seqGroup.cs;
\r
61 oldColourScheme = ap.av.getGlobalColourScheme();
\r
67 public UserDefinedColours(MCview.AppletPDBCanvas pdb)
\r
69 this.pdbcanvas = pdb;
\r
81 e.printStackTrace();
\r
83 frame = new Frame();
\r
85 jalview.bin.JalviewLite.addFrame(frame, "User defined colours", 420, 345);
\r
87 if (seqGroup != null)
\r
89 frame.setTitle(frame.getTitle() + " (" + seqGroup.getName() + ")");
\r
92 for (int i = 0; i < 20; i++)
\r
94 makeButton(ResidueProperties.aa2Triplet.get(ResidueProperties.aa[i]) +
\r
95 "", ResidueProperties.aa[i]);
\r
98 makeButton("B", "B");
\r
99 makeButton("Z", "Z");
\r
100 makeButton("X", "X");
\r
101 makeButton("Gap", "'.','-',' '");
\r
105 protected void rText_actionPerformed(ActionEvent e)
\r
109 int i = Integer.parseInt(rText.getText());
\r
110 rScroller.setValue(i);
\r
111 rScroller_adjustmentValueChanged(null);
\r
113 catch (NumberFormatException ex)
\r
117 protected void gText_actionPerformed(ActionEvent e)
\r
121 int i = Integer.parseInt(gText.getText());
\r
122 gScroller.setValue(i);
\r
123 gScroller_adjustmentValueChanged(null);
\r
125 catch (NumberFormatException ex)
\r
130 protected void bText_actionPerformed(ActionEvent e)
\r
134 int i = Integer.parseInt(bText.getText());
\r
135 bScroller.setValue(i);
\r
136 bScroller_adjustmentValueChanged(null);
\r
138 catch (NumberFormatException ex)
\r
143 protected void rScroller_adjustmentValueChanged(AdjustmentEvent e)
\r
145 R = rScroller.getValue();
\r
146 rText.setText(R + "");
\r
150 protected void gScroller_adjustmentValueChanged(AdjustmentEvent e)
\r
152 G = gScroller.getValue();
\r
153 gText.setText(G + "");
\r
157 protected void bScroller_adjustmentValueChanged(AdjustmentEvent e)
\r
159 B = bScroller.getValue();
\r
160 bText.setText(B + "");
\r
164 public void colourChanged()
\r
166 Color col = new Color(R, G, B);
\r
167 target.setBackground(col);
\r
170 if (selectedButton != null)
\r
172 selectedButton.setBackground(col);
\r
173 selectedButton.repaint();
\r
177 public void colourButtonPressed(MouseEvent e)
\r
179 selectedButton = (Button) e.getSource();
\r
180 Color col = selectedButton.getBackground();
\r
182 G = col.getGreen();
\r
184 rScroller.setValue(R);
\r
185 gScroller.setValue(G);
\r
186 bScroller.setValue(B);
\r
187 rText.setText(R + "");
\r
188 gText.setText(G + "");
\r
189 bText.setText(B + "");
\r
194 void makeButton(String label, String aa)
\r
196 final Button button = new Button();
\r
197 Color col = Color.white;
\r
201 col = oldColourScheme.findColour(aa, -1);
\r
203 catch (Exception ex)
\r
206 button.setBackground(col);
\r
207 oldColours.addElement(col);
\r
208 button.setLabel(label);
\r
209 button.setForeground(col.darker().darker().darker());
\r
210 button.setFont(new java.awt.Font("Verdana", 1, 10));
\r
211 button.addMouseListener(new java.awt.event.MouseAdapter()
\r
213 public void mousePressed(MouseEvent e)
\r
215 colourButtonPressed(e);
\r
219 buttonPanel.add(button, null);
\r
222 protected void okButton_actionPerformed(ActionEvent e)
\r
224 applyButton_actionPerformed(null);
\r
225 frame.setVisible(false);
\r
228 protected void applyButton_actionPerformed(ActionEvent e)
\r
230 Color[] newColours = new Color[24];
\r
231 for (int i = 0; i < 24; i++)
\r
233 Button button = (Button) buttonPanel.getComponent(i);
\r
234 newColours[i] = button.getBackground();
\r
237 UserColourScheme ucs = new UserColourScheme(newColours);
\r
239 ucs.setThreshold(0, ap.av.getIgnoreGapsConsensus());
\r
243 if (seqGroup != null)
\r
249 ap.av.setGlobalColourScheme(ucs);
\r
251 ap.seqPanel.seqCanvas.img = null;
\r
254 else if(pdbcanvas!=null)
\r
256 pdbcanvas.pdb.setColours(ucs);
\r
257 pdbcanvas.updateSeqColours();
\r
262 protected void cancelButton_actionPerformed(ActionEvent e)
\r
265 Color[] newColours = new Color[24];
\r
266 for (int i = 0; i < 24; i++)
\r
268 newColours[i] = (Color) oldColours.elementAt(i);
\r
269 buttonPanel.getComponent(i).setBackground(newColours[i]);
\r
272 UserColourScheme ucs = new UserColourScheme(newColours);
\r
276 if (seqGroup != null)
\r
282 ap.av.setGlobalColourScheme(ucs);
\r
286 else if(pdbcanvas!=null)
\r
288 pdbcanvas.pdb.setColours(ucs);
\r
291 frame.setVisible(false);
\r
295 protected Panel buttonPanel = new Panel();
\r
296 protected GridLayout gridLayout = new GridLayout();
\r
297 Panel jPanel2 = new Panel();
\r
298 protected Button okButton = new Button();
\r
299 protected Button applyButton = new Button();
\r
300 protected Button cancelButton = new Button();
\r
301 protected Scrollbar rScroller = new Scrollbar();
\r
302 Label label1 = new Label();
\r
303 protected TextField rText = new TextField();
\r
304 Label label4 = new Label();
\r
305 protected Scrollbar gScroller = new Scrollbar();
\r
306 protected TextField gText = new TextField();
\r
307 Label label5 = new Label();
\r
308 protected Scrollbar bScroller = new Scrollbar();
\r
309 protected TextField bText = new TextField();
\r
310 protected Panel target = new Panel();
\r
312 private void jbInit() throws Exception {
\r
313 this.setLayout(null);
\r
314 buttonPanel.setLayout(gridLayout);
\r
315 gridLayout.setColumns(6);
\r
316 gridLayout.setRows(4);
\r
317 okButton.setFont(new java.awt.Font("Verdana", 0, 11));
\r
318 okButton.setLabel("OK");
\r
319 okButton.addActionListener(new java.awt.event.ActionListener() {
\r
320 public void actionPerformed(ActionEvent e) {
\r
321 okButton_actionPerformed(e);
\r
324 applyButton.setFont(new java.awt.Font("Verdana", 0, 11));
\r
325 applyButton.setLabel("Apply");
\r
326 applyButton.addActionListener(new java.awt.event.ActionListener() {
\r
327 public void actionPerformed(ActionEvent e) {
\r
328 applyButton_actionPerformed(e);
\r
331 cancelButton.setFont(new java.awt.Font("Verdana", 0, 11));
\r
332 cancelButton.setLabel("Cancel");
\r
333 cancelButton.addActionListener(new java.awt.event.ActionListener() {
\r
334 public void actionPerformed(ActionEvent e) {
\r
335 cancelButton_actionPerformed(e);
\r
338 this.setBackground(new Color(212, 208, 223));
\r
339 jPanel2.setBounds(new Rectangle(0, 265, 400, 35));
\r
340 buttonPanel.setBounds(new Rectangle(0, 123, 400, 142));
\r
341 rScroller.setMaximum(256);
\r
342 rScroller.setMinimum(0);
\r
343 rScroller.setOrientation(0);
\r
344 rScroller.setUnitIncrement(1);
\r
345 rScroller.setVisibleAmount(1);
\r
346 rScroller.setBounds(new Rectangle(36, 27, 119, 19));
\r
347 rScroller.addAdjustmentListener(new java.awt.event.AdjustmentListener() {
\r
348 public void adjustmentValueChanged(AdjustmentEvent e) {
\r
349 rScroller_adjustmentValueChanged(e);
\r
352 label1.setAlignment(Label.RIGHT);
\r
353 label1.setText("R");
\r
354 label1.setBounds(new Rectangle(19, 30, 16, 15));
\r
355 rText.setFont(new java.awt.Font("Dialog", Font.PLAIN, 10));
\r
356 rText.setText("0 ");
\r
357 rText.setBounds(new Rectangle(156, 27, 53, 19));
\r
358 rText.addActionListener(new java.awt.event.ActionListener() {
\r
359 public void actionPerformed(ActionEvent e) {
\r
360 rText_actionPerformed(e);
\r
363 label4.setAlignment(Label.RIGHT);
\r
364 label4.setText("G");
\r
365 label4.setBounds(new Rectangle(15, 56, 20, 15));
\r
366 gScroller.setMaximum(256);
\r
367 gScroller.setMinimum(0);
\r
368 gScroller.setOrientation(0);
\r
369 gScroller.setUnitIncrement(1);
\r
370 gScroller.setVisibleAmount(1);
\r
371 gScroller.setBounds(new Rectangle(35, 52, 120, 20));
\r
372 gScroller.addAdjustmentListener(new java.awt.event.AdjustmentListener() {
\r
373 public void adjustmentValueChanged(AdjustmentEvent e) {
\r
374 gScroller_adjustmentValueChanged(e);
\r
377 gText.setFont(new java.awt.Font("Dialog", Font.PLAIN, 10));
\r
378 gText.setText("0 ");
\r
379 gText.setBounds(new Rectangle(156, 52, 53, 20));
\r
380 gText.addActionListener(new java.awt.event.ActionListener() {
\r
381 public void actionPerformed(ActionEvent e) {
\r
382 gText_actionPerformed(e);
\r
385 label5.setAlignment(Label.RIGHT);
\r
386 label5.setText("B");
\r
387 label5.setBounds(new Rectangle(14, 82, 20, 15));
\r
388 bScroller.setMaximum(256);
\r
389 bScroller.setMinimum(0);
\r
390 bScroller.setOrientation(0);
\r
391 bScroller.setUnitIncrement(1);
\r
392 bScroller.setVisibleAmount(1);
\r
393 bScroller.setBounds(new Rectangle(35, 78, 120, 20));
\r
394 bScroller.addAdjustmentListener(new java.awt.event.AdjustmentListener() {
\r
395 public void adjustmentValueChanged(AdjustmentEvent e) {
\r
396 bScroller_adjustmentValueChanged(e);
\r
399 bText.setFont(new java.awt.Font("Dialog", Font.PLAIN, 10));
\r
400 bText.setText("0 ");
\r
401 bText.setBounds(new Rectangle(157, 78, 52, 20));
\r
402 bText.addActionListener(new java.awt.event.ActionListener() {
\r
403 public void actionPerformed(ActionEvent e) {
\r
404 bText_actionPerformed(e);
\r
407 target.setBackground(Color.black);
\r
408 target.setBounds(new Rectangle(229, 26, 134, 79));
\r
409 this.add(jPanel2, null);
\r
410 jPanel2.add(okButton, null);
\r
411 jPanel2.add(applyButton, null);
\r
412 jPanel2.add(cancelButton, null);
\r
413 this.add(buttonPanel, null);
\r
414 this.add(target, null);
\r
415 this.add(gScroller);
\r
416 this.add(rScroller);
\r
417 this.add(bScroller);
\r