2 * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3 * Copyright (C) $$Year-Rel$$ The Jalview Authors
5 * This file is part of Jalview.
7 * Jalview is free software: you can redistribute it and/or
8 * modify it under the terms of the GNU General Public License
9 * as published by the Free Software Foundation, either version 3
10 * of the License, or (at your option) any later version.
12 * Jalview is distributed in the hope that it will be useful, but
13 * WITHOUT ANY WARRANTY; without even the implied warranty
14 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15 * PURPOSE. See the GNU General Public License for more details.
17 * You should have received a copy of the GNU General Public License
18 * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19 * The Jalview Authors are detailed in the 'AUTHORS' file.
21 package jalview.datamodel.xdb.uniprot;
23 import jalview.datamodel.PDBEntry;
25 import java.util.Vector;
28 * Data model for an entry returned from a Uniprot query
30 * @see uniprot_mapping.xml
32 public class UniprotEntry
35 UniprotSequence sequence;
39 Vector<String> accession;
41 Vector<UniprotFeature> feature;
43 Vector<PDBEntry> dbrefs;
45 UniprotProteinName protName;
47 public void setAccession(Vector<String> items)
52 public void setFeature(Vector<UniprotFeature> items)
57 public Vector<UniprotFeature> getFeature()
62 public Vector<String> getAccession()
67 public void setProtein(UniprotProteinName names)
72 public UniprotProteinName getProtein()
77 public void setName(Vector<String> na)
82 public Vector<String> getName()
87 public UniprotSequence getUniprotSequence()
92 public void setUniprotSequence(UniprotSequence seq)
97 public Vector<PDBEntry> getDbReference()
102 public void setDbReference(Vector<PDBEntry> dbref)