src/jalview/ext/archaeopteryx/ArchaeopteryxFrame.java

   1 package jalview.ext.archaeopteryx;
   2
   3 import jalview.analysis.TreeBuilder;
   4 import jalview.gui.Desktop;
   5
   6 import java.awt.Dimension;
   7
   8 import org.forester.archaeopteryx.Archaeopteryx;
   9 import org.forester.archaeopteryx.MainFrame;
  10 import org.forester.phylogeny.Phylogeny;
  11
  12 public class ArchaeopteryxFrame
  13 {
  14
  15   public static void createInstance(Phylogeny aptxTree)
  16   {
  17     new ArchaeopteryxFrame(aptxTree);
  18
  19   }
  20
  21   public static void createInstance(
  22           TreeBuilder calculatedTree)
  23   {
  24     new ArchaeopteryxFrame(calculatedTree);
  25
  26   }
  27
  28   private ArchaeopteryxFrame(Phylogeny aptxTree)
  29   {
  30     MainFrame aptxApp = Archaeopteryx.createApplication(aptxTree);
  31     start(aptxApp);
  32
  33   }
  34
  35   private ArchaeopteryxFrame(TreeBuilder calculatedTree)
  36   {
  37     ArchaeopteryxTreeBuilder aptxTreeBuilder = new ArchaeopteryxTreeBuilder();
  38     Phylogeny aptxTree = aptxTreeBuilder.buildAptxTree(calculatedTree);
  39     MainFrame aptxApp = Archaeopteryx.createApplication(aptxTree);
  40     start(aptxApp);
  41   }
  42
  43
  44
  45   public void start(MainFrame aptxApp)
  46   {
  47     int width = 400;
  48     int height = 550;
  49     aptxApp.setMinimumSize(new Dimension(width - 30, height - 50)); // doesn't
  50                                                                     // work
  51                                                                     // as it
  52                                                                     // gets
  53                                                                     // overridden
  54                                                                     // during
  55                                                                     // addInternalFrame?
  56
  57     Desktop.addInternalFrame(aptxApp, "Archaeopteryx Tree View", width,
  58             height, true);
  59
  60   }
  61
  62
  63 }