src/jalview/ext/archaeopteryx/ArchaeopteryxTreeBuilder.java

   1 package jalview.ext.archaeopteryx;
   2
   3 import jalview.analysis.TreeBuilder;
   4 import jalview.analysis.TreeModel;
   5 import jalview.datamodel.SequenceI;
   6 import jalview.math.MatrixI;
   7
   8 import org.forester.phylogeny.Phylogeny;
   9
  10 public class ArchaeopteryxTreeBuilder extends Phylogeny // cannot inherit
  11                                                         // TreeBuilder as that
  12                                                         // demands the use of
  13                                                         // SequenceNode (instead
  14                                                         // of PhylogenyNode)
  15 {
  16   protected SequenceI[] sequences;
  17
  18   protected MatrixI distances;
  19
  20   public ArchaeopteryxTreeBuilder(TreeModel treeModel)
  21   {
  22
  23   }
  24
  25   public ArchaeopteryxTreeBuilder(TreeBuilder tree)
  26   {
  27
  28   }
  29
  30 }