2 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
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3 * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
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5 * This file is part of Jalview.
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7 * Jalview is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU General Public License
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9 * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
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11 * Jalview is distributed in the hope that it will be useful, but
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12 * WITHOUT ANY WARRANTY; without even the implied warranty
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13 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
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14 * PURPOSE. See the GNU General Public License for more details.
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16 * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
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18 package jalview.ext.varna;
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20 import java.io.File;
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22 import java.net.URL;
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24 import java.applet.Applet;
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26 import java.awt.event.*;
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28 import javax.swing.JPanel;
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30 import jalview.api.AlignmentViewPanel;
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31 import jalview.api.FeatureRenderer;
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32 import jalview.api.SequenceRenderer;
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33 import jalview.api.SequenceStructureBinding;
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34 import jalview.api.StructureSelectionManagerProvider;
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35 import jalview.datamodel.*;
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36 import jalview.structure.*;
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37 import jalview.io.*;
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39 import org.jmol.api.*;
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40 import org.jmol.adapter.smarter.SmarterJmolAdapter;
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42 import org.jmol.popup.*;
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43 import org.jmol.viewer.JmolConstants;
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44 import org.jmol.viewer.Viewer;
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46 import jalview.schemes.*;
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48 import fr.orsay.lri.varna.applications.*;
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51 public abstract class JalviewVarnaBinding implements StructureListener, SequenceStructureBinding,
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52 ComponentListener, StructureSelectionManagerProvider
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