3 import jalview.jbgui.GUserDefinedColours;
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4 import jalview.datamodel.*;
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6 import javax.swing.*;
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8 import java.awt.event.*;
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9 import javax.swing.event.*;
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10 import jalview.schemes.*;
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15 public class UserDefinedColours extends GUserDefinedColours implements ChangeListener
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19 SequenceGroup seqGroup;
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20 JButton selectedButton;
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21 Vector oldColours = new Vector();
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22 ColourSchemeI oldColourScheme;
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23 JInternalFrame frame;
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26 public UserDefinedColours(AlignmentPanel ap, SequenceGroup sg)
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29 frame = new JInternalFrame();
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30 frame.setContentPane(this);
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31 Desktop.addInternalFrame(frame, "User defined colours", 450,530, false );
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32 if(System.getProperty("os.name").startsWith("Mac"))
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33 frame.setSize(450,560);
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36 frame.setTitle( frame.getTitle()+ " ("+sg.getName()+")");
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38 colorChooser.getSelectionModel().addChangeListener(this);
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44 if (seqGroup != null)
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45 oldColourScheme = seqGroup.cs;
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47 oldColourScheme = ap.av.getGlobalColourScheme();
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49 for (int i = 0; i < 20; i++)
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50 makeButton(ResidueProperties.aa2Triplet.get(ResidueProperties.aa[i]) +
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51 "", ResidueProperties.aa[i]);
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53 makeButton("B", "B");
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54 makeButton("Z", "Z");
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55 makeButton("X", "X");
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56 makeButton("Gap", "'.','-',' '");
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58 if(jalview.bin.Cache.getProperty("USER_DEFINED_COLOUR")!=null)
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60 loadColours(jalview.bin.Cache.getProperty("USER_DEFINED_COLOUR"));
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64 public void stateChanged(ChangeEvent evt)
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66 if(selectedButton!=null)
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67 selectedButton.setBackground( colorChooser.getColor() );
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70 public void colourButtonPressed(MouseEvent e)
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72 selectedButton = (JButton)e.getSource();
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73 colorChooser.setColor(selectedButton.getBackground());
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76 void makeButton(String label, String aa)
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78 final JButton button = new JButton();
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79 Color col = Color.white;
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83 col = oldColourScheme.findColour(aa, -1);
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84 }catch(Exception ex){}
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86 button.setBackground( col );
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87 oldColours.addElement( col );
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88 button.setText( label );
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89 button.setForeground( col.darker().darker().darker() );
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90 button.setFont(new java.awt.Font("Verdana", 1, 10));
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91 button.addMouseListener(new java.awt.event.MouseAdapter()
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93 public void mouseClicked(MouseEvent e)
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95 colourButtonPressed(e);
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99 buttonPanel.add(button, null);
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103 protected void okButton_actionPerformed(ActionEvent e)
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105 applyButton_actionPerformed(null);
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107 frame.setClosed(true);
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108 }catch(Exception ex){}
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111 protected void applyButton_actionPerformed(ActionEvent e)
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113 Color [] newColours = new Color[24];
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114 for(int i=0; i<24; i++)
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116 JButton button = (JButton)buttonPanel.getComponent(i);
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117 newColours[i] = button.getBackground();
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120 UserColourScheme ucs = new UserColourScheme(newColours);
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121 ucs.setThreshold(0);
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129 ap.alignFrame.changeColour(ucs);
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133 protected void loadbutton_actionPerformed(ActionEvent e)
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135 JalviewFileChooser chooser = new JalviewFileChooser(
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136 jalview.bin.Cache.getProperty("LAST_DIRECTORY"),
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137 new String[]{"jc"},
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138 new String[]{"Jalview User Colours"},
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139 "Jalview User Colours");
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140 chooser.setFileView(new jalview.io.JalviewFileView());
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141 chooser.setDialogTitle("Load colour scheme");
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142 chooser.setToolTipText("Load");
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143 int value = chooser.showOpenDialog(this);
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144 if (value == JalviewFileChooser.APPROVE_OPTION)
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146 File choice = chooser.getSelectedFile();
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147 jalview.bin.Cache.setProperty("LAST_DIRECTORY", choice.getParent());
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148 Color[] colors = loadColours(choice.getAbsolutePath());
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149 for (int i = 0; i < colors.length; i++)
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151 JButton button = (JButton) buttonPanel.getComponent(i);
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152 button.setBackground(colors[i]);
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158 public static UserColourScheme loadDefaultColours()
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160 if(jalview.bin.Cache.getProperty("USER_DEFINED_COLOUR")!=null)
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161 return loadDefaultColours(jalview.bin.Cache.getProperty("USER_DEFINED_COLOUR"));
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166 public static UserColourScheme loadDefaultColours(String file)
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168 UserColourScheme ucs = null;
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169 ucs = new UserColourScheme(loadColours(file));
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170 ucs.setThreshold(0);
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174 static Color [] loadColours(String file)
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176 Color [] newColours=null;
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179 InputStreamReader in = new InputStreamReader(
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180 new FileInputStream(file), "UTF-8");
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182 jalview.binding.JalviewUserColours ucs = new jalview.binding.JalviewUserColours();
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183 ucs = (jalview.binding.JalviewUserColours)ucs.unmarshal(in);
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185 newColours = new Color[ucs.getColourCount()];
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186 for (int i = 0; i < 24; i++)
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187 newColours[i] = new Color(Integer.parseInt(ucs.getColour(i).getRGB(), 16));
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190 catch (Exception ex)
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191 {ex.printStackTrace();}
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196 protected void savebutton_actionPerformed(ActionEvent e)
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198 JalviewFileChooser chooser = new JalviewFileChooser(
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199 jalview.bin.Cache.getProperty("LAST_DIRECTORY"),
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200 new String[]{"jc"},
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201 new String[]{"Jalview User Colours"},
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202 "Jalview User Colours");
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204 chooser.setFileView(new jalview.io.JalviewFileView());
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205 chooser.setDialogTitle("Save colour scheme");
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206 chooser.setToolTipText("Save");
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207 int value = chooser.showSaveDialog(this);
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208 if (value == JalviewFileChooser.APPROVE_OPTION)
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210 String choice = chooser.getSelectedFile().getPath();
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211 jalview.bin.Cache.setProperty("USER_DEFINED_COLOUR", choice);
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212 jalview.binding.JalviewUserColours ucs = new jalview.binding.JalviewUserColours();
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215 PrintWriter out = new PrintWriter(new OutputStreamWriter(
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216 new FileOutputStream(choice), "UTF-8"));
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217 for(int i=0; i<24; i++)
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219 JButton button = (JButton)buttonPanel.getComponent(i);
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220 jalview.binding.Colour col = new jalview.binding.Colour();
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221 col.setName(button.getText());
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222 col.setRGB( jalview.util.Format.getHexString( button.getBackground() ));
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223 ucs.addColour(col);
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229 catch(Exception ex)
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230 {ex.printStackTrace();}
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235 protected void cancelButton_actionPerformed(ActionEvent e)
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238 Color [] newColours = new Color[24];
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239 for(int i=0; i<24; i++)
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241 newColours[i] = (Color)oldColours.elementAt(i);
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242 buttonPanel.getComponent(i).setBackground(newColours[i]);
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245 UserColourScheme ucs = new UserColourScheme( newColours );
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247 if (seqGroup != null)
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250 ap.av.setGlobalColourScheme(ucs);
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255 frame.setClosed(true);
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256 }catch(Exception ex){}
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