2 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5)
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3 * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
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5 * This file is part of Jalview.
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7 * Jalview is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU General Public License
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9 * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
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11 * Jalview is distributed in the hope that it will be useful, but
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12 * WITHOUT ANY WARRANTY; without even the implied warranty
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13 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
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14 * PURPOSE. See the GNU General Public License for more details.
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16 * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
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20 import java.io.IOException;
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23 * jalview flatfile for io of sequence ID mapping data
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24 * DATABASE\t<nickname>\t<name>\t<version>... properties?jdbc, url, handler
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26 * <seqID>\tDBID\taccno\t|seqstart,seqend,start,end...|\t|dbstart,dbend,...|
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29 public class DBRefFile extends AlignFile
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32 public void parse() throws IOException
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34 // TODO Auto-generated method stub
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38 public String print()
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40 // TODO Auto-generated method stub
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