src/jalview/jbgui/GAlignmentPanel.java

   1 /*
   2  * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
   3  * Copyright (C) $$Year-Rel$$ The Jalview Authors
   4  *
   5  * This file is part of Jalview.
   6  *
   7  * Jalview is free software: you can redistribute it and/or
   8  * modify it under the terms of the GNU General Public License
   9  * as published by the Free Software Foundation, either version 3
  10  * of the License, or (at your option) any later version.
  11  *
  12  * Jalview is distributed in the hope that it will be useful, but
  13  * WITHOUT ANY WARRANTY; without even the implied warranty
  14  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
  15  * PURPOSE.  See the GNU General Public License for more details.
  16  *
  17  * You should have received a copy of the GNU General Public License
  18  * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  19  * The Jalview Authors are detailed in the 'AUTHORS' file.
  20  */
  21 package jalview.jbgui;
  22
  23 import java.awt.BorderLayout;
  24 import java.awt.Color;
  25 import java.awt.Dimension;
  26
  27 import javax.swing.BorderFactory;
  28 import javax.swing.ButtonGroup;
  29 import javax.swing.JPanel;
  30 import javax.swing.JScrollBar;
  31 import javax.swing.JScrollPane;
  32 import javax.swing.border.Border;
  33
  34 public class GAlignmentPanel extends JPanel
  35 {
  36           protected JScrollBar vscroll = new JScrollBar();
  37
  38           protected JScrollBar hscroll = new JScrollBar();
  39
  40           BorderLayout borderLayout1 = new BorderLayout();
  41
  42           BorderLayout borderLayout3 = new BorderLayout();
  43
  44           BorderLayout borderLayout5 = new BorderLayout();
  45
  46           BorderLayout borderLayout6 = new BorderLayout();
  47
  48           ButtonGroup buttonGroup1 = new ButtonGroup();
  49
  50           BorderLayout borderLayout7 = new BorderLayout();
  51
  52           BorderLayout borderLayout10 = new BorderLayout();
  53
  54           BorderLayout borderLayout11 = new BorderLayout();
  55
  56           public JScrollPane annotationScroller = new JScrollPane();
  57
  58           Border border1;
  59
  60           BorderLayout borderLayout4 = new BorderLayout();
  61
  62
  63           static JPanel newJPanel() {  // BH 2019
  64                   JPanel p = new JPanel();
  65                   // leaving this in, as it prevents
  66                   // the checkerboard business, despite how
  67                   // funky that looks. Remove if you want to.
  68                   p.setBackground(Color.white);
  69                         return p;
  70           }
  71
  72   protected JPanel sequenceHolderPanel = newJPanel();
  73   protected JPanel seqPanelHolder = newJPanel();
  74   protected JPanel scalePanelHolder = newJPanel();
  75   protected JPanel idPanelHolder = newJPanel();
  76   protected JPanel idSpaceFillerPanel1 = newJPanel();
  77   public JPanel annotationSpaceFillerHolder = newJPanel();
  78   protected JPanel hscrollFillerPanel = newJPanel();
  79   JPanel hscrollHolder = newJPanel();
  80
  81
  82
  83   public GAlignmentPanel()
  84   {
  85     try
  86     {
  87       jbInit();
  88     } catch (Exception e)
  89     {
  90       e.printStackTrace();
  91     }
  92   }
  93
  94   private void jbInit() throws Exception
  95   {
  96         //  annotationScroller.setBackground(Color.white);  // BH 2019
  97
  98     border1 = BorderFactory.createLineBorder(Color.gray, 1);
  99     idPanelHolder.setBorder(null);
 100     idPanelHolder.setPreferredSize(new Dimension(70, 10));
 101     this.setLayout(borderLayout7);
 102     sequenceHolderPanel
 103             .setMaximumSize(new Dimension(2147483647, 2147483647));
 104     sequenceHolderPanel.setMinimumSize(new Dimension(150, 150));
 105     sequenceHolderPanel.setPreferredSize(new Dimension(150, 150));
 106     sequenceHolderPanel.setLayout(borderLayout3);
 107     seqPanelHolder.setLayout(borderLayout1);
 108     scalePanelHolder.setBackground(Color.white);
 109     scalePanelHolder.setMinimumSize(new Dimension(10, 80));
 110     scalePanelHolder.setPreferredSize(new Dimension(10, 30));
 111     scalePanelHolder.setLayout(borderLayout6);
 112     idPanelHolder.setLayout(borderLayout5);
 113     idSpaceFillerPanel1.setBackground(Color.white);
 114     idSpaceFillerPanel1.setPreferredSize(new Dimension(10, 30));
 115     idSpaceFillerPanel1.setLayout(borderLayout11);
 116     annotationSpaceFillerHolder.setBackground(Color.white);
 117     annotationSpaceFillerHolder.setPreferredSize(new Dimension(10, 80));
 118     annotationSpaceFillerHolder.setLayout(borderLayout4);
 119     hscroll.setOrientation(JScrollBar.HORIZONTAL);
 120     hscrollHolder.setLayout(borderLayout10);
 121     hscrollFillerPanel.setBackground(Color.white);
 122     hscrollFillerPanel.setPreferredSize(new Dimension(70, 10));
 123     hscrollHolder.setBackground(Color.white);
 124     annotationScroller.setBorder(null);
 125     annotationScroller.setPreferredSize(new Dimension(10, 80));
 126     this.setPreferredSize(new Dimension(220, 166));
 127
 128     sequenceHolderPanel.add(scalePanelHolder, BorderLayout.NORTH);
 129     sequenceHolderPanel.add(seqPanelHolder, BorderLayout.CENTER);
 130     seqPanelHolder.add(vscroll, BorderLayout.EAST);
 131     sequenceHolderPanel.add(annotationScroller, BorderLayout.SOUTH);
 132
 133     // jPanel3.add(secondaryPanelHolder, BorderLayout.SOUTH);
 134     this.add(idPanelHolder, BorderLayout.WEST);
 135     idPanelHolder.add(idSpaceFillerPanel1, BorderLayout.NORTH);
 136     idPanelHolder.add(annotationSpaceFillerHolder, BorderLayout.SOUTH);
 137     this.add(hscrollHolder, BorderLayout.SOUTH);
 138     hscrollHolder.add(hscroll, BorderLayout.CENTER);
 139     hscrollHolder.add(hscrollFillerPanel, BorderLayout.WEST);
 140     this.add(sequenceHolderPanel, BorderLayout.CENTER);
 141   }
 142 }