2 * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3 * Copyright (C) $$Year-Rel$$ The Jalview Authors
5 * This file is part of Jalview.
7 * Jalview is free software: you can redistribute it and/or
8 * modify it under the terms of the GNU General Public License
9 * as published by the Free Software Foundation, either version 3
10 * of the License, or (at your option) any later version.
12 * Jalview is distributed in the hope that it will be useful, but
13 * WITHOUT ANY WARRANTY; without even the implied warranty
14 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15 * PURPOSE. See the GNU General Public License for more details.
17 * You should have received a copy of the GNU General Public License
18 * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19 * The Jalview Authors are detailed in the 'AUTHORS' file.
21 package jalview.jbgui;
23 import java.awt.BorderLayout;
24 import java.awt.Color;
25 import java.awt.Dimension;
27 import javax.swing.BorderFactory;
28 import javax.swing.ButtonGroup;
29 import javax.swing.JPanel;
30 import javax.swing.JScrollBar;
31 import javax.swing.JScrollPane;
32 import javax.swing.border.Border;
34 public class GAlignmentPanel extends JPanel
36 protected JPanel sequenceHolderPanel = new JPanel();
38 protected JScrollBar vscroll = new JScrollBar();
40 protected JScrollBar hscroll = new JScrollBar();
42 protected JPanel seqPanelHolder = new JPanel();
44 BorderLayout borderLayout1 = new BorderLayout();
46 BorderLayout borderLayout3 = new BorderLayout();
48 protected JPanel scalePanelHolder = new JPanel();
50 protected JPanel idPanelHolder = new JPanel();
52 BorderLayout borderLayout5 = new BorderLayout();
54 protected JPanel idSpaceFillerPanel1 = new JPanel();
56 public JPanel annotationSpaceFillerHolder = new JPanel();
58 BorderLayout borderLayout6 = new BorderLayout();
60 ButtonGroup buttonGroup1 = new ButtonGroup();
62 BorderLayout borderLayout7 = new BorderLayout();
64 JPanel hscrollHolder = new JPanel();
66 BorderLayout borderLayout10 = new BorderLayout();
68 protected JPanel hscrollFillerPanel = new JPanel();
70 BorderLayout borderLayout11 = new BorderLayout();
72 public JScrollPane annotationScroller = new JScrollPane();
76 BorderLayout borderLayout4 = new BorderLayout();
78 public GAlignmentPanel()
89 private void jbInit() throws Exception
91 border1 = BorderFactory.createLineBorder(Color.gray, 1);
92 idPanelHolder.setBorder(null);
93 idPanelHolder.setPreferredSize(new Dimension(70, 10));
94 this.setLayout(borderLayout7);
96 .setMaximumSize(new Dimension(2147483647, 2147483647));
97 sequenceHolderPanel.setMinimumSize(new Dimension(150, 150));
98 sequenceHolderPanel.setPreferredSize(new Dimension(150, 150));
99 sequenceHolderPanel.setLayout(borderLayout3);
100 seqPanelHolder.setLayout(borderLayout1);
101 scalePanelHolder.setBackground(Color.white);
102 scalePanelHolder.setMinimumSize(new Dimension(10, 80));
103 scalePanelHolder.setPreferredSize(new Dimension(10, 30));
104 scalePanelHolder.setLayout(borderLayout6);
105 idPanelHolder.setLayout(borderLayout5);
106 idSpaceFillerPanel1.setBackground(Color.white);
107 idSpaceFillerPanel1.setPreferredSize(new Dimension(10, 30));
108 idSpaceFillerPanel1.setLayout(borderLayout11);
109 annotationSpaceFillerHolder.setBackground(Color.white);
110 annotationSpaceFillerHolder.setPreferredSize(new Dimension(10, 80));
111 annotationSpaceFillerHolder.setLayout(borderLayout4);
112 hscroll.setOrientation(JScrollBar.HORIZONTAL);
113 hscrollHolder.setLayout(borderLayout10);
114 hscrollFillerPanel.setBackground(Color.white);
115 hscrollFillerPanel.setPreferredSize(new Dimension(70, 10));
116 hscrollHolder.setBackground(Color.white);
117 annotationScroller.setBorder(null);
118 annotationScroller.setPreferredSize(new Dimension(10, 80));
119 this.setPreferredSize(new Dimension(220, 166));
121 sequenceHolderPanel.add(scalePanelHolder, BorderLayout.NORTH);
122 sequenceHolderPanel.add(seqPanelHolder, BorderLayout.CENTER);
123 seqPanelHolder.add(vscroll, BorderLayout.EAST);
124 sequenceHolderPanel.add(annotationScroller, BorderLayout.SOUTH);
126 // jPanel3.add(secondaryPanelHolder, BorderLayout.SOUTH);
127 this.add(idPanelHolder, BorderLayout.WEST);
128 idPanelHolder.add(idSpaceFillerPanel1, BorderLayout.NORTH);
129 idPanelHolder.add(annotationSpaceFillerHolder, BorderLayout.SOUTH);
130 this.add(hscrollHolder, BorderLayout.SOUTH);
131 hscrollHolder.add(hscroll, BorderLayout.CENTER);
132 hscrollHolder.add(hscrollFillerPanel, BorderLayout.WEST);
133 this.add(sequenceHolderPanel, BorderLayout.CENTER);