2 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4)
3 * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
5 * This program is free software; you can redistribute it and/or
6 * modify it under the terms of the GNU General Public License
7 * as published by the Free Software Foundation; either version 2
8 * of the License, or (at your option) any later version.
10 * This program is distributed in the hope that it will be useful,
11 * but WITHOUT ANY WARRANTY; without even the implied warranty of
12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
13 * GNU General Public License for more details.
15 * You should have received a copy of the GNU General Public License
16 * along with this program; if not, write to the Free Software
17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
19 package jalview.jbgui;
23 import javax.swing.border.*;
25 public class GAlignmentPanel
28 protected JPanel sequenceHolderPanel = new JPanel();
29 protected JScrollBar vscroll = new JScrollBar();
30 protected JScrollBar hscroll = new JScrollBar();
31 protected JPanel seqPanelHolder = new JPanel();
32 BorderLayout borderLayout1 = new BorderLayout();
33 BorderLayout borderLayout3 = new BorderLayout();
34 protected JPanel scalePanelHolder = new JPanel();
35 protected JPanel idPanelHolder = new JPanel();
36 BorderLayout borderLayout5 = new BorderLayout();
37 protected JPanel idSpaceFillerPanel1 = new JPanel();
38 public JPanel annotationSpaceFillerHolder = new JPanel();
39 BorderLayout borderLayout6 = new BorderLayout();
40 ButtonGroup buttonGroup1 = new ButtonGroup();
41 BorderLayout borderLayout7 = new BorderLayout();
42 JPanel hscrollHolder = new JPanel();
43 BorderLayout borderLayout10 = new BorderLayout();
44 protected JPanel hscrollFillerPanel = new JPanel();
45 BorderLayout borderLayout11 = new BorderLayout();
46 public JScrollPane annotationScroller = new JScrollPane();
48 BorderLayout borderLayout4 = new BorderLayout();
50 public GAlignmentPanel()
65 border1 = BorderFactory.createLineBorder(Color.gray, 1);
66 idPanelHolder.setBorder(null);
67 idPanelHolder.setPreferredSize(new Dimension(70, 10));
68 this.setLayout(borderLayout7);
69 sequenceHolderPanel.setMaximumSize(new Dimension(2147483647, 2147483647));
70 sequenceHolderPanel.setMinimumSize(new Dimension(150, 150));
71 sequenceHolderPanel.setPreferredSize(new Dimension(150, 150));
72 sequenceHolderPanel.setLayout(borderLayout3);
73 seqPanelHolder.setLayout(borderLayout1);
74 scalePanelHolder.setBackground(Color.white);
75 scalePanelHolder.setMinimumSize(new Dimension(10, 80));
76 scalePanelHolder.setPreferredSize(new Dimension(10, 30));
77 scalePanelHolder.setLayout(borderLayout6);
78 idPanelHolder.setLayout(borderLayout5);
79 idSpaceFillerPanel1.setBackground(Color.white);
80 idSpaceFillerPanel1.setPreferredSize(new Dimension(10, 30));
81 idSpaceFillerPanel1.setLayout(borderLayout11);
82 annotationSpaceFillerHolder.setBackground(Color.white);
83 annotationSpaceFillerHolder.setPreferredSize(new Dimension(10, 80));
84 annotationSpaceFillerHolder.setLayout(borderLayout4);
85 hscroll.setOrientation(JScrollBar.HORIZONTAL);
86 hscrollHolder.setLayout(borderLayout10);
87 hscrollFillerPanel.setBackground(Color.white);
88 hscrollFillerPanel.setPreferredSize(new Dimension(70, 10));
89 hscrollHolder.setBackground(Color.white);
90 annotationScroller.setBorder(null);
91 annotationScroller.setPreferredSize(new Dimension(10, 80));
92 this.setPreferredSize(new Dimension(220, 166));
94 sequenceHolderPanel.add(scalePanelHolder, BorderLayout.NORTH);
95 sequenceHolderPanel.add(seqPanelHolder, BorderLayout.CENTER);
96 seqPanelHolder.add(vscroll, BorderLayout.EAST);
97 sequenceHolderPanel.add(annotationScroller, BorderLayout.SOUTH);
99 // jPanel3.add(secondaryPanelHolder, BorderLayout.SOUTH);
100 this.add(idPanelHolder, BorderLayout.WEST);
101 idPanelHolder.add(idSpaceFillerPanel1, BorderLayout.NORTH);
102 idPanelHolder.add(annotationSpaceFillerHolder, BorderLayout.SOUTH);
103 this.add(hscrollHolder, BorderLayout.SOUTH);
104 hscrollHolder.add(hscroll, BorderLayout.CENTER);
105 hscrollHolder.add(hscrollFillerPanel, BorderLayout.WEST);
106 this.add(sequenceHolderPanel, BorderLayout.CENTER);