2 * Jalview - A Sequence Alignment Editor and Viewer
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3 * Copyright (C) 2007 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
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5 * This program is free software; you can redistribute it and/or
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6 * modify it under the terms of the GNU General Public License
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7 * as published by the Free Software Foundation; either version 2
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8 * of the License, or (at your option) any later version.
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10 * This program is distributed in the hope that it will be useful,
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11 * but WITHOUT ANY WARRANTY; without even the implied warranty of
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12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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13 * GNU General Public License for more details.
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15 * You should have received a copy of the GNU General Public License
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16 * along with this program; if not, write to the Free Software
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17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
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19 package jalview.jbgui;
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22 import javax.swing.*;
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23 import javax.swing.border.*;
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25 public class GAlignmentPanel
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28 protected JPanel sequenceHolderPanel = new JPanel();
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29 protected JScrollBar vscroll = new JScrollBar();
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30 protected JScrollBar hscroll = new JScrollBar();
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31 protected JPanel seqPanelHolder = new JPanel();
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32 BorderLayout borderLayout1 = new BorderLayout();
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33 BorderLayout borderLayout3 = new BorderLayout();
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34 protected JPanel scalePanelHolder = new JPanel();
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35 protected JPanel idPanelHolder = new JPanel();
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36 BorderLayout borderLayout5 = new BorderLayout();
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37 protected JPanel idSpaceFillerPanel1 = new JPanel();
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38 public JPanel annotationSpaceFillerHolder = new JPanel();
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39 BorderLayout borderLayout6 = new BorderLayout();
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40 ButtonGroup buttonGroup1 = new ButtonGroup();
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41 BorderLayout borderLayout7 = new BorderLayout();
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42 JPanel hscrollHolder = new JPanel();
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43 BorderLayout borderLayout10 = new BorderLayout();
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44 protected JPanel hscrollFillerPanel = new JPanel();
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45 BorderLayout borderLayout11 = new BorderLayout();
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46 public JScrollPane annotationScroller = new JScrollPane();
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48 BorderLayout borderLayout4 = new BorderLayout();
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50 public GAlignmentPanel()
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58 e.printStackTrace();
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62 private void jbInit()
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65 border1 = BorderFactory.createLineBorder(Color.gray, 1);
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66 idPanelHolder.setBorder(null);
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67 idPanelHolder.setPreferredSize(new Dimension(70, 10));
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68 this.setLayout(borderLayout7);
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69 sequenceHolderPanel.setMaximumSize(new Dimension(2147483647, 2147483647));
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70 sequenceHolderPanel.setMinimumSize(new Dimension(150, 150));
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71 sequenceHolderPanel.setPreferredSize(new Dimension(150, 150));
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72 sequenceHolderPanel.setLayout(borderLayout3);
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73 seqPanelHolder.setLayout(borderLayout1);
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74 scalePanelHolder.setBackground(Color.white);
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75 scalePanelHolder.setMinimumSize(new Dimension(10, 80));
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76 scalePanelHolder.setPreferredSize(new Dimension(10, 30));
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77 scalePanelHolder.setLayout(borderLayout6);
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78 idPanelHolder.setLayout(borderLayout5);
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79 idSpaceFillerPanel1.setBackground(Color.white);
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80 idSpaceFillerPanel1.setPreferredSize(new Dimension(10, 30));
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81 idSpaceFillerPanel1.setLayout(borderLayout11);
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82 annotationSpaceFillerHolder.setBackground(Color.white);
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83 annotationSpaceFillerHolder.setPreferredSize(new Dimension(10, 80));
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84 annotationSpaceFillerHolder.setLayout(borderLayout4);
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85 hscroll.setOrientation(JScrollBar.HORIZONTAL);
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86 hscrollHolder.setLayout(borderLayout10);
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87 hscrollFillerPanel.setBackground(Color.white);
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88 hscrollFillerPanel.setPreferredSize(new Dimension(70, 10));
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89 hscrollHolder.setBackground(Color.white);
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90 annotationScroller.setBorder(null);
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91 annotationScroller.setPreferredSize(new Dimension(10, 80));
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92 this.setPreferredSize(new Dimension(220, 166));
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94 sequenceHolderPanel.add(scalePanelHolder, BorderLayout.NORTH);
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95 sequenceHolderPanel.add(seqPanelHolder, BorderLayout.CENTER);
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96 seqPanelHolder.add(vscroll, BorderLayout.EAST);
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97 sequenceHolderPanel.add(annotationScroller, BorderLayout.SOUTH);
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99 // jPanel3.add(secondaryPanelHolder, BorderLayout.SOUTH);
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100 this.add(idPanelHolder, BorderLayout.WEST);
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101 idPanelHolder.add(idSpaceFillerPanel1, BorderLayout.NORTH);
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102 idPanelHolder.add(annotationSpaceFillerHolder, BorderLayout.SOUTH);
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103 this.add(hscrollHolder, BorderLayout.SOUTH);
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104 hscrollHolder.add(hscroll, BorderLayout.CENTER);
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105 hscrollHolder.add(hscrollFillerPanel, BorderLayout.WEST);
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106 this.add(sequenceHolderPanel, BorderLayout.CENTER);
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