src/jalview/jbgui/GPreferences.java

   1 /*\r
   2 * Jalview - A Sequence Alignment Editor and Viewer\r
   3 * Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
   4 *\r
   5 * This program is free software; you can redistribute it and/or\r
   6 * modify it under the terms of the GNU General Public License\r
   7 * as published by the Free Software Foundation; either version 2\r
   8 * of the License, or (at your option) any later version.\r
   9 *\r
  10 * This program is distributed in the hope that it will be useful,\r
  11 * but WITHOUT ANY WARRANTY; without even the implied warranty of\r
  12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the\r
  13 * GNU General Public License for more details.\r
  14 *\r
  15 * You should have received a copy of the GNU General Public License\r
  16 * along with this program; if not, write to the Free Software\r
  17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA\r
  18 */\r
  19 package jalview.jbgui;\r
  20 \r
  21 import java.awt.*;\r
  22 \r
  23 import javax.swing.*;\r
  24 import javax.swing.border.TitledBorder;\r
  25 import java.awt.event.*;\r
  26 import javax.swing.event.*;\r
  27 \r
  28 \r
  29 /**\r
  30  * DOCUMENT ME!\r
  31  *\r
  32  * @author $author$\r
  33  * @version $Revision$\r
  34  */\r
  35 public class GPreferences extends JPanel\r
  36 {\r
  37     JTabbedPane tabbedPane = new JTabbedPane();\r
  38 \r
  39     JButton ok = new JButton();\r
  40     JButton cancel = new JButton();\r
  41     JPanel okCancelPanel = new JPanel();\r
  42     BorderLayout borderLayout1 = new BorderLayout();\r
  43     protected JCheckBox quality = new JCheckBox();\r
  44     JPanel visualTab = new JPanel();\r
  45     protected JCheckBox fullID = new JCheckBox();\r
  46     protected JCheckBox fullScreen = new JCheckBox();\r
  47     protected JCheckBox conservation = new JCheckBox();\r
  48     protected JCheckBox identity = new JCheckBox();\r
  49     protected JCheckBox annotations = new JCheckBox();\r
  50     JLabel gapLabel = new JLabel();\r
  51     protected JComboBox colour = new JComboBox();\r
  52     JLabel colourLabel = new JLabel();\r
  53     JLabel fontLabel = new JLabel();\r
  54     protected JComboBox fontSizeCB = new JComboBox();\r
  55     protected JComboBox fontStyleCB = new JComboBox();\r
  56     protected JComboBox fontNameCB = new JComboBox();\r
  57     protected JComboBox gapSymbolCB = new JComboBox();\r
  58     protected JCheckBox startupCheckbox = new JCheckBox();\r
  59     protected JTextField startupFileTextfield = new JTextField();\r
  60   JPanel connectTab = new JPanel();\r
  61   JLabel serverLabel = new JLabel();\r
  62   protected JList linkURLList = new JList();\r
  63   protected JTextField proxyServerTB = new JTextField();\r
  64   protected JTextField proxyPortTB = new JTextField();\r
  65   JLabel portLabel = new JLabel();\r
  66   JLabel browserLabel = new JLabel();\r
  67   protected JTextField defaultBrowser = new JTextField();\r
  68   JButton newLink = new JButton();\r
  69   JButton editLink = new JButton();\r
  70   JButton deleteLink = new JButton();\r
  71   JScrollPane linkScrollPane = new JScrollPane();\r
  72   JPanel linkPanel = new JPanel();\r
  73   BorderLayout borderLayout2 = new BorderLayout();\r
  74   JPanel editLinkButtons = new JPanel();\r
  75   GridLayout gridLayout1 = new GridLayout();\r
  76   protected JList linkNameList = new JList();\r
  77   JPanel linkPanel2 = new JPanel();\r
  78   BorderLayout borderLayout3 = new BorderLayout();\r
  79   protected JCheckBox useProxy = new JCheckBox();\r
  80   JPanel jPanel1 = new JPanel();\r
  81   TitledBorder titledBorder1 = new TitledBorder("Proxy Server");\r
  82   GridBagLayout gridBagLayout2 = new GridBagLayout();\r
  83   GridBagLayout gridBagLayout1 = new GridBagLayout();\r
  84   GridBagLayout gridBagLayout3 = new GridBagLayout();\r
  85   protected JComboBox sortby = new JComboBox();\r
  86   JLabel sortLabel = new JLabel();\r
  87   /**\r
  88      * Creates a new GPreferences object.\r
  89      */\r
  90     public GPreferences()\r
  91     {\r
  92         try\r
  93         {\r
  94             jbInit();\r
  95         }\r
  96         catch (Exception ex)\r
  97         {\r
  98             ex.printStackTrace();\r
  99         }\r
 100     }\r
 101 \r
 102     /**\r
 103      * DOCUMENT ME!\r
 104      *\r
 105      * @throws Exception DOCUMENT ME!\r
 106      */\r
 107     private void jbInit() throws Exception\r
 108     {\r
 109         this.setLayout(borderLayout1);\r
 110         ok.setText("OK");\r
 111         ok.addActionListener(new ActionListener()\r
 112             {\r
 113                 public void actionPerformed(ActionEvent e)\r
 114                 {\r
 115                     ok_actionPerformed(e);\r
 116                 }\r
 117             });\r
 118         cancel.setText("Cancel");\r
 119         cancel.addActionListener(new ActionListener()\r
 120             {\r
 121                 public void actionPerformed(ActionEvent e)\r
 122                 {\r
 123                     cancel_actionPerformed(e);\r
 124                 }\r
 125             });\r
 126         quality.setEnabled(false);\r
 127         quality.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 128         quality.setHorizontalAlignment(SwingConstants.RIGHT);\r
 129         quality.setHorizontalTextPosition(SwingConstants.LEFT);\r
 130         quality.setSelected(true);\r
 131         quality.setText("Quality");\r
 132         quality.setBounds(new Rectangle(248, 53, 81, 23));\r
 133         visualTab.setBorder(new TitledBorder("Open new alignment"));\r
 134         visualTab.setBounds(new Rectangle(9, 20, 442, 241));\r
 135         visualTab.setLayout(null);\r
 136         fullID.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 137         fullID.setHorizontalAlignment(SwingConstants.RIGHT);\r
 138         fullID.setHorizontalTextPosition(SwingConstants.LEFT);\r
 139         fullID.setText("Full Sequence ID");\r
 140         fullID.setBounds(new Rectangle(9, 78, 129, 23));\r
 141         fullScreen.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 142         fullScreen.setHorizontalAlignment(SwingConstants.RIGHT);\r
 143         fullScreen.setHorizontalTextPosition(SwingConstants.LEFT);\r
 144         fullScreen.setText("Maximise Window");\r
 145         fullScreen.setBounds(new Rectangle(5, 29, 132, 23));\r
 146         conservation.setEnabled(false);\r
 147         conservation.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 148         conservation.setHorizontalAlignment(SwingConstants.RIGHT);\r
 149         conservation.setHorizontalTextPosition(SwingConstants.LEFT);\r
 150         conservation.setSelected(true);\r
 151         conservation.setText("Conservation");\r
 152         conservation.setBounds(new Rectangle(137, 53, 113, 23));\r
 153         identity.setEnabled(false);\r
 154         identity.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 155         identity.setHorizontalAlignment(SwingConstants.RIGHT);\r
 156         identity.setHorizontalTextPosition(SwingConstants.LEFT);\r
 157         identity.setSelected(true);\r
 158         identity.setText("Consensus");\r
 159         identity.setBounds(new Rectangle(326, 53, 99, 23));\r
 160         annotations.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 161         annotations.setHorizontalAlignment(SwingConstants.RIGHT);\r
 162         annotations.setHorizontalTextPosition(SwingConstants.LEFT);\r
 163         annotations.setSelected(true);\r
 164         annotations.setText("Show Annotations");\r
 165         annotations.setBounds(new Rectangle(10, 53, 128, 23));\r
 166         annotations.addActionListener(new ActionListener()\r
 167             {\r
 168                 public void actionPerformed(ActionEvent e)\r
 169                 {\r
 170                     annotations_actionPerformed(e);\r
 171                 }\r
 172             });\r
 173         gapLabel.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 174         gapLabel.setHorizontalAlignment(SwingConstants.RIGHT);\r
 175         gapLabel.setText("Gap Symbol");\r
 176         gapLabel.setBounds(new Rectangle(41, 142, 76, 15));\r
 177         colour.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 178         colour.setBounds(new Rectangle(121, 168, 154, 21));\r
 179         colourLabel.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 180         colourLabel.setHorizontalAlignment(SwingConstants.RIGHT);\r
 181         colourLabel.setText("Colour");\r
 182         colourLabel.setBounds(new Rectangle(60, 172, 58, 15));\r
 183         fontLabel.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 184         fontLabel.setHorizontalAlignment(SwingConstants.RIGHT);\r
 185         fontLabel.setText("Font");\r
 186         fontLabel.setBounds(new Rectangle(83, 114, 34, 15));\r
 187         fontSizeCB.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 188         fontSizeCB.setBounds(new Rectangle(304, 109, 49, 21));\r
 189         fontStyleCB.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 190         fontStyleCB.setBounds(new Rectangle(353, 109, 80, 21));\r
 191         fontNameCB.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 192         fontNameCB.setBounds(new Rectangle(121, 109, 183, 21));\r
 193         gapSymbolCB.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 194         gapSymbolCB.setBounds(new Rectangle(121, 140, 67, 21));\r
 195         startupCheckbox.setText("Open file");\r
 196         startupCheckbox.setBounds(new Rectangle(4, 200, 115, 23));\r
 197         startupCheckbox.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 198         startupCheckbox.setHorizontalAlignment(SwingConstants.RIGHT);\r
 199         startupCheckbox.setHorizontalTextPosition(SwingConstants.LEFT);\r
 200         startupCheckbox.setSelected(true);\r
 201         startupFileTextfield.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 202         startupFileTextfield.setBounds(new Rectangle(121, 200, 309, 20));\r
 203         startupFileTextfield.addMouseListener(new MouseAdapter()\r
 204             {\r
 205                 public void mouseClicked(MouseEvent e)\r
 206                 {\r
 207                     if (e.getClickCount() > 1)\r
 208                     {\r
 209                         startupFileTextfield_mouseClicked();\r
 210                     }\r
 211                 }\r
 212             });\r
 213 \r
 214      connectTab.setLayout(gridBagLayout3);\r
 215     serverLabel.setText("Address");\r
 216     serverLabel.setHorizontalAlignment(SwingConstants.RIGHT);\r
 217     serverLabel.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 218     proxyServerTB.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 219     proxyPortTB.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 220     portLabel.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 221     portLabel.setHorizontalAlignment(SwingConstants.RIGHT);\r
 222     portLabel.setText("Port");\r
 223     browserLabel.setFont(new java.awt.Font("SansSerif", 0, 11));\r
 224     browserLabel.setHorizontalAlignment(SwingConstants.TRAILING);\r
 225     browserLabel.setText("Default Browser (Unix)");\r
 226     defaultBrowser.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 227     defaultBrowser.setText("");\r
 228     newLink.setText("New");\r
 229     newLink.addActionListener(new java.awt.event.ActionListener() {\r
 230       public void actionPerformed(ActionEvent e) {\r
 231         newLink_actionPerformed(e);\r
 232       }\r
 233     });\r
 234     editLink.setText("Edit");\r
 235     editLink.addActionListener(new java.awt.event.ActionListener() {\r
 236       public void actionPerformed(ActionEvent e) {\r
 237         editLink_actionPerformed(e);\r
 238       }\r
 239     });\r
 240     deleteLink.setText("Delete");\r
 241     deleteLink.addActionListener(new java.awt.event.ActionListener() {\r
 242       public void actionPerformed(ActionEvent e) {\r
 243         deleteLink_actionPerformed(e);\r
 244       }\r
 245     });\r
 246 \r
 247     linkURLList.addListSelectionListener(new ListSelectionListener()\r
 248          {\r
 249             public void valueChanged(ListSelectionEvent e)\r
 250             {\r
 251                int index = linkURLList.getSelectedIndex();\r
 252                linkNameList.setSelectedIndex(index);\r
 253             }\r
 254          });\r
 255 \r
 256     linkNameList.addListSelectionListener(new ListSelectionListener()\r
 257         {\r
 258           public void valueChanged(ListSelectionEvent e)\r
 259           {\r
 260               int index = linkNameList.getSelectedIndex();\r
 261               linkURLList.setSelectedIndex(index);\r
 262           }\r
 263         });\r
 264 \r
 265     linkScrollPane.setBorder(null);\r
 266     linkPanel.setBorder(new TitledBorder("URL link from Sequence ID"));\r
 267     linkPanel.setLayout(borderLayout2);\r
 268     editLinkButtons.setLayout(gridLayout1);\r
 269     gridLayout1.setRows(3);\r
 270     linkNameList.setFont(new java.awt.Font("Verdana", Font.ITALIC, 11));\r
 271     linkNameList.setSelectionMode(ListSelectionModel.SINGLE_SELECTION);\r
 272     linkPanel2.setLayout(borderLayout3);\r
 273     linkURLList.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 274     linkURLList.setSelectionMode(ListSelectionModel.SINGLE_SELECTION);\r
 275 \r
 276     defaultBrowser.addMouseListener(new MouseAdapter()\r
 277     {\r
 278       public void mouseClicked(MouseEvent e)\r
 279       {\r
 280         if (e.getClickCount() > 1)\r
 281             {\r
 282               defaultBrowser_mouseClicked(e);\r
 283             }\r
 284       }\r
 285     });\r
 286     useProxy.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 287     useProxy.setHorizontalAlignment(SwingConstants.RIGHT);\r
 288     useProxy.setHorizontalTextPosition(SwingConstants.LEADING);\r
 289     useProxy.setText("Use a proxy server");\r
 290     useProxy.addActionListener(new ActionListener()\r
 291     {\r
 292       public void actionPerformed(ActionEvent e)\r
 293       {\r
 294         useProxy_actionPerformed();\r
 295       }\r
 296     });\r
 297     jPanel1.setBorder(titledBorder1);\r
 298     jPanel1.setLayout(gridBagLayout1);\r
 299     sortby.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 300     sortby.setBounds(new Rectangle(122, 232, 308, 21));\r
 301     sortLabel.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 302     sortLabel.setHorizontalAlignment(SwingConstants.RIGHT);\r
 303     sortLabel.setText("Sort by");\r
 304     sortLabel.setBounds(new Rectangle(53, 235, 64, 15));\r
 305     visualTab.add(annotations);\r
 306         visualTab.add(conservation);\r
 307         visualTab.add(quality);\r
 308         visualTab.add(fullID);\r
 309         visualTab.add(gapSymbolCB);\r
 310         visualTab.add(fontLabel);\r
 311         visualTab.add(fontNameCB);\r
 312     visualTab.add(colourLabel);\r
 313         visualTab.add(gapLabel);\r
 314     visualTab.add(colour);\r
 315         visualTab.add(fontSizeCB);\r
 316         visualTab.add(fontStyleCB);\r
 317         visualTab.add(identity);\r
 318         visualTab.add(fullScreen);\r
 319     visualTab.add(startupCheckbox);\r
 320     visualTab.add(startupFileTextfield);\r
 321     visualTab.add(sortby);\r
 322     visualTab.add(sortLabel);\r
 323 \r
 324     tabbedPane.add(visualTab, "Visual");\r
 325     tabbedPane.add(connectTab, "Connections");\r
 326 \r
 327     linkPanel.add(editLinkButtons, BorderLayout.EAST);\r
 328     editLinkButtons.add(newLink, null);\r
 329     editLinkButtons.add(editLink, null);\r
 330     editLinkButtons.add(deleteLink, null);\r
 331     linkPanel.add(linkScrollPane, BorderLayout.CENTER);\r
 332     linkScrollPane.getViewport().add(linkPanel2, null);\r
 333     linkPanel2.add(linkURLList, BorderLayout.CENTER);\r
 334     linkPanel2.add(linkNameList, BorderLayout.WEST);\r
 335         okCancelPanel.add(ok);\r
 336         okCancelPanel.add(cancel);\r
 337         this.add(tabbedPane, java.awt.BorderLayout.CENTER);\r
 338 \r
 339         this.add(okCancelPanel, java.awt.BorderLayout.SOUTH);\r
 340     jPanel1.add(serverLabel, new GridBagConstraints(0, 1, 1, 1, 0.0, 0.0\r
 341         , GridBagConstraints.WEST, GridBagConstraints.NONE,\r
 342         new Insets(0, 2, 4, 0), 5, 0));\r
 343     jPanel1.add(portLabel, new GridBagConstraints(2, 1, 1, 1, 0.0, 0.0\r
 344                                                   , GridBagConstraints.WEST,\r
 345                                                   GridBagConstraints.NONE,\r
 346                                                   new Insets(0, 0, 4, 0), 11, 6));\r
 347     connectTab.add(linkPanel, new GridBagConstraints(0, 0, 2, 1, 1.0, 1.0\r
 348         , GridBagConstraints.CENTER, GridBagConstraints.BOTH,\r
 349         new Insets(16, 0, 0, 12), 359, -17));\r
 350     connectTab.add(jPanel1, new GridBagConstraints(0, 2, 2, 1, 1.0, 1.0\r
 351         , GridBagConstraints.CENTER, GridBagConstraints.BOTH,\r
 352         new Insets(21, 0, 35, 12), 4, 6));\r
 353     connectTab.add(browserLabel, new GridBagConstraints(0, 1, 1, 1, 0.0, 0.0\r
 354         , GridBagConstraints.WEST, GridBagConstraints.NONE,\r
 355         new Insets(16, 0, 0, 0), 5, 1));\r
 356     jPanel1.add(proxyPortTB, new GridBagConstraints(3, 1, 1, 1, 1.0, 0.0\r
 357         , GridBagConstraints.WEST, GridBagConstraints.HORIZONTAL,\r
 358         new Insets(0, 2, 4, 2), 54, 1));\r
 359     jPanel1.add(proxyServerTB, new GridBagConstraints(1, 1, 1, 1, 1.0, 0.0\r
 360         , GridBagConstraints.WEST, GridBagConstraints.HORIZONTAL,\r
 361         new Insets(0, 2, 4, 0), 263, 1));\r
 362     connectTab.add(defaultBrowser, new GridBagConstraints(1, 1, 1, 1, 1.0, 0.0\r
 363         , GridBagConstraints.WEST, GridBagConstraints.HORIZONTAL,\r
 364         new Insets(15, 0, 0, 15), 307, 1));\r
 365     jPanel1.add(useProxy, new GridBagConstraints(0, 0, 2, 1, 0.0, 0.0\r
 366                                                  , GridBagConstraints.WEST,\r
 367                                                  GridBagConstraints.NONE,\r
 368                                                  new Insets(0, 2, 5, 185), 2,\r
 369                                                  -4));\r
 370     DefaultListCellRenderer dlcr = new DefaultListCellRenderer();\r
 371         dlcr.setHorizontalAlignment(DefaultListCellRenderer.CENTER);\r
 372         gapSymbolCB.setRenderer(dlcr);\r
 373     }\r
 374 \r
 375     /**\r
 376      * DOCUMENT ME!\r
 377      *\r
 378      * @param e DOCUMENT ME!\r
 379      */\r
 380     public void ok_actionPerformed(ActionEvent e)\r
 381     {\r
 382     }\r
 383 \r
 384     /**\r
 385      * DOCUMENT ME!\r
 386      *\r
 387      * @param e DOCUMENT ME!\r
 388      */\r
 389     public void cancel_actionPerformed(ActionEvent e)\r
 390     {\r
 391     }\r
 392 \r
 393     /**\r
 394      * DOCUMENT ME!\r
 395      *\r
 396      * @param e DOCUMENT ME!\r
 397      */\r
 398     public void annotations_actionPerformed(ActionEvent e)\r
 399     {\r
 400     }\r
 401 \r
 402 \r
 403     /**\r
 404      * DOCUMENT ME!\r
 405      */\r
 406     public void startupFileTextfield_mouseClicked()\r
 407     {\r
 408     }\r
 409 \r
 410 \r
 411   public void newLink_actionPerformed(ActionEvent e) {\r
 412 \r
 413   }\r
 414 \r
 415   public void editLink_actionPerformed(ActionEvent e) {\r
 416 \r
 417   }\r
 418 \r
 419   public void deleteLink_actionPerformed(ActionEvent e) {\r
 420 \r
 421   }\r
 422 \r
 423   public void defaultBrowser_mouseClicked(MouseEvent e)\r
 424   {\r
 425 \r
 426   }\r
 427 \r
 428   public void linkURLList_keyTyped(KeyEvent e)\r
 429   {\r
 430 \r
 431   }\r
 432 \r
 433   public void useProxy_actionPerformed()\r
 434   {\r
 435       proxyServerTB.setEnabled(useProxy.isSelected());\r
 436       proxyPortTB.setEnabled(useProxy.isSelected());\r
 437   }\r
 438 }\r