src/jalview/jbgui/GStructureViewer.java

   1 /*\r
   2  * Jalview - A Sequence Alignment Editor and Viewer\r
   3  * Copyright (C) 2007 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
   4  *\r
   5  * This program is free software; you can redistribute it and/or\r
   6  * modify it under the terms of the GNU General Public License\r
   7  * as published by the Free Software Foundation; either version 2\r
   8  * of the License, or (at your option) any later version.\r
   9  *\r
  10  * This program is distributed in the hope that it will be useful,\r
  11  * but WITHOUT ANY WARRANTY; without even the implied warranty of\r
  12  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the\r
  13  * GNU General Public License for more details.\r
  14  *\r
  15  * You should have received a copy of the GNU General Public License\r
  16  * along with this program; if not, write to the Free Software\r
  17  * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA\r
  18  */\r
  19 \r
  20 package jalview.jbgui;\r
  21 \r
  22 import javax.swing.*;\r
  23 import java.awt.event.ActionListener;\r
  24 import java.awt.event.ActionEvent;\r
  25 \r
  26 public class GStructureViewer  extends JInternalFrame\r
  27 {\r
  28   public GStructureViewer()\r
  29   {\r
  30     try\r
  31     {\r
  32       jbInit();\r
  33     }\r
  34     catch (Exception ex)\r
  35     {\r
  36       ex.printStackTrace();\r
  37     }\r
  38   }\r
  39 \r
  40   private void jbInit()\r
  41       throws Exception\r
  42   {\r
  43     this.setJMenuBar(menuBar);\r
  44     fileMenu.setText("File");\r
  45     savemenu.setActionCommand("Save Image");\r
  46     savemenu.setText("Save As");\r
  47     pdbFile.setText("PDB File");\r
  48     pdbFile.addActionListener(new ActionListener()\r
  49     {\r
  50       public void actionPerformed(ActionEvent actionEvent)\r
  51       {\r
  52         pdbFile_actionPerformed(actionEvent);\r
  53       }\r
  54     });\r
  55     png.setText("PNG");\r
  56     png.addActionListener(new ActionListener()\r
  57     {\r
  58       public void actionPerformed(ActionEvent actionEvent)\r
  59       {\r
  60         png_actionPerformed(actionEvent);\r
  61       }\r
  62     });\r
  63     eps.setText("EPS");\r
  64     eps.addActionListener(new ActionListener()\r
  65     {\r
  66       public void actionPerformed(ActionEvent actionEvent)\r
  67       {\r
  68         eps_actionPerformed(actionEvent);\r
  69       }\r
  70     });\r
  71     viewMapping.setText("View Mapping");\r
  72     viewMapping.addActionListener(new ActionListener()\r
  73     {\r
  74       public void actionPerformed(ActionEvent actionEvent)\r
  75       {\r
  76         viewMapping_actionPerformed(actionEvent);\r
  77       }\r
  78     });\r
  79     viewMenu.setText("View");\r
  80     chainMenu.setText("Show Chain");\r
  81     colourMenu.setText("Colours");\r
  82     backGround.setText("Background Colour...");\r
  83     backGround.addActionListener(new ActionListener()\r
  84     {\r
  85       public void actionPerformed(ActionEvent actionEvent)\r
  86       {\r
  87         backGround_actionPerformed(actionEvent);\r
  88       }\r
  89     });\r
  90     seqColour.setSelected(true);\r
  91     seqColour.setText("By Sequence");\r
  92     seqColour.addActionListener(new ActionListener()\r
  93     {\r
  94       public void actionPerformed(ActionEvent actionEvent)\r
  95       {\r
  96         seqColour_actionPerformed(actionEvent);\r
  97       }\r
  98     });\r
  99     chainColour.setText("By Chain");\r
 100     chainColour.addActionListener(new ActionListener()\r
 101     {\r
 102       public void actionPerformed(ActionEvent actionEvent)\r
 103       {\r
 104         chainColour_actionPerformed(actionEvent);\r
 105       }\r
 106     });\r
 107     chargeColour.setText("Charge & Cysteine");\r
 108     chargeColour.addActionListener(new ActionListener()\r
 109     {\r
 110       public void actionPerformed(ActionEvent actionEvent)\r
 111       {\r
 112         chargeColour_actionPerformed(actionEvent);\r
 113       }\r
 114     });\r
 115     zappoColour.setText("Zappo");\r
 116     zappoColour.addActionListener(new ActionListener()\r
 117     {\r
 118       public void actionPerformed(ActionEvent actionEvent)\r
 119       {\r
 120         zappoColour_actionPerformed(actionEvent);\r
 121       }\r
 122     });\r
 123     taylorColour.setText("Taylor");\r
 124     taylorColour.addActionListener(new ActionListener()\r
 125     {\r
 126       public void actionPerformed(ActionEvent actionEvent)\r
 127       {\r
 128         taylorColour_actionPerformed(actionEvent);\r
 129       }\r
 130     });\r
 131     hydroColour.setText("Hydro");\r
 132     hydroColour.addActionListener(new ActionListener()\r
 133     {\r
 134       public void actionPerformed(ActionEvent actionEvent)\r
 135       {\r
 136         hydroColour_actionPerformed(actionEvent);\r
 137       }\r
 138     });\r
 139     strandColour.setText("Strand");\r
 140     strandColour.addActionListener(new ActionListener()\r
 141     {\r
 142       public void actionPerformed(ActionEvent actionEvent)\r
 143       {\r
 144         strandColour_actionPerformed(actionEvent);\r
 145       }\r
 146     });\r
 147     helixColour.setText("Helix Propensity");\r
 148     helixColour.addActionListener(new ActionListener()\r
 149     {\r
 150       public void actionPerformed(ActionEvent actionEvent)\r
 151       {\r
 152         helixColour_actionPerformed(actionEvent);\r
 153       }\r
 154     });\r
 155     turnColour.setText("Turn Propensity");\r
 156     turnColour.addActionListener(new ActionListener()\r
 157     {\r
 158       public void actionPerformed(ActionEvent actionEvent)\r
 159       {\r
 160         turnColour_actionPerformed(actionEvent);\r
 161       }\r
 162     });\r
 163     buriedColour.setText("Buried Index");\r
 164     buriedColour.addActionListener(new ActionListener()\r
 165     {\r
 166       public void actionPerformed(ActionEvent actionEvent)\r
 167       {\r
 168         buriedColour_actionPerformed(actionEvent);\r
 169       }\r
 170     });\r
 171     userColour.setText("User Defined ...");\r
 172     userColour.addActionListener(new ActionListener()\r
 173     {\r
 174       public void actionPerformed(ActionEvent actionEvent)\r
 175       {\r
 176         userColour_actionPerformed(actionEvent);\r
 177       }\r
 178     });\r
 179     helpMenu.setText("Help");\r
 180     jmolHelp.setText("Jmol Help");\r
 181     jmolHelp.addActionListener(new ActionListener()\r
 182     {\r
 183       public void actionPerformed(ActionEvent actionEvent)\r
 184       {\r
 185         jmolHelp_actionPerformed(actionEvent);\r
 186       }\r
 187     });\r
 188     menuBar.add(fileMenu);\r
 189     menuBar.add(viewMenu);\r
 190     menuBar.add(colourMenu);\r
 191     menuBar.add(helpMenu);\r
 192     fileMenu.add(savemenu);\r
 193     fileMenu.add(viewMapping);\r
 194     savemenu.add(pdbFile);\r
 195     savemenu.add(png);\r
 196     savemenu.add(eps);\r
 197     viewMenu.add(chainMenu);\r
 198     colourMenu.add(seqColour);\r
 199     colourMenu.add(chainColour);\r
 200     colourMenu.add(chargeColour);\r
 201     colourMenu.add(zappoColour);\r
 202     colourMenu.add(taylorColour);\r
 203     colourMenu.add(hydroColour);\r
 204     colourMenu.add(helixColour);\r
 205     colourMenu.add(strandColour);\r
 206     colourMenu.add(turnColour);\r
 207     colourMenu.add(buriedColour);\r
 208     colourMenu.add(userColour);\r
 209     colourMenu.add(backGround);\r
 210     helpMenu.add(jmolHelp);\r
 211   }\r
 212 \r
 213   JMenuBar menuBar = new JMenuBar();\r
 214   JMenu fileMenu = new JMenu();\r
 215   JMenu savemenu = new JMenu();\r
 216   JMenuItem pdbFile = new JMenuItem();\r
 217   JMenuItem png = new JMenuItem();\r
 218   JMenuItem eps = new JMenuItem();\r
 219   JMenuItem viewMapping = new JMenuItem();\r
 220   JMenu viewMenu = new JMenu();\r
 221   protected JMenu chainMenu = new JMenu();\r
 222   JMenu jMenu1 = new JMenu();\r
 223   JMenu colourMenu = new JMenu();\r
 224   JMenuItem backGround = new JMenuItem();\r
 225   protected JCheckBoxMenuItem seqColour = new JCheckBoxMenuItem();\r
 226   JMenuItem chainColour = new JMenuItem();\r
 227   JMenuItem chargeColour = new JMenuItem();\r
 228   JMenuItem zappoColour = new JMenuItem();\r
 229   JMenuItem taylorColour = new JMenuItem();\r
 230   JMenuItem hydroColour = new JMenuItem();\r
 231   JMenuItem strandColour = new JMenuItem();\r
 232   JMenuItem helixColour = new JMenuItem();\r
 233   JMenuItem turnColour = new JMenuItem();\r
 234   JMenuItem buriedColour = new JMenuItem();\r
 235   JMenuItem userColour = new JMenuItem();\r
 236   JMenu helpMenu = new JMenu();\r
 237   JMenuItem jmolHelp = new JMenuItem();\r
 238   public void pdbFile_actionPerformed(ActionEvent actionEvent)\r
 239   {\r
 240 \r
 241   }\r
 242 \r
 243   public void png_actionPerformed(ActionEvent actionEvent)\r
 244   {\r
 245 \r
 246   }\r
 247 \r
 248   public void eps_actionPerformed(ActionEvent actionEvent)\r
 249   {\r
 250 \r
 251   }\r
 252 \r
 253   public void viewMapping_actionPerformed(ActionEvent actionEvent)\r
 254   {\r
 255 \r
 256   }\r
 257 \r
 258   public void seqColour_actionPerformed(ActionEvent actionEvent)\r
 259   {\r
 260 \r
 261   }\r
 262 \r
 263   public void chainColour_actionPerformed(ActionEvent actionEvent)\r
 264   {\r
 265 \r
 266   }\r
 267 \r
 268   public void chargeColour_actionPerformed(ActionEvent actionEvent)\r
 269   {\r
 270 \r
 271   }\r
 272 \r
 273   public void zappoColour_actionPerformed(ActionEvent actionEvent)\r
 274   {\r
 275 \r
 276   }\r
 277 \r
 278   public void taylorColour_actionPerformed(ActionEvent actionEvent)\r
 279   {\r
 280 \r
 281   }\r
 282 \r
 283   public void hydroColour_actionPerformed(ActionEvent actionEvent)\r
 284   {\r
 285 \r
 286   }\r
 287 \r
 288   public void helixColour_actionPerformed(ActionEvent actionEvent)\r
 289   {\r
 290 \r
 291   }\r
 292 \r
 293   public void strandColour_actionPerformed(ActionEvent actionEvent)\r
 294   {\r
 295 \r
 296   }\r
 297 \r
 298   public void turnColour_actionPerformed(ActionEvent actionEvent)\r
 299   {\r
 300 \r
 301   }\r
 302 \r
 303   public void buriedColour_actionPerformed(ActionEvent actionEvent)\r
 304   {\r
 305 \r
 306   }\r
 307 \r
 308   public void userColour_actionPerformed(ActionEvent actionEvent)\r
 309   {\r
 310 \r
 311   }\r
 312 \r
 313   public void backGround_actionPerformed(ActionEvent actionEvent)\r
 314   {\r
 315 \r
 316   }\r
 317 \r
 318   public void jmolHelp_actionPerformed(ActionEvent actionEvent)\r
 319   {\r
 320 \r
 321   }\r
 322 }\r