src/jalview/jbgui/GTreePanel.java

   1 /*
   2  * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
   3  * Copyright (C) $$Year-Rel$$ The Jalview Authors
   4  *
   5  * This file is part of Jalview.
   6  *
   7  * Jalview is free software: you can redistribute it and/or
   8  * modify it under the terms of the GNU General Public License
   9  * as published by the Free Software Foundation, either version 3
  10  * of the License, or (at your option) any later version.
  11  *
  12  * Jalview is distributed in the hope that it will be useful, but
  13  * WITHOUT ANY WARRANTY; without even the implied warranty
  14  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
  15  * PURPOSE.  See the GNU General Public License for more details.
  16  *
  17  * You should have received a copy of the GNU General Public License
  18  * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  19  * The Jalview Authors are detailed in the 'AUTHORS' file.
  20  */
  21 package jalview.jbgui;
  22
  23 import jalview.util.ImageMaker.TYPE;
  24 import jalview.util.MessageManager;
  25
  26 import java.awt.BorderLayout;
  27 import java.awt.Color;
  28 import java.awt.event.ActionEvent;
  29 import java.awt.event.ActionListener;
  30
  31 import javax.swing.JCheckBoxMenuItem;
  32 import javax.swing.JInternalFrame;
  33 import javax.swing.JMenu;
  34 import javax.swing.JMenuBar;
  35 import javax.swing.JMenuItem;
  36 import javax.swing.JScrollPane;
  37 import javax.swing.event.MenuEvent;
  38 import javax.swing.event.MenuListener;
  39
  40 public class GTreePanel extends JInternalFrame
  41 {
  42   BorderLayout borderLayout1 = new BorderLayout();
  43
  44   public JScrollPane scrollPane = new JScrollPane();
  45
  46   JMenuBar jMenuBar1 = new JMenuBar();
  47
  48   JMenu fileMenu = new JMenu();
  49
  50   JMenuItem saveAsNewick = new JMenuItem();
  51
  52   JMenuItem printMenu = new JMenuItem();
  53
  54   protected JMenu viewMenu = new JMenu();
  55
  56   public JMenuItem font = new JMenuItem();
  57
  58   public JMenuItem sortAssocViews = new JMenuItem();
  59
  60   public JCheckBoxMenuItem bootstrapMenu = new JCheckBoxMenuItem();
  61
  62   public JCheckBoxMenuItem distanceMenu = new JCheckBoxMenuItem();
  63
  64   public JCheckBoxMenuItem fitToWindow = new JCheckBoxMenuItem();
  65
  66   public JCheckBoxMenuItem placeholdersMenu = new JCheckBoxMenuItem();
  67
  68   JMenuItem pngTree = new JMenuItem();
  69
  70   JMenuItem epsTree = new JMenuItem();
  71
  72   JMenu saveAsMenu = new JMenu();
  73
  74   JMenuItem textbox = new JMenuItem();
  75
  76   public JMenuItem originalSeqData = new JMenuItem();
  77
  78   protected JMenu associateLeavesMenu = new JMenu();
  79
  80   public GTreePanel()
  81   {
  82     try
  83     {
  84       jbInit();
  85       this.setJMenuBar(jMenuBar1);
  86     } catch (Exception e)
  87     {
  88       e.printStackTrace();
  89     }
  90   }
  91
  92   private void jbInit() throws Exception
  93   {
  94     this.getContentPane().setLayout(borderLayout1);
  95     this.setBackground(Color.white);
  96     this.setFont(new java.awt.Font("Verdana", 0, 12));
  97     scrollPane.setOpaque(false);
  98     fileMenu.setText(MessageManager.getString("action.file"));
  99     saveAsNewick.setText(MessageManager.getString("label.newick_format"));
 100     saveAsNewick.addActionListener(new ActionListener()
 101     {
 102       public void actionPerformed(ActionEvent e)
 103       {
 104         saveAsNewick_actionPerformed(e);
 105       }
 106     });
 107     printMenu.setText(MessageManager.getString("action.print"));
 108     printMenu.addActionListener(new java.awt.event.ActionListener()
 109     {
 110       public void actionPerformed(ActionEvent e)
 111       {
 112         printMenu_actionPerformed(e);
 113       }
 114     });
 115     viewMenu.setText(MessageManager.getString("action.view"));
 116     viewMenu.addMenuListener(new MenuListener()
 117     {
 118       public void menuSelected(MenuEvent e)
 119       {
 120         viewMenu_menuSelected();
 121       }
 122
 123       public void menuDeselected(MenuEvent e)
 124       {
 125       }
 126
 127       public void menuCanceled(MenuEvent e)
 128       {
 129       }
 130     });
 131     sortAssocViews.setText(
 132             MessageManager.getString("label.sort_alignment_by_tree"));
 133     sortAssocViews.addActionListener(new java.awt.event.ActionListener()
 134     {
 135       public void actionPerformed(ActionEvent e)
 136       {
 137         sortByTree_actionPerformed();
 138       }
 139     });
 140     font.setText(MessageManager.getString("action.font"));
 141     font.addActionListener(new java.awt.event.ActionListener()
 142     {
 143       public void actionPerformed(ActionEvent e)
 144       {
 145         font_actionPerformed(e);
 146       }
 147     });
 148     bootstrapMenu.setText(
 149             MessageManager.getString("label.show_bootstrap_values"));
 150     bootstrapMenu.addActionListener(new java.awt.event.ActionListener()
 151     {
 152       public void actionPerformed(ActionEvent e)
 153       {
 154         bootstrapMenu_actionPerformed(e);
 155       }
 156     });
 157     distanceMenu.setText(MessageManager.getString("label.show_distances"));
 158     distanceMenu.addActionListener(new java.awt.event.ActionListener()
 159     {
 160       public void actionPerformed(ActionEvent e)
 161       {
 162         distanceMenu_actionPerformed(e);
 163       }
 164     });
 165     fitToWindow.setSelected(true);
 166     fitToWindow.setText(MessageManager.getString("label.fit_to_window"));
 167     fitToWindow.addActionListener(new java.awt.event.ActionListener()
 168     {
 169       public void actionPerformed(ActionEvent e)
 170       {
 171         fitToWindow_actionPerformed(e);
 172       }
 173     });
 174     epsTree.setText("EPS");
 175     epsTree.addActionListener(new java.awt.event.ActionListener()
 176     {
 177       public void actionPerformed(ActionEvent e)
 178       {
 179         writeTreeImage(TYPE.EPS);
 180       }
 181     });
 182     pngTree.setText("PNG");
 183     pngTree.addActionListener(new java.awt.event.ActionListener()
 184     {
 185       public void actionPerformed(ActionEvent e)
 186       {
 187         writeTreeImage(TYPE.PNG);
 188       }
 189     });
 190     saveAsMenu.setText(MessageManager.getString("action.save_as"));
 191     placeholdersMenu.setToolTipText(MessageManager.getString(
 192             "label.marks_leaves_tree_not_associated_with_sequence"));
 193     placeholdersMenu.setText(
 194             MessageManager.getString("label.mark_unlinked_leaves"));
 195     placeholdersMenu.addActionListener(new ActionListener()
 196     {
 197       public void actionPerformed(ActionEvent e)
 198       {
 199         placeholdersMenu_actionPerformed(e);
 200       }
 201     });
 202     textbox.setText(MessageManager.getString("label.out_to_textbox"));
 203     textbox.addActionListener(new ActionListener()
 204     {
 205       public void actionPerformed(ActionEvent e)
 206       {
 207         textbox_actionPerformed(e);
 208       }
 209     });
 210     originalSeqData.setText(MessageManager.getString("label.input_data"));
 211     originalSeqData.addActionListener(new ActionListener()
 212     {
 213       public void actionPerformed(ActionEvent e)
 214       {
 215         originalSeqData_actionPerformed(e);
 216       }
 217     });
 218     associateLeavesMenu.setText(
 219             MessageManager.getString("label.associate_leaves_with"));
 220     this.getContentPane().add(scrollPane, BorderLayout.CENTER);
 221     jMenuBar1.add(fileMenu);
 222     jMenuBar1.add(viewMenu);
 223     fileMenu.add(saveAsMenu);
 224     fileMenu.add(textbox);
 225     fileMenu.add(printMenu);
 226     fileMenu.add(originalSeqData);
 227     viewMenu.add(fitToWindow);
 228     viewMenu.add(font);
 229     viewMenu.add(distanceMenu);
 230     viewMenu.add(bootstrapMenu);
 231     viewMenu.add(placeholdersMenu);
 232     viewMenu.add(sortAssocViews);
 233     viewMenu.add(associateLeavesMenu);
 234     saveAsMenu.add(saveAsNewick);
 235     saveAsMenu.add(epsTree);
 236     saveAsMenu.add(pngTree);
 237   }
 238
 239   public void printMenu_actionPerformed(ActionEvent e)
 240   {
 241   }
 242
 243   public void font_actionPerformed(ActionEvent e)
 244   {
 245   }
 246
 247   public void distanceMenu_actionPerformed(ActionEvent e)
 248   {
 249   }
 250
 251   public void bootstrapMenu_actionPerformed(ActionEvent e)
 252   {
 253   }
 254
 255   public void fitToWindow_actionPerformed(ActionEvent e)
 256   {
 257   }
 258
 259   public void writeTreeImage(TYPE imageType)
 260   {
 261   }
 262
 263   public void saveAsNewick_actionPerformed(ActionEvent e)
 264   {
 265   }
 266
 267   public void placeholdersMenu_actionPerformed(ActionEvent e)
 268   {
 269   }
 270
 271   public void textbox_actionPerformed(ActionEvent e)
 272   {
 273   }
 274
 275   public void fullid_actionPerformed(ActionEvent e)
 276   {
 277
 278   }
 279
 280   public void originalSeqData_actionPerformed(ActionEvent e)
 281   {
 282
 283   }
 284
 285   public void viewMenu_menuSelected()
 286   {
 287   }
 288
 289   public void sortByTree_actionPerformed()
 290   {
 291
 292   }
 293
 294 }