2 * This class was automatically generated with
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3 * <a href="http://www.castor.org">Castor 0.9.6</a>, using an XML
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8 package jalview.schemabinding.version2;
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10 //---------------------------------/
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11 //- Imported classes and packages -/
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12 //---------------------------------/
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14 import org.exolab.castor.mapping.AccessMode;
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15 import org.exolab.castor.xml.TypeValidator;
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16 import org.exolab.castor.xml.XMLFieldDescriptor;
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17 import org.exolab.castor.xml.validators.*;
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20 * Class JSeqDescriptor.
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22 * @version $Revision$ $Date$
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24 public class JSeqDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {
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27 //--------------------------/
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28 //- Class/Member Variables -/
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29 //--------------------------/
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34 private java.lang.String nsPrefix;
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39 private java.lang.String nsURI;
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44 private java.lang.String xmlName;
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49 private org.exolab.castor.xml.XMLFieldDescriptor identity;
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56 public JSeqDescriptor() {
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58 nsURI = "www.jalview.org";
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61 //-- set grouping compositor
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62 setCompositorAsSequence();
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63 org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
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64 org.exolab.castor.xml.XMLFieldHandler handler = null;
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65 org.exolab.castor.xml.FieldValidator fieldValidator = null;
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66 //-- initialize attribute descriptors
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69 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_colour", "colour", org.exolab.castor.xml.NodeType.Attribute);
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70 handler = (new org.exolab.castor.xml.XMLFieldHandler() {
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71 public java.lang.Object getValue( java.lang.Object object )
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72 throws IllegalStateException
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74 JSeq target = (JSeq) object;
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75 if(!target.hasColour())
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77 return new java.lang.Integer(target.getColour());
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79 public void setValue( java.lang.Object object, java.lang.Object value)
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80 throws IllegalStateException, IllegalArgumentException
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83 JSeq target = (JSeq) object;
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84 // if null, use delete method for optional primitives
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85 if (value == null) {
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86 target.deleteColour();
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89 target.setColour( ((java.lang.Integer)value).intValue());
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91 catch (java.lang.Exception ex) {
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92 throw new IllegalStateException(ex.toString());
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95 public java.lang.Object newInstance( java.lang.Object parent ) {
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99 desc.setHandler(handler);
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100 addFieldDescriptor(desc);
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102 //-- validation code for: _colour
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103 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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105 IntegerValidator typeValidator= new IntegerValidator();
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106 fieldValidator.setValidator(typeValidator);
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108 desc.setValidator(fieldValidator);
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110 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_start", "start", org.exolab.castor.xml.NodeType.Attribute);
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111 handler = (new org.exolab.castor.xml.XMLFieldHandler() {
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112 public java.lang.Object getValue( java.lang.Object object )
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113 throws IllegalStateException
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115 JSeq target = (JSeq) object;
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116 if(!target.hasStart())
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118 return new java.lang.Integer(target.getStart());
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120 public void setValue( java.lang.Object object, java.lang.Object value)
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121 throws IllegalStateException, IllegalArgumentException
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124 JSeq target = (JSeq) object;
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125 // ignore null values for non optional primitives
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126 if (value == null) return;
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128 target.setStart( ((java.lang.Integer)value).intValue());
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130 catch (java.lang.Exception ex) {
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131 throw new IllegalStateException(ex.toString());
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134 public java.lang.Object newInstance( java.lang.Object parent ) {
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138 desc.setHandler(handler);
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139 desc.setRequired(true);
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140 addFieldDescriptor(desc);
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142 //-- validation code for: _start
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143 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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144 fieldValidator.setMinOccurs(1);
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146 IntegerValidator typeValidator= new IntegerValidator();
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147 fieldValidator.setValidator(typeValidator);
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149 desc.setValidator(fieldValidator);
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151 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_end", "end", org.exolab.castor.xml.NodeType.Attribute);
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152 handler = (new org.exolab.castor.xml.XMLFieldHandler() {
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153 public java.lang.Object getValue( java.lang.Object object )
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154 throws IllegalStateException
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156 JSeq target = (JSeq) object;
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157 if(!target.hasEnd())
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159 return new java.lang.Integer(target.getEnd());
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161 public void setValue( java.lang.Object object, java.lang.Object value)
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162 throws IllegalStateException, IllegalArgumentException
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165 JSeq target = (JSeq) object;
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166 // ignore null values for non optional primitives
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167 if (value == null) return;
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169 target.setEnd( ((java.lang.Integer)value).intValue());
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171 catch (java.lang.Exception ex) {
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172 throw new IllegalStateException(ex.toString());
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175 public java.lang.Object newInstance( java.lang.Object parent ) {
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179 desc.setHandler(handler);
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180 desc.setRequired(true);
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181 addFieldDescriptor(desc);
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183 //-- validation code for: _end
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184 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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185 fieldValidator.setMinOccurs(1);
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187 IntegerValidator typeValidator= new IntegerValidator();
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188 fieldValidator.setValidator(typeValidator);
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190 desc.setValidator(fieldValidator);
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192 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_id", "id", org.exolab.castor.xml.NodeType.Attribute);
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193 handler = (new org.exolab.castor.xml.XMLFieldHandler() {
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194 public java.lang.Object getValue( java.lang.Object object )
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195 throws IllegalStateException
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197 JSeq target = (JSeq) object;
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198 if(!target.hasId())
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200 return new java.lang.Integer(target.getId());
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202 public void setValue( java.lang.Object object, java.lang.Object value)
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203 throws IllegalStateException, IllegalArgumentException
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206 JSeq target = (JSeq) object;
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207 // ignore null values for non optional primitives
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208 if (value == null) return;
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210 target.setId( ((java.lang.Integer)value).intValue());
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212 catch (java.lang.Exception ex) {
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213 throw new IllegalStateException(ex.toString());
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216 public java.lang.Object newInstance( java.lang.Object parent ) {
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220 desc.setHandler(handler);
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221 desc.setRequired(true);
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222 addFieldDescriptor(desc);
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224 //-- validation code for: _id
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225 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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226 fieldValidator.setMinOccurs(1);
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228 IntegerValidator typeValidator= new IntegerValidator();
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229 fieldValidator.setValidator(typeValidator);
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231 desc.setValidator(fieldValidator);
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233 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_hidden", "hidden", org.exolab.castor.xml.NodeType.Attribute);
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234 handler = (new org.exolab.castor.xml.XMLFieldHandler() {
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235 public java.lang.Object getValue( java.lang.Object object )
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236 throws IllegalStateException
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238 JSeq target = (JSeq) object;
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239 if(!target.hasHidden())
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241 return (target.getHidden() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE);
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243 public void setValue( java.lang.Object object, java.lang.Object value)
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244 throws IllegalStateException, IllegalArgumentException
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247 JSeq target = (JSeq) object;
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248 // if null, use delete method for optional primitives
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249 if (value == null) {
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250 target.deleteHidden();
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253 target.setHidden( ((java.lang.Boolean)value).booleanValue());
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255 catch (java.lang.Exception ex) {
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256 throw new IllegalStateException(ex.toString());
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259 public java.lang.Object newInstance( java.lang.Object parent ) {
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263 desc.setHandler(handler);
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264 addFieldDescriptor(desc);
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266 //-- validation code for: _hidden
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267 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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269 BooleanValidator typeValidator = new BooleanValidator();
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270 fieldValidator.setValidator(typeValidator);
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272 desc.setValidator(fieldValidator);
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273 //-- initialize element descriptors
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276 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Features.class, "_featuresList", "features", org.exolab.castor.xml.NodeType.Element);
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277 handler = (new org.exolab.castor.xml.XMLFieldHandler() {
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278 public java.lang.Object getValue( java.lang.Object object )
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279 throws IllegalStateException
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281 JSeq target = (JSeq) object;
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282 return target.getFeatures();
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284 public void setValue( java.lang.Object object, java.lang.Object value)
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285 throws IllegalStateException, IllegalArgumentException
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288 JSeq target = (JSeq) object;
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289 target.addFeatures( (jalview.schemabinding.version2.Features) value);
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291 catch (java.lang.Exception ex) {
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292 throw new IllegalStateException(ex.toString());
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295 public java.lang.Object newInstance( java.lang.Object parent ) {
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296 return new jalview.schemabinding.version2.Features();
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299 desc.setHandler(handler);
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300 desc.setNameSpaceURI("www.jalview.org");
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301 desc.setMultivalued(true);
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302 addFieldDescriptor(desc);
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304 //-- validation code for: _featuresList
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305 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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306 fieldValidator.setMinOccurs(0);
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309 desc.setValidator(fieldValidator);
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311 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Pdbids.class, "_pdbidsList", "pdbids", org.exolab.castor.xml.NodeType.Element);
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312 handler = (new org.exolab.castor.xml.XMLFieldHandler() {
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313 public java.lang.Object getValue( java.lang.Object object )
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314 throws IllegalStateException
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316 JSeq target = (JSeq) object;
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317 return target.getPdbids();
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319 public void setValue( java.lang.Object object, java.lang.Object value)
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320 throws IllegalStateException, IllegalArgumentException
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323 JSeq target = (JSeq) object;
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324 target.addPdbids( (jalview.schemabinding.version2.Pdbids) value);
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326 catch (java.lang.Exception ex) {
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327 throw new IllegalStateException(ex.toString());
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330 public java.lang.Object newInstance( java.lang.Object parent ) {
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331 return new jalview.schemabinding.version2.Pdbids();
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334 desc.setHandler(handler);
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335 desc.setNameSpaceURI("www.jalview.org");
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336 desc.setMultivalued(true);
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337 addFieldDescriptor(desc);
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339 //-- validation code for: _pdbidsList
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340 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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341 fieldValidator.setMinOccurs(0);
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344 desc.setValidator(fieldValidator);
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345 //-- _hiddenSequencesList
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346 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_hiddenSequencesList", "hiddenSequences", org.exolab.castor.xml.NodeType.Element);
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347 handler = (new org.exolab.castor.xml.XMLFieldHandler() {
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348 public java.lang.Object getValue( java.lang.Object object )
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349 throws IllegalStateException
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351 JSeq target = (JSeq) object;
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352 return target.getHiddenSequences();
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354 public void setValue( java.lang.Object object, java.lang.Object value)
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355 throws IllegalStateException, IllegalArgumentException
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358 JSeq target = (JSeq) object;
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359 // ignore null values for non optional primitives
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360 if (value == null) return;
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362 target.addHiddenSequences( ((java.lang.Integer)value).intValue());
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364 catch (java.lang.Exception ex) {
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365 throw new IllegalStateException(ex.toString());
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368 public java.lang.Object newInstance( java.lang.Object parent ) {
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372 desc.setHandler(handler);
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373 desc.setNameSpaceURI("www.jalview.org");
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374 desc.setMultivalued(true);
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375 addFieldDescriptor(desc);
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377 //-- validation code for: _hiddenSequencesList
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378 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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379 fieldValidator.setMinOccurs(0);
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381 IntegerValidator typeValidator= new IntegerValidator();
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382 fieldValidator.setValidator(typeValidator);
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384 desc.setValidator(fieldValidator);
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385 } //-- jalview.schemabinding.version2.JSeqDescriptor()
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393 * Method getAccessMode
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397 * @return AccessMode
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399 public org.exolab.castor.mapping.AccessMode getAccessMode()
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402 } //-- org.exolab.castor.mapping.AccessMode getAccessMode()
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405 * Method getExtends
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409 * @return ClassDescriptor
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411 public org.exolab.castor.mapping.ClassDescriptor getExtends()
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414 } //-- org.exolab.castor.mapping.ClassDescriptor getExtends()
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417 * Method getIdentity
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421 * @return FieldDescriptor
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423 public org.exolab.castor.mapping.FieldDescriptor getIdentity()
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426 } //-- org.exolab.castor.mapping.FieldDescriptor getIdentity()
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429 * Method getJavaClass
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435 public java.lang.Class getJavaClass()
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437 return jalview.schemabinding.version2.JSeq.class;
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438 } //-- java.lang.Class getJavaClass()
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441 * Method getNameSpacePrefix
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447 public java.lang.String getNameSpacePrefix()
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450 } //-- java.lang.String getNameSpacePrefix()
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453 * Method getNameSpaceURI
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459 public java.lang.String getNameSpaceURI()
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462 } //-- java.lang.String getNameSpaceURI()
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465 * Method getValidator
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469 * @return TypeValidator
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471 public org.exolab.castor.xml.TypeValidator getValidator()
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474 } //-- org.exolab.castor.xml.TypeValidator getValidator()
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477 * Method getXMLName
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483 public java.lang.String getXMLName()
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486 } //-- java.lang.String getXMLName()
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