2 * Jalview - A Sequence Alignment Editor and Viewer (Development Version 2.4.1)
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3 * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
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5 * This program is free software; you can redistribute it and/or
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6 * modify it under the terms of the GNU General Public License
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7 * as published by the Free Software Foundation; either version 2
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8 * of the License, or (at your option) any later version.
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10 * This program is distributed in the hope that it will be useful,
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11 * but WITHOUT ANY WARRANTY; without even the implied warranty of
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12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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13 * GNU General Public License for more details.
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15 * You should have received a copy of the GNU General Public License
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16 * along with this program; if not, write to the Free Software
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17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
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19 package jalview.schemabinding.version2;
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21 //---------------------------------/
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22 //- Imported classes and packages -/
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23 //---------------------------------/
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25 import org.exolab.castor.xml.Marshaller;
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26 import org.exolab.castor.xml.Unmarshaller;
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29 * Class JalviewModel.
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31 * @version $Revision$ $Date$
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33 public class JalviewModel implements java.io.Serializable {
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36 //--------------------------/
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37 //- Class/Member Variables -/
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38 //--------------------------/
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41 * Field _creationDate.
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43 private java.util.Date _creationDate;
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48 private java.lang.String _version;
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51 * Field _vamsasModel.
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53 private jalview.schemabinding.version2.VamsasModel _vamsasModel;
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56 * Field _jalviewModelSequence.
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58 private jalview.schemabinding.version2.JalviewModelSequence _jalviewModelSequence;
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65 public JalviewModel() {
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75 * Returns the value of field 'creationDate'.
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77 * @return the value of field 'CreationDate'.
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79 public java.util.Date getCreationDate(
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81 return this._creationDate;
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85 * Returns the value of field 'jalviewModelSequence'.
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87 * @return the value of field 'JalviewModelSequence'.
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89 public jalview.schemabinding.version2.JalviewModelSequence getJalviewModelSequence(
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91 return this._jalviewModelSequence;
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95 * Returns the value of field 'vamsasModel'.
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97 * @return the value of field 'VamsasModel'.
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99 public jalview.schemabinding.version2.VamsasModel getVamsasModel(
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101 return this._vamsasModel;
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105 * Returns the value of field 'version'.
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107 * @return the value of field 'Version'.
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109 public java.lang.String getVersion(
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111 return this._version;
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117 * @return true if this object is valid according to the schema
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119 public boolean isValid(
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123 } catch (org.exolab.castor.xml.ValidationException vex) {
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133 * @throws org.exolab.castor.xml.MarshalException if object is
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134 * null or if any SAXException is thrown during marshaling
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135 * @throws org.exolab.castor.xml.ValidationException if this
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136 * object is an invalid instance according to the schema
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138 public void marshal(
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139 final java.io.Writer out)
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140 throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {
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141 Marshaller.marshal(this, out);
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148 * @throws java.io.IOException if an IOException occurs during
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150 * @throws org.exolab.castor.xml.ValidationException if this
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151 * object is an invalid instance according to the schema
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152 * @throws org.exolab.castor.xml.MarshalException if object is
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153 * null or if any SAXException is thrown during marshaling
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155 public void marshal(
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156 final org.xml.sax.ContentHandler handler)
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157 throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {
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158 Marshaller.marshal(this, handler);
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162 * Sets the value of field 'creationDate'.
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164 * @param creationDate the value of field 'creationDate'.
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166 public void setCreationDate(
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167 final java.util.Date creationDate) {
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168 this._creationDate = creationDate;
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172 * Sets the value of field 'jalviewModelSequence'.
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174 * @param jalviewModelSequence the value of field
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175 * 'jalviewModelSequence'.
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177 public void setJalviewModelSequence(
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178 final jalview.schemabinding.version2.JalviewModelSequence jalviewModelSequence) {
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179 this._jalviewModelSequence = jalviewModelSequence;
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183 * Sets the value of field 'vamsasModel'.
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185 * @param vamsasModel the value of field 'vamsasModel'.
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187 public void setVamsasModel(
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188 final jalview.schemabinding.version2.VamsasModel vamsasModel) {
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189 this._vamsasModel = vamsasModel;
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193 * Sets the value of field 'version'.
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195 * @param version the value of field 'version'.
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197 public void setVersion(
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198 final java.lang.String version) {
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199 this._version = version;
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203 * Method unmarshal.
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206 * @throws org.exolab.castor.xml.MarshalException if object is
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207 * null or if any SAXException is thrown during marshaling
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208 * @throws org.exolab.castor.xml.ValidationException if this
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209 * object is an invalid instance according to the schema
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210 * @return the unmarshaled
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211 * jalview.schemabinding.version2.JalviewModel
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213 public static jalview.schemabinding.version2.JalviewModel unmarshal(
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214 final java.io.Reader reader)
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215 throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {
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216 return (jalview.schemabinding.version2.JalviewModel) Unmarshaller.unmarshal(jalview.schemabinding.version2.JalviewModel.class, reader);
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222 * @throws org.exolab.castor.xml.ValidationException if this
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223 * object is an invalid instance according to the schema
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225 public void validate(
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227 throws org.exolab.castor.xml.ValidationException {
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228 org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();
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229 validator.validate(this);
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