2 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
3 * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
5 * This file is part of Jalview.
7 * Jalview is free software: you can redistribute it and/or
8 * modify it under the terms of the GNU General Public License
9 * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
11 * Jalview is distributed in the hope that it will be useful, but
12 * WITHOUT ANY WARRANTY; without even the implied warranty
13 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
14 * PURPOSE. See the GNU General Public License for more details.
16 * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
18 package jalview.schemabinding.version2;
20 //---------------------------------/
21 //- Imported classes and packages -/
22 //---------------------------------/
24 import org.exolab.castor.xml.Marshaller;
25 import org.exolab.castor.xml.Unmarshaller;
30 * @version $Revision$ $Date$
32 public class JalviewModel implements java.io.Serializable
35 // --------------------------/
36 // - Class/Member Variables -/
37 // --------------------------/
40 * Field _creationDate.
42 private java.util.Date _creationDate;
47 private java.lang.String _version;
52 private jalview.schemabinding.version2.VamsasModel _vamsasModel;
55 * Field _jalviewModelSequence.
57 private jalview.schemabinding.version2.JalviewModelSequence _jalviewModelSequence;
73 * Returns the value of field 'creationDate'.
75 * @return the value of field 'CreationDate'.
77 public java.util.Date getCreationDate()
79 return this._creationDate;
83 * Returns the value of field 'jalviewModelSequence'.
85 * @return the value of field 'JalviewModelSequence'.
87 public jalview.schemabinding.version2.JalviewModelSequence getJalviewModelSequence()
89 return this._jalviewModelSequence;
93 * Returns the value of field 'vamsasModel'.
95 * @return the value of field 'VamsasModel'.
97 public jalview.schemabinding.version2.VamsasModel getVamsasModel()
99 return this._vamsasModel;
103 * Returns the value of field 'version'.
105 * @return the value of field 'Version'.
107 public java.lang.String getVersion()
109 return this._version;
115 * @return true if this object is valid according to the schema
117 public boolean isValid()
122 } catch (org.exolab.castor.xml.ValidationException vex)
133 * @throws org.exolab.castor.xml.MarshalException
134 * if object is null or if any SAXException is thrown during
136 * @throws org.exolab.castor.xml.ValidationException
137 * if this object is an invalid instance according to the schema
139 public void marshal(final java.io.Writer out)
140 throws org.exolab.castor.xml.MarshalException,
141 org.exolab.castor.xml.ValidationException
143 Marshaller.marshal(this, out);
150 * @throws java.io.IOException
151 * if an IOException occurs during marshaling
152 * @throws org.exolab.castor.xml.ValidationException
153 * if this object is an invalid instance according to the schema
154 * @throws org.exolab.castor.xml.MarshalException
155 * if object is null or if any SAXException is thrown during
158 public void marshal(final org.xml.sax.ContentHandler handler)
159 throws java.io.IOException,
160 org.exolab.castor.xml.MarshalException,
161 org.exolab.castor.xml.ValidationException
163 Marshaller.marshal(this, handler);
167 * Sets the value of field 'creationDate'.
169 * @param creationDate
170 * the value of field 'creationDate'.
172 public void setCreationDate(final java.util.Date creationDate)
174 this._creationDate = creationDate;
178 * Sets the value of field 'jalviewModelSequence'.
180 * @param jalviewModelSequence
181 * the value of field 'jalviewModelSequence'.
183 public void setJalviewModelSequence(
184 final jalview.schemabinding.version2.JalviewModelSequence jalviewModelSequence)
186 this._jalviewModelSequence = jalviewModelSequence;
190 * Sets the value of field 'vamsasModel'.
193 * the value of field 'vamsasModel'.
195 public void setVamsasModel(
196 final jalview.schemabinding.version2.VamsasModel vamsasModel)
198 this._vamsasModel = vamsasModel;
202 * Sets the value of field 'version'.
205 * the value of field 'version'.
207 public void setVersion(final java.lang.String version)
209 this._version = version;
216 * @throws org.exolab.castor.xml.MarshalException
217 * if object is null or if any SAXException is thrown during
219 * @throws org.exolab.castor.xml.ValidationException
220 * if this object is an invalid instance according to the schema
221 * @return the unmarshaled jalview.schemabinding.version2.JalviewModel
223 public static jalview.schemabinding.version2.JalviewModel unmarshal(
224 final java.io.Reader reader)
225 throws org.exolab.castor.xml.MarshalException,
226 org.exolab.castor.xml.ValidationException
228 return (jalview.schemabinding.version2.JalviewModel) Unmarshaller
229 .unmarshal(jalview.schemabinding.version2.JalviewModel.class,
236 * @throws org.exolab.castor.xml.ValidationException
237 * if this object is an invalid instance according to the schema
239 public void validate() throws org.exolab.castor.xml.ValidationException
241 org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();
242 validator.validate(this);