src/jalview/schemabinding/version2/SequenceSetDescriptor.java

   1 /*\r
   2  * This class was automatically generated with \r
   3  * <a href="http://www.castor.org">Castor 0.9.6</a>, using an XML\r
   4  * Schema.\r
   5  * $Id$\r
   6  */\r
   7 \r
   8 package jalview.schemabinding.version2;\r
   9 \r
  10   //---------------------------------/\r
  11  //- Imported classes and packages -/\r
  12 //---------------------------------/\r
  13 \r
  14 import org.exolab.castor.mapping.AccessMode;\r
  15 import org.exolab.castor.xml.TypeValidator;\r
  16 import org.exolab.castor.xml.XMLFieldDescriptor;\r
  17 import org.exolab.castor.xml.validators.*;\r
  18 \r
  19 /**\r
  20  * Class SequenceSetDescriptor.\r
  21  * \r
  22  * @version $Revision$ $Date$\r
  23  */\r
  24 public class SequenceSetDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {\r
  25 \r
  26 \r
  27       //--------------------------/\r
  28      //- Class/Member Variables -/\r
  29     //--------------------------/\r
  30 \r
  31     /**\r
  32      * Field nsPrefix\r
  33      */\r
  34     private java.lang.String nsPrefix;\r
  35 \r
  36     /**\r
  37      * Field nsURI\r
  38      */\r
  39     private java.lang.String nsURI;\r
  40 \r
  41     /**\r
  42      * Field xmlName\r
  43      */\r
  44     private java.lang.String xmlName;\r
  45 \r
  46     /**\r
  47      * Field identity\r
  48      */\r
  49     private org.exolab.castor.xml.XMLFieldDescriptor identity;\r
  50 \r
  51 \r
  52       //----------------/\r
  53      //- Constructors -/\r
  54     //----------------/\r
  55 \r
  56     public SequenceSetDescriptor() {\r
  57         super();\r
  58         nsURI = "www.vamsas.ac.uk/jalview/version2";\r
  59         xmlName = "SequenceSet";\r
  60         \r
  61         //-- set grouping compositor\r
  62         setCompositorAsSequence();\r
  63         org.exolab.castor.xml.util.XMLFieldDescriptorImpl  desc           = null;\r
  64         org.exolab.castor.xml.XMLFieldHandler              handler        = null;\r
  65         org.exolab.castor.xml.FieldValidator               fieldValidator = null;\r
  66         //-- initialize attribute descriptors\r
  67         \r
  68         //-- _gapChar\r
  69         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_gapChar", "gapChar", org.exolab.castor.xml.NodeType.Attribute);\r
  70         desc.setImmutable(true);\r
  71         handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
  72             public java.lang.Object getValue( java.lang.Object object ) \r
  73                 throws IllegalStateException\r
  74             {\r
  75                 SequenceSet target = (SequenceSet) object;\r
  76                 return target.getGapChar();\r
  77             }\r
  78             public void setValue( java.lang.Object object, java.lang.Object value) \r
  79                 throws IllegalStateException, IllegalArgumentException\r
  80             {\r
  81                 try {\r
  82                     SequenceSet target = (SequenceSet) object;\r
  83                     target.setGapChar( (java.lang.String) value);\r
  84                 }\r
  85                 catch (java.lang.Exception ex) {\r
  86                     throw new IllegalStateException(ex.toString());\r
  87                 }\r
  88             }\r
  89             public java.lang.Object newInstance( java.lang.Object parent ) {\r
  90                 return null;\r
  91             }\r
  92         } );\r
  93         desc.setHandler(handler);\r
  94         desc.setRequired(true);\r
  95         addFieldDescriptor(desc);\r
  96         \r
  97         //-- validation code for: _gapChar\r
  98         fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
  99         fieldValidator.setMinOccurs(1);\r
 100         { //-- local scope\r
 101             StringValidator typeValidator = new StringValidator();\r
 102             typeValidator.setWhiteSpace("preserve");\r
 103             fieldValidator.setValidator(typeValidator);\r
 104         }\r
 105         desc.setValidator(fieldValidator);\r
 106         //-- initialize element descriptors\r
 107         \r
 108         //-- _sequenceList\r
 109         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Sequence.class, "_sequenceList", "Sequence", org.exolab.castor.xml.NodeType.Element);\r
 110         handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
 111             public java.lang.Object getValue( java.lang.Object object ) \r
 112                 throws IllegalStateException\r
 113             {\r
 114                 SequenceSet target = (SequenceSet) object;\r
 115                 return target.getSequence();\r
 116             }\r
 117             public void setValue( java.lang.Object object, java.lang.Object value) \r
 118                 throws IllegalStateException, IllegalArgumentException\r
 119             {\r
 120                 try {\r
 121                     SequenceSet target = (SequenceSet) object;\r
 122                     target.addSequence( (jalview.schemabinding.version2.Sequence) value);\r
 123                 }\r
 124                 catch (java.lang.Exception ex) {\r
 125                     throw new IllegalStateException(ex.toString());\r
 126                 }\r
 127             }\r
 128             public java.lang.Object newInstance( java.lang.Object parent ) {\r
 129                 return new jalview.schemabinding.version2.Sequence();\r
 130             }\r
 131         } );\r
 132         desc.setHandler(handler);\r
 133         desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");\r
 134         desc.setMultivalued(true);\r
 135         addFieldDescriptor(desc);\r
 136         \r
 137         //-- validation code for: _sequenceList\r
 138         fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
 139         fieldValidator.setMinOccurs(0);\r
 140         { //-- local scope\r
 141         }\r
 142         desc.setValidator(fieldValidator);\r
 143         //-- _annotationList\r
 144         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Annotation.class, "_annotationList", "Annotation", org.exolab.castor.xml.NodeType.Element);\r
 145         handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
 146             public java.lang.Object getValue( java.lang.Object object ) \r
 147                 throws IllegalStateException\r
 148             {\r
 149                 SequenceSet target = (SequenceSet) object;\r
 150                 return target.getAnnotation();\r
 151             }\r
 152             public void setValue( java.lang.Object object, java.lang.Object value) \r
 153                 throws IllegalStateException, IllegalArgumentException\r
 154             {\r
 155                 try {\r
 156                     SequenceSet target = (SequenceSet) object;\r
 157                     target.addAnnotation( (jalview.schemabinding.version2.Annotation) value);\r
 158                 }\r
 159                 catch (java.lang.Exception ex) {\r
 160                     throw new IllegalStateException(ex.toString());\r
 161                 }\r
 162             }\r
 163             public java.lang.Object newInstance( java.lang.Object parent ) {\r
 164                 return new jalview.schemabinding.version2.Annotation();\r
 165             }\r
 166         } );\r
 167         desc.setHandler(handler);\r
 168         desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");\r
 169         desc.setMultivalued(true);\r
 170         addFieldDescriptor(desc);\r
 171         \r
 172         //-- validation code for: _annotationList\r
 173         fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
 174         fieldValidator.setMinOccurs(0);\r
 175         { //-- local scope\r
 176         }\r
 177         desc.setValidator(fieldValidator);\r
 178         //-- _sequenceSetPropertiesList\r
 179         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.SequenceSetProperties.class, "_sequenceSetPropertiesList", "sequenceSetProperties", org.exolab.castor.xml.NodeType.Element);\r
 180         handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
 181             public java.lang.Object getValue( java.lang.Object object ) \r
 182                 throws IllegalStateException\r
 183             {\r
 184                 SequenceSet target = (SequenceSet) object;\r
 185                 return target.getSequenceSetProperties();\r
 186             }\r
 187             public void setValue( java.lang.Object object, java.lang.Object value) \r
 188                 throws IllegalStateException, IllegalArgumentException\r
 189             {\r
 190                 try {\r
 191                     SequenceSet target = (SequenceSet) object;\r
 192                     target.addSequenceSetProperties( (jalview.schemabinding.version2.SequenceSetProperties) value);\r
 193                 }\r
 194                 catch (java.lang.Exception ex) {\r
 195                     throw new IllegalStateException(ex.toString());\r
 196                 }\r
 197             }\r
 198             public java.lang.Object newInstance( java.lang.Object parent ) {\r
 199                 return new jalview.schemabinding.version2.SequenceSetProperties();\r
 200             }\r
 201         } );\r
 202         desc.setHandler(handler);\r
 203         desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");\r
 204         desc.setMultivalued(true);\r
 205         addFieldDescriptor(desc);\r
 206         \r
 207         //-- validation code for: _sequenceSetPropertiesList\r
 208         fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
 209         fieldValidator.setMinOccurs(0);\r
 210         { //-- local scope\r
 211         }\r
 212         desc.setValidator(fieldValidator);\r
 213     } //-- jalview.schemabinding.version2.SequenceSetDescriptor()\r
 214 \r
 215 \r
 216       //-----------/\r
 217      //- Methods -/\r
 218     //-----------/\r
 219 \r
 220     /**\r
 221      * Method getAccessMode\r
 222      * \r
 223      * \r
 224      * \r
 225      * @return AccessMode\r
 226      */\r
 227     public org.exolab.castor.mapping.AccessMode getAccessMode()\r
 228     {\r
 229         return null;\r
 230     } //-- org.exolab.castor.mapping.AccessMode getAccessMode() \r
 231 \r
 232     /**\r
 233      * Method getExtends\r
 234      * \r
 235      * \r
 236      * \r
 237      * @return ClassDescriptor\r
 238      */\r
 239     public org.exolab.castor.mapping.ClassDescriptor getExtends()\r
 240     {\r
 241         return null;\r
 242     } //-- org.exolab.castor.mapping.ClassDescriptor getExtends() \r
 243 \r
 244     /**\r
 245      * Method getIdentity\r
 246      * \r
 247      * \r
 248      * \r
 249      * @return FieldDescriptor\r
 250      */\r
 251     public org.exolab.castor.mapping.FieldDescriptor getIdentity()\r
 252     {\r
 253         return identity;\r
 254     } //-- org.exolab.castor.mapping.FieldDescriptor getIdentity() \r
 255 \r
 256     /**\r
 257      * Method getJavaClass\r
 258      * \r
 259      * \r
 260      * \r
 261      * @return Class\r
 262      */\r
 263     public java.lang.Class getJavaClass()\r
 264     {\r
 265         return jalview.schemabinding.version2.SequenceSet.class;\r
 266     } //-- java.lang.Class getJavaClass() \r
 267 \r
 268     /**\r
 269      * Method getNameSpacePrefix\r
 270      * \r
 271      * \r
 272      * \r
 273      * @return String\r
 274      */\r
 275     public java.lang.String getNameSpacePrefix()\r
 276     {\r
 277         return nsPrefix;\r
 278     } //-- java.lang.String getNameSpacePrefix() \r
 279 \r
 280     /**\r
 281      * Method getNameSpaceURI\r
 282      * \r
 283      * \r
 284      * \r
 285      * @return String\r
 286      */\r
 287     public java.lang.String getNameSpaceURI()\r
 288     {\r
 289         return nsURI;\r
 290     } //-- java.lang.String getNameSpaceURI() \r
 291 \r
 292     /**\r
 293      * Method getValidator\r
 294      * \r
 295      * \r
 296      * \r
 297      * @return TypeValidator\r
 298      */\r
 299     public org.exolab.castor.xml.TypeValidator getValidator()\r
 300     {\r
 301         return this;\r
 302     } //-- org.exolab.castor.xml.TypeValidator getValidator() \r
 303 \r
 304     /**\r
 305      * Method getXMLName\r
 306      * \r
 307      * \r
 308      * \r
 309      * @return String\r
 310      */\r
 311     public java.lang.String getXMLName()\r
 312     {\r
 313         return xmlName;\r
 314     } //-- java.lang.String getXMLName() \r
 315 \r
 316 }\r